View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7829A_low_332 (Length: 247)

Name: NF7829A_low_332
Description: NF7829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7829A_low_332
NF7829A_low_332
[»] chr8 (3 HSPs)
chr8 (52-224)||(1735317-1735489)
chr8 (19-224)||(17422857-17423062)
chr8 (19-222)||(22348769-22348972)
[»] chr3 (5 HSPs)
chr3 (19-224)||(14693229-14693434)
chr3 (43-236)||(10782167-10782360)
chr3 (22-209)||(10150777-10150964)
chr3 (31-220)||(7401993-7402182)
chr3 (49-209)||(13306894-13307054)
[»] chr7 (3 HSPs)
chr7 (19-184)||(18133578-18133743)
chr7 (49-224)||(14342659-14342834)
chr7 (24-209)||(18171652-18171837)
[»] scaffold0319 (1 HSPs)
scaffold0319 (19-224)||(9626-9831)
[»] scaffold0022 (1 HSPs)
scaffold0022 (19-209)||(11347-11537)
[»] chr2 (4 HSPs)
chr2 (19-209)||(23200647-23200837)
chr2 (19-209)||(22638304-22638494)
chr2 (19-209)||(23626276-23626466)
chr2 (19-206)||(24911884-24912070)
[»] chr4 (2 HSPs)
chr4 (19-209)||(13289385-13289575)
chr4 (19-224)||(14772570-14772775)
[»] chr6 (2 HSPs)
chr6 (19-215)||(23435091-23435287)
chr6 (19-224)||(19035181-19035386)
[»] scaffold0130 (1 HSPs)
scaffold0130 (19-209)||(43131-43321)
[»] scaffold0016 (2 HSPs)
scaffold0016 (19-209)||(126577-126767)
scaffold0016 (70-206)||(179311-179447)
[»] scaffold0040 (1 HSPs)
scaffold0040 (19-209)||(29608-29798)
[»] scaffold0241 (1 HSPs)
scaffold0241 (19-224)||(11460-11665)
[»] scaffold0108 (1 HSPs)
scaffold0108 (19-224)||(26194-26399)
[»] scaffold0001 (1 HSPs)
scaffold0001 (19-224)||(126763-126968)
[»] chr1 (2 HSPs)
chr1 (19-224)||(22805841-22806046)
chr1 (19-136)||(41380414-41380531)
[»] chr5 (1 HSPs)
chr5 (19-224)||(21510976-21511181)
[»] scaffold0282 (1 HSPs)
scaffold0282 (19-206)||(5559-5746)
[»] scaffold0005 (1 HSPs)
scaffold0005 (19-224)||(66955-67160)
[»] scaffold0064 (1 HSPs)
scaffold0064 (22-224)||(37596-37798)
[»] scaffold0656 (1 HSPs)
scaffold0656 (19-206)||(5028-5214)
[»] scaffold0026 (1 HSPs)
scaffold0026 (19-209)||(138991-139181)
[»] scaffold0023 (2 HSPs)
scaffold0023 (19-157)||(65238-65376)
scaffold0023 (19-157)||(74416-74554)
[»] scaffold0019 (1 HSPs)
scaffold0019 (19-206)||(159086-159273)
[»] scaffold0107 (1 HSPs)
scaffold0107 (19-167)||(1844-1992)
[»] scaffold0013 (4 HSPs)
scaffold0013 (70-206)||(75405-75541)
scaffold0013 (112-206)||(83876-83970)
scaffold0013 (112-206)||(121548-121642)
scaffold0013 (151-206)||(148842-148897)
[»] scaffold0046 (1 HSPs)
scaffold0046 (98-224)||(33613-33739)
[»] scaffold0362 (1 HSPs)
scaffold0362 (56-224)||(14463-14631)
[»] scaffold0053 (1 HSPs)
scaffold0053 (112-206)||(42285-42379)


Alignment Details
Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 52 - 224
Target Start/End: Original strand, 1735317 - 1735489
Alignment:
Q  52 cagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggaga 151  Q
    ||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  1735317 cagaaagctgtgttcgagatggttaagaagccagcaacagaacgaatttcacccccattgtcaattctgaagaaagatcattcaaaagaagacgaggaga 1735416  T
Q  152 tgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtgga 224  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  1735417 tgacttcaaatttcacggaatctgacccaagtcttgacatagtctgtaatgtggtttccatcttgcctgtgga 1735489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 224
Target Start/End: Complemental strand, 17423062 - 17422857
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| ||||||||   ||||  ||||||||||  ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||      
T  17423062 gacatcaccaatgttgacaaaacggaggataagcagaaagaggtgttcgaaatggttaagaaaccagcaacagagagaatctcacccccattgtcaatct 17422963  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc 218  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||| || || ||||||||||||||||||||||| ||| | ||    
T  17422962 tgaagaaagatcatcccaaagaggatgaggagatgacttcgaatttcacgggatctgacccgagcctcgacatagtttgcaatgtggtttctatcctacc 17422863  T
Q  219 tgtgga 224  Q
    ||||||    
T  17422862 tgtgga 17422857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 222
Target Start/End: Complemental strand, 22348972 - 22348769
