View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7831_low_23 (Length: 222)
Name: NF7831_low_23
Description: NF7831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7831_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 20887794 - 20888002
Alignment:
| Q |
1 |
gattatattccttaaaatctataccgaaacaacatactacaaagtacaaaagacaagcatcaattgtattagagtaaacaatcttgccacacaatccatc |
100 |
Q |
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| T |
20887794 |
gattatattccttaaaatctataccgaaacaacatactgcaaagtacaaaagacaagcatcaattgtattagagtaaacaatcttgccacacaatccatc |
20887893 |
T |
|
| Q |
101 |
tagaagaacattcaatattccattcaagaacaaaagccactgcccaatgattcgctaaaacacaactcaaacctaaacattcaaaatccaccaaaatgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
20887894 |
tagaagaacattcaatattccattcaagaacaaaagccactgcccaatgattcgctaaaacacaactcaaacctaaacatacaaaatccaccaaaatgat |
20887993 |
T |
|
| Q |
201 |
gaaatacct |
209 |
Q |
| |
|
||||||||| |
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| T |
20887994 |
gaaatacct |
20888002 |
T |
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