View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7831_low_4 (Length: 502)

Name: NF7831_low_4
Description: NF7831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7831_low_4
NF7831_low_4
[»] chr3 (60 HSPs)
chr3 (20-262)||(47559238-47559485)
chr3 (335-461)||(42096721-42096847)
chr3 (335-462)||(45079183-45079310)
chr3 (335-481)||(30248013-30248158)
chr3 (346-481)||(41410216-41410351)
chr3 (335-473)||(35688305-35688444)
chr3 (335-481)||(8340144-8340291)
chr3 (343-481)||(6083501-6083639)
chr3 (336-462)||(32995238-32995364)
chr3 (343-462)||(49374804-49374923)
chr3 (349-489)||(54444346-54444486)
chr3 (335-462)||(10085238-10085365)
chr3 (335-462)||(10192158-10192285)
chr3 (335-437)||(48080065-48080166)
chr3 (335-445)||(48583732-48583842)
chr3 (345-437)||(6408587-6408679)
chr3 (338-446)||(27064198-27064306)
chr3 (338-433)||(7940337-7940431)
chr3 (335-436)||(50508876-50508976)
chr3 (338-437)||(5041057-5041155)
chr3 (336-447)||(9162990-9163101)
chr3 (350-437)||(19873111-19873197)
chr3 (335-437)||(19618688-19618789)
chr3 (335-437)||(24987410-24987511)
chr3 (336-462)||(35732240-35732366)
chr3 (343-447)||(46819171-46819274)
chr3 (350-481)||(2150638-2150768)
chr3 (344-447)||(5908243-5908346)
chr3 (335-437)||(39352464-39352564)
chr3 (350-476)||(42881357-42881481)
chr3 (364-473)||(46584698-46584808)
chr3 (338-416)||(51055465-51055543)
chr3 (368-437)||(11671773-11671841)
chr3 (335-416)||(38694837-38694918)
chr3 (335-437)||(50481073-50481168)
chr3 (332-473)||(19454785-19454928)
chr3 (383-462)||(35203302-35203380)
chr3 (379-477)||(2013017-2013115)
chr3 (335-473)||(22845097-22845233)
chr3 (345-467)||(33099659-33099780)
chr3 (335-437)||(41923972-41924074)
chr3 (335-405)||(49359965-49360035)
chr3 (338-406)||(23299554-23299622)
chr3 (335-405)||(13735661-13735731)
chr3 (335-401)||(44792681-44792747)
chr3 (336-437)||(12905619-12905719)
chr3 (383-436)||(14418284-14418336)
chr3 (335-436)||(25467489-25467593)
chr3 (349-462)||(30964531-30964640)
chr3 (349-462)||(30980343-30980452)
chr3 (383-443)||(33558787-33558846)
chr3 (335-374)||(26795319-26795358)
chr3 (383-444)||(50622253-50622315)
chr3 (343-449)||(25630309-25630416)
chr3 (402-447)||(33118961-33119006)
chr3 (348-449)||(33333482-33333583)
chr3 (335-437)||(40563942-40564047)
chr3 (446-484)||(26291704-26291742)
chr3 (383-436)||(27346619-27346672)
chr3 (342-395)||(33118708-33118761)
[»] chr6 (19 HSPs)
chr6 (335-462)||(1221682-1221809)
chr6 (335-462)||(24447093-24447220)
chr6 (335-474)||(10499182-10499322)
chr6 (335-437)||(20691582-20691684)
chr6 (335-462)||(9062114-9062241)
chr6 (338-447)||(6337251-6337359)
chr6 (335-442)||(6938059-6938162)
chr6 (338-447)||(28769896-28770004)
chr6 (335-481)||(6337884-6338031)
chr6 (347-445)||(31070823-31070919)
chr6 (396-481)||(33960103-33960188)
chr6 (350-485)||(9350818-9350952)
chr6 (335-405)||(1329587-1329657)
chr6 (335-437)||(33331615-33331716)
chr6 (335-437)||(33328603-33328704)
chr6 (359-436)||(12429462-12429538)
chr6 (383-462)||(6799407-6799486)
chr6 (335-377)||(31784026-31784068)
chr6 (338-401)||(13534221-13534284)
[»] chr2 (36 HSPs)
chr2 (335-462)||(4289644-4289771)
chr2 (332-462)||(15234311-15234442)
chr2 (335-468)||(29546061-29546196)
chr2 (332-447)||(39767119-39767234)
chr2 (335-437)||(667970-668071)
chr2 (335-462)||(35048627-35048754)
chr2 (337-481)||(29155322-29155465)
chr2 (335-437)||(23231735-23231838)
chr2 (335-437)||(4592193-4592294)
chr2 (336-473)||(41935486-41935624)
chr2 (337-473)||(18974709-18974846)
chr2 (343-462)||(8027424-8027544)
chr2 (360-448)||(42969053-42969141)
chr2 (336-462)||(16711317-16711442)
chr2 (343-437)||(31440635-31440728)
chr2 (366-447)||(40507620-40507701)
chr2 (335-437)||(4481060-4481163)
chr2 (335-458)||(9205182-9205301)
chr2 (335-437)||(13142571-13142672)
chr2 (335-437)||(25424758-25424860)
chr2 (335-437)||(32422740-32422841)
chr2 (335-437)||(33867544-33867646)
chr2 (336-481)||(2656803-2656948)
chr2 (397-462)||(10391618-10391683)
chr2 (368-448)||(40475272-40475352)
chr2 (338-445)||(3329198-3329305)
chr2 (343-405)||(30241441-30241503)
chr2 (335-437)||(38620396-38620497)
chr2 (336-437)||(17154146-17154245)
chr2 (348-437)||(20937062-20937150)
chr2 (345-437)||(35005459-35005552)
chr2 (383-462)||(12345514-12345593)
chr2 (335-393)||(15161991-15162049)
chr2 (380-437)||(12757815-12757871)
chr2 (383-462)||(11788662-11788741)
chr2 (380-445)||(8753893-8753958)
[»] scaffold0230 (1 HSPs)
scaffold0230 (335-462)||(26643-26770)
[»] chr7 (53 HSPs)
chr7 (335-462)||(17172192-17172319)
chr7 (343-476)||(40789490-40789623)
chr7 (347-481)||(30391574-30391708)
chr7 (335-481)||(44300727-44300873)
chr7 (335-481)||(48558638-48558784)
chr7 (335-462)||(40342289-40342416)
chr7 (335-481)||(2959949-2960095)
chr7 (337-437)||(43702413-43702512)
chr7 (335-437)||(19805052-19805153)
chr7 (335-473)||(1876003-1876143)
chr7 (338-476)||(28067230-28067368)
chr7 (335-447)||(5924057-5924170)
chr7 (335-447)||(36074112-36074224)
chr7 (332-485)||(38469869-38470022)
chr7 (335-481)||(11244038-11244185)
chr7 (335-462)||(26299167-26299294)
chr7 (335-462)||(33978839-33978966)
chr7 (335-436)||(43224332-43224432)
chr7 (335-437)||(10066256-10066359)
chr7 (343-481)||(45112216-45112355)
chr7 (335-417)||(36072619-36072701)
chr7 (343-435)||(30738635-30738726)
chr7 (335-437)||(16567581-16567682)
chr7 (335-437)||(16597980-16598081)
chr7 (335-437)||(46181227-46181328)
chr7 (344-448)||(3551521-3551624)
chr7 (380-447)||(7376603-7376670)
chr7 (360-447)||(16561988-16562075)
chr7 (360-447)||(16603587-16603674)
chr7 (343-437)||(5023188-5023284)
chr7 (336-378)||(9355219-9355261)
chr7 (335-481)||(25309469-25309613)
chr7 (335-405)||(27398594-27398664)
chr7 (374-447)||(12499591-12499664)
chr7 (337-442)||(42284521-42284625)
chr7 (383-447)||(9223691-9223755)
chr7 (343-437)||(31454920-31455015)
chr7 (383-437)||(9477708-9477761)
chr7 (383-437)||(33067480-33067533)
chr7 (335-393)||(34152399-34152457)
chr7 (335-393)||(34174667-34174725)
chr7 (368-446)||(38398422-38398499)
chr7 (368-446)||(38400964-38401041)
chr7 (368-405)||(3363003-3363040)
chr7 (383-476)||(24430264-24430357)
chr7 (383-481)||(21153261-21153357)
chr7 (344-407)||(24395504-24395567)
chr7 (389-436)||(43218675-43218721)
chr7 (335-393)||(48644542-48644600)
chr7 (383-464)||(31330919-31331000)
chr7 (379-447)||(16278487-16278554)
chr7 (335-419)||(20443404-20443488)
chr7 (383-431)||(23352005-23352053)
[»] chr5 (39 HSPs)
chr5 (335-462)||(34718756-34718883)
chr5 (335-462)||(41692440-41692567)
chr5 (335-481)||(19254441-19254587)
chr5 (332-481)||(38309781-38309930)
chr5 (337-461)||(6277786-6277912)
chr5 (336-462)||(35853531-35853657)
chr5 (335-481)||(4901896-4902040)
chr5 (332-481)||(24489027-24489175)
chr5 (338-476)||(639320-639458)
chr5 (336-462)||(32302398-32302524)
chr5 (335-436)||(7978039-7978139)
chr5 (336-481)||(19549359-19549505)
chr5 (335-437)||(29455799-29455900)
chr5 (349-437)||(41983270-41983357)
chr5 (335-468)||(4572277-4572408)
chr5 (335-437)||(1060956-1061058)
chr5 (335-473)||(14088277-14088413)
chr5 (338-436)||(22632244-22632341)
chr5 (336-437)||(31149693-31149794)
chr5 (385-481)||(25694629-25694725)
chr5 (335-447)||(30774815-30774927)
chr5 (335-447)||(36470439-36470550)
chr5 (343-485)||(15673928-15674071)
chr5 (350-449)||(16620299-16620398)
chr5 (335-485)||(33347024-33347175)
chr5 (338-436)||(14087675-14087771)
chr5 (343-437)||(14645331-14645425)
chr5 (350-476)||(16186791-16186917)
chr5 (343-468)||(35935322-35935448)
chr5 (339-481)||(6310992-6311136)
chr5 (343-437)||(41616600-41616695)
chr5 (336-436)||(18595370-18595469)
chr5 (383-448)||(3049755-3049820)
chr5 (348-436)||(23141623-23141710)
chr5 (379-446)||(42030917-42030984)
chr5 (383-437)||(6224844-6224897)
chr5 (378-477)||(5657677-5657777)
chr5 (335-375)||(10937429-10937469)
chr5 (335-377)||(15719239-15719281)
[»] chr4 (60 HSPs)
chr4 (335-462)||(52802231-52802358)
chr4 (335-462)||(53140628-53140755)
chr4 (335-481)||(29405820-29405966)
chr4 (335-462)||(22247877-22248005)
chr4 (343-481)||(45097587-45097726)
chr4 (335-473)||(22829755-22829893)
chr4 (336-462)||(33733395-33733520)
chr4 (335-462)||(8805892-8806019)
chr4 (335-462)||(39804287-39804414)
chr4 (343-481)||(46080743-46080882)
chr4 (343-444)||(14595325-14595426)
chr4 (336-448)||(56445142-56445255)
chr4 (335-462)||(26340197-26340324)
chr4 (343-437)||(2224949-2225042)
chr4 (335-462)||(22306767-22306896)
chr4 (335-437)||(21075847-21075945)
chr4 (337-437)||(3387208-3387307)
chr4 (343-462)||(31786439-31786561)
chr4 (335-437)||(2721230-2721326)
chr4 (335-437)||(12187788-12187884)
chr4 (343-473)||(31713589-31713720)
chr4 (343-477)||(51806882-51807016)
chr4 (332-437)||(1731043-1731147)
chr4 (335-437)||(41003337-41003441)
chr4 (335-447)||(1757962-1758073)
chr4 (335-462)||(28234139-28234265)
chr4 (338-437)||(34459623-34459721)
chr4 (335-417)||(11034713-11034795)
chr4 (335-405)||(12185796-12185866)
chr4 (335-437)||(42755358-42755459)
chr4 (336-475)||(50981907-50982040)
chr4 (348-436)||(33983167-33983254)
chr4 (358-481)||(7262052-7262175)
chr4 (335-437)||(14576809-14576905)
chr4 (363-481)||(23349341-23349462)
chr4 (335-437)||(29149008-29149109)
chr4 (335-437)||(32655513-32655615)
chr4 (335-437)||(42053259-42053361)
chr4 (335-437)||(52180769-52180871)
chr4 (335-437)||(54979138-54979239)
chr4 (368-481)||(8644179-8644291)
chr4 (343-427)||(9608993-9609077)
chr4 (342-437)||(52595569-52595663)
chr4 (375-481)||(8614603-8614708)
chr4 (336-436)||(22313348-22313447)
chr4 (343-437)||(21245865-21245957)
chr4 (383-446)||(21297268-21297331)
chr4 (336-437)||(38000610-38000714)
chr4 (348-405)||(3094990-3095047)
chr4 (343-416)||(27586596-27586669)
chr4 (382-447)||(52013849-52013914)
chr4 (409-481)||(41780736-41780808)
chr4 (354-447)||(39485115-39485209)
chr4 (368-436)||(46030305-46030372)
chr4 (337-444)||(9930458-9930564)
chr4 (343-405)||(652270-652332)
chr4 (363-437)||(8066003-8066076)
chr4 (402-443)||(24486647-24486688)
chr4 (381-437)||(28928615-28928670)
chr4 (349-405)||(29994351-29994407)
[»] chr1 (66 HSPs)
chr1 (335-462)||(4893266-4893393)
chr1 (335-462)||(29185094-29185221)
chr1 (335-462)||(33362869-33362996)
chr1 (335-481)||(20414975-20415121)
chr1 (418-485)||(14106383-14106450)
chr1 (335-473)||(31646262-31646399)
chr1 (335-437)||(32835510-32835611)
chr1 (337-474)||(50099822-50099958)
chr1 (336-475)||(48985138-48985278)
chr1 (335-462)||(39026748-39026875)
chr1 (335-437)||(19506390-19506491)
chr1 (335-437)||(47662282-47662384)
chr1 (335-444)||(19996668-19996776)
chr1 (337-436)||(610719-610817)
chr1 (335-437)||(29054604-29054706)
chr1 (338-481)||(35949554-35949698)
chr1 (350-481)||(29512168-29512298)
chr1 (335-462)||(35738985-35739112)
chr1 (335-481)||(48796544-48796691)
chr1 (335-437)||(2978426-2978527)
chr1 (335-437)||(25059108-25059209)
chr1 (335-437)||(44327929-44328030)
chr1 (335-473)||(29426274-29426414)
chr1 (337-425)||(3192165-3192253)
chr1 (337-425)||(3200983-3201071)
chr1 (337-425)||(3209820-3209908)
chr1 (343-431)||(9472963-9473051)
chr1 (335-446)||(30489673-30489784)
chr1 (343-473)||(48662672-48662803)
chr1 (335-437)||(945487-945588)
chr1 (343-437)||(973524-973617)
chr1 (360-462)||(32133501-32133603)
chr1 (377-449)||(3821262-3821334)
chr1 (358-485)||(8981516-8981646)
chr1 (343-435)||(28220983-28221074)
chr1 (343-476)||(31107608-31107741)
chr1 (343-437)||(2975244-2975337)
chr1 (343-437)||(7842581-7842674)
chr1 (335-437)||(35978508-35978610)
chr1 (335-405)||(42069148-42069218)
chr1 (343-449)||(48514447-48514553)
chr1 (335-476)||(30622960-30623099)
chr1 (338-447)||(31873291-31873399)
chr1 (341-437)||(46772483-46772572)
chr1 (350-437)||(10786239-10786325)
chr1 (335-437)||(13312740-13312843)
chr1 (335-473)||(33794361-33794502)
chr1 (350-476)||(2465514-2465639)
chr1 (335-437)||(9222250-9222351)
chr1 (335-405)||(48964404-48964474)
chr1 (332-397)||(14106324-14106386)
chr1 (368-462)||(7121041-7121135)
chr1 (335-401)||(25815361-25815427)
chr1 (360-437)||(424603-424679)
chr1 (387-474)||(16177033-16177120)
chr1 (335-378)||(40094567-40094610)
chr1 (338-447)||(4052354-4052463)
chr1 (383-462)||(40094494-40094575)
chr1 (383-436)||(38491461-38491513)
chr1 (379-447)||(28192482-28192550)
chr1 (399-447)||(45816510-45816557)
chr1 (338-374)||(46772564-46772600)
chr1 (336-481)||(2501581-2501725)
chr1 (154-191)||(23941468-23941505)
chr1 (343-447)||(35659564-35659667)
chr1 (332-377)||(38491423-38491468)
[»] chr8 (34 HSPs)
chr8 (336-462)||(859511-859637)
chr8 (335-481)||(20216215-20216361)
chr8 (335-481)||(20235813-20235959)
chr8 (336-462)||(221992-222119)
chr8 (336-462)||(691147-691274)
chr8 (336-462)||(735615-735742)
chr8 (344-437)||(6109639-6109731)
chr8 (335-475)||(7580065-7580203)
chr8 (332-437)||(24891417-24891521)
chr8 (338-437)||(2620960-2621058)
chr8 (367-473)||(39221525-39221631)
chr8 (332-437)||(25500151-25500255)
chr8 (335-481)||(38020056-38020203)
chr8 (335-437)||(19643513-19643614)
chr8 (335-437)||(24789520-24789622)
chr8 (338-437)||(1376196-1376297)
chr8 (338-447)||(37226761-37226870)
chr8 (335-447)||(26561217-26561328)
chr8 (338-437)||(2472280-2472378)
chr8 (332-437)||(15961670-15961775)
chr8 (332-437)||(25419272-25419376)
chr8 (362-489)||(29528135-29528261)
chr8 (335-481)||(7057613-7057757)
chr8 (360-437)||(45553100-45553176)
chr8 (335-405)||(3616895-3616965)
chr8 (341-477)||(15542148-15542285)
chr8 (379-476)||(43511244-43511340)
chr8 (335-395)||(1667264-1667324)
chr8 (380-436)||(43239235-43239290)
