View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7829A_low_98 (Length: 361)

Name: NF7829A_low_98
Description: NF7829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7829A_low_98
NF7829A_low_98
[»] chr6 (17 HSPs)
chr6 (7-337)||(19162825-19163165)
chr6 (299-337)||(33549146-33549184)
chr6 (298-337)||(9626074-9626113)
chr6 (298-337)||(12234502-12234541)
chr6 (294-337)||(13227149-13227192)
chr6 (298-337)||(28841456-28841495)
chr6 (302-337)||(30127442-30127477)
chr6 (303-337)||(10338174-10338208)
chr6 (300-334)||(12216789-12216823)
chr6 (300-337)||(23910108-23910145)
chr6 (301-338)||(34444844-34444881)
chr6 (301-337)||(346572-346608)
chr6 (298-334)||(6385907-6385943)
chr6 (309-337)||(13661562-13661590)
chr6 (301-337)||(16405127-16405163)
chr6 (301-337)||(24641188-24641224)
chr6 (309-337)||(31622997-31623025)
[»] chr3 (38 HSPs)
chr3 (280-338)||(21960592-21960650)
chr3 (299-337)||(10445135-10445173)
chr3 (301-337)||(47454615-47454651)
chr3 (298-337)||(4844506-4844545)
chr3 (298-337)||(4870202-4870241)
chr3 (298-337)||(14186689-14186728)
chr3 (298-337)||(44743850-44743889)
chr3 (298-337)||(51903873-51903912)
chr3 (299-337)||(36720423-36720461)
chr3 (299-337)||(37788461-37788499)
chr3 (300-337)||(30311348-30311385)
chr3 (300-337)||(33899656-33899693)
chr3 (300-337)||(52769980-52770017)
chr3 (298-338)||(20501737-20501777)
chr3 (294-337)||(2597211-2597254)
chr3 (298-337)||(31520600-31520639)
chr3 (299-337)||(2667904-2667942)
chr3 (299-337)||(3427549-3427587)
chr3 (299-337)||(16354888-16354926)
chr3 (300-338)||(19154672-19154710)
chr3 (299-337)||(27093357-27093395)
chr3 (299-337)||(27259203-27259241)
chr3 (299-337)||(28703400-28703438)
chr3 (299-337)||(30510195-30510233)
chr3 (299-337)||(31608520-31608558)
chr3 (299-337)||(39253739-39253777)
chr3 (299-337)||(53412987-53413025)
chr3 (305-338)||(9557361-9557394)
chr3 (299-336)||(13808881-13808918)
chr3 (299-336)||(29563943-29563980)
chr3 (304-337)||(45229276-45229309)
chr3 (304-337)||(45308903-45308936)
chr3 (301-337)||(14339652-14339688)
chr3 (301-337)||(17108896-17108932)
chr3 (301-337)||(19716239-19716275)
chr3 (301-337)||(33861732-33861768)
chr3 (301-337)||(49494144-49494180)
chr3 (301-333)||(54990748-54990780)
[»] chr8 (27 HSPs)
chr8 (298-337)||(968404-968443)
chr8 (301-337)||(16852382-16852418)
chr8 (298-337)||(35641896-35641935)
chr8 (302-336)||(11928730-11928764)
chr8 (303-337)||(29858049-29858083)
chr8 (301-338)||(19703485-19703522)
chr8 (299-336)||(33017257-33017294)
chr8 (297-345)||(28540456-28540504)
chr8 (298-337)||(3624622-3624661)
chr8 (301-332)||(18546360-18546391)
chr8 (298-337)||(22193359-22193398)
chr8 (299-338)||(31408118-31408157)
chr8 (300-338)||(3826774-3826812)
chr8 (299-337)||(6536562-6536600)
chr8 (303-337)||(11819818-11819852)
chr8 (299-337)||(23361645-23361683)
chr8 (303-337)||(27750772-27750806)
chr8 (299-336)||(8794341-8794378)
chr8 (300-337)||(11492070-11492107)
chr8 (300-337)||(29431053-29431090)
chr8 (303-336)||(33727873-33727906)
chr8 (299-332)||(35690060-35690093)
chr8 (299-335)||(7140753-7140789)
chr8 (298-338)||(12281535-12281575)
chr8 (302-338)||(18897207-18897243)
chr8 (301-337)||(28783102-28783138)
chr8 (301-337)||(36205237-36205273)
[»] chr1 (36 HSPs)
chr1 (298-337)||(12587312-12587351)
chr1 (300-345)||(7219915-7219960)
chr1 (298-338)||(51814535-51814575)
chr1 (298-336)||(2220015-2220053)
chr1 (299-337)||(2799904-2799942)
chr1 (299-337)||(3265966-3266004)
chr1 (299-337)||(33700769-33700807)
chr1 (300-337)||(15786317-15786354)
chr1 (299-335)||(17745252-17745288)
chr1 (301-337)||(19528325-19528361)
chr1 (298-338)||(26232356-26232396)
chr1 (298-337)||(12370205-12370244)
chr1 (298-337)||(16893436-16893475)
chr1 (298-337)||(17439959-17439998)
chr1 (302-337)||(38947471-38947506)
chr1 (299-338)||(44961806-44961845)
chr1 (298-345)||(51281385-51281432)
chr1 (299-337)||(1247155-1247193)
chr1 (299-337)||(4566590-4566628)
chr1 (303-337)||(6122836-6122870)
chr1 (299-337)||(8177178-8177216)
chr1 (299-337)||(8904456-8904494)
chr1 (302-336)||(9117162-9117196)
chr1 (299-333)||(21547476-21547510)
chr1 (299-337)||(36371512-36371550)
chr1 (299-336)||(12662325-12662362)
chr1 (305-338)||(21392878-21392911)
chr1 (301-338)||(25297813-25297850)
chr1 (300-337)||(31383795-31383832)
chr1 (299-336)||(50901625-50901662)
chr1 (298-338)||(9224816-9224856)
chr1 (301-337)||(12259302-12259338)
chr1 (301-337)||(24047100-24047136)
chr1 (301-337)||(43446005-43446041)
chr1 (301-337)||(45266876-45266912)
chr1 (301-337)||(52029935-52029971)
[»] scaffold0299 (1 HSPs)
scaffold0299 (299-337)||(11570-11608)
[»] scaffold0258 (1 HSPs)
scaffold0258 (299-337)||(15319-15357)
[»] chr5 (21 HSPs)
chr5 (299-337)||(16773849-16773887)
chr5 (299-337)||(14285203-14285241)
chr5 (299-337)||(25627099-25627137)
chr5 (299-337)||(43442238-43442276)
chr5 (301-337)||(35360084-35360120)
chr5 (298-337)||(14495800-14495839)
chr5 (294-337)||(25979212-25979255)
chr5 (299-337)||(8779306-8779344)
chr5 (299-337)||(29075823-29075861)
chr5 (299-337)||(29173532-29173570)
chr5 (303-337)||(30109308-30109342)
chr5 (299-337)||(34984848-34984886)
chr5 (299-337)||(37258362-37258400)
chr5 (300-337)||(1410657-1410693)
chr5 (304-333)||(5390853-5390882)
chr5 (301-330)||(17675759-17675788)
chr5 (299-336)||(27841015-27841052)
chr5 (301-337)||(84866-84902)
chr5 (301-337)||(3315257-3315293)
chr5 (309-337)||(4793094-4793122)
chr5 (293-337)||(9842836-9842880)
[»] chr7 (40 HSPs)
chr7 (301-337)||(20335829-20335865)
chr7 (298-338)||(45709703-45709743)
chr7 (298-337)||(7309398-7309437)
chr7 (294-337)||(43215226-43215269)
chr7 (298-336)||(5668566-5668604)
chr7 (299-337)||(26459406-26459444)
chr7 (299-336)||(17041008-17041045)
chr7 (297-338)||(22035439-22035480)
chr7 (301-338)||(29916806-29916843)
chr7 (298-338)||(14058294-14058334)
chr7 (298-338)||(14368322-14368362)
chr7 (301-337)||(22760905-22760941)
chr7 (298-337)||(2446350-2446389)
chr7 (298-337)||(3174969-3175008)
chr7 (299-338)||(11700206-11700245)
chr7 (299-334)||(21558173-21558208)
chr7 (299-337)||(2882992-2883030)
chr7 (299-337)||(2962501-2962539)
chr7 (299-337)||(9871282-9871320)
chr7 (299-337)||(13106778-13106816)
chr7 (299-337)||(15137595-15137633)
chr7 (299-337)||(18363738-18363776)
chr7 (299-337)||(23552160-23552198)
chr7 (299-337)||(41519260-41519298)
chr7 (301-338)||(7499922-7499959)
chr7 (304-337)||(25590653-25590686)
chr7 (300-337)||(29385740-29385777)
chr7 (304-337)||(31835234-31835267)
chr7 (301-338)||(38374597-38374634)
chr7 (304-337)||(48771980-48772013)
chr7 (301-337)||(18056773-18056809)
chr7 (302-338)||(25242037-25242073)
chr7 (300-336)||(30217922-30217958)
chr7 (302-334)||(30301925-30301957)
chr7 (301-337)||(37085547-37085583)
chr7 (301-337)||(37473656-37473692)
chr7 (299-331)||(39631892-39631924)
chr7 (301-337)||(42712000-42712036)
chr7 (301-337)||(43590949-43590985)
chr7 (301-337)||(49050489-49050525)
[»] chr4 (26 HSPs)
chr4 (301-337)||(30938217-30938253)
chr4 (301-337)||(39509112-39509148)
chr4 (298-337)||(49576889-49576928)
chr4 (299-337)||(7949450-7949488)
chr4 (299-337)||(23377998-23378036)
chr4 (299-337)||(37109347-37109385)
chr4 (301-334)||(19229206-19229239)
chr4 (301-338)||(47044758-47044795)
chr4 (301-337)||(19238575-19238611)
chr4 (301-337)||(46295139-46295175)
chr4 (298-337)||(51948522-51948561)
chr4 (299-337)||(2622391-2622429)
chr4 (299-337)||(4249219-4249257)
chr4 (299-337)||(7292794-7292832)
chr4 (299-337)||(12798726-12798764)
chr4 (299-337)||(13015469-13015507)
chr4 (299-337)||(28635738-28635776)
chr4 (299-337)||(37274455-37274493)
chr4 (303-337)||(38869810-38869844)
chr4 (299-337)||(51622527-51622565)
chr4 (301-338)||(15729523-15729560)
chr4 (300-337)||(43623441-43623478)
chr4 (301-337)||(9936959-9936995)
chr4 (301-337)||(32992654-32992690)