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| |||||||||   | ||||||||||||| |||||||||||||||||| |||||||||| |||| |||| ||||||||||||||||||     
T  22348972 gacatcaccaatgttgacaaagggaaaggcaagcagaaagttgtgttcgaaatggttaaaaaaccagcaatagagagaatctcacccccattgtcaattt 22348873  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc 218  Q
    | |||||||||||| ||||||| ||||| || ||||||||||||||||  | ||||||||| |||||||| || || |||||||||||||| ||| | ||    
T  22348872 taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcattggatctgaccccagtcttgatatcgtatgcaatgtggtttcgatcctacc 22348773  T
Q  219 tgtg 222  Q
    ||||    
T  22348772 tgtg 22348769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 224
Target Start/End: Complemental strand, 14693434 - 14693229
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||||||||||||   |||| |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||      
T  14693434 gacatcaccaatattgacaaaacggaggacaagcagaaagccgtgttcgaaatggttaaaaaaccagcaacagagagaatttcacccccattgtcaatct 14693335  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc 218  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| ||||||||    
T  14693334 tgaagaaagaccattccaaagaggataaggagatgacttcaaatttcacggaatctgacccaaacctcgacatagtttgcaatgtggtttctatcttgcc 14693235  T
Q  219 tgtgga 224  Q
    ||||||    
T  14693234 tgtgga 14693229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 43 - 236
Target Start/End: Original strand, 10782167 - 10782360
Alignment:
Q  43 gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaag 142  Q
    |||| |||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||||||||| | |||||||    
T  10782167 gaggacaagcagaaagctgtgtttgagatggttaagaagccagcaacagagcgaatttcgcccccattgtcgattctgatgaaagatcatccaaaagaag 10782266  T
Q  143 atgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggataatgatgtcca 236  Q
    ||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||  ||||||||||    
T  10782267 atgaggaaatgacttcgaatttcacagaatctgacccaagtcttgacatagtttgtaatgtggtttccattttgcctgtggaatatgatgtcca 10782360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 22 - 209
Target Start/End: Original strand, 10150777 - 10150964
Alignment:
Q  22 atcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctga 121  Q
    ||||||||| ||||||||| |||||||||||  |||| |||||||||||||||||| |||||||  |||||| |||| |||||||||||||||||| |||    
T  10150777 atcaccaatgttgacaaaggagagggcaagcgaaaagatgtgttcgaaatggttaaaaaaccagtcacagagagaatctcacccccattgtcaattttga 10150876  T
Q  122 agaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc 209  Q
    ||||||||||| ||||||| ||||| || ||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||||||    
T  10150877 agaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtcttgacatagtatgcaatgtggtttc 10150964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 31 - 220
Target Start/End: Complemental strand, 7402182 - 7401993
Alignment:
Q  31 attgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatc 130  Q
    ||||||||| | ||||  || |||||||||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||| |||||||  ||     
T  7402182 attgacaaaatggaggataaacagaaagctgtgttcgaaatggttaagaaggcagcaacagaaagaatttcacccccattgtcaattttgaagaagtatt 7402083  T
Q  131 attccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctg 220  Q
     ||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| ||| ||||||    
T  7402082 gttccaaagaggatgaggagatgacttcaaatttcacggaatgtgacccgagtctcgacatagtttgcaatgtggtttcaatcctgcctg 7401993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 49 - 209
Target Start/End: Complemental strand, 13307054 - 13306894
Alignment:
Q  49 aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgagg 148  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||| ||||||| ||||| |    
T  13307054 aagcagaaaactgtgttcgaaatggttaagaaaccagcaacagagagaatctcacccccattgtcaattttgaagaaagatcatcccaaagaggatgaag 13306955  T
Q  149 agatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc 209  Q
    | |||||||| |||||||||| ||||||||| ||||| || ||||||||||||||||||||    