chr8 (383-462)||(38551621-38551700)
chr8 (344-433)||(30801265-30801352)
chr8 (343-473)||(25178922-25179050)
chr8 (335-377)||(38551586-38551628)
chr8 (412-444)||(33212341-33212373)
[»] scaffold0160 (1 HSPs)
scaffold0160 (335-473)||(26087-26226)
[»] scaffold0005 (2 HSPs)
scaffold0005 (343-444)||(221952-222053)
scaffold0005 (335-437)||(240470-240566)
[»] scaffold0024 (1 HSPs)
scaffold0024 (335-462)||(109978-110105)
[»] scaffold0602 (1 HSPs)
scaffold0602 (368-481)||(5049-5161)
[»] scaffold0249 (1 HSPs)
scaffold0249 (335-449)||(20041-20155)
[»] scaffold0011 (1 HSPs)
scaffold0011 (336-481)||(250167-250313)
[»] scaffold0938 (1 HSPs)
scaffold0938 (338-476)||(472-615)
[»] scaffold0062 (2 HSPs)
scaffold0062 (338-476)||(23837-23980)
scaffold0062 (338-476)||(34005-34148)
[»] scaffold0312 (1 HSPs)
scaffold0312 (360-437)||(5870-5946)
[»] scaffold0242 (2 HSPs)
scaffold0242 (383-476)||(13044-13137)
scaffold0242 (383-476)||(21879-21972)
[»] scaffold0102 (1 HSPs)
scaffold0102 (380-436)||(16503-16559)


Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 20 - 262
Target Start/End: Original strand, 47559238 - 47559485
Alignment:
Q  20 atactacggccacaaccaaagtcgtcttcttcctcctccttcactcctggaactcaagtggactcaaatgggcttgtttcatccacttagtattggactt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47559238 atactacggccacaaccaaagtcgtcttcttcctcctccttcactcctggaactcaagtggactcaaatgggcttgtttcatccacttcgtattggactt 47559337  T
Q  120 caattcctatgggcttaactccgctccgcattttgaattctgctcttctctcggcacatttcgctcgcgcccaactgagatacttaaact-----tgtgt 214  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| || |||     |||||    
T  47559338 caattcctatgggcttaactcggctccgcattttgaattctgctcttctctcatcacatttcgctcgcgcccaactgagatacctagactactcctgtgt 47559437  T
Q  215 tagttatctaacgcacgtatattgcacaagaagtcatccagcgtgagt 262  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  47559438 tagttacctaacgcacgtatattgcacaagaagtcatccagcgtgagt 47559485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 42096847 - 42096721
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  42096847 cccttccccataccctatgggcacttaagtgcccatacccgcacccattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataa 42096748  T
Q  435 aaccatgatccaaaattattcaaatca 461  Q
    ||| |||||||||||||||| ||||||    
T  42096747 aactatgatccaaaattatttaaatca 42096721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 45079310 - 45079183
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||| |||||||||| |||||||||||||||| || ||||||||| ||||||||| ||||||||||||||||    
T  45079310 cccttccccataccctatgggcacttaagtgcccatacccgcacccattacccgcactttctcgatgaaaagacaataaaaaacatcacaattgaaataa 45079211  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||||||| |||||||    
T  45079210 aactatgatccaaaattatttaaatcaa 45079183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 335 - 481
Target Start/End: Complemental strand, 30248158 - 30248013
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||  ||||||| |||||| ||| |||||||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  30248158 cccttccccataccctatgggcaattaagtgcccatacc-gcacccattacccgcactttctctatgaaaagacaataaataatatcacaattgaaataa 30248060  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||| |||||||||||||||| ||||||| | ||| ||||||| ||||    
T  30248059 aactatgatccaaaattatttaaatcaactaataaaatagtacgaat 30248013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 346 - 481
Target Start/End: Complemental strand, 41410351 - 41410216
Alignment:
Q  346 accctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatcc 445  Q
    |||||||| |||||||||||| ||||||||||  |||||||| |||||| |||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  41410351 accctatgagcacctaagtgcccatacccgcacgcattacccacactttctctatgaaaagacaataaaaaacatcacaattgaaataaaactatgatcc 41410252  T
Q  446 aaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||||||||| ||||||| | ||| ||||||| ||||    
T  41410251 aaaattatttaaatcaactaataaaatagtatgaat 41410216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 335 - 473
Target Start/End: Original strand, 35688305 - 35688444
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaata-tcacaattgaaata 433  Q
    ||||||| |||| ||||||||||||||||||| |||||||||| |||||||||||| |||| ||||||||||| ||||||||| |  |||||||||||||    
T  35688305 cccttccccatatcctatgggcacctaagtgcccatacccgcacccattacccgcattttaactatgaaaagacaataaaaaaaacccacaattgaaata 35688404  T
Q  434 aaaccatgatccaaaattattcaaatcaattcatataata 473  Q
    |||| |||||||||||   |||||||||| ||||| ||||    
T  35688405 aaactatgatccaaaaaatttcaaatcaactcataaaata 35688444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 335 - 481
Target Start/End: Original strand, 8340144 - 8340291
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaa-tatcacaattgaaata 433  Q
    ||||||| ||||||| |||||||||||||||| |||||||||| | |||||||||| |||| ||||||||||| |||||||||  | |||||||||||||    
T  8340144 cccttccccatacccaatgggcacctaagtgcccatacccgcacctattacccgcattttaactatgaaaagacaataaaaaaccaccacaattgaaata 8340243  T
Q  434 aaaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    |||| |||||||||||   ||| |||||| ||||| ||||||| ||||    
T  8340244 aaactatgatccaaaaaatttcgaatcaactcataaaatagtatgaat 8340291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 343 - 481
Target Start/End: Complemental strand, 6083639 - 6083501
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatga 442  Q
    ||||||||||||| ||||||||||||||| |   | | ||||||||||||||||||||||| | |  |||||||| |||||| |||||||||||| ||||    
T  6083639 cataccctatgggtacctaagtgctcatatctatacctattacccgcactttatctatgaagatactataaaaaacatcacatttgaaataaaactatga 6083540  T
Q  443 tccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    |||||||||| ||||||||| ||||| ||||||| ||||    
T  6083539 tccaaaattaatcaaatcaagtcataaaatagtacgaat 6083501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 462
Target Start/End: Original strand, 32995238 - 32995364
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaa 435  Q
    |||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||   ||| ||||||||||||||  | |||| ||||||||||    
T  32995238 ccttccacataccctatgggcacttaagtgctcatacccgcacccattacccgcactttagacatggaaagataataaaaatcaccacacttgaaataaa 32995337  T
Q  436 accatgatccaaaattattcaaatcaa 462  Q
    || ||||||||||| | || |||||||    
T  32995338 actatgatccaaaaatttttaaatcaa 32995364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 343 - 462
Target Start/End: Original strand, 49374804 - 49374923
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatga 442  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||| | ||||||||||||| ||||  | |||  |||||||||||| ||||    
T  49374804 cataccctatgggcacttaagtgctcatacccgcacccattacccgcactttagccatgaaaagataatgaaaatcaccacgcttgaaataaaactatga 49374903  T
Q  443 tccaaaattattcaaatcaa 462  Q
    |||||| || || |||||||    
T  49374904 tccaaatttttttaaatcaa 49374923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 349 - 489
Target Start/End: Complemental strand, 54444486 - 54444346
Alignment:
Q  349 ctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaa 448  Q
    ||||| ||| ||||||| ||||| || || |||||||| |||||||| ||||||||||| |||||||||||| || ||||||||||||| ||| |||||     
T  54444486 ctatgagcatctaagtgttcatatccacacccattaccagcactttaactatgaaaagacaataaaaaatattacgattgaaataaaactatggtccaag 54444387  T
Q  449 attattcaaatcaattcatataatagtaggaatagtattat 489  Q
    | | |||||||||| ||||| ||||||| |||| |||||||    
T  54444386 aattttcaaatcaactcataaaatagtatgaatcgtattat 54444346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 10085365 - 10085238
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || ||||||||||||||| || | ||||||||||||||| | ||||||||||||||||||  | |||| |||||||||    
T  10085365 cccttccccataccctatgggtacttaagtgctcataccctcacctattacccgcactttagccatgaaaagataataaaaatcaccacacttgaaataa 10085266  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| ||||| |||| || || |||||||    
T  10085265 aactatgatgcaaatttttttaaatcaa 10085238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 10192285 - 10192158
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || ||||||||||||||| || | ||||||||||||||| | ||||||||||||||||||  | |||| |||||||||    
T  10192285 cccttccccataccctatgggtacttaagtgctcataccctcacctattacccgcactttagccatgaaaagataataaaaatcaccacacttgaaataa 10192186  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| ||||| |||| || || |||||||    
T  10192185 aactatgatgcaaatttttttaaatcaa 10192158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 48080065 - 48080166
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||| |||||||| |||||||||  ||||||||||  |||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  48080065 cccttccccatatcctatgggtacctaagtgtccatacccgcactcattacccgcactttaactatgaaaagacaat-aaaaatatcacaattgaaataa 48080163  T
Q  435 aac 437  Q
    |||    
T  48080164 aac 48080166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 335 - 445
Target Start/End: Original strand, 48583732 - 48583842
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||| |||||| |||  |||||||||||||||| | ||||||||| ||||||||| | ||||||||||||||    
T  48583732 cccttccccataccctatgggcacttaagtgcacatacctgcagtcattacccgcactttaaccatgaaaagacaataaaaaacaccacaattgaaataa 48583831  T
Q  435 aaccatgatcc 445  Q
    ||  |||||||    
T  48583832 aattatgatcc 48583842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 345 - 437
Target Start/End: Original strand, 6408587 - 6408679
Alignment:
Q  345 taccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||||||| |||||||||| |||||||||| ||||||||||||||||| ||||||||| | || |||||| ||||||| |||||||||||    
T  6408587 taccctatgggtacctaagtgcccatacccgcacccattacccgcactttaactatgaaaaaacaaaaaaaaacatcacaaatgaaataaaac 6408679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 446
Target Start/End: Original strand, 27064198 - 27064306
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||||||||||||||||||||||||| || ||||| | ||||||||| |||||||  ||| |||||  ||||||||| ||||| |||||||||||||    
T  27064198 ttcctcataccctatgggcacctaagtgcccacacccgtacccattacccacactttaattataaaaaggcaataaaaaacatcaccattgaaataaaac 27064297  T
Q  438 catgatcca 446  Q
     ||||||||    
T  27064298 tatgatcca 27064306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 433
Target Start/End: Original strand, 7940337 - 7940431
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaata 433  Q
    |||| |||||||||||   |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||||| |||||||||||||||    
T  7940337 ttccccataccctatgaatacctaagtgcccatacccgcatccattacccgcactttagctatgaaaagatagt-aaaaacatcacaattgaaata 7940431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 50508976 - 50508876
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||| ||||||||||||||| || ||||||| |||||| ||| ||| ||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||    
T  50508976 ccctttctcataccctatgggaacttaagtgcccatacctgcacccactacccgcactttaactatgaaaagacaat-aaaaacatcacaattgaaataa 50508878  T
Q  435 aa 436  Q
    ||    
T  50508877 aa 50508876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 5041155 - 5041057
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||| |||||||||| || | |||||||| |||||| ||| |||||| |||||||||| |||||||||||||||| |||| |||||||||||||||||||    
T  5041155 ttccccataccctataggtatctaagtgcccatacctgcacccattatccgcactttaactatgaaaagataata-aaaacatcacaattgaaataaaac 5041057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 447
Target Start/End: Complemental strand, 9163101 - 9162990
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaa 435  Q
    |||||| |||||||||||||||||||||||| |||||||| |   ||||||  |||||||  ||| |||||| ||||||||| ||||||||| |||||||    
T  9163101 ccttccccataccctatgggcacctaagtgcccatacccgtacttattaccaacactttaattataaaaagacaataaaaaacatcacaattaaaataaa 9163002  T
Q  436 accatgatccaa 447  Q
    || |||||||||    
T  9163001 actatgatccaa 9162990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 350 - 437
Target Start/End: Original strand, 19873111 - 19873197
Alignment:
Q  350 tatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||||| |||||||||| |||||||||| |||||||| |||||||| ||||||||||| ||| ||||| |||||||||||||||||||    
T  19873111 tatgggtacctaagtgcccatacccgcacccattacctgcactttaactatgaaaagacaat-aaaaacatcacaattgaaataaaac 19873197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 19618688 - 19618789
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||  |||||||||| |||||||||| ||||||||||||||||| |||||| || | || |||||| ||||||| ||||||||    
T  19618688 cccttccccataccctatggatacctaagtgcccatacccgcacccattacccgcactttaactatgataaaacaa-aaaaaacatcacaaatgaaataa 19618786  T
Q  435 aac 437  Q
    |||    
T  19618787 aac 19618789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 24987511 - 24987410
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || ||||| | |||||||||||||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  24987511 cccttccccataccctatgggtacttaagtacccatacccgcatccattacccgcactttaactatggaaaaacaa-aaaaaacatcacaaatgaaataa 24987413  T
Q  435 aac 437  Q
    |||    
T  24987412 aac 24987410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 336 - 462
Target Start/End: Original strand, 35732240 - 35732366
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaa 435  Q
    |||||| || ||||||||||||| ||||||| ||||||||||  |||||||| ||||||| | ||| ||||||||||||||  | |||| ||||||||||    
T  35732240 ccttccccagaccctatgggcacttaagtgcccatacccgcactcattacccacactttagccatggaaagataataaaaatcaccacacttgaaataaa 35732339  T
