View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7829A_low_386 (Length: 239)
Name: NF7829A_low_386
Description: NF7829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7829A_low_386 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 3249148 - 3248944
Alignment:
| Q |
19 |
atcaaggctgggaataggtaaggaaactatttttatctacaagtgattttacatgcattaaattgtttatctaaacagtgccaatgtgttttacagacaa |
118 |
Q |
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| T |
3249148 |
atcaaggctgggaataggtaaggaaactatttttatctacaagtgattttacatgcattaaattgtttatctaaacagtgccaatgtgttttacagacaa |
3249049 |
T |
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| Q |
119 |
atgatgcaggcataactggaatagcgtaaacttatcgacattgtcgcgaatgatggactccattaagggagacattcgacacatattaacttctgacttc |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
3249048 |
atgatgcaggcataactggaatagcgtaaacttatcgacattgtcgcgaatgatggactccattaagggcgacattcgacacatattaacttctgacttt |
3248949 |
T |
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| Q |
219 |
atctc |
223 |
Q |
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||||| |
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| T |
3248948 |
atctc |
3248944 |
T |
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