T  13306954 atatgacttcgaatttcacgggatctgaccctagtctcgatatagtttgcaatgtggtttc 13306894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 18133743 - 18133578
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||||||||||||   ||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18133743 gacatcaccaatattgacaaaagggagggcaagcaaaaagttgtgttcgagatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 18133644  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtc 184  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18133643 tgaagaaagatcgttccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtc 18133578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 49 - 224
Target Start/End: Complemental strand, 14342834 - 14342659
Alignment:
Q  49 aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgagg 148  Q
    |||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||||||||  ||||||||| |||||||    
T  14342834 aagcagaaagctgtgttcgaaatggttaagaaaccagcaacaaaaagaatttcacccccattgtcaattttgaagaaagattgttccaaagaggatgagg 14342735  T
Q  149 agatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtgga 224  Q
    ||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| ||| ||||||||||    
T  14342734 agatgacttcaaatttcacggaatctgacccgagcctcgacatagtttgcaatgtggtttcaatcctgcctgtgga 14342659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 24 - 209
Target Start/End: Complemental strand, 18171837 - 18171652
Alignment:
Q  24 caccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaag 123  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||  |||||    
T  18171837 caccaatgttgacaaaggagagggtaagcagaaagctgtgttcgaaatggttaaaaaaccagcaacagaaagaatttcgcccccattgtcaatcttgaag 18171738  T
Q  124 aaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc 209  Q
    ||||||||| |||| || ||||| || |||||||| |||||||| | ||||||||| ||||| |||||||| | ||||||||||||    
T  18171737 aaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtacaatgtggtttc 18171652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 224
Target Start/End: Original strand, 9626 - 9831
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| || |||||||||||| |||| ||||||||||||||||||     
T  9626 gacatcaccaatgttgacaaaggagagggtaagcagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcacccccattgtcaattt 9725  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc 218  Q
    | |||||||| ||| ||||||| ||||| || ||||||||||||||||| | ||||||||| ||||| |||||||| |||||||||||||| ||| | ||    
T  9726 taaagaaagaacatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccctagtctcgacatagtatgcaatgtggtttctatcctacc 9825  T
Q  219 tgtgga 224  Q
    ||||||    
T  9826 tgtgga 9831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 11347 - 11537
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| ||||||||  |||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| || |||||||||||||||     
T  11347 gacatcaccaatgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaaaaaaccagcaacagagagaatctcgcccccattgtcaattt 11446  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc 209  Q
    | |||||||||||| ||||||| ||||| || ||||||||||||||||| ||||||||||| |||||  ||||||| ||||||||||||||    
T  11447 taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactgaatctgaccctagtctcaacatagtatgcaatgtggtttc 11537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 23200837 - 23200647
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| ||||||||  |||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||     
T  23200837 gacatcaccaatgttgacaaaacagagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattt 23200738  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc 209  Q
    |||||||||||||| ||||||| ||||| || |||||||| |||||||||| ||||||||| ||||| || ||||| ||||||||||||||    
T  23200737 tgaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcacgggatctgaccctagtctcgatatagtgtgcaatgtggtttc 23200647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 22638304 - 22638494
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    ||||||||| || |||| |||  |||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||     