Q  436 accatgatccaaaattattcaaatcaa 462  Q
    || | |||||||| || || |||||||    
T  35732340 actaagatccaaatttttttaaatcaa 35732366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 343 - 447
Target Start/End: Original strand, 46819171 - 46819274
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatga 442  Q
    |||||||| |||| |||||||||||||||||| || | ||||||| ||||||| ||||||||| | ||| ||||| ||||||||||||||||||| |||     
T  46819171 cataccctgtgggtacctaagtgctcataccctcacctattacccacactttagctatgaaaaaagaat-aaaaacatcacaattgaaataaaactatgg 46819269  T
Q  443 tccaa 447  Q
    |||||    
T  46819270 tccaa 46819274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 481
Target Start/End: Complemental strand, 2150768 - 2150638
Alignment:
Q  350 tatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaa 449  Q
    |||||||||||||| || |||| ||| | ||||||| |||||||||  |||||||||| ||| ||||| ||||||||||||||||||| ||| || |||     
T  2150768 tatgggcacctaagggcccatagccgtacccattactcgcactttaattatgaaaagacaat-aaaaacatcacaattgaaataaaactatggtctaaat 2150670  T
Q  450 ttattcaaatcaattcatataatagtaggaat 481  Q
     | |||||||||| ||||| ||||||| ||||    
T  2150669 attttcaaatcaactcataaaatagtacgaat 2150638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 344 - 447
Target Start/End: Original strand, 5908243 - 5908346
Alignment:
Q  344 ataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgat 443  Q
    |||||||||| |||| ||||||| ||||||| || | ||||||||||||||| | || ||||||||||||||| || |||| ||||||||||||  ||||    
T  5908243 ataccctatgagcacttaagtgcccatacccacaccaattacccgcactttagccataaaaagataataaaaattaccacacttgaaataaaactgtgat 5908342  T
Q  444 ccaa 447  Q
    ||||    
T  5908343 ccaa 5908346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 39352464 - 39352564
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||| | |||||||||| ||||||| || ||||||||||||||||| ||||||||  | || |||||| ||||||| ||||||||    
T  39352464 cccttccccataccctatgagtacctaagtgcccatacccacacccattacccgcactttaactatgaaa--aaaaaaaaaaaaatcacaaatgaaataa 39352561  T
Q  435 aac 437  Q
    |||    
T  39352562 aac 39352564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 350 - 476
Target Start/End: Original strand, 42881357 - 42881481
Alignment:
Q  350 tatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaa 449  Q
    |||||||||||||||| ||||||| | |||||||||||| |||||| || | ||| || ||| ||||| ||||||||||||||||||| ||| | |||||    
T  42881357 tatgggcacctaagtggtcatacctgaatccattacccgtactttaactgtaaaaggacaat-aaaaacatcacaattgaaataaaactatggt-caaaa 42881454  T
Q  450 ttattcaaatcaattcatataatagta 476  Q
      ||||||||||| ||||| |||||||    
T  42881455 aaattcaaatcaactcataaaatagta 42881481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 364 - 473
Target Start/End: Original strand, 46584698 - 46584808
Alignment:
Q  364 tgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaa-atatcacaattgaaataaaaccatgatccaaaattattcaaatcaa 462  Q
    |||||||||  | |||||||||||||| |||| |||||||||||||||||||| ||  ||||||||||||||||| | | || |||||| ||||||||||    
T  46584698 tgctcatacgtgtatccattacccgcaatttaactatgaaaagataataaaaatatcacacaattgaaataaaacgacggtctaaaatttttcaaatcaa 46584797  T
Q  463 ttcatataata 473  Q
     ||||| ||||    
T  46584798 atcataaaata 46584808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 416
Target Start/End: Original strand, 51055465 - 51055543
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaa 416  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||| |||||||||| |||| ||| || ||||||||    
T  51055465 ttcctcataccctatgagcacctaagtgcacatacctgcatccattatccgcactttaactataaaaggacaataaaaa 51055543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 437
Target Start/End: Original strand, 11671773 - 11671841
Alignment:
Q  368 catacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||||    
T  11671773 catacccgcacccattacccgcactttaactatgaaaagacaat-aaaaacatcacaattgaaataaaac 11671841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 335 - 416
Target Start/End: Complemental strand, 38694918 - 38694837
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaa 416  Q
    ||||||| |||||||||||| ||| ||||||  ||||||||||  |||||||||||||||| | ||||||||||||||||||    
T  38694918 cccttccccataccctatggacacttaagtgtccatacccgcactcattacccgcactttagccatgaaaagataataaaaa 38694837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 50481168 - 50481073
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||| |||||||| |||| ||||| ||||||||||| |||||||||||||||| ||||||||       |||||||||||||| ||||||||    
T  50481168 cccttccccatagcctatgggtacctcagtgcccatacccgcattcattacccgcactttaactatgaaa-------aaaaaatatcacaaatgaaataa 50481076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 332 - 473
Target Start/End: Original strand, 19454785 - 19454928
Alignment:
Q  332 gtacccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaa-gataataaaaaatatc-acaattga 429  Q
    |||||||||| ||||| |||||||||| ||||||  |||| | ||| ||||||||| || |||| ||||||||| || ||||||||| | | ||||||||    
T  19454785 gtacccttccccatactctatgggcacttaagtgtccatatctgcacccattacccacattttaactatgaaaaagacaataaaaaaaacccacaattga 19454884  T
Q  430 aataaaaccatgatccaaaattattcaaatcaattcatataata 473  Q
    |||||||  |||||||||||   |||||||||| ||||| ||||    
T  19454885 aataaaattatgatccaaaaaatttcaaatcaactcataaaata 19454928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 383 - 462
Target Start/End: Original strand, 35203302 - 35203380
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaa 462  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| ||| | |||| || ||||||||||    
T  35203302 tacccgcactttaactatgaaaagacaataaaa-atatcacaattgaaataaaactatggttcaaattttttcaaatcaa 35203380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 477
Target Start/End: Complemental strand, 2013115 - 2013017
Alignment:
Q  379 ccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaattcatataatagtag 477  Q
    |||||| || |||||||  ||| |||||| ||||||||||||||||||||||||||||| |||||||||  || || ||| ||| ||||| ||||||||    
T  2013115 ccattatccacactttaattataaaaagacaataaaaaatatcacaattgaaataaaactatgatccaattttttttaaagcaactcataaaatagtag 2013017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 473
Target Start/End: Complemental strand, 22845233 - 22845097
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| || |||||| ||| |||||||||  ||| ||||||||||||| ||||| |||| ||||||||||| ||| ||||| |||||| |||||||||    
T  22845233 cccttccccacaccctacgggtacctaagtgtccatgcccgcatccatta-ccgcattttaactatgaaaagacaat-aaaaacatcacatttgaaataa 22845136  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataata 473  Q
    ||| ||| |||||| || || |||| || ||||| ||||    
T  22845135 aactatggtccaaatttttttaaattaactcataaaata 22845097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 467
Target Start/End: Original strand, 33099659 - 33099780
Alignment:
Q  345 taccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatc 444  Q
    ||||||||||| |||| ||||| |||  |||||  ||| |||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||| ||| |     
T  33099659 taccctatgggtaccttagtgcacattgccgcactcatcaccctcactttaactatgaaaagacaat-aaaaatatcacaattgaaataaaactatggtt 33099757  T
Q  445 caaaattattcaaatcaattcat 467  Q
    |||||   |||||||||| ||||    
T  33099758 caaaaaatttcaaatcaactcat 33099780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 41923972 - 41924074
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||| ||||||| || ||||||   ||||||||| ||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  41923972 cccttccccatactctatgggtacttaagtgtctatacccgcacccattacccgcactttaactatggaaaaacaaaaaaaaacatcacaaatgaaataa 41924071  T
Q  435 aac 437  Q
    |||    
T  41924072 aac 41924074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 405
Target Start/End: Original strand, 49359965 - 49360035
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaa 405  Q
    ||||||| ||||||||||||| |||| ||| | |||||||||| ||||||||||||||||| |||||||||    
T  49359965 cccttccccataccctatgggtacctcagtacccatacccgcacccattacccgcactttaactatgaaaa 49360035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 406
Target Start/End: Complemental strand, 23299622 - 23299554
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaag 406  Q
    |||| ||||||||||||| | |||||||| |||||||||| |||||||||||| |||| ||||||||||    
T  23299622 ttccccataccctatgggtatctaagtgcccatacccgcacccattacccgcattttaactatgaaaag 23299554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 13735731 - 13735661
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaa 405  Q
    ||||||| ||||||||||||| |||| |||||  ||||||||| ||||||| ||||||||| |||||||||    
T  13735731 cccttccccataccctatgggtacctcagtgccgatacccgcacccattactcgcactttaactatgaaaa 13735661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 335 - 401
Target Start/End: Complemental strand, 44792747 - 44792681
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatg 401  Q
    ||||||| ||||||||||||| || ||||| | |||||||||| ||||||||||||||||| |||||    
T  44792747 cccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttaactatg 44792681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 437
Target Start/End: Original strand, 12905619 - 12905719
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaa 435  Q
    |||||| || || ||||||| |||||||||   |||| |||| ||||||| ||||||||| |||||||| || || |||| |||||||||||||||||||    
T  12905619 ccttccccaaactctatgggtacctaagtgtctatactcgcacccattactcgcactttaactatgaaatgacaacaaaa-atatcacaattgaaataaa 12905717  T
Q  436 ac 437  Q
    ||    
T  12905718 ac 12905719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 436
Target Start/End: Original strand, 14418284 - 14418336
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  14418284 tacccgcactttaactatgaaaagataat-aaaaatatcacaattgaattaaaa 14418336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 25467489 - 25467593
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactt----tatctatgaaaagataataaaaaatatcacaattgaa 430  Q
    ||||||| |||| | |||||| | ||||||||||||||||||| |||||||||||| ||    || ||||||||| | ||| ||||| ||||||||||||    
T  25467489 cccttccccatatcttatgggtatctaagtgctcatacccgcacccattacccgcaatttaactaactatgaaaaaacaat-aaaaacatcacaattgaa 25467587  T
Q  431 ataaaa 436  Q
    ||||||    
T  25467588 ataaaa 25467593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 462
Target Start/End: Complemental strand, 30964640 - 30964531
Alignment:
Q  349 ctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaa 448  Q
    |||||| ||| |||||| ||||||| ||| |||||| ||||| |||||    ||||||||||||||||  | |||| |||||||||||| ||||||||||    
T  30964640 ctatggacacttaagtgttcatacctgcacccattatccgcaatttat----gaaaagataataaaaatcaccacacttgaaataaaactatgatccaaa 30964545  T
Q  449 attattcaaatcaa 462  Q
     || || |||||||    
T  30964544 tttttttaaatcaa 30964531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 462
Target Start/End: Complemental strand, 30980452 - 30980343
Alignment:
Q  349 ctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaa 448  Q
    |||||| ||| |||||| ||||||| ||| |||||| ||||| |||||    ||||||||||||||||  | |||| |||||||||||| ||||||||||    
T  30980452 ctatggacacttaagtgttcatacctgcacccattatccgcaatttat----gaaaagataataaaaatcaccacacttgaaataaaactatgatccaaa 30980357  T
Q  449 attattcaaatcaa 462  Q
     || || |||||||    
T  30980356 tttttttaaatcaa 30980343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 443
Target Start/End: Complemental strand, 33558846 - 33558787
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgat 443  Q
    ||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||| |||||    
T  33558846 tacccgcactttaactatgaaaagacaat-aaaaacatcacaattgaaataaaactatgat 33558787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 26795358 - 26795319
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcataccc 374  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  26795358 ccctttctcataccctatgggcacctaagtgctcataccc 26795319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 444
Target Start/End: Complemental strand, 50622315 - 50622253
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaat-atcacaattgaaataaaaccatgatc 444  Q
    ||||| ||||||| ||||||||||| |||||||||  ||||||||||||||||||| ||||||    
T  50622315 tacccacactttaactatgaaaagacaataaaaaaacatcacaattgaaataaaactatgatc 50622253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 449
Target Start/End: Complemental strand, 25630416 - 25630309
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccatta--cccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccat 440  Q
    |||||||||||||||||||||||| ||||  |  ||| ||||  ||| ||||||| ||||||||| | ||| ||||| ||||||||||||||||| | ||    
T  25630416 cataccctatgggcacctaagtgcccatattcctatcaattaccccctcactttaactatgaaaaaacaat-aaaaacatcacaattgaaataaacctat 25630318  T
Q  441 gatccaaaa 449  Q
    | |||||||    
T  25630317 ggtccaaaa 25630309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 447
Target Start/End: Original strand, 33118961 - 33119006
Alignment:
Q  402 aaaagataataaaaaatatcacaattgaaataaaaccatgatccaa 447  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||||    
T  33118961 aaaagacaataaaaaacatcacaattgaaataaaactatgatccaa 33119006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 449
Target Start/End: Original strand, 33333482 - 33333583
Alignment:
Q  348 cctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaa 447  Q
    ||||||| |||| ||||| ||||||  ||||||||||| |  |||||| |||||||||   | ||| ||| || |||||||||||||||| |||||||||    