chr4 (298-338)||(52254399-52254439)
chr4 (301-337)||(55427198-55427234)
[»] chr2 (26 HSPs)
chr2 (301-337)||(39715034-39715070)
chr2 (299-338)||(33582014-33582053)
chr2 (298-336)||(4262297-4262335)
chr2 (301-338)||(21939121-21939158)
chr2 (299-336)||(33569854-33569891)
chr2 (301-338)||(37480116-37480153)
chr2 (300-337)||(42327392-42327429)
chr2 (301-337)||(29503313-29503349)
chr2 (302-338)||(32687522-32687558)
chr2 (299-338)||(3661004-3661043)
chr2 (298-337)||(7799030-7799069)
chr2 (299-338)||(19244150-19244189)
chr2 (298-337)||(25637193-25637232)
chr2 (300-338)||(7599978-7600016)
chr2 (299-337)||(13803537-13803575)
chr2 (299-337)||(14500319-14500357)
chr2 (303-337)||(21195676-21195710)
chr2 (300-338)||(31573638-31573676)
chr2 (303-337)||(42860390-42860424)
chr2 (299-336)||(11251130-11251167)
chr2 (304-337)||(28846733-28846766)
chr2 (300-344)||(360740-360784)
chr2 (299-335)||(13519048-13519084)
chr2 (301-337)||(19016073-19016109)
chr2 (301-337)||(21213811-21213847)
chr2 (301-337)||(23052521-23052557)
[»] scaffold0194 (1 HSPs)
scaffold0194 (298-337)||(13041-13080)
[»] scaffold0291 (1 HSPs)
scaffold0291 (301-337)||(2468-2504)
[»] scaffold0008 (1 HSPs)
scaffold0008 (298-338)||(49347-49387)
[»] scaffold1367 (1 HSPs)
scaffold1367 (299-334)||(836-871)
[»] scaffold0118 (1 HSPs)
scaffold0118 (299-338)||(41629-41668)
[»] scaffold0238 (1 HSPs)
scaffold0238 (299-337)||(2707-2745)
[»] scaffold0180 (1 HSPs)
scaffold0180 (299-337)||(19958-19996)


Alignment Details
Target: chr6 (Bit Score: 282; Significance: 1e-158; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 7 - 337
Target Start/End: Complemental strand, 19163165 - 19162825
Alignment:
Q  7 gatggacatcatcaataaagcaaagatgttatctggtagctcctgcattcacataattaaagcaaatataagtataaaaaattcttaaaatcgacgcttg 106  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19163165 gatggacatcatcaataaagcaaagacgttatctggtagctcctgcattcacataattaaagcaaatataagtataaaaaattcttaaaatcgatgcttg 19163066  T
Q  107 aaaatcgcttactgttgagtttgtgatcttatcagtattgaatcaacaaaaacatgagaaaagaaataccagttcagttttgaagaatttatatttgttt 206  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19163065 aaaatagcttactgttgagtttgtgatcttatcggtattgaatcaacaaaaacatgagaaaagaaataccagttgagttttgaagaatttatatttgttt 19162966  T
Q  207 cgttgttttttaacaa----------attgagtcatcctttcagtcgtcacgatgagtaagactgtgatattcttttagaaactaaattagcccactcat 296  Q
    ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19162965 cgttgttttttaacaaaccgacactgattgagtcatcctttcagtcgtcacgatgagtaagactgtgatattcttttagaaactaaattagcccactcat 19162866  T
Q  297 aggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  19162865 aggagagaatcgaacctgagatctcgaggaggagcacactc 19162825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 33549184 - 33549146
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33549184 gagagaatcgaacctgagacctcgaggaggagcacactc 33549146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 9626113 - 9626074
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  9626113 ggagagaatcgaacatgagacctcgaggaggagcatactc 9626074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 12234502 - 12234541
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  12234502 ggagagaatcgaacctgagacctcgagagggagcacactc 12234541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 13227149 - 13227192
Alignment:
Q  294 cataggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||    
T  13227149 catatgagagaatcgaacttgagacttcgaggaggagcacactc 13227192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 28841495 - 28841456
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  28841495 ggagagaatcgaacttgagaccttgaggaggagcacactc 28841456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 30127477 - 30127442
Alignment:
Q  302 agaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| |||||||||||||    
T  30127477 agaatcgaacctgagacctcgaagaggagcacactc 30127442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Original strand, 10338174 - 10338208
Alignment:
Q  303 gaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||| ||||||||||||||||    
T  10338174 gaatcgaacctgagaccttgaggaggagcacactc 10338208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 334
Target Start/End: Complemental strand, 12216823 - 12216789
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcaca 334  Q
    ||||||||||||||||||||||||| |||||||||    
T  12216823 agagaatcgaacctgagacctcgagaaggagcaca 12216789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 23910108 - 23910145
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  23910108 agagattcgaacctgagaccttgaggaggagcacactc 23910145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 338
Target Start/End: Complemental strand, 34444881 - 34444844
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||||||||||| | |||||||||||||||    
T  34444881 gagaatcgaacctgagaccttggggaggagcacactct 34444844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 346608 - 346572
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  346608 gagaatcgaacatgagacctcgaggagaagcacactc 346572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Complemental strand, 6385943 - 6385907
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcaca 334  Q
    |||||||||||||||||||||||  ||||||||||||    
T  6385943 ggagagaatcgaacctgagaccttaaggaggagcaca 6385907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 337
Target Start/End: Complemental strand, 13661590 - 13661562
Alignment:
Q  309 aacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||||    
T  13661590 aacctgagacctcgaggaggagcacactc 13661562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 16405163 - 16405127
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||| |||||||||||||||| |||||||||    
T  16405163 gagaatcgaaactgagacctcgaggagaagcacactc 16405127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 24641188 - 24641224
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||| | |||||||||||||||||||||    
T  24641188 gagaatcgaaccttaaacctcgaggaggagcacactc 24641224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 337
Target Start/End: Original strand, 31622997 - 31623025
Alignment:
Q  309 aacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||||    
T  31622997 aacctgagacctcgaggaggagcacactc 31623025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 21960650 - 21960592
Alignment:
Q  280 taaattagcccactcataggagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||||||||||| || | |||||||||||| |||||||||||||||||||||||||||    
T  21960650 taaattagcccacccaaatgagagaatcgaatctgagacctcgaggaggagcacactct 21960592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 10445135 - 10445173
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10445135 gagagaatcgaacctgagacctcgaggaggagcacactc 10445173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 47454615 - 47454651
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||||||||||||    
T  47454615 gagaatcgaacctgagacctcgaggaggagcacactc 47454651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 4844506 - 4844545
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  4844506 ggagagaatcgatcctgagacctcgaggaggagcacactc 4844545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 4870202 - 4870241
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  4870202 ggagagaatcgatcctgagacctcgaggaggagcacactc 4870241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 14186728 - 14186689
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  14186728 ggagagaatcgaacctgagaccttgaggaggagcacactc 14186689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 44743850 - 44743889
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  44743850 ggagataatcgaacctgagacctcgaggaggagcacactc 44743889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 51903873 - 51903912
