View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7829A_low_57 (Length: 408)
Name: NF7829A_low_57
Description: NF7829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7829A_low_57 |
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Alignment Details
Target: chr7 (Bit Score: 365; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 21 - 393
Target Start/End: Original strand, 32363777 - 32364149
Alignment:
| Q |
21 |
tcattccagttcctttggcacctcgacgcagtacaataccttgaaagagatagactggatttggtagagtctgcataaaaaggtagtgcaaaagaatgtg |
120 |
Q |
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| T |
32363777 |
tcattccagttcctttggcacctcgacgcagtacaataccttgaaagagatagactggatttggtagagtctgcataaaaaggtagtgcaaaagaatgtg |
32363876 |
T |
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| Q |
121 |
gataaactaactctaggaagtatacaatggcaaccatcttcatcaaatttatataccaaaaggcatcaaataaatatctatcaaagaacaaattctcacc |
220 |
Q |
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| T |
32363877 |
gataaactaactctaggaagtatacaatggcaaccatcttcatcaaatttatataccaaaaggcatcaaataaatatctatcaaagaacagattctcacc |
32363976 |
T |
|
| Q |
221 |
tttataactgcattgatttctctgtgtgtcagactttttattatgagtacctcatcatctgcaaaataacaaaattaatttactcatttaataaatgtaa |
320 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32363977 |
tttataactgcattgatttctctgtgtgtcagactttttattatgagtacctcatcatctgcaaaataacaaaattaatttactcatttaataaatgtaa |
32364076 |
T |
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| Q |
321 |
acactagatttctagttgagtgaaattctagatttctagttacacgggatagggaacctatctatcagttgat |
393 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
32364077 |
acactagatttctagttgagtgaaattctagatttctagttacacgggatagggaacctatctaccagttgat |
32364149 |
T |
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