T  33333482 cctatggccacccaagtgatcatacatgcatccattactcctactttaactatgaaaaacaagtaacaaacattacaattgaaataaaactatgatccaa 33333581  T
Q  448 aa 449  Q
    ||    
T  33333582 aa 33333583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 40563942 - 40564047
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccg----catccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaa 430  Q
    ||||||| ||||||||||| | | |||||||| |||| |||    |||  ||||||||||||||| | ||||||||| ||| ||||| ||||||||||||    
T  40563942 cccttccccataccctatgagtatctaagtgcccataaccgtacccattaattacccgcactttaacaatgaaaagaaaat-aaaaacatcacaattgaa 40564040  T
Q  431 ataaaac 437  Q
    |||||||    
T  40564041 ataaaac 40564047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 484
Target Start/End: Complemental strand, 26291742 - 26291704
Alignment:
Q  446 aaaattattcaaatcaattcatataatagtaggaatagt 484  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  26291742 aaaattattcgaatcaattcataaaatagtaggaatagt 26291704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 436
Target Start/End: Original strand, 27346619 - 27346672
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    |||||||||||||   ||||||||| ||||||||| | ||||||||||||||||    
T  27346619 tacccgcactttaatcatgaaaagacaataaaaaacaccacaattgaaataaaa 27346672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 395
Target Start/End: Original strand, 33118708 - 33118761
Alignment:
Q  342 tcataccctatgggcacctaagtgctcatacccgcatccattacccgcacttta 395  Q
    ||||||||||||| ||||||||||  |||||||  | |||||||||||||||||    
T  33118708 tcataccctatggacacctaagtgtccatacccatacccattacccgcacttta 33118761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 7e-47; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 1221809 - 1221682
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  1221809 cccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaagacaataaaaaatatcacaattgaaataa 1221710  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||||||| |||||||    
T  1221709 aactatgatccaaaattatttaaatcaa 1221682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 24447220 - 24447093
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  24447220 cccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataa 24447121  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||||||| |||||||    
T  24447120 aactatgatccaaaattatttaaatcaa 24447093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 335 - 474
Target Start/End: Original strand, 10499182 - 10499322
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataat-aaaaaatatcacaattgaaata 433  Q
    ||||||| |||| ||||||||||||||||| |||||| | ||| ||||||| ||||||||| ||||||||||| ||| |||||||||  || ||||||||    
T  10499182 cccttccccatatcctatgggcacctaagttctcatatcagcacccattacacgcactttaactatgaaaagacaataaaaaaatattgcagttgaaata 10499281  T
Q  434 aaaccatgatccaaaattattcaaatcaattcatataatag 474  Q
    ||||||||||||||||  ||||||||||||||||| |||||    
T  10499282 aaaccatgatccaaaaaaattcaaatcaattcataaaatag 10499322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 20691684 - 20691582
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| |||||||||| |||||||||| ||||||||||||||||| ||||||||| | || |||||| ||||||| ||||||||    
T  20691684 cccttccccataccctatgggtacctaagtgcccatacccgcacccattacccgcactttaactatgaaaaaacaaaaaaaaacatcacaaatgaaataa 20691585  T
Q  435 aac 437  Q
    |||    
T  20691584 aac 20691582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 9062241 - 9062114
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||| |||||||||| ||||||||||||||||| | ||| ||||||||||||||  | ||||  ||||||||    
T  9062241 cccttccccataccctatgggcacttaagtgcccatacccgcacccattacccgcactttagccatggaaagataataaaaatcaccacacatgaaataa 9062142  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||  |||||||||| || || |||||||    
T  9062141 aattatgatccaaatttttttaaatcaa 9062114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 338 - 447
Target Start/End: Original strand, 6337251 - 6337359
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||| ||||||||||||| |||||||||| |||||||||| | ||||||| ||||||| |||||||||   ||| ||||| |||||||||||||||||||    
T  6337251 ttccccataccctatgggtacctaagtgcccatacccgcacctattacccacactttagctatgaaaaaggaat-aaaaacatcacaattgaaataaaac 6337349  T
Q  438 catgatccaa 447  Q
     |||||||||    
T  6337350 tatgatccaa 6337359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 442
Target Start/End: Original strand, 6938059 - 6938162
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| |||||||||| |||||||||| ||   |||||||||||| ||||||||||| ||| ||||| ||||||||||||| ||    
T  6938059 cccttccccataccctatgggtacctaagtgcccatacccgcaccc---acccgcactttaactatgaaaagacaat-aaaaacatcacaattgaaacaa 6938154  T
Q  435 aaccatga 442  Q
    ||| ||||    
T  6938155 aactatga 6938162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 447
Target Start/End: Original strand, 28769896 - 28770004
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||| |||| |||||||| |||||||||  |||||||||| ||||||||||||||||| |||||||||   ||||||||| || ||||||||||||||||    
T  28769896 ttccccatatcctatgggtacctaagtgtccatacccgcacccattacccgcactttagctatgaaaaaggaataaaaaa-attacaattgaaataaaac 28769994  T
Q  438 catgatccaa 447  Q
     ||| |||||    
T  28769995 tatggtccaa 28770004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 481
Target Start/End: Complemental strand, 6338031 - 6337884
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaa-tatcacaattgaaata 433  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||| ||||    |||||||| |||||||||  | ||||| |||||||    
T  6338031 cccttccccataccctatgggcacctaagagctcatacccgcaccaattacccgcagtttaatactgaaaagacaataaaaaagcaccacaactgaaata 6337932  T
Q  434 aaaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
     ||  |||||||| ||   |||||||||| ||||| ||||||| ||||    
T  6337931 caattatgatccagaaaatttcaaatcaactcataaaatagtatgaat 6337884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 445
Target Start/End: Original strand, 31070823 - 31070919
Alignment:
Q  347 ccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatcc 445  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||||||| ||||||||| | |  |||||| |||| || ||||||||||||| |||||    
T  31070823 ccctatgggtacctaagtgcccatacccgcacccattacccgcactttaactatgaaaaaaca--aaaaaacatcataaatgaaataaaaccacgatcc 31070919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 396 - 481
Target Start/End: Complemental strand, 33960188 - 33960103
Alignment:
Q  396 tctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    |||||||||||| ||| ||||| ||||||||||||||||||| ||||| |||||||||| ||||||| | ||| ||||||| ||||    
T  33960188 tctatgaaaagacaatgaaaaacatcacaattgaaataaaactatgattcaaaattatttaaatcaactaataaaatagtacgaat 33960103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 485
Target Start/End: Original strand, 9350818 - 9350952
Alignment:
Q  350 tatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaa 449  Q
    ||||||||||| |||||||||||||||| | |||||| |||  ||| ||||||||||| ||| ||||||||||||||| |||| |||| ||| | || ||    
T  9350818 tatgggcaccttagtgctcatacccgcaacaattacctgcatgttaactatgaaaagaaaat-aaaaatatcacaattaaaattaaactatggttcataa 9350916  T
Q  450 ttattcaaatcaattcatataatagtaggaatagta 485  Q
    ||   |||||||| ||||| ||||||| | ||||||    
T  9350917 tttaacaaatcaactcataaaatagtacggatagta 9350952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 1329657 - 1329587
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaa 405  Q
    ||||||| ||||||||||||  |||||||||| ||||||| || ||||||||||||||||| |||||||||    
T  1329657 cccttccccataccctatggatacctaagtgcccatacccacacccattacccgcactttaactatgaaaa 1329587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 33331615 - 33331716
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || ||| | ||||||||||||  |||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  33331615 cccttccccataccctatgggtacttaattactcatacccgcactcattacccgcactttaactatggaaaaacaa-aaaaaacatcacaaatgaaataa 33331713  T
Q  435 aac 437  Q
    |||    
T  33331714 aac 33331716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 33328603 - 33328704
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || |||||   ||||||||||  |||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  33328603 cccttccccataccctatgggtacttaagtaaccatacccgcactcattacccgcactttaactatggaaaaacaa-aaaaaacatcacaaatgaaataa 33328701  T
Q  435 aac 437  Q
    |||    
T  33328702 aac 33328704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 436
Target Start/End: Original strand, 12429462 - 12429538
Alignment:
Q  359 ctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    |||||||  ||||||| ||  |||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||    
T  12429462 ctaagtgtccatacccacactcattacccgcactttaactatgaaaagacaat-aaaaacatcacaattgaaataaaa 12429538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 462
Target Start/End: Complemental strand, 6799486 - 6799407
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaa 462  Q
    ||||||||||||| | ||| ||||||||||||||| | |||| |||||||||||| |||||| ||| || || |||||||    
T  6799486 tacccgcactttagccatggaaagataataaaaaacaccacacttgaaataaaactatgatctaaatttttttaaatcaa 6799407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 31784068 - 31784026
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgca 377  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  31784068 cccttccccataccctatgggtacctaagtgctcatacccgca 31784026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 401
Target Start/End: Complemental strand, 13534284 - 13534221
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatg 401  Q
    |||| |||||| |||||| || ||||| | |||||||||| ||||||||||||||||| |||||    
T  13534284 ttccccataccatatgggtacttaagtacccatacccgcacccattacccgcactttaactatg 13534221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 7e-47; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 4289644 - 4289771
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  4289644 cccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaagacaataaaaaatatcacaattgaaataa 4289743  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||||||| |||||||    
T  4289744 aactatgatccaaaattatttaaatcaa 4289771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 15234311 - 15234442
Alignment:
Q  332 gtacccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaat-atcacaattgaa 430  Q
    ||||||| |||||||||||||||||||  |||||||||| |||||| ||| ||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  15234311 gtaccctacctcataccctatgggcacaaaagtgctcattcccgcacccaatacccgcactttatctatgaaaagaaaataaaaaatcatcacaattgaa 15234410  T
Q  431 ataaaaccatgatccaaaattattcaaatcaa 462  Q
    | ||||| ||||||||||||||||||||||||    
T  15234411 acaaaactatgatccaaaattattcaaatcaa 15234442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 335 - 468
Target Start/End: Complemental strand, 29546196 - 29546061
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataat--aaaaaatatcacaattgaaat 432  Q
    ||||||| |||||||||||||||||||||||  |||||||||| |||||||||||| |||| ||||||||||| |||  |||||| | ||| ||||||||    
T  29546196 cccttccccataccctatgggcacctaagtgtccatacccgcacccattacccgcattttaactatgaaaagacaataaaaaaaaaaccacgattgaaat 29546097  T
Q  433 aaaaccatgatccaaaattattcaaatcaattcata 468  Q
    ||||| |||||||||||   |||||||||| |||||    
T  29546096 aaaactatgatccaaaaagtttcaaatcaactcata 29546061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 332 - 447
Target Start/End: Complemental strand, 39767234 - 39767119
Alignment:
Q  332 gtacccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaa 431  Q
    |||| |||||||||||||||| |||||||||||||||||||| | | ||||||||| |||||||  ||| |||| | ||||||||||||| |||||||||    
T  39767234 gtactcttcctcataccctataggcacctaagtgctcatacctgtacccattacccacactttaattataaaaatacaataaaaaatatcgcaattgaaa 39767135  T
Q  432 taaaaccatgatccaa 447  Q
    |||||| |||||||||    
T  39767134 taaaactatgatccaa 39767119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 668071 - 667970
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||| |||||||| |||||||||| |||||||||| |||||| |||||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  668071 cccttccccatatcctatgggtacctaagtgcccatacccgcacccattatccgcactttaactatgaaaagacaat-aaaaatatcacaattgaaataa 667973  T
Q  435 aac 437  Q
    |||    
T  667972 aac 667970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 35048627 - 35048754
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||| ||||||||||| ||||||| |||||||||| ||||||||||||||||| | ||| ||||||||||||||  | |||| |||||||||    
T  35048627 cccttccccatatcctatgggcacttaagtgcccatacccgcacccattacccgcactttagccatggaaagataataaaaatcaccacacttgaaataa 35048726  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| | |||||||| || || |||||||    
T  35048727 aactacgatccaaatttttttaaatcaa 35048754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 337 - 481
Target Start/End: Original strand, 29155322 - 29155465
Alignment:
Q  337 cttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    ||||| ||||||||||||| ||| |||||| | |||||||| ||||||||||||||||| |||||||||||  || ||||| ||||||||||||||||||    
T  29155322 cttccccataccctatgggtacccaagtgcccgtacccgcacccattacccgcactttaactatgaaaaga-cattaaaaacatcacaattgaaataaaa 29155420  T
Q  437 ccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    | ||| |||||  || || |||| || ||||| ||||||| ||||    
T  29155421 ctatggtccaattttttttaaattaactcataaaatagtatgaat 29155465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 23231735 - 23231838