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  51903873 ggagagaatcgaacctgagaccacgaggaggagcacactc 51903912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 36720461 - 36720423
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  36720461 gagagaatcgaacctgaaacctcgaggaggagcacactc 36720423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 37788461 - 37788499
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  37788461 gagagaatcgaacctgagaccttgaggaggagcacactc 37788499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 30311385 - 30311348
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  30311385 agagaatcgaacctgagaccttgaggaggagcacactc 30311348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 33899693 - 33899656
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  33899693 agagaatcgaacctgagacctagaggaggagcacactc 33899656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 52769980 - 52770017
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| |||||||||||||||    
T  52769980 agagaatcgaacctgagacctcaaggaggagcacactc 52770017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 20501777 - 20501737
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  20501777 ggagagaatcgaacctgagaccttaaggaggagcacactct 20501737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 2597211 - 2597254
Alignment:
Q  294 cataggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||| ||||| |||||||||||||||| |||||||||||||||    
T  2597211 catagtagagattcgaacctgagacctcaaggaggagcacactc 2597254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 31520600 - 31520639
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  31520600 ggagagaatcaaacctaagacctcgaggaggagcacactc 31520639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 2667942 - 2667904
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  2667942 gagataatcgaacctgagacctcgaggaagagcacactc 2667904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 3427549 - 3427587
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  3427549 gagagaatcgaatctgagaccttgaggaggagcacactc 3427587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 16354888 - 16354926
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  16354888 gagagaatcgaacctgagaccctgaggaggagcacactc 16354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 338
Target Start/End: Complemental strand, 19154710 - 19154672
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  19154710 agagaatcgaacctgagacctttaggaggagcacactct 19154672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 27093357 - 27093395
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  27093357 gagagaatcaaacctgagaccttgaggaggagcacactc 27093395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 27259241 - 27259203
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  27259241 gagagaatcaaacctgaaacctcgaggaggagcacactc 27259203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 28703400 - 28703438
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| || |||||||||||||    
T  28703400 gagagaatcgaacctgagaccttgaagaggagcacactc 28703438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 30510195 - 30510233
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  30510195 gagagaatcgaacctgagacctcgagaaggagcatactc 30510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 31608520 - 31608558
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  31608520 gagagaatcaaatctgagacctcgaggaggagcacactc 31608558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 39253777 - 39253739
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| || |||||||||||||    
T  39253777 gagagaatcgaacctgagaccttgaagaggagcacactc 39253739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 53413025 - 53412987
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  53413025 gagagaattgaacctgagaccttgaggaggagcacactc 53412987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 338
Target Start/End: Complemental strand, 9557394 - 9557361
Alignment:
Q  305 atcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||||||||||| ||||||||||||||||||||    
T  9557394 atcgaacctgagatctcgaggaggagcacactct 9557361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 13808881 - 13808918
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacact 336  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  13808881 gagagaattgaacctgagacctagaggaggagcacact 13808918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 29563980 - 29563943
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacact 336  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  29563980 gagagaatcgaacctgagacttcgaggagaagcacact 29563943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 337
Target Start/End: Complemental strand, 45229309 - 45229276
Alignment:
Q  304 aatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||| |||||||||||||||||    
T  45229309 aatcgaacctgagaccacgaggaggagcacactc 45229276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 337
Target Start/End: Original strand, 45308903 - 45308936
Alignment:
Q  304 aatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||||||||||| ||||    
T  45308903 aatcgaacctgagacctcgaggaggagcatactc 45308936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 14339688 - 14339652
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||| | ||||||||||||||||    
T  14339688 gagaatcgaacctgagacattgaggaggagcacactc 14339652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 17108896 - 17108932
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  17108896 gagaatcaaacctgagaccttgaggaggagcacactc 17108932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 19716275 - 19716239
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  19716275 gagaatcgaaccagagaccttgaggaggagcacactc 19716239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 33861732 - 33861768
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||| | |||||||||||||||||||||||    
T  33861732 gagaatcgaacattagacctcgaggaggagcacactc 33861768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 49494144 - 49494180
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  49494144 gagaatcaaacctgagacctcgaggaagagcacactc 49494180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 333
Target Start/End: Complemental strand, 54990780 - 54990748
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcac 333  Q
    |||||||||||||||||||| ||||||||||||    
T  54990780 gagaatcgaacctgagaccttgaggaggagcac 54990748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 968443 - 968404
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  968443 ggagagaatcgaacctgagacctcgaggaggagcacactc 968404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 16852418 - 16852382
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||||||||||||    
T  16852418 gagaatcgaacctgagacctcgaggaggagcacactc 16852382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 35641896 - 35641935
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  35641896 ggagagaatcgaacctgagacatcgaggaggagcacactc 35641935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 11928730 - 11928764
Alignment:
Q  302 agaatcgaacctgagacctcgaggaggagcacact 336  Q
    |||||||||||||||||||||||||||||||||||    
T  11928730 agaatcgaacctgagacctcgaggaggagcacact 11928764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 337
Target Start/End: Original strand, 29858049 - 29858083
Alignment:
Q  303 gaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||||||||||    
T  29858049 gaatcgaacctgagacctcgaggaggagcacactc 29858083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 338
Target Start/End: Original strand, 19703485 - 19703522
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||||||||||| |||||||||||||||||    