T  22638304 gacatcaccgatgttgataaaacagagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattt 22638403  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc 209  Q
    |||||||||||||| ||||||| ||||| || |||||||| |||||||| | ||||||||| ||||| |||||||| ||||||||||||||    
T  22638404 tgaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttc 22638494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 23626466 - 23626276
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| ||||||||  |||||| |||||||||||||||||| |||||||||||||||||||||||||| |||| || ||||||||||||||      
T  23626466 gacatcaccaatgttgacaaaacagagggtaagcagaaagctgtgttcaaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaatat 23626367  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc 209  Q
    |||| ||||||||| |||| || ||||  || |||||||| |||||||| | ||||||||| ||||| |||||||| ||||||||||||||    
T  23626366 tgaaaaaagatcatcccaaggaggatgtagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttc 23626276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 24911884 - 24912070
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    ||||||||||||||||||||||   | || ||||||| |||||| |||||||||||||| |||||||||||| || ||||||||||||| ||||||||      
T  24911884 gacatcaccaatattgacaaagggaaaggaaagcagagagctgttttcgaaatggttaaaaaaccagcaacaaagagaatttcaccccc-ttgtcaatct 24911982  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt 206  Q
    | ||||| || ||| ||||||| ||||| || ||||||||||||||||| | ||||||||| ||||| |||||||| |||||||||||    
T  24911983 taaagaaggaccatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtctcgacatagtatgcaatgtggt 24912070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 13289575 - 13289385
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| || |||||||||||| |||| || |||||||||||||||     
T  13289575 gacatcaccaatgttgacaaaggagagggtaagcagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcgcccccattgtcaattt 13289476  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc 209  Q
    | |||||||||||| ||||||| ||||| || |||||||| |||||||| | ||||||||| ||||| |||||||| ||||||||||||||    
T  13289475 taaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaatgtggtttc 13289385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 224
Target Start/End: Complemental strand, 14772775 - 14772570
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| |||||||||   | || || |||| |||||| |||||||||||||| ||||||||||||||| |||| |||||||||||||||||||    
T  14772775 gacatcaccaatgttgacaaagggaaaggaaaacagagagctgtattcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattc 14772676  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc 218  Q
    | |||||||||||| ||||||| ||||| || ||||||||||||||||| | ||||||||| ||||| || ||||| ||||||||||| || ||| | ||    
T  14772675 taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtctcgatatagtatgcaatgtggtctcgatcctacc 14772576  T
Q  219 tgtgga 224  Q
    ||||||    
T  14772575 tgtgga 14772570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 23435091 - 23435287
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| ||||||||  |||||| |||||||| | ||||||||||||||||||||||||||||| |||| |||| || |||||||||||||||     
T  23435091 gacatcaccaatgttgacaaaacagagggtaagcagaaggttgtgttcgaaatggttaagaaaccagcaatagagagaatctcgcccccattgtcaattt 23435190  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatctt 215  Q
    |||||||||||||| |||| || ||||| || |||||||| |||||||||| ||||||||| ||||| |||||||| |||||||||||||| |||||    
T  23435191 tgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcacgggatctgaccctagtctcgacatagtgtgcaatgtggtttctatctt 23435287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 224
Target Start/End: Complemental strand, 19035386 - 19035181
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| ||||||||| |||||||||||| |||||| |||||||||| ||||| ||||||||||||||| |||| ||| | ||||||||||||     
T  19035386 gacatcaccaatgttgacaaaggagagggcaagcaaaaagctatgttcgaaatagttaaaaaaccagcaacagagagaatctcatctccattgtcaattt 19035287  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc 218  Q
    |||||||| || || ||||| | ||||| || |||||||| |||||||| | ||||||||| |||||||| ||  | ||||||||||| || ||| | ||    