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagat-aataaaaaatatcacaattgaaata 433  Q
    ||||||| ||||||||||||| || ||||||| |||||||||| ||||||||||||||||| ||||||||| || || |||||| ||||||| |||||||    
T  23231735 cccttccccataccctatgggtacttaagtgcccatacccgcacccattacccgcactttaactatgaaaaaataaaaaaaaaacatcacaaatgaaata 23231834  T
Q  434 aaac 437  Q
    ||||    
T  23231835 aaac 23231838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 4592294 - 4592193
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||||| |||| |||||| |||||||||  ||| | |||| ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  4592294 cccttcctcgtaccttatgggtacctaagtgtccatgctcgcacccattacccgcactttaactatgaaaagaaaat-aaaaatatcacaattgaaataa 4592196  T
Q  435 aac 437  Q
    |||    
T  4592195 aac 4592193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 336 - 473
Target Start/End: Complemental strand, 41935624 - 41935486
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaa-tatcacaattgaaataa 434  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||  | |||||||| |||||||||  | ||||| |||||||     
T  41935624 ccttcctcataccctatgggcacctaagtgctcatacccgcacccattacccacagtttaattctgaaaagacaataaaaaagcaccacaactgaaatac 41935525  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataata 473  Q
    ||| || ||||| ||   |||||||||| ||||| ||||    
T  41935524 aactataatccagaaaatttcaaatcaactcataaaata 41935486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 473
Target Start/End: Original strand, 18974709 - 18974846
Alignment:
Q  337 cttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaata-tcacaattgaaataaa 435  Q
    ||||| |||||||||||||||| || |||| |||| ||||| |||||| ||||| ||||  |||||||||| ||||||||| |  |||||||||||||||    
T  18974709 cttccccataccctatgggcacttaggtgcccatatccgcacccattatccgcattttaattatgaaaagacaataaaaaaaacccacaattgaaataaa 18974808  T
Q  436 accatgatccaaaattattcaaatcaattcatataata 473  Q
    || |||||||||||   |||||||||| ||||| ||||    
T  18974809 actatgatccaaaaaatttcaaatcaactcataaaata 18974846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 343 - 462
Target Start/End: Complemental strand, 8027544 - 8027424
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattaccc-gcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatg 441  Q
    |||||||||||||||| ||||| | |||||||||| ||||||||| |||||||| | ||| ||||||||||||||  | |||| |||||||||||  |||    
T  8027544 cataccctatgggcacttaagtacccatacccgcacccattaccccgcactttagccatggaaagataataaaaatcaccacacttgaaataaaagtatg 8027445  T
Q  442 atccaaaattattcaaatcaa 462  Q
    |||||||||| || |||||||    
T  8027444 atccaaaattttttaaatcaa 8027424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 360 - 448
Target Start/End: Original strand, 42969053 - 42969141
Alignment:
Q  360 taagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaa 448  Q
    ||||||| |||| ||||||||||||||||||||||| | ||| ||||||||||||||  |||||| |||||||||||| ||||||||||    
T  42969053 taagtgcccatatccgcatccattacccgcactttagcgatggaaagataataaaaatcatcacacttgaaataaaactatgatccaaa 42969141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 336 - 462
Target Start/End: Complemental strand, 16711442 - 16711317
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaa 435  Q
    |||||||||||||||||| |||| ||||||| |||||||| | |||||| |||| |||||  |||||||||| ||| ||||| |||| ||||||||||||    
T  16711442 ccttcctcataccctatgagcacttaagtgcccatacccgtacccattatccgctctttaaatatgaaaagacaat-aaaaacatcataattgaaataaa 16711344  T
Q  436 accatgatccaaaattattcaaatcaa 462  Q
    || ||| ||| ||| | ||||||||||    
T  16711343 actatggtcccaaagttttcaaatcaa 16711317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 343 - 437
Target Start/End: Complemental strand, 31440728 - 31440635
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||||||| | |||||||||| |||||||||| ||||||||||||||||| ||||||||| | || |||||| ||||||| |||||||||||    
T  31440728 cataccctatgtgtacctaagtgcccatacccgcacccattacccgcactttaactatgaaaaaacaa-aaaaaacatcacaaatgaaataaaac 31440635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 447
Target Start/End: Complemental strand, 40507701 - 40507620
Alignment:
Q  366 ctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaa 447  Q
    |||||||||| |||||||| | ||||||||  ||| |||||| |||||||||||||||||||||||||||| ||||||||||    
T  40507701 ctcatacccgtatccattatctgcactttaattataaaaagacaataaaaaatatcacaattgaaataaaatcatgatccaa 40507620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 4481060 - 4481163
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctat-gaaaagataataaaaaatatcacaattgaaata 433  Q
    ||||||| ||||||||||||| || ||||||  |||||||||| ||||||||||||||||| |||| |||||   || |||||||||||||| |||||||    
T  4481060 cccttccccataccctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatggaaaaacaaaaaaaaaatatcacaaatgaaata 4481159  T
Q  434 aaac 437  Q
    ||||    
T  4481160 aaac 4481163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 458
Target Start/End: Original strand, 9205182 - 9205301
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||| | |||||||||| ||||||||||||||||| ||||| |||| ||||||||    || |||||| ||||||| ||||||||    
T  9205182 cccttccccataccctatgagtacctaagtgcccatacccgcatccattatccgcattttaactatgaaa----aaaaaaaaacatcacaaatgaaataa 9205277  T
Q  435 aaccatgatccaaaattattcaaa 458  Q
    ||| | ||||| || || ||||||    
T  9205278 aactacgatcccaattttttcaaa 9205301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 13142672 - 13142571
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||| | || ||||| | |||||||||||||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  13142672 cccttccccataccctatgagtacttaagtacccatacccgcatccattacccgcactttaactatggaaaaacaa-aaaaaacatcacaaatgaaataa 13142574  T
Q  435 aac 437  Q
    |||    
T  13142573 aac 13142571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 25424758 - 25424860
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || || || | |||||||||| ||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  25424758 cccttccccataccctatgggtacttaggtacccatacccgcacccattacccgcactttaactatggaaaaacaaaaaaaaacatcacaaatgaaataa 25424857  T
Q  435 aac 437  Q
    |||    
T  25424858 aac 25424860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 32422841 - 32422740
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || ||||| | |||||||||| ||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  32422841 cccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttaactatggaaaaacaa-aaaaaacatcacaaatgaaataa 32422743  T
Q  435 aac 437  Q
    |||    
T  32422742 aac 32422740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 33867646 - 33867544
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || || || | |||||||||| ||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  33867646 cccttccccataccctatgggtacttaggtacccatacccgcacccattacccgcactttaactatggaaaaacaaaaaaaaacatcacaaatgaaataa 33867547  T
Q  435 aac 437  Q
    |||    
T  33867546 aac 33867544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 336 - 481
Target Start/End: Original strand, 2656803 - 2656948
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaa 435  Q
    |||||| ||||||||||||| || ||||||  ||||||| ||  ||||||| |||||||| | || |||||| ||||||||| | || ||||||||||||    
T  2656803 ccttccccataccctatgggtacttaagtgtccatacccacacacattacctgcactttaaccatcaaaagacaataaaaaacaccataattgaaataaa 2656902  T
Q  436 accatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    |  |||||||||||   |||||||||| | ||| ||||||| ||||    
T  2656903 attatgatccaaaaaatttcaaatcaactaataaaatagtatgaat 2656948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 10391683 - 10391618
Alignment:
Q  397 ctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaa 462  Q
    ||||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||| |||||||    
T  10391683 ctatgaaaagacaataaaaaacatcacaattgaaataaaactaggatccaaaattatttaaatcaa 10391618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 448
Target Start/End: Complemental strand, 40475352 - 40475272
Alignment:
Q  368 catacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaa 448  Q
    |||||||| | |||||| | ||||||||  ||| |||||| |||||||||||||||||||||||||||| |||||||||||    
T  40475352 catacccgtacccattatctgcactttaattataaaaagacaataaaaaatatcacaattgaaataaaatcatgatccaaa 40475272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 338 - 445
Target Start/End: Original strand, 3329198 - 3329305
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||| ||||| ||||||| |||||||||   ||||||||| ||||||||| ||||||| ||||||||| | || |||||| || |||| |||||||||||    
T  3329198 ttccccatactctatgggtacctaagtgtctatacccgcacccattacccacactttaactatgaaaaaaaaaaaaaaaacattacaaatgaaataaaac 3329297  T
Q  438 catgatcc 445  Q
     |||||||    
T  3329298 tatgatcc 3329305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 405
Target Start/End: Original strand, 30241441 - 30241503
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaa 405  Q
    ||||||||||||| |||||||||| ||||| |||| ||||||||||||||||| |||||||||    
T  30241441 cataccctatgggtacctaagtgcccatactcgcacccattacccgcactttaactatgaaaa 30241503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 38620396 - 38620497
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || |||||   |||||||||| ||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  38620396 cccttccccataccctatgggtacttaagtatccatacccgcacccattacccgcactttaactatggaaaaacaa-aaaaaacatcacaaatgaaataa 38620494  T
Q  435 aac 437  Q
    |||    
T  38620495 aac 38620497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 437
Target Start/End: Complemental strand, 17154245 - 17154146
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaa 435  Q
    |||||| ||||||||||||  |||| | ||| |||||||||| | |||| | ||| |||| ||||||||||| |||||||| ||||||||||||||||||    
T  17154245 ccttccccataccctatggt-accttaatgcccatacccgcaccaattatctgcattttaactatgaaaagacaataaaaa-tatcacaattgaaataaa 17154148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 437
Target Start/End: Original strand, 20937062 - 20937150
Alignment:
Q  348 cctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||||||| |||||||||  ||||||||||   ||||||| |||||||  |||||||||| ||||||||  |||||||||||||||||||    
T  20937062 cctatgggtacctaagtgtccatacccgcacttattacccacactttaattatgaaaagacaataaaaac-atcacaattgaaataaaac 20937150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 437
Target Start/End: Complemental strand, 35005552 - 35005459
Alignment:
Q  345 taccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaa-aaatatcacaattgaaataaaac 437  Q
    |||| ||| |||||||||||||  ||||||  ||||||||||| |||||||  |||||||||| |||||| ||| | |||||||||||||||||    
T  35005552 taccatattggcacctaagtgcctatacccatatccattacccacactttaaatatgaaaagacaataaacaaacaccacaattgaaataaaac 35005459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 462
Target Start/End: Complemental strand, 12345593 - 12345514
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaa 462  Q
    ||||||||||||| | ||| ||||||||||||||  | |||| |||||||||||| |||||||||| || || |||||||    
T  12345593 tacccgcactttagccatggaaagataataaaaatcaccacacttgaaataaaactatgatccaaatttttttaaatcaa 12345514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 393
Target Start/End: Original strand, 15161991 - 15162049
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactt 393  Q
    |||||||  ||||||||||||||| ||||||| |||||||||| ||||||||| |||||    
T  15161991 cccttccctataccctatgggcacttaagtgcccatacccgcacccattacccacactt 15162049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 437
Target Start/End: Original strand, 12757815 - 12757871
Alignment:
Q  380 cattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||||||||||||  |||||||||| ||| ||||||||||||| |||||||||||    
T  12757815 cattacccgcactttaattatgaaaagacaat-aaaaatatcacaaatgaaataaaac 12757871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 462
Target Start/End: Original strand, 11788662 - 11788741
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaa 462  Q
    |||||||| |||| | ||| ||||||||||||||  | |||| |||||||||||| |||||||||| || || |||||||    
T  11788662 tacccgcattttagccatggaaagataataaaaatcaccacacttgaaataaaactatgatccaaatttttttaaatcaa 11788741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 445
Target Start/End: Original strand, 8753893 - 8753958
Alignment:
Q  380 cattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatcc 445  Q
    ||||| ||||||| || | ||||||||| ||||||||| | ||||||||||||||||  |||||||    
T  8753893 cattatccgcactataaccatgaaaagacaataaaaaacaccacaattgaaataaaattatgatcc 8753958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 26643 - 26770
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||||||||||| || |||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  26643 cccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgacaagacaataaaaaatatcacaattgaaataa 26742  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||||||| |||||||    
T  26743 aactatgatccaaaattatttaaatcaa 26770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 2e-44; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 17172319 - 17172192
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  17172319 cccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataa 17172220  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||||||| |||||||    
T  17172219 aactatgatccaaaattatttaaatcaa 17172192  T

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Target: chr7; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 343 - 476