T  19703485 gagaatcgaacctgagaccttgaggaggagcacactct 19703522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 33017294 - 33017257
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacact 336  Q
    |||||||||||||||||||||| |||||||||||||||    
T  33017294 gagagaatcgaacctgagaccttgaggaggagcacact 33017257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 28540504 - 28540456
Alignment:
Q  297 aggagagaatcgaacctgagacctcgaggaggagcacactctgatgtcc 345  Q
    |||||||||| ||||||||||||| ||| ||||||||||||| ||||||    
T  28540504 aggagagaattgaacctgagacctagagaaggagcacactctcatgtcc 28540456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 3624661 - 3624622
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  3624661 ggagagaatcgaacctgagaccttgaagaggagcacactc 3624622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 332
Target Start/End: Original strand, 18546360 - 18546391
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagca 332  Q
    ||||||||||||||||||||||||||||||||    
T  18546360 gagaatcgaacctgagacctcgaggaggagca 18546391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 22193359 - 22193398
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  22193359 ggagagaatcgaacctaagaccttgaggaggagcacactc 22193398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 31408118 - 31408157
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  31408118 gagagaatcgaacctgaaaccttgaggaggagcacactct 31408157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 3826774 - 3826812
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  3826774 agagaatcgaacctgagatctcgtggaggagcacactct 3826812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 6536600 - 6536562
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  6536600 gagagaattgaacctgagaccttgaggaggagcacactc 6536562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 11819852 - 11819818
Alignment:
Q  303 gaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||| ||||||||||||||||    
T  11819852 gaatcgaacctgagaccttgaggaggagcacactc 11819818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 23361645 - 23361683
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  23361645 gagagaattgaacctgagaccttgaggaggagcacactc 23361683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 27750806 - 27750772
Alignment:
Q  303 gaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||| ||||||||||||||||    
T  27750806 gaatcgaacctgagaccttgaggaggagcacactc 27750772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 8794341 - 8794378
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacact 336  Q
    |||||||||||||||||||||  |||||||||||||||    
T  8794341 gagagaatcgaacctgagaccctgaggaggagcacact 8794378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 11492070 - 11492107
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  11492070 agagaatcgaacctaagacctcgagaaggagcacactc 11492107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 29431090 - 29431053
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  29431090 agagaatcgaacctgaggcctcaaggaggagcacactc 29431053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 33727873 - 33727906
Alignment:
Q  303 gaatcgaacctgagacctcgaggaggagcacact 336  Q
    |||||||||||||||||| |||||||||||||||    
T  33727873 gaatcgaacctgagaccttgaggaggagcacact 33727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 332
Target Start/End: Original strand, 35690060 - 35690093
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagca 332  Q
    |||||||||||||||||||||| |||||||||||    
T  35690060 gagagaatcgaacctgagaccttgaggaggagca 35690093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 7140789 - 7140753
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacac 335  Q
    |||||||||||| |||||| |||||||||||||||||    
T  7140789 gagagaatcgaatctgagagctcgaggaggagcacac 7140753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 12281575 - 12281535
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||| ||||||| ||||||||||||||||| |||||||||    
T  12281575 ggagaaaatcgaatctgagacctcgaggaggggcacactct 12281535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 18897243 - 18897207
Alignment:
Q  302 agaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||| |||||||| |||||||||||||||||    
T  18897243 agaatcgaacatgagaccttgaggaggagcacactct 18897207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 28783138 - 28783102
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  28783138 gagaatcgaacatgagaccttgaggaggagcacactc 28783102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 36205273 - 36205237
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  36205273 gagaatcgaacatgagaccttgaggaggagcacactc 36205237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 12587351 - 12587312
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12587351 ggagagaatcgaacctgagacctcgaggaggagcacactc 12587312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 345
Target Start/End: Original strand, 7219915 - 7219960
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactctgatgtcc 345  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  7219915 agagaatcgaacctgagacttcgaggaggagcacactctcatgtcc 7219960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 51814575 - 51814535
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  51814575 ggagagaatcgaacctgagaccttgaggaggagcacactct 51814535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 336
Target Start/End: Complemental strand, 2220053 - 2220015
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacact 336  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  2220053 ggagagaatcgaacctgagacctcgaggagaagcacact 2220015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 2799942 - 2799904
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  2799942 gagagaatcgaacctgagaccttgaggaggagcacactc 2799904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 3266004 - 3265966
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  3266004 gagagaatcgaacctgagaccttgaggaggagcacactc 3265966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 33700769 - 33700807
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  33700769 gagagaatcgaacctgagaccttgaggaggagcacactc 33700807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 15786317 - 15786354
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  15786317 agagaatcgaacctgagaccttgaggaggagcacactc 15786354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 17745252 - 17745288
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacac 335  Q
    ||||||||||||| |||||||||||||||||||||||    
T  17745252 gagagaatcgaacatgagacctcgaggaggagcacac 17745288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 19528325 - 19528361
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19528325 gagaatcgaacctgagaccttgaggaggagcacactc 19528361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 26232356 - 26232396
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  26232356 ggagagaattgaacctgagacctcaaggaggagcacactct 26232396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 12370244 - 12370205
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  12370244 ggagagaatcaaacatgagacctcgaggaggagcacactc 12370205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 16893475 - 16893436
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||| ||||||||||||||||||||||||||| ||||||    
T  16893475 ggagaaaatcgaacctgagacctcgaggaggagtacactc 16893436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 17439998 - 17439959
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  17439998 ggagagaatcaaacatgagacctcgaggaggagcacactc 17439959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 38947471 - 38947506
Alignment:
Q  302 agaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||| ||||||||||||||||    