T  19035286 tgaagaaaaataatcccaaaaaggatgaagaaatgacttcgaatttcactggatctgaccccagtcttgatattatatgcaatgtggtctcgatcctacc 19035187  T
Q  219 tgtgga 224  Q
    ||||||    
T  19035186 tgtgga 19035181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 43131 - 43321
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| |||| |||  |||||| |||||||||||||||||| |||||||||||||||||||||||||| |||| || |||||||||||||||     
T  43131 gacatcaccaatgttgataaaacagagggtaagcagaaagctgtgttcaaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattt 43230  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc 209  Q
    |||||||||||||| |||| || ||||| ||  ||||||| |||||||||| ||||||||| ||||| |||||||| ||||||||||||||    
T  43231 tgaagaaagatcatcccaaggaggatgaagaactgacttcgaatttcacgggatctgaccctagtctcgacatagtgtgcaatgtggtttc 43321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 126767 - 126577
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    ||||||||| || |||| |||  |||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||     
T  126767 gacatcaccgatgttgataaaacagagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattt 126668  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc 209  Q
    |||||||||||||| ||||||| ||||| || |||||||| |||||||| | ||||||||| ||||| || ||||| ||||||||||||||    
T  126667 tgaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgatatagtgtgcaatgtggtttc 126577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 206
Target Start/End: Complemental strand, 179447 - 179311
Alignment:
Q  70 atggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacgg 169  Q
    |||||||| ||| |||| |||||  |||| || || || ||||||||| |||||||||| ||| | ||||| ||||| || ||||| || |||||| |      
T  179447 atggttaaaaaatcagccacagaaagaatctcccctcctttgtcaattttgaagaaagaccatcctaaagaggatgaagaaatgacgtcgaatttctcca 179348  T
Q  170 aatctgacccaagtcttgacatagtttgcaatgtggt 206  Q
    | |||||||||||  | || ||||| |||||||||||    
T  179347 agtctgacccaagcttcgatatagtgtgcaatgtggt 179311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 29608 - 29798
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||||||||||||  | |||||||||| |||| |||||||||||||||||| |||||||| | |||| |||| |||||||| |||||||||     
T  29608 gacatcaccaatattgacaaaagaaagggcaagcaaaaagatgtgttcgaaatggttaaaaaaccagccatagagagaatctcacccccgttgtcaattt 29707  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc 209  Q
    |||||||||||||| ||||||| ||||| || ||||| ||| ||||||| | ||||||||| || || |||||||| ||||||||||||||    
T  29708 tgaagaaagatcatcccaaagaggatgaagaaatgacctcagatttcaccggatctgaccccagcctagacatagtatgcaatgtggtttc 29798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 224
Target Start/End: Original strand, 11460 - 11665
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| | |||||||   | || || ||||||||||| |||||||||||||| ||||||||||||||| |||| ||||||||||||||||||     
T  11460 gacatcaccaatgtagacaaagggaaaggaaaacagaaagctgtattcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaatta 11559  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc 218  Q
    | |||||||||||| ||||||| ||||| || ||||||||||||||||| | ||||||||| |||||||| || || ||||||||||| || ||| | ||    
T  11560 taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtcttgatatcgtatgcaatgtggtctcaatcctacc 11659  T
Q  219 tgtgga 224  Q
    ||||||    
T  11660 tgtgga 11665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 224
Target Start/End: Original strand, 26194 - 26399
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| ||||||||| |||||  || |||||||||||||||||||||||||| || |||||||||||| |||| ||||||||||||||||||     
T  26194 gacatcaccaatgttgacaaaggagaggataaacagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcacccccattgtcaattt 26293  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc 218  Q
    ||||||||||   |  ||| || ||||| ||||||||||| |||||||| | ||||||||| ||||| |||||||| ||||| ||||| |||||| | ||    
T  26294 tgaagaaagactctctcaaggaggatgaagagatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaacgtggtgtccatcctacc 26393  T
Q  219 tgtgga 224  Q
    ||||||    