Target Start/End: Complemental strand, 40789623 - 40789490
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatga 442  Q
    |||||||||||||||| ||||||| ||||||||||  ||||||||||||||| |||||||||| | ||||||||| ||||||||||||||||||| ||||    
T  40789623 cataccctatgggcacttaagtgcccatacccgcactcattacccgcactttctctatgaaaaaacaataaaaaacatcacaattgaaataaaactatga 40789524  T
Q  443 tccaaaattattcaaatcaattcatataatagta 476  Q
    |||||||||||| ||||||| | ||| |||||||    
T  40789523 tccaaaattatttaaatcaactaataaaatagta 40789490  T

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Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 481
Target Start/End: Original strand, 30391574 - 30391708
Alignment:
Q  347 ccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatcca 446  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||||||| | ||||||||| ||||||||| | ||||||||||||||||||||||||||    
T  30391574 ccctatgggcacttaagtgcccatacccgcatccattatccgcactttaaccatgaaaagacaataaaaaacagcacaattgaaataaaaccatgatcca 30391673  T
Q  447 aaattattcaaatcaattcatataatagtaggaat 481  Q
    |||   |||||||||| ||||| ||||||| ||||    
T  30391674 aaaaatttcaaatcaactcataaaatagtatgaat 30391708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 335 - 481
Target Start/End: Original strand, 44300727 - 44300873
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||| | ||||||||| ||||||| |||||| ||| || ||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  44300727 cccttccccatatcttatgggcacttaagtgcccatacctgcacccgttacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataa 44300826  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||| |||||||||||||||| ||||||| | ||| ||||||| ||||    
T  44300827 aactatgatccaaaattatttaaatcaactaataaaatagtacgaat 44300873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 335 - 481
Target Start/End: Complemental strand, 48558784 - 48558638
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||| ||| ||||||  |||| ||||||||||||||||||||||| | ||||||||| ||||||||| | |||| |||||||||    
T  48558784 cccttccccataccctatggccacttaagtgtccatatccgcatccattacccgcactttaaccatgaaaagacaataaaaaacagcacagttgaaataa 48558685  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    |||||||||||||||   |||||||||| ||||| ||||||| ||||    
T  48558684 aaccatgatccaaaaaatttcaaatcaactcataaaatagtatgaat 48558638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 40342416 - 40342289
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||| |||| ||||||||||| |||||||||   ||||||||||||||    
T  40342416 cccttccccataccctataggcacctaagtgcccatacccccatccattacccgcattttaactatgaaaagacaataaaaaaacccacaattgaaataa 40342317  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||   ||||||||||    
T  40342316 aactatgatccaaaaaatttcaaatcaa 40342289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 335 - 481
Target Start/End: Original strand, 2959949 - 2960095
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||| || ||||||||||||||||  ||||||| |||| ||||||||||||||| |||||||| || ||||||||| ||||||||||||||||    
T  2959949 cccttccccattccgtatgggcacctaagtgtccatacccacatctattacccgcactttaactatgaaatgacaataaaaaacatcacaattgaaataa 2960048  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||  |||||||||||   |||||||||| ||||| ||||||| ||||    
T  2960049 aattatgatccaaaaaatttcaaatcaactcataaaatagtacgaat 2960095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 337 - 437
Target Start/End: Complemental strand, 43702512 - 43702413
Alignment:
Q  337 cttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||    
T  43702512 cttccccataccctatgggtacctaagtgcccatacccgcatccattacccgcactttaactatgaaaagacaat-aaaaacatcacaattgaaataaaa 43702414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 19805052 - 19805153
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||| | || |||||||||||||| ||||||||    
T  19805052 cccttccccataccctatgggtacctaagtgctcatacccgcacccattacccgcactttaactatgaaaaaacaa-aaaaaatatcacaaatgaaataa 19805150  T
Q  435 aac 437  Q
    |||    
T  19805151 aac 19805153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 335 - 473
Target Start/End: Complemental strand, 1876143 - 1876003
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaata--tcacaattgaaat 432  Q
    ||||||| |||||||||||||||||||||||| |||||||||| |||||||||||| |||| ||||||||||| ||||||||| |   | ||||||||||    
T  1876143 cccttccccataccctatgggcacctaagtgcccatacccgcacccattacccgcattttaactatgaaaagacaataaaaaaaaacccgcaattgaaat 1876044  T
Q  433 aaaaccatgatccaaaattattcaaatcaattcatataata 473  Q
    ||||  |||||||||||   |||||||||| ||||| ||||    
T  1876043 aaaattatgatccaaaaaatttcaaatcaactcataaaata 1876003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 338 - 476
Target Start/End: Complemental strand, 28067368 - 28067230
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||||||||||||||||| || ||||||| |||||| ||| |||||||| |||||||| | ||||||||| ||||||||| | ||||||||||||||||     
T  28067368 ttcctcataccctatgggtacttaagtgcccatacctgcacccattacctgcactttaaccatgaaaagacaataaaaaacaccacaattgaaataaaat 28067269  T
Q  438 catgatccaaaattattcaaatcaattcatataatagta 476  Q
     |||||||||||   |||||||||| | ||| |||||||    
T  28067268 tatgatccaaaaaatttcaaatcaactaataaaatagta 28067230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 335 - 447
Target Start/End: Complemental strand, 5924170 - 5924057
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaa-tatcacaattgaaata 433  Q
    ||||||| |||||||| ||||||||||||||  |||||| ||| ||||||||||||||||| ||||||||||| |||||||||  |||||||||||||||    
T  5924170 cccttccccataccctgtgggcacctaagtgtccatacctgcacccattacccgcactttaactatgaaaagacaataaaaaagcatcacaattgaaata 5924071  T
Q  434 aaaccatgatccaa 447  Q
    |||| || ||||||    
T  5924070 aaactataatccaa 5924057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 335 - 447
Target Start/End: Complemental strand, 36074224 - 36074112
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||||||||||| |||||||| | |||||||||||||||||  ||| || ||| ||| ||||| ||||||||||||||||    
T  36074224 cccttccccataccctatgggcacctaagtgcccatacccgtacccattacccgcactttaattataaatagacaattaaaaacatcacaattgaaataa 36074125  T
Q  435 aaccatgatccaa 447  Q
    ||  |||||||||    
T  36074124 aattatgatccaa 36074112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 485
Target Start/End: Complemental strand, 38470022 - 38469869
Alignment:
Q  332 gtacccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaa 431  Q
    |||||||||| ||||||| |||||||| ||||||| |||||||||| ||||||||||||||||| || | |||| | ||||||||| | ||||||| |||    
T  38470022 gtacccttccccatacccaatgggcacttaagtgcccatacccgcacccattacccgcactttaactgtaaaaatacaataaaaaacaccacaattaaaa 38469923  T
Q  432 taaaaccatgatccaaaattattcaaatcaattcatataatagtaggaatagta 485  Q
    |||||| || ||||| ||   |||||||||| | ||| |||||||  |||||||    
T  38469922 taaaactataatccataaaatttcaaatcaacttataaaatagtacaaatagta 38469869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 481
Target Start/End: Original strand, 11244038 - 11244185
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattg-aaata 433  Q
    ||||||| |||| |||||||| |||||||| | |||||||||| |||||| |  || |||| ||||||||||| ||||||| |||||||||||| |||||    
T  11244038 cccttccccatatcctatgggtacctaagtacccatacccgcacccattatcaacattttaactatgaaaagacaataaaatatatcacaattgaaaata 11244137  T
Q  434 aaaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    |||| ||| ||| ||| | |||||||||| ||||| ||||||| ||||    
T  11244138 aaactatggtcccaaaattttcaaatcaactcataaaatagtaagaat 11244185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 26299167 - 26299294
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||  |||||||||| | |||| ||||||||||   ||||||||||||||||||  |||||| ||| |||||    
T  26299167 cccttccccataccctatgggcacttaagtgtccatacccgcaccaattatccgcactttagtcatgaaaagataataaaaatcatcacatttgtaataa 26299266  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||| || || |||||||    
T  26299267 aactatgatccaaatttttttaaatcaa 26299294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 33978839 - 33978966
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||| ||||||||| ||||||| |||||||||| |||||| |||||||||| | ||  ||||||||||||||  | |||| |||||||||    
T  33978839 cccttccccataccgtatgggcacataagtgcccatacccgcacccattatccgcactttagccattgaaagataataaaaatcaccacacttgaaataa 33978938  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||| || || |||||||    
T  33978939 aactatgatccaaatttttttaaatcaa 33978966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 43224332 - 43224432
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| | |||||||| |||||| ||| ||||||||||||||||| ||||||||| | ||| ||||| ||||||||||||||||    
T  43224332 cccttccccataccctatgggtatctaagtgcccatacctgcacccattacccgcactttaactatgaaaaaacaat-aaaaacatcacaattgaaataa 43224430  T
Q  435 aa 436  Q
    ||    
T  43224431 aa 43224432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 10066359 - 10066256
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaaga-taataaaaaatatcacaattgaaata 433  Q
    ||||||| |||||||||| || |||||||||| |||||||||| ||||||||||||||||| ||||||||| |  || |||||| ||||||| |||||||    
T  10066359 cccttccccataccctataggtacctaagtgcccatacccgcacccattacccgcactttaactatgaaaaaacaaaaaaaaaacatcacaaatgaaata 10066260  T
Q  434 aaac 437  Q
    ||||    
T  10066259 aaac 10066256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 481
Target Start/End: Original strand, 45112216 - 45112355
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataat-aaaaaatatcacaattgaaataaaaccatg 441  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| | |||| || |||||||| ||| |||||  | ||||| ||||||| ||  |||    
T  45112216 cataccctatgggcacctaagtgctcatacccgcacccattacccgtagtttaactctgaaaagacaatgaaaaagcaccacaactgaaatacaattatg 45112315  T
Q  442 atccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||||| ||   |||||||||| ||||| ||||||| ||||    
T  45112316 atccataaaatttcaaatcaactcataaaatagtatgaat 45112355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 417
Target Start/End: Original strand, 36072619 - 36072701
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaa 417  Q
    ||||||| |||||||||||||||||||||||| |||||||||| | |||||||||| |||| || |||||||| |||||||||    
T  36072619 cccttccccataccctatgggcacctaagtgcccatacccgcaccaattacccgcaatttaactctgaaaagacaataaaaaa 36072701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 343 - 435
Target Start/End: Complemental strand, 30738726 - 30738635
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaa 435  Q
    ||||| ||||||| |||||||||| ||||||| || |||||||| |||||||| ||||||||||| ||| ||||| |||||||||||||||||    
T  30738726 catacgctatgggtacctaagtgcccatacccacacccattacctgcactttaactatgaaaagacaat-aaaaacatcacaattgaaataaa 30738635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 16567581 - 16567682
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || ||||| | |||||||||| ||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  16567581 cccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttaactatggaaaaacaa-aaaaaacatcacaaatgaaataa 16567679  T
Q  435 aac 437  Q
    |||    
T  16567680 aac 16567682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 16598081 - 16597980
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || ||||| | |||||||||| ||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  16598081 cccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttaactatggaaaaacaa-aaaaaacatcacaaatgaaataa 16597983  T
Q  435 aac 437  Q
    |||    
T  16597982 aac 16597980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 46181227 - 46181328
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || ||||| | |||||||||| ||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  46181227 cccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttaactatggaaaaacaa-aaaaaacatcacaaatgaaataa 46181325  T
Q  435 aac 437  Q
    |||    
T  46181326 aac 46181328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 448
Target Start/End: Complemental strand, 3551624 - 3551521
Alignment:
Q  344 ataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgat 443  Q
    |||||||||| | |||||||||  |||||||| ||||||||||| ||||||| ||||||||||| |||  |||| ||||||||||||||| ||| ||| |    
T  3551624 ataccctatgagtacctaagtgtccatacccgtatccattacccacactttaactatgaaaagacaat-gaaaacatcacaattgaaatagaactatggt 3551526  T
Q  444 ccaaa 448  Q
    |||||    
T  3551525 ccaaa 3551521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 380 - 447
Target Start/End: Original strand, 7376603 - 7376670
Alignment:
Q  380 cattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaa 447  Q
    |||||||||||  |||  ||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  7376603 cattacccgcaagttaattataaaaagataataaaaaatatcacaattgaaataaaactatgatccaa 7376670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 360 - 447
Target Start/End: Original strand, 16561988 - 16562075
Alignment:
Q  360 taagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaa 447  Q
    ||||||||||||||| |  ||||||||| ||||||| | ||||||||||||||||||  | |||| |||||||||||| |||||||||    
T  16561988 taagtgctcatacccccgcccattacccacactttagccatgaaaagataataaaaatcaccacacttgaaataaaactatgatccaa 16562075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 360 - 447
Target Start/End: Complemental strand, 16603674 - 16603587
Alignment:
Q  360 taagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaa 447  Q
    ||||||||||||||| |  ||||||||| ||||||| | ||||||||||||||||||  | |||| |||||||||||| |||||||||    