T  38947471 agaatcgaacctgagaccttgaggaggagcacactc 38947506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 44961845 - 44961806
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  44961845 gagagaatcgaacctgagaccctgaggaggagcacactct 44961806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 51281432 - 51281385
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactctgatgtcc 345  Q
    |||||||||| |||||||||||| ||||||||||||||| ||| ||||    
T  51281432 ggagagaatcaaacctgagaccttgaggaggagcacactttgaggtcc 51281385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 1247193 - 1247155
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  1247193 gagagaatcgaacctgagaccttgaggaggagtacactc 1247155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 4566628 - 4566590
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  4566628 gagagaatcgaacctgagaccctgaggaggagcacactc 4566590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 6122870 - 6122836
Alignment:
Q  303 gaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||| ||||||||||||||||    
T  6122870 gaatcgaacctgagaccttgaggaggagcacactc 6122836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 8177178 - 8177216
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  8177178 gagagaatcgaacctgaaaccttgaggaggagcacactc 8177216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 8904494 - 8904456
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  8904494 gagagaatcgaacttgagaccttgaggaggagcacactc 8904456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 9117196 - 9117162
Alignment:
Q  302 agaatcgaacctgagacctcgaggaggagcacact 336  Q
    |||||||||||||||||||| ||||||||||||||    
T  9117196 agaatcgaacctgagacctcaaggaggagcacact 9117162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 333
Target Start/End: Original strand, 21547476 - 21547510
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcac 333  Q
    ||||||||||||||||| |||||||||||||||||    
T  21547476 gagagaatcgaacctgaaacctcgaggaggagcac 21547510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 36371550 - 36371512
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  36371550 gagagaatcgaacctcagaccttgaggaggagcacactc 36371512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 12662362 - 12662325
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacact 336  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  12662362 gagataatcgaacctgagacatcgaggaggagcacact 12662325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 338
Target Start/End: Complemental strand, 21392911 - 21392878
Alignment:
Q  305 atcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||||||| |||||||||||||||||    
T  21392911 atcgaacctgagaccttgaggaggagcacactct 21392878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 338
Target Start/End: Complemental strand, 25297850 - 25297813
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  25297850 gagaatcaaacctcagacctcgaggaggagcacactct 25297813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 31383795 - 31383832
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||| | |||||||||||||||    
T  31383795 agagaatcgaacctgagaccccaaggaggagcacactc 31383832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 50901662 - 50901625
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacact 336  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  50901662 gagagaatcgaatttgagacctcgaggaggagcacact 50901625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 9224856 - 9224816
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||||||||||||||| ||||| |||| |||||    
T  9224856 ggagagaatcgaacctgagacctcaaggagaagcatactct 9224816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 12259338 - 12259302
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  12259338 gagaatcgaacttgagacttcgaggaggagcacactc 12259302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 24047100 - 24047136
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  24047100 gagaatcgaacttgaaacctcgaggaggagcacactc 24047136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 43446041 - 43446005
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  43446041 gagaatcgaacatgagaccttgaggaggagcacactc 43446005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 45266912 - 45266876
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  45266912 gagaatcgaacctgagaccttgaggaggagcaaactc 45266876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 52029935 - 52029971
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  52029935 gagaatcgaacctgagaccttgagaaggagcacactc 52029971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 11608 - 11570
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11608 gagagaatcgaacctgagacctcgaggaggagcacactc 11570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 15319 - 15357
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15319 gagagaatcgaacctgagacctcgaggaggagcacactc 15357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 16773887 - 16773849
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16773887 gagagaatcgaacctgagacctcgaggaggagcacactc 16773849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 14285241 - 14285203
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  14285241 gagagaatcgaacctgagaccttgaggaggagcacactc 14285203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 25627137 - 25627099
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  25627137 gagagaatcgaacctgagaccttgaggaggagcacactc 25627099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 43442276 - 43442238
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  43442276 gagagaatcgaacctgagaccttgaggaggagcacactc 43442238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 35360084 - 35360120
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||||||||| |||||||||    
T  35360084 gagaatcgaacctgagacctcgaggagaagcacactc 35360120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 14495800 - 14495839
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  14495800 ggagagaatcaaatctgagacctcgaggaggagcacactc 14495839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 25979255 - 25979212
Alignment:
Q  294 cataggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||    
T  25979255 cataagagagaatcgaacctgagaccttgaggaggagaacactc 25979212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 8779306 - 8779344
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  8779306 gagataatcgaacctgaaacctcgaggaggagcacactc 8779344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 29075861 - 29075823
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  29075861 gagagaatcgaacatgagatctcgaggaggagcacactc 29075823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 29173570 - 29173532
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  29173570 gagataatcgaacctgaaacctcgaggaggagcacactc 29173532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Original strand, 30109308 - 30109342
Alignment:
Q  303 gaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||| |||||||||||||||    
T  30109308 gaatcgaacctgagacctcaaggaggagcacactc 30109342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 34984886 - 34984848
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  34984886 gagagaatcgaacctaagaccttgaggaggagcacactc 34984848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 37258362 - 37258400
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  37258362 gagagaatcgaacctgaaaccttgaggaggagcacactc 37258400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 1410657 - 1410693
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||| |||||||||||||||||||||||||    
T  1410657 agagaatcgaac-tgagacctcgaggaggagcacactc 1410693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 333