T  26394 tgtgga 26399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 224
Target Start/End: Complemental strand, 126968 - 126763
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||| ||||| |||||||||   |||| ||||||||||| ||||||||||||||||| |||||| |||||||| |||| ||||||||||||| ||||     
T  126968 gacatctccaatgttgacaaagggaagggaaagcagaaagcggtgttcgaaatggttaaaaaaccaacaacagagagaatctcacccccattgtgaattt 126869  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc 218  Q
    | |||||||||||| |||| || ||||| || ||||||||||||||||||| ||||||||| |||||||| || || ||||||||||| || ||| | ||    
T  126868 taaagaaagatcatcccaatgaggatgaagaaatgacttcaaatttcacgggatctgaccccagtcttgatatcgtatgcaatgtggtctcgatcctacc 126769  T
Q  219 tgtgga 224  Q
    ||||||    
T  126768 tgtgga 126763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 224
Target Start/End: Complemental strand, 22806046 - 22805841
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| |||||||||   | || ||||||| |||||| || ||||||||||| ||||||||||||||| |||| |||||||||||||||||||    
T  22806046 gacatcaccaatgttgacaaagggaaaggaaagcagagagctgtatttgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattc 22805947  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc 218  Q
    | |||||||||||| ||||||| ||||| || ||||||||||||||||| | ||||||||| | ||| || ||||| ||||||||||| || ||| | ||    
T  22805946 taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccaatctcgatatagtatgcaatgtggtctcaatcctacc 22805847  T
Q  219 tgtgga 224  Q
    ||||||    
T  22805846 tgtgga 22805841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 41380531 - 41380414
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||| |||||| ||||||||  | |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||     
T  41380531 gacaccaccaacattgacaagatggagggcaagcagaaagctgtgttcgagatggttaagaagccagcaacagagcgaatttcacccccattgtcaattt 41380432  T
Q  119 tgaagaaagatcattcca 136  Q
    ||||||||||||||||||    
T  41380431 tgaagaaagatcattcca 41380414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 224
Target Start/End: Original strand, 21510976 - 21511181
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||| ||||| |||||||||   | || ||||||||||| ||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||     
T  21510976 gacatctccaatgttgacaaagggaaaggaaagcagaaagcggtgttcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattt 21511075  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc 218  Q
    | |||||||||||| |||| || ||||| || ||||||||||||||||| | ||||||||| |||||||| ||  | ||||||||||| || ||||| |     
T  21511076 taaagaaagatcatcccaaggaggatgaagaaatgacttcaaatttcactggatctgaccccagtcttgatatcatatgcaatgtggtctcgatcttact 21511175  T
Q  219 tgtgga 224  Q
    ||||||    
T  21511176 tgtgga 21511181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 206
Target Start/End: Complemental strand, 5746 - 5559
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| |||||||||   | || ||||||| || ||| || ||||||||| | ||||||||||||||| |||| |||||||||||||||||||    
T  5746 gacatcaccaatgttgacaaagggaaaggaaagcagagagttgtatttgaaatggtttaaaaaccagcaacagagagaatctcacccccattgtcaattc 5647  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt 206  Q
    | |||||||||||| ||||||| ||||| || ||||||||||||||||| | ||||||||| ||||| || ||||| |||||||||||    
T  5646 taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtctcgatatagtatgcaatgtggt 5559  T

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Target: scaffold0005 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 224
Target Start/End: Original strand, 66955 - 67160
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| |||||||||   | || || |||| || ||| || ||||||||| | ||||||||||||||| |||| |||||||||||||||||||    
T  66955 gacatcaccaatgttgacaaagggaaaggaaatcagagagttgtatttgaaatggtttaaaaaccagcaacagagagaatctcacccccattgtcaattc 67054  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc 218  Q
    | |||||||||||| ||||||| ||||| || ||||||||||||||||| | ||||||||| ||||| || ||||| ||||||||||| || ||| | ||    
T  67055 taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtctcgatatagtatgcaatgtggtctcaatcctacc 67154  T
Q  219 tgtgga 224  Q
