View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7830_low_7 (Length: 317)
Name: NF7830_low_7
Description: NF7830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7830_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 7 - 300
Target Start/End: Complemental strand, 40231345 - 40231054
Alignment:
| Q |
7 |
ctgaaatgaagtgatatatatatagtgtatttaagagtttaggaatggaccaatggcatccttacattataattttcagacaaatcagtatattttattt |
106 |
Q |
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| T |
40231345 |
ctgaaataaagtgatata--tatagtgtatttaagagtttaggaatggacaaatggtatccttacattataattttcagacaaatcagtatattttattt |
40231248 |
T |
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| Q |
107 |
tccaactggatcagataaaagtcacttcatacagacttagctcaagcatatggtaagtggttattttcacagtgatattgtacaaattaaccagttctag |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40231247 |
tccaactggatcagataaaagtcacttcatacagacttagctcaagcatatggtaagtggttattttcacagtgatattgtacaaattaaccagttctag |
40231148 |
T |
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| Q |
207 |
gtgtcatagtttaagcttaaaagaatccgagggtgataattcattgccatacaggggagatagcttaattatattgtcttcattatagagccgt |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |
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| T |
40231147 |
gtgtcatagtttaagcttaaaagaatccgagggtgataattcattgccatataggggagatagcttaattatattgtcttcatcatagagccgt |
40231054 |
T |
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