Target Start/End: Original strand, 5390853 - 5390882
Alignment:
Q  304 aatcgaacctgagacctcgaggaggagcac 333  Q
    ||||||||||||||||||||||||||||||    
T  5390853 aatcgaacctgagacctcgaggaggagcac 5390882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 330
Target Start/End: Original strand, 17675759 - 17675788
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggag 330  Q
    ||||||||||||||||||||||||||||||    
T  17675759 gagaatcgaacctgagacctcgaggaggag 17675788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 27841015 - 27841052
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacact 336  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  27841015 gagagaatcgaaccggagatctcgaggaggagcacact 27841052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 84902 - 84866
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  84902 gagaatcgaacttgagaccttgaggaggagcacactc 84866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 3315293 - 3315257
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||| |||||||||| |||||    
T  3315293 gagaatcgaacctgagaccttgaggaggagcgcactc 3315257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 337
Target Start/End: Original strand, 4793094 - 4793122
Alignment:
Q  309 aacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||||    
T  4793094 aacctgagacctcgaggaggagcacactc 4793122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 9842836 - 9842880
Alignment:
Q  293 tcataggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||| ||||||| | ||||| ||||||||||||||||||||||||    
T  9842836 tcatcggagagatttgaacccgagacctcgaggaggagcacactc 9842880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000008; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 20335829 - 20335865
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||||||||||||    
T  20335829 gagaatcgaacctgagacctcgaggaggagcacactc 20335865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 45709703 - 45709743
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  45709703 ggagataatcgaacctgagacctcgaggaggagcacactct 45709743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 7309437 - 7309398
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  7309437 ggagagaatcgaacttgagacctcgaggaggagcacactc 7309398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 43215269 - 43215226
Alignment:
Q  294 cataggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  43215269 cataagagagaatcgaacctgagaccttgaggaggagcacactc 43215226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 336
Target Start/End: Original strand, 5668566 - 5668604
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacact 336  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  5668566 ggagagaatcgatcctgagacctcgaggaggagcacact 5668604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 26459406 - 26459444
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  26459406 gagagaatcgaacctgagaccttgaggaggagcacactc 26459444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 17041008 - 17041045
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacact 336  Q
    |||||||||||||||||||||| |||||||||||||||    
T  17041008 gagagaatcgaacctgagaccttgaggaggagcacact 17041045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 22035480 - 22035439
Alignment:
Q  297 aggagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  22035480 aggagagaatcgaacctgggtcctcgaggaggagcacactct 22035439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 338
Target Start/End: Original strand, 29916806 - 29916843
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||||||||||| |||||||||||||||||    
T  29916806 gagaatcgaacctgagaccttgaggaggagcacactct 29916843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 14058334 - 14058294
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  14058334 ggagagaatcgaacctgagaccttgaggatgagcacactct 14058294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 14368362 - 14368322
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  14368362 ggagagaatcgaacctgagaccttgaggatgagcacactct 14368322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 22760941 - 22760905
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||| ||||||||||||||||    
T  22760941 gagaatcgaacctgagaccttgaggaggagcacactc 22760905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 2446389 - 2446350
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  2446389 ggagagaatcgaacttgagatctcgaggaggagcacactc 2446350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 3175008 - 3174969
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  3175008 ggagagaatcgaacctgagacctcgagatggagcacactc 3174969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 11700245 - 11700206
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  11700245 gagagaatcgaacctgagaccttgaggaggagcaaactct 11700206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 334
Target Start/End: Complemental strand, 21558208 - 21558173
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcaca 334  Q
    |||||||||||||||||||||| |||||||||||||    
T  21558208 gagagaatcgaacctgagaccttgaggaggagcaca 21558173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 2883030 - 2882992
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  2883030 gagagaattgaacctgagaccttgaggaggagcacactc 2882992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 2962539 - 2962501
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  2962539 gagagaatcgaacctgagatcttgaggaggagcacactc 2962501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 9871282 - 9871320
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  9871282 gagagaatcgaatctgagacttcgaggaggagcacactc 9871320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 13106778 - 13106816
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  13106778 gagagaatcgaacctgagaccttgaggaggagtacactc 13106816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 15137633 - 15137595
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  15137633 gagagaatctaacctgagaccttgaggaggagcacactc 15137595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 18363776 - 18363738
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  18363776 gagagaatcaaacctgagaccttgaggaggagcacactc 18363738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 23552198 - 23552160
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  23552198 gagagaatcgaacttgagaccttgaggaggagcacactc 23552160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 41519260 - 41519298
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  41519260 gagagaagcgaacctgagaccttgaggaggagcacactc 41519298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 338
Target Start/End: Original strand, 7499922 - 7499959
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  7499922 gagaatcgaacctgagacctcgaagaggagcaaactct 7499959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 337
Target Start/End: Complemental strand, 25590686 - 25590653
Alignment:
Q  304 aatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||| ||||||||||||||||||||||||    
T  25590686 aatcgaacccgagacctcgaggaggagcacactc 25590653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 29385740 - 29385777
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  29385740 agagaatcaaacctgagaccttgaggaggagcacactc 29385777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 337
Target Start/End: Complemental strand, 31835267 - 31835234
Alignment:
Q  304 aatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||| ||||||||||||||||    
T  31835267 aatcgaacctgagaccttgaggaggagcacactc 31835234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 338
Target Start/End: Original strand, 38374597 - 38374634
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  38374597 gagaatcgaacctaagaccttgaggaggagcacactct 38374634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 337