    ||||||    
T  67155 tgtgga 67160  T

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Target: scaffold0064 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 22 - 224
Target Start/End: Complemental strand, 37798 - 37596
Alignment:
Q  22 atcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctga 121  Q
    ||||||||| ||| ||||| |||||  || |||||||||||||||||||||||||| || ||||||||| || ||||||||||||||||||||||| |||    
T  37798 atcaccaattttgtcaaaggagaggttaaacagaaagctgtgttcgaaatggttaaaaagccagcaacatagagaatttcacccccattgtcaattttga 37699  T
Q  122 agaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgt 221  Q
    |||||||   | |||| || ||||| || |||||||| |||||||| | ||||||||| ||||| |||||||| || || ||||| || ||| | |||||    
T  37698 agaaagactttcccaaggaggatgaagatatgacttcgaatttcactggatctgaccctagtctcgacatagtatgtaacgtggtgtctatcctacctgt 37599  T
Q  222 gga 224  Q
    |||    
T  37598 gga 37596  T

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Target: scaffold0656 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0656
Description:

Target: scaffold0656; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 5028 - 5214
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||||||||||||| | |||| ||||| | |||||| |||||||||||||| || |||||||||||| |||| |||||||| ||||||||      
T  5028 gacatcaccaatattgacaaaggaaaggg-aagcaaatagctgttttcgaaatggttaaaaagccagcaacagagagaatctcaccccccttgtcaatct 5126  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt 206  Q
    | |||||||| ||| |||| || ||||| || |||||||| |||||||| | ||||||||  ||||| |||||||| |||||||||||    
T  5127 taaagaaagaccatcccaaggaggatgaagaaatgacttcgaatttcactggatctgacctcagtctcgacatagtatgcaatgtggt 5214  T

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Target: scaffold0026 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 139181 - 138991
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| |||||||||   | || ||||||| |||||| |||||||||||||| |||||||||||| || | || ||||| || ||||||||      
T  139181 gacatcaccaatgttgacaaagggaaaggaaagcagagagctgtattcgaaatggttaaaaaaccagcaacaaagaggatctcacctcccttgtcaatct 139082  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc 209  Q
    | |||||||| ||| ||||||| ||||| || |||||||| |||||||| |  |||||||| ||||| |||||||| ||||||||||||||    
T  139081 taaagaaagaccatcccaaagaggatgaagaaatgacttcgaatttcactgggtctgaccctagtctcgacatagtatgcaatgtggtttc 138991  T

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Target: scaffold0023 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 65238 - 65376
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| |||||||||   | |  |||||||||| |||||||||||||||||| ||||||||||||||| |||| | ||||||||||||||||     
T  65238 gacatcaccaatgttgacaaagggaaagtaaagcagaaagttgtgttcgaaatggttaaaaaaccagcaacagagagaatctaacccccattgtcaattt 65337  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgactt 157  Q
    | |||||||||||| ||||||| ||||| || |||||||    
T  65338 taaagaaagatcatcccaaagaggatgaagaaatgactt 65376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 74416 - 74554
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| |||||||||   | |  |||||||||| |||||||||||||||||| ||||||||||||||| |||| | ||||||||||||||||     
T  74416 gacatcaccaatgttgacaaagggaaagtaaagcagaaagttgtgttcgaaatggttaaaaaaccagcaacagagagaatctaacccccattgtcaattt 74515  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgactt 157  Q
    | |||||||||||| ||||||| ||||| || |||||||    
T  74516 taaagaaagatcatcccaaagaggatgaagaaatgactt 74554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 206
Target Start/End: Complemental strand, 159273 - 159086
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    ||||||||||||||||||||||   | || ||||||||||| || || ||||||||||| || |||||||||||  |||| ||||| || || |||||      
T  159273 gacatcaccaatattgacaaagggaaagggaagcagaaagccgtttttgaaatggttaaaaagccagcaacagaaagaatctcaccgcccttatcaatct 159174  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt 206  Q
    |||||||| | ||| |||| || ||||| || |||||||| |||||||| | ||||||||| ||||| |||||||| |||||||||||    
T  159173 tgaagaaaaaccatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaatgtggt 159086  T