T  16603674 taagtgctcatacccccgcccattacccacactttagccatgaaaagataataaaaatcaccacacttgaaataaaactatgatccaa 16603587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 437
Target Start/End: Complemental strand, 5023284 - 5023188
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatg--aaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||||||||| |||||||||| |||||||||| ||||| |||| |||||| |||||  |||| | || |||||| ||||||| |||||||||||    
T  5023284 cataccctatgggtacctaagtgcccatacccgcacccattgcccgtactttaactatgaaaaaacaaaaaaaaaaacatcacaaatgaaataaaac 5023188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 336 - 378
Target Start/End: Complemental strand, 9355261 - 9355219
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcat 378  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  9355261 ccttcctcataccctatgggcacttaagtgctcatacccgcat 9355219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 335 - 481
Target Start/End: Complemental strand, 25309613 - 25309469
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||| | ||||||| | || |||| ||||||| ||| ||| ||||||||||||| ||| || |||| ||| |||||||||||||| |||||||    
T  25309613 cccttccacattctctatgggtatcttagtgttcatacctgcacccactacccgcactttaactacgagaagacaat-aaaaatatcacaatggaaataa 25309515  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||| ||| | ||||| | |||||||||| ||||| || |||| ||||    
T  25309514 aactatggttcaaaaat-ttcaaatcaactcataaaaaagtatgaat 25309469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 335 - 405
Target Start/End: Original strand, 27398594 - 27398664
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaa 405  Q
    ||||||| ||||||||||||  || ||||||| |||||||||| ||||||||| ||||||| |||||||||    
T  27398594 cccttccccataccctatggatacttaagtgcccatacccgcacccattacccacactttaactatgaaaa 27398664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 447
Target Start/End: Complemental strand, 12499664 - 12499591
Alignment:
Q  374 cgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaa 447  Q
    |||| ||||||||||||||||| | ||||||||||||||||||  | |||| |||||||||||  |||||||||    
T  12499664 cgcacccattacccgcactttagccatgaaaagataataaaaatcaccacacttgaaataaaattatgatccaa 12499591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 442
Target Start/End: Original strand, 42284521 - 42284625
Alignment:
Q  337 cttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    ||||| |||| | |||||| | |||| ||| ||||| |||| |||||| || ||||||| ||||||||||| ||| ||||| ||||||||||||||||||    
T  42284521 cttccccatatcatatgggtatctaaatgcacatactcgcacccattatccacactttaactatgaaaagacaat-aaaaacatcacaattgaaataaaa 42284619  T
Q  437 ccatga 442  Q
    | ||||    
T  42284620 ctatga 42284625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 447
Target Start/End: Original strand, 9223691 - 9223755
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaa 447  Q
    ||||||||||||| | ||||||||||||||||||  | |||| |||||||||||| |||||||||    
T  9223691 tacccgcactttagcaatgaaaagataataaaaatcaccacacttgaaataaaactatgatccaa 9223755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 343 - 437
Target Start/End: Original strand, 31454920 - 31455015
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaaga-taataaaaaatatcacaattgaaataaaac 437  Q
    ||||||| ||||| || ||||||  ||||||| || ||||||||||||||||| ||||||||| |  || |||||| ||||||| |||||||||||    
T  31454920 catacccaatgggtacttaagtgtccatacccacacccattacccgcactttaactatgaaaaaacaaaaaaaaaacatcacaaatgaaataaaac 31455015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 437
Target Start/End: Original strand, 9477708 - 9477761
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||||    
T  9477708 tacccgcactttaactatgaaaagacaat-aaaaacatcacaattgaaataaaac 9477761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 33067533 - 33067480
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||    
T  33067533 tacccgcactttagcaatgaaaagacaataaaaa-tatcacaattgaaataaaac 33067480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 393
Target Start/End: Complemental strand, 34152457 - 34152399
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactt 393  Q
    ||||||| |||||||||||| ||| ||||||| |||||||||| ||||||||| |||||    
T  34152457 cccttccccataccctatggacacttaagtgcccatacccgcacccattacccacactt 34152399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 393
Target Start/End: Original strand, 34174667 - 34174725
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactt 393  Q
    ||||||| |||||||||||| ||| ||||||| |||||||||| ||||||||| |||||    
T  34174667 cccttccccataccctatggacacttaagtgcccatacccgcacccattacccacactt 34174725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 446
Target Start/End: Complemental strand, 38398499 - 38398422
Alignment:
Q  368 catacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatcca 446  Q
    |||||| |||||| |||||  ||||||| ||||||||||| ||| ||||| || |||||||||||||||| ||||||||    
T  38398499 catacctgcatccgttacctacactttaactatgaaaagacaat-aaaaacattacaattgaaataaaactatgatcca 38398422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 446
Target Start/End: Complemental strand, 38401041 - 38400964
Alignment:
Q  368 catacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatcca 446  Q
    |||||| |||||| |||||  ||||||| ||||||||||| ||| ||||| || |||||||||||||||| ||||||||    
T  38401041 catacctgcatccgttacctacactttaactatgaaaagacaat-aaaaacattacaattgaaataaaactatgatcca 38400964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 405
Target Start/End: Original strand, 3363003 - 3363040
Alignment:
Q  368 catacccgcatccattacccgcactttatctatgaaaa 405  Q
    |||||||||||||||||||||||||||| |||||||||    
T  3363003 catacccgcatccattacccgcactttaactatgaaaa 3363040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 476
Target Start/End: Complemental strand, 24430357 - 24430264
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaattcatataatagta 476  Q
    ||||||||| ||| ||||  ||||||||||||||  ||||||||||||||||||  ||||| ||||| | |||||| ||| | ||| |||||||    
T  24430357 tacccgcaccttaactattgaaagataataaaaataatcacaattgaaataaaaatatgattcaaaagttttcaaaacaacttataaaatagta 24430264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 481
Target Start/End: Original strand, 21153261 - 21153357
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||||||||||||| | || |||||| ||||||||| | |||||||||||||||||  ||| ||||||   |||||||||| || || ||||||| ||||    
T  21153261 tacccgcactttaaccataaaaagacaataaaaaacaccacaattgaaataaaac--tgaaccaaaaaatttcaaatcaactcgtaaaatagtatgaat 21153357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 407
Target Start/End: Complemental strand, 24395567 - 24395504
Alignment:
Q  344 ataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaaga 407  Q
    ||||||||||||||| ||||||  |||||| |||||||||| | ||||||||  ||||||||||    
T  24395567 ataccctatgggcacataagtgtccatacctgcatccattagcggcactttaattatgaaaaga 24395504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 436
Target Start/End: Original strand, 43218675 - 43218721
Alignment:
Q  389 cactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  43218675 cactttaactatgaaaagacaataaaa-atatcacaattgaaataaaa 43218721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 393
Target Start/End: Complemental strand, 48644600 - 48644542
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactt 393  Q
    |||||||  ||||||| |||||| ||||||||||||||| | | |||||||||||||||    
T  48644600 cccttccctataccctgtgggcatctaagtgctcatacctgtacccattacccgcactt 48644542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 464
Target Start/End: Complemental strand, 31331000 - 31330919
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaatt 464  Q
    ||||| ||||||| ||| ||||||| ||   |||| ||||||| ||||||||||| |||||||||||  |||||||| ||||    
T  31331000 tacccacactttaactacgaaaagacaacggaaaacatcacaactgaaataaaactatgatccaaaaaaattcaaataaatt 31330919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 447
Target Start/End: Original strand, 16278487 - 16278554
Alignment:
Q  379 ccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaa 447  Q
    ||||||||| |||||||  ||| |||||| ||||||||  ||||||||||| ||||||| |||||||||    
T  16278487 ccattacccacactttaattataaaaagacaataaaaac-atcacaattgatataaaactatgatccaa 16278554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 419
Target Start/End: Original strand, 20443404 - 20443488
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaata 419  Q
    ||||||| ||||||| ||||| | |||||||| | |||||| | ||||||||||||||||  | |  ||||||||||||| ||||    
T  20443404 cccttccccatacccgatgggtatctaagtgcccgtacccgaacccattacccgcactttcacaacaaaaagataataaataata 20443488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 23352005 - 23352053
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaa 431  Q
    |||| |||||||| || |||||||| ||||||| |||||||||||||||    
T  23352005 tacctgcactttaactctgaaaagagaataaaatatatcacaattgaaa 23352053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 2e-44; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 34718883 - 34718756
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  34718883 cccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataa 34718784  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||||||| |||||||    
T  34718783 aactatgatccaaaattatttaaatcaa 34718756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 41692567 - 41692440
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  41692567 cccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataa 41692468  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||||||| |||||||    
T  41692467 aactatgatccaaaattatttaaatcaa 41692440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 335 - 481
Target Start/End: Complemental strand, 19254587 - 19254441
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||| |||| ||||||| |||||||||| |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  19254587 cccttccccataccctatgagcacttaagtgcccatacccgcacccattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataa 19254488  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||| |||||||||||||||| ||||||| | ||| ||||||| ||||    
T  19254487 aactatgatccaaaattatttaaatcaactaataaaatagtatgaat 19254441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 332 - 481
Target Start/End: Original strand, 38309781 - 38309930
Alignment:
Q  332 gtacccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaa 431  Q
    |||||||| | |||||||||||||||| ||||||||||||||||||  ||||| ||||||||| |||||||||||| || |||||| |||||||||||||    
T  38309781 gtaccctttcccataccctatgggcacttaagtgctcatacccgcacacattatccgcactttctctatgaaaagacaacaaaaaacatcacaattgaaa 38309880  T
Q  432 taaaaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    |||||| ||||||| |||||||| ||||||| | ||| ||||||| ||||    
T  38309881 taaaactatgatccgaaattatttaaatcaactaataaaatagtacgaat 38309930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 337 - 461
Target Start/End: Complemental strand, 6277912 - 6277786
Alignment:
Q  337 cttcctcataccctatgggcacctaagtgctcataccc--gcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||| |||||||||||||||| ||||||| |||||||  ||| |||||||||||||||| |||||||||||| |||| |||| || |||||||||||||    
T  6277912 cttccccataccctatgggcacttaagtgcccatacccccgcacccattacccgcactttctctatgaaaagacaatataaaacattacaattgaaataa 6277813  T
Q  435 aaccatgatccaaaattattcaaatca 461  Q
    ||| |||||||||||||||| ||||||    
T  6277812 aactatgatccaaaattatttaaatca 6277786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 336 - 462
Target Start/End: Original strand, 35853531 - 35853657
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaa 435  Q
    |||||| |||||||||||||||| ||||||| |||||||||| ||||||||||||||||| | ||||||||||||||||||  | |||| ||||||||||    
T  35853531 ccttccccataccctatgggcacttaagtgcccatacccgcacccattacccgcactttagccatgaaaagataataaaaatcaccacacttgaaataaa 35853630  T
Q  436 accatgatccaaaattattcaaatcaa 462  Q
    || |||||||||| || || |||||||    
T  35853631 actatgatccaaattttttaaaatcaa 35853657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 335 - 481
Target Start/End: Complemental strand, 4902040 - 4901896
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaa-tatcacaattgaaata 433  Q
    ||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||   || ||||||||||| |||||||||  |||||||||||||||    
T  4902040 cccttccccataccctatgggcacctaagtgcccatacccgcacccattacccgca---taactatgaaaagacaataaaaaagcatcacaattgaaata 4901944  T
Q  434 aaaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    |||  |||||||||||   |||||||||| ||||| ||||||| ||||    
T  4901943 aaaatatgatccaaaaaatttcaaatcaactcataaaatagtatgaat 4901896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 332 - 481
Target Start/End: Complemental strand, 24489175 - 24489027
Alignment:
Q  332 gtacccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaa 431  Q
    ||||| |||||||||||||||| |||||| | |||  ||||||||| ||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||    
T  24489175 gtacctttcctcataccctatgcgcaccttaatgcctatacccgcacccattacccacactttaactatgaaaagacaat-aaaaatatcacaattgaaa 24489077  T
Q  432 taaaaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    |||||| ||| | ||||| | |||||||||| ||||| ||||||| ||||    
T  24489076 taaaactatggttcaaaaattttcaaatcaactcataaaatagtatgaat 24489027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 338 - 476
Target Start/End: Complemental strand, 639458 - 639320
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||| ||||||||||||| || ||||||| |||||||||||| ||||||||||| ||| | ||||||||| ||||||||| | ||||||||||||||||     