Target Start/End: Complemental strand, 48772013 - 48771980
Alignment:
Q  304 aatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||| |||||||||||||||    
T  48772013 aatcgaacctgagacctcaaggaggagcacactc 48771980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 18056773 - 18056809
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||  |||||||||||||||    
T  18056773 gagaatcgaacctgagaccttcaggaggagcacactc 18056809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 25242073 - 25242037
Alignment:
Q  302 agaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  25242073 agaatcgaatctgagacctcgaggaggagcatactct 25242037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 336
Target Start/End: Complemental strand, 30217958 - 30217922
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacact 336  Q
    |||||||||||| |||||||| |||||||||||||||    
T  30217958 agagaatcgaacttgagaccttgaggaggagcacact 30217922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 30301957 - 30301925
Alignment:
Q  302 agaatcgaacctgagacctcgaggaggagcaca 334  Q
    ||||||||||||||||||| |||||||||||||    
T  30301957 agaatcgaacctgagaccttgaggaggagcaca 30301925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 37085547 - 37085583
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  37085547 gagaatcgaacctgaaacctcgaggatgagcacactc 37085583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 37473692 - 37473656
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  37473692 gagaatcgaacctgagacctcaaggaggagcaaactc 37473656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 331
Target Start/End: Complemental strand, 39631924 - 39631892
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagc 331  Q
    |||||||||||||||||||||| ||||||||||    
T  39631924 gagagaatcgaacctgagaccttgaggaggagc 39631892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 42712036 - 42712000
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  42712036 gagaatcgaacatgagaccttgaggaggagcacactc 42712000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 43590985 - 43590949
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||| | ||||||||||||||||    
T  43590985 gagaatcgaacctgagacattgaggaggagcacactc 43590949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 49050489 - 49050525
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  49050489 gagaatcgaacctgagacctcaaggaggagtacactc 49050525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000008; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 30938217 - 30938253
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||||||||||||    
T  30938217 gagaatcgaacctgagacctcgaggaggagcacactc 30938253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 39509148 - 39509112
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||||||||||||    
T  39509148 gagaatcgaacctgagacctcgaggaggagcacactc 39509112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 49576889 - 49576928
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  49576889 ggagagaatcgaacctgagaccttgaggaggagcacactc 49576928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 7949450 - 7949488
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  7949450 gagagaatcgaacctgagaccttgaggaggagcacactc 7949488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 23378036 - 23377998
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  23378036 gagagaatcgaacctgagaccttgaggaggagcacactc 23377998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 37109347 - 37109385
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  37109347 gagagaatcgaacctgagaccttgaggaggagcacactc 37109385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 334
Target Start/End: Original strand, 19229206 - 19229239
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcaca 334  Q
    ||||||||||||||||||||||||||||||||||    
T  19229206 gagaatcgaacctgagacctcgaggaggagcaca 19229239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 338
Target Start/End: Complemental strand, 47044795 - 47044758
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||||||||||||||||||||||| |||||    
T  47044795 gagaatcgaacctgagacctcgaggaggagcaaactct 47044758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 19238575 - 19238611
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||| ||||||||||||||||||||||||    
T  19238575 gagaatcgaacccgagacctcgaggaggagcacactc 19238611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 46295175 - 46295139
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||| ||||||||||||||||    
T  46295175 gagaatcgaacctgagaccttgaggaggagcacactc 46295139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 51948561 - 51948522
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
T  51948561 ggagagaattgaacctgagacctcgaggaggggcacactc 51948522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 2622391 - 2622429
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  2622391 gagagaatcgaacctgagacatggaggaggagcacactc 2622429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 4249257 - 4249219
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  4249257 gagagaatcaaacctgagaccttgaggaggagcacactc 4249219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 7292794 - 7292832
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  7292794 gagagaatcgaacctgagactttgaggaggagcacactc 7292832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 12798764 - 12798726
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  12798764 gagagaatcgaacctgaaacctcgaggagcagcacactc 12798726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 13015507 - 13015469
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  13015507 gagagaatcgaacatgagacttcgaggaggagcacactc 13015469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 28635776 - 28635738
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  28635776 gagagaatcgaacctaagacctccaggaggagcacactc 28635738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 37274455 - 37274493
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  37274455 gagagaatcgaacctaagaccttgaggaggagcacactc 37274493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 38869844 - 38869810
Alignment:
Q  303 gaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||| ||||||||||||||||    
T  38869844 gaatcgaacctgagaccttgaggaggagcacactc 38869810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 51622565 - 51622527
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  51622565 gagagagtcgaacctgagaccttgaggaggagcacactc 51622527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 338
Target Start/End: Complemental strand, 15729560 - 15729523
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  15729560 gagaatcgaacttgagacatcgaggaggagcacactct 15729523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 43623441 - 43623478
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||| || |||||||||||||||    
T  43623441 agagaatcgaacctgagacttcaaggaggagcacactc 43623478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 9936959 - 9936995
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||| || ||||||||||||||||||    
T  9936959 gagaatcgaacctgaaacttcgaggaggagcacactc 9936995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 32992690 - 32992654
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  32992690 gagaatcgaacttgagaccttgaggaggagcacactc 32992654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 52254399 - 52254439
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||| ||||||| ||||| ||||||||||||||||    
T  52254399 ggagagaatctaacctgaaacctcaaggaggagcacactct 52254439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 55427198 - 55427234
