View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7829A_low_489 (Length: 225)
Name: NF7829A_low_489
Description: NF7829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7829A_low_489 |
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Alignment Details
Target: chr5 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 957503 - 957316
Alignment:
| Q |
21 |
atcagcatctatcggtcgtatctgtatcaatatcatctgaaagagaattggtcccatctgacaacggggttcagcctaccgaagattgtccccagccaat |
120 |
Q |
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| T |
957503 |
atcagcatctatcggtcgtatctgtatcaatatcatctgaaagagaattggtcccatctgacaacggggttcagcctaccgaagattgtccccagccaat |
957404 |
T |
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| Q |
121 |
agcttacatggctactgaagatttcaatcaaaatagccccaaaaagaaaaggtaagcgaagttgtcgattatcctgctttatgcttga |
208 |
Q |
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| T |
957403 |
agcttacatggctactgaagatttcaatcagaatagccccaaaaagaaaaggtaagcgaagttgtcgattatcctgctttatgcttga |
957316 |
T |
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