View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7830_low_9 (Length: 286)
Name: NF7830_low_9
Description: NF7830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7830_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 5867591 - 5867859
Alignment:
| Q |
1 |
aaaaatgatagtgaattgattttttatatatgtagagttattttaatattnnnnnnnn-cact--gagtgattaatatattctgaaatttgttcctttnn |
97 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||| |
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| T |
5867591 |
aaaaatgatagtgaattgattttttatatatgtagagttgttttaatattaaaaaaaaacactatgagtgattaatatattctgaaatttgttcctttaa |
5867690 |
T |
|
| Q |
98 |
nnnnnntattctgaaatttgtcttctaataattattgacagggatactatccattctatgtaactatagtagggaacttttaagaaacaaaatgattaca |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
5867691 |
aaaaaatattctgaaatttgtcttctaataattattgacagggatattgtccattct--gtaactatagtagggaacttttaagaaacaaaatgattaca |
5867788 |
T |
|
| Q |
198 |
aacatgattgtcaatttttcaaatgttatactattaatagtttcaccacttatcaactttcattgaaatta |
268 |
Q |
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||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
5867789 |
aacataattgtcaatttttcaaatgttatactataaatagtttcaccacttatcaactttcattgaaatta |
5867859 |
T |
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