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  55427198 gagaatcgaacctgagacctcgagcaggagcagactc 55427234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 39715070 - 39715034
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||||||||||||||||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactc 39715034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 33582053 - 33582014
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  33582053 gagagaatcgaacctgagacctcaaggaggagcacactct 33582014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 336
Target Start/End: Original strand, 4262297 - 4262335
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacact 336  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  4262297 ggagagaatcgaacctgagaccttgaggaggagcacact 4262335  T

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Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 338
Target Start/End: Original strand, 21939121 - 21939158
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  21939121 gagaatcgaacctgagatctcgaggaggagcacactct 21939158  T

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Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 33569854 - 33569891
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacact 336  Q
    |||||||||||||||||||||||||||| |||||||||    
T  33569854 gagagaatcgaacctgagacctcgaggaagagcacact 33569891  T

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Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 338
Target Start/End: Complemental strand, 37480153 - 37480116
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||||||||||| |||||||||||||||||    
T  37480153 gagaatcgaacctgagaccttgaggaggagcacactct 37480116  T

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Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 42327392 - 42327429
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  42327392 agagaatcgaacctgagaccttgaggaggagcacactc 42327429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 29503349 - 29503313
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||| ||||||||||||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactc 29503313  T

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Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 32687558 - 32687522
Alignment:
Q  302 agaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||||||||||||||||||| ||||||||    
T  32687558 agaatcgaacctgagacctcgaggaggaacacactct 32687522  T

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Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 3661004 - 3661043
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  3661004 gagagaatcgaacctgagatctcgaggaggggcacactct 3661043  T

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Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 7799030 - 7799069
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  7799030 ggagagaatcgaatctgagatctcgaggaggagcacactc 7799069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 19244189 - 19244150
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  19244189 gagagaatcgaacctgagaccttggggaggagcacactct 19244150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 25637232 - 25637193
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  25637232 ggagagaaccgaacctgagacctcgagaaggagcacactc 25637193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 7599978 - 7600016
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  7599978 agagaatcgaacatgaaacctcgaggaggagcacactct 7600016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 13803575 - 13803537
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  13803575 gagataatcgaacctgagaccttgaggaggagcacactc 13803537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 14500357 - 14500319
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  14500357 gagagaatcgaatctgagacctagaggaggagcacactc 14500319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Original strand, 21195676 - 21195710
Alignment:
Q  303 gaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||| ||||||||||||||||    
T  21195676 gaatcgaacctgagaccttgaggaggagcacactc 21195710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 31573638 - 31573676
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  31573638 agagaatcgaacctgagacatcaaggaggagcacactct 31573676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 42860424 - 42860390
Alignment:
Q  303 gaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||| |||||||||||||||||||||||||    
T  42860424 gaatcgaacttgagacctcgaggaggagcacactc 42860390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 11251167 - 11251130
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacact 336  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  11251167 gagagaatcaaacctgagaccttgaggaggagcacact 11251130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 337
Target Start/End: Complemental strand, 28846766 - 28846733
Alignment:
Q  304 aatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||| ||||||||||||||||||    
T  28846766 aatcgaacctgagacatcgaggaggagcacactc 28846733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 360740 - 360784
Alignment:
Q  300 agagaatcgaacctgagacctcgaggaggagcacactctgatgtc 344  Q
    ||||||| ||||||||||| | ||||||||||||||||| |||||    
T  360740 agagaattgaacctgagacgtagaggaggagcacactctcatgtc 360784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 13519048 - 13519084
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacac 335  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  13519048 gagagaatcgaacttgagacctcaaggaggagcacac 13519084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 19016109 - 19016073
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  19016109 gagaatcaaacttgagacctcgaggaggagcacactc 19016073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 21213847 - 21213811
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  21213847 gagaatcgaacctgagacctcaaggaggaacacactc 21213811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 23052521 - 23052557
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||| |||||| |||||||||    
T  23052521 gagaatcgaacctgagaccttgaggagaagcacactc 23052557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 13041 - 13080
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  13041 ggagagaatcgaacctgagaccttgaggaggagcacactc 13080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 2468 - 2504
Alignment:
Q  301 gagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||| ||||||||||||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactc 2504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 49387 - 49347
Alignment:
Q  298 ggagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  49387 ggagagaatcgaacctgatacctcgaagaggagcacactct 49347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 334
Target Start/End: Original strand, 836 - 871
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcaca 334  Q
    |||||||||||||||||||| |||||||||||||||    
T  836 gagagaatcgaacctgagacttcgaggaggagcaca 871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 41629 - 41668
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactct 338  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  41629 gagagaattgaacctgagacctcgaggaggagcatactct 41668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 2707 - 2745
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  2707 gagagaatcgaacctgagaccttgaggaggagcagactc 2745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 19958 - 19996
Alignment:
Q  299 gagagaatcgaacctgagacctcgaggaggagcacactc 337  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  19958 gagagaatcgaacctgagaccttgaggaggagcatactc 19996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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