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Target: scaffold0107 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 1844 - 1992
Alignment:
Q  19 gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc 118  Q
    |||||||||||| |||||||||   | || ||||||| |||||| |||||||||||||| ||||||||||||||| |||| |||||||| ||||||||      
T  1844 gacatcaccaatgttgacaaagggaaaggaaagcagagagctgttttcgaaatggttaaaaaaccagcaacagagagaatctcaccccccttgtcaatct 1943  T
Q  119 tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcac 167  Q
    | |||||||| ||| ||||  | ||||| || |||||||| ||||||||    
T  1944 taaagaaagaccatcccaagtaggatgaagaaatgacttcgaatttcac 1992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 45; Significance: 9e-17; HSPs: 4)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 206
Target Start/End: Original strand, 75405 - 75541
Alignment:
Q  70 atggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacgg 169  Q
    |||||||| |||||||| || ||  |||| || || || || |||||| |||||||||| ||| | ||||| ||||| || ||||| ||||||||||| |    
T  75405 atggttaaaaaaccagccacggaaagaatctcccctcctttatcaattttgaagaaagaccatcctaaagaggatgaagaaatgacgtcaaatttcacag 75504  T
Q  170 aatctgacccaagtcttgacatagtttgcaatgtggt 206  Q
    |||||||| ||||||| || ||||| |||||||||||    
T  75505 aatctgactcaagtctcgatatagtatgcaatgtggt 75541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 83876 - 83970
Alignment:
Q  112 tcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt 206  Q
    |||||| |||||||||| ||| | ||||| |||||  | ||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||    
T  83876 tcaattttgaagaaagaccatactaaagaggatgaaaaaatgacgtcaaatttcacagaatctgacccaagtctcgatatagtatgcaatgtggt 83970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 121548 - 121642
Alignment:
Q  112 tcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt 206  Q
    |||||| |||||||||| ||| | ||||| |||||  | ||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||    
T  121548 tcaattttgaagaaagaccatactaaagaggatgaaaaaatgacgtcaaatttcacagaatctgacccaagtctcgatatagtatgcaatgtggt 121642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 148842 - 148897
Alignment:
Q  151 atgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt 206  Q
    ||||| |||||||||||  |||||||||||||||| || ||||| |||||||||||    
T  148842 atgacgtcaaatttcacaaaatctgacccaagtctcgatatagtatgcaatgtggt 148897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 224
Target Start/End: Original strand, 33613 - 33739
Alignment:
Q  98 tttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttg 197  Q
    ||||||| || || |||||  |||||||||| ||| ||||||| ||||| || |||||||| |||||||  | ||||||||| ||||| |||||||| ||    
T  33613 tttcacctcccttatcaatcttgaagaaagaccatcccaaagaggatgaagaaatgacttcgaatttcattggatctgaccccagtctcgacatagtgtg 33712  T
Q  198 caatgtggtttccatcttgcctgtgga 224  Q
    ||||||||| ||  | |||||||||||    
T  33713 caatgtggtgtcagttttgcctgtgga 33739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 224
Target Start/End: Original strand, 14463 - 14631
Alignment:
Q  56 aagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggagatgac 155  Q
    ||||||| |||||||||||||| |||||||| || ||  |||| || || || || |||||| |||||| ||||||| | || || ||||| || |||||    
T  14463 aagctgttttcgaaatggttaaaaaaccagccacggaaagaatctcccctcccttatcaattttgaagagagatcatcctaaggaggatgaagaaatgac 14562  T
Q  156 ttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtgga 224  Q
    ||| |||||||| | |||| |||| ||||| || ||| | |||||||| || ||  | |||||||||||    
T  14563 ttcgaatttcactggatctaaccccagtctcgatataatatgcaatgtcgtgtcagttttgcctgtgga 14631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 42379 - 42285
Alignment:
Q  112 tcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt 206  Q
    |||||| |||||||| ||||| | || || ||||| || ||||| || |||||||| |||||||| |||||||| || ||||| |||||||||||    
T  42379 tcaattttgaagaaaaatcatcctaaggaggatgaagaaatgacgtcgaatttcactgaatctgatccaagtctcgatatagtgtgcaatgtggt 42285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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