T  639458 ttccccataccctatgggtacttaagtgcccatacccgcatcaattacccgcacattaaccatgaaaagaaaataaaaaacaccacaattgaaataaaat 639359  T
Q  438 catgatccaaaattattcaaatcaattcatataatagta 476  Q
     |||||||||||   |||||||||| | ||| |||||||    
T  639358 tatgatccaaaaaatttcaaatcaactaataaaatagta 639320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 336 - 462
Target Start/End: Original strand, 32302398 - 32302524
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaa 435  Q
    |||||| |||||| ||||||||| ||||||| |||||||||| ||||||||||||||||| | ||| ||||||||||||||  | |||| ||||||||||    
T  32302398 ccttccccataccttatgggcacttaagtgcccatacccgcacccattacccgcactttagccatggaaagataataaaaatcaccacacttgaaataaa 32302497  T
Q  436 accatgatccaaaattattcaaatcaa 462  Q
    || |||||||||| || || |||||||    
T  32302498 actatgatccaaatttttttaaatcaa 32302524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 335 - 436
Target Start/End: Original strand, 7978039 - 7978139
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| | ||||||||||||||||||| ||||||||||||||||| ||||||||| | ||| ||||| ||||||||||||||||    
T  7978039 cccttccccataccctatgggtatctaagtgctcatacccgcacccattacccgcactttaactatgaaaaaacaat-aaaaacatcacaattgaaataa 7978137  T
Q  435 aa 436  Q
    ||    
T  7978138 aa 7978139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 336 - 481
Target Start/End: Original strand, 19549359 - 19549505
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattg-aaataa 434  Q
    |||||| ||||||| ||||| |||||||| | ||||||| || ||||||||||||||||| ||||||||||| ||||||| |||| ||||||| ||||||    
T  19549359 ccttccccataccccatgggtacctaagtacccatacccacacccattacccgcactttaactatgaaaagacaataaaatatattacaattgaaaataa 19549458  T
Q  435 aaccatgatc-caaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||| ||| || ||||||| |||||||||| ||||| ||||||| ||||    
T  19549459 aactatggtctcaaaatt-ttcaaatcaactcataaaatagtacgaat 19549505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 29455799 - 29455900
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||| |||||| | |||||||| |||||||||| ||||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||    
T  29455799 cccttccccataccttatgggtatctaagtgcccatacccgcacccattacccacactttaactatgaaaagataat-aaaaacatcacaattgaaataa 29455897  T
Q  435 aac 437  Q
    |||    
T  29455898 aac 29455900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 437
Target Start/End: Original strand, 41983270 - 41983357
Alignment:
Q  349 ctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||||    
T  41983270 ctatgggtacctaagtgctcatacctgcacccattacccgcactttaactatgaaaagacaat-aaaaacatcacaattgaaataaaac 41983357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 468
Target Start/End: Original strand, 4572277 - 4572408
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||| |||||| | |||||||||||||| ||||||||||| |||||||||| ||||||||||| || |||||| ||||||| ||||||||    
T  4572277 cccttccccatacc-tatgggtatctaagtgctcatactcgcatccattatccgcactttaactatgaaaagacaa-aaaaaacatcacaaatgaaataa 4572374  T
Q  435 aaccatgatccaaaattattcaaatcaattcata 468  Q
    ||| | ||||| ||||| || |||| || |||||    
T  4572375 aactacgatcccaaatttttaaaattaactcata 4572408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 1060956 - 1061058
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||| |||||||| |||||| ||| |||||||||| ||||||| ||||||||| ||||||||| | || |||||| ||||||| ||||||||    
T  1060956 cccttccccatatcctatgggtacctaattgcccatacccgcacccattacacgcactttaactatgaaaaaacaaaaaaaaacatcacaaatgaaataa 1061055  T
Q  435 aac 437  Q
    |||    
T  1061056 aac 1061058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 473
Target Start/End: Original strand, 14088277 - 14088413
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||  |||||||||| |||||||| | ||||||||||||||||| ||||||||| | || |||||| ||||||| ||||||||    
T  14088277 cccttccccataccctatggt-acctaagtgcccatacccgtacccattacccgcactttaactatgaaaaaacaa-aaaaaacatcacaaatgaaataa 14088374  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataata 473  Q
    ||| | ||||| || || || |||| |||||||| ||||    
T  14088375 aactacgatcccaattttttaaaattaattcataaaata 14088413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 22632341 - 22632244
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    |||| |||||| |||||| ||||||||| ||||||| |||  |||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||    
T  22632341 ttccccataccttatgggtacctaagtgatcatacctgcactcattacccgcactttaactatgaaaagacaat-aaaaacatcacaattgaaataaaa 22632244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 336 - 437
Target Start/End: Complemental strand, 31149794 - 31149693
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgc-tcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    |||||| ||||||||||||| | |||||||| | ||||||||| |||||| |||||||||| ||||||||||| ||| ||||| ||||||||||||||||    
T  31149794 ccttccccataccctatgggtatctaagtgccttatacccgcacccattatccgcactttaactatgaaaagacaat-aaaaacatcacaattgaaataa 31149696  T
Q  435 aac 437  Q
    |||    
T  31149695 aac 31149693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 385 - 481
Target Start/End: Complemental strand, 25694725 - 25694629
Alignment:
Q  385 cccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    |||||||||| |||||||||||| ||||||||| ||||||||||||||||||   ||||| ||||||||| ||||||| | ||| ||||||| ||||    
T  25694725 cccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataaaattgtgatctaaaattatttaaatcaactaataaaatagtacgaat 25694629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 335 - 447
Target Start/End: Original strand, 30774815 - 30774927
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||| ||||| |||||||  ||||||||| ||| ||||||||||||| | ||| ||| ||||||||||  | |||| |||||||||    
T  30774815 cccttccccataccctataggcacttaagtgcctatacccgcacccactacccgcactttagccatggaaaaataataaaaatcaccacacttgaaataa 30774914  T
Q  435 aaccatgatccaa 447  Q
    ||| |||||||||    
T  30774915 aactatgatccaa 30774927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 335 - 447
Target Start/End: Complemental strand, 36470550 - 36470439
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||| ||||||| |||||||||  |||||||||| |||||||| |||||||| |||||||||   ||||||||  ||||||||||||||||    
T  36470550 cccttccccatactctatgggtacctaagtgtccatacccgcacccattaccagcactttagctatgaaaaaggaataaaaac-atcacaattgaaataa 36470452  T
Q  435 aaccatgatccaa 447  Q
    ||| ||| |||||    
T  36470451 aactatggtccaa 36470439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 485
Target Start/End: Complemental strand, 15674071 - 15673928
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaa-tatcacaattgaaataaaaccatg 441  Q
    |||||||||||||||||||||||  |||||||||| |||||| ||||| |||| || |||||||| |||||||||  | ||||| ||||||| ||  |||    
T  15674071 cataccctatgggcacctaagtgtccatacccgcacccattatccgcaatttaactctgaaaagacaataaaaaagcaccacaactgaaatacaattatg 15673972  T
Q  442 atccaaaattattcaaatcaattcatataatagtaggaatagta 485  Q
    ||||| ||   |||||||||| ||||| ||| ||| ||||||||    
T  15673971 atccagaaaatttcaaatcaactcataaaatggtatgaatagta 15673928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 449
Target Start/End: Complemental strand, 16620398 - 16620299
Alignment:
Q  350 tatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaa 449  Q
    ||||| |||||||||||||||||  | | |||||| || ||||||| | ||||||||| ||||||||  ||||||||||||||||||| |||||||||||    
T  16620398 tatggacacctaagtgctcatacttgtacccattatccacactttagcaatgaaaagacaataaaaagcatcacaattgaaataaaactatgatccaaaa 16620299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 485
Target Start/End: Complemental strand, 33347175 - 33347024
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaa-tatcacaattgaaata 433  Q
    ||||||| |||||||||||||||||||||||  |||||||||| |||||| | ||| |||| || |||||||| |||||||||  | ||||| |||||||    
T  33347175 cccttccccataccctatgggcacctaagtgtccatacccgcacccattatctgcaatttaactctgaaaagacaataaaaaagcaccacaactgaaata 33347076  T
Q  434 aaaccatgatccaaaattattcaaatcaattcatataatagtaggaatagta 485  Q
     ||  |||||||| ||   |||||||||| ||||| ||| ||| ||||||||    
T  33347075 caattatgatccagaaaatttcaaatcaactcataaaatggtatgaatagta 33347024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 436
Target Start/End: Original strand, 14087675 - 14087771
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    |||| ||||||||||||| | |||||||| |||||||||| |||||| |||||||||| ||||||||| | ||| ||||| ||||||||||||||||||    
T  14087675 ttccccataccctatgggtatctaagtgcccatacccgca-ccattatccgcactttaactatgaaaaaacaat-aaaaacatcacaattgaaataaaa 14087771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 437
Target Start/End: Original strand, 14645331 - 14645425
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||||||||| || ||||||  |||||||||| ||||||||||||||||| ||||| ||| | || |||||| ||||||| |||||||||||    
T  14645331 cataccctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatggaaaaacaaaaaaaaacatcacaaatgaaataaaac 14645425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 350 - 476
Target Start/End: Original strand, 16186791 - 16186917
Alignment:
Q  350 tatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaa 449  Q
    |||||| || ||||||| ||||| |||| ||||||||||||||||| |  |||||||| ||||||||| | || |||||||||||||  |||||||||||    
T  16186791 tatgggtacttaagtgcccatacacgcacccattacccgcactttaaccgtgaaaagacaataaaaaacaccataattgaaataaaattatgatccaaaa 16186890  T
Q  450 ttattcaaatcaattcatataatagta 476  Q
       |||||||||| | ||| |||||||    
T  16186891 aatttcaaatcaactaataaaatagta 16186917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 468
Target Start/End: Original strand, 35935322 - 35935448
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaa-tatcacaattgaaataaaaccatg 441  Q
    ||||||||| |||||||||||||| |||||||||| ||||||||| || |||| || |||||||| |||||||||  | ||||| ||||||| ||| |||    
T  35935322 cataccctacgggcacctaagtgcccatacccgcacccattacccacagtttaactctgaaaagacaataaaaaagcaccacaactgaaatacaactatg 35935421  T
Q  442 atccaaaattattcaaatcaattcata 468  Q
    ||||| ||   |||||||||| |||||    
T  35935422 atccagaaaatttcaaatcaactcata 35935448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 339 - 481
Target Start/End: Original strand, 6310992 - 6311136
Alignment:
Q  339 tcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataat--aaaaaatatcacaattgaaataaaa 436  Q
    |||||||||||||||| || |||||||| |||| |||||   |||||  |||||||| ||||||||||| |||  |||||| ||||||||||||||||||    
T  6310992 tcctcataccctatggacatctaagtgcccatatccgcacttattacatgcactttaactatgaaaagacaataaaaaaaacatcacaattgaaataaaa 6311091  T
Q  437 ccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
      |||||| ||  || || ||||||| ||||| ||||||| ||||    
T  6311092 atatgatctaattttttttaaatcaactcataaaatagtacgaat 6311136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 343 - 437
Target Start/End: Original strand, 41616600 - 41616695
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaa--gataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||||||||| || ||||||| |||||||||| ||||||||||||||||| |||||||||   |||| |||||| ||||||| |||||||||||    
T  41616600 cataccctatgggtacttaagtgcccatacccgcacccattacccgcactttaactatgaaaaacaataa-aaaaaacatcacaaatgaaataaaac 41616695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 436
Target Start/End: Original strand, 18595370 - 18595469
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaa 435  Q
    ||||||||||| ||||| || | ||||||||  ||||||||| |||||| |||||||||| |||| |||| | ||| |||||||||||||||||||||||    
T  18595370 ccttcctcatatcctataggtatctaagtgcctatacccgcacccattatccgcactttaactataaaaaaacaat-aaaaatatcacaattgaaataaa 18595468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 448
Target Start/End: Complemental strand, 3049820 - 3049755
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaa 448  Q
    |||| |||||||| | ||||||||||||||||||| | ||||||||||||||||| ||||| ||||    
T  3049820 tacctgcactttagccatgaaaagataataaaaaacaccacaattgaaataaaactatgattcaaa 3049755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 436
Target Start/End: Complemental strand, 23141710 - 23141623
Alignment:
Q  348 cctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    ||||||||||||| | ||   ||||| ||| | |||||||||| |||| ||||||||||| |||||||| |||||||||||||||||||    
T  23141710 cctatgggcaccttactgtctataccggcacctattacccgcattttaactatgaaaagacaataaaaa-tatcacaattgaaataaaa 23141623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 42030917 - 42030984
Alignment:
Q  379 ccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatcca 446  Q
    |||||| ||||||| ||  ||| |||||| |||||||||||| |||||||||||||||| ||||||||    
T  42030917 ccattatccgcactgtaattataaaaagacaataaaaaatattacaattgaaataaaactatgatcca 42030984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 6224897 - 6224844
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||||    
T  6224897 tacccgcactttaactatgaaaagacaat-aaaaacatcacaattgaaataaaac 6224844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 477
Target Start/End: Complemental strand, 5657777 - 5657677
Alignment:
Q  378 tccattacccgcactttatctatgaaaagataataaaaaat-atcacaattgaaataaaaccatgatccaaaattattcaaatcaattcatataatagta 476  Q
    ||||||| ||||||||||  ||| |||||| |||||||||  ||||| ||||||||||||| |||||||||  || || ||| ||| ||||| |||||||    
T  5657777 tccattatccgcactttaattataaaaagacaataaaaaaacatcactattgaaataaaactatgatccaattttttttaaagcaactcataaaatagta 5657678  T
Q  477 g 477  Q
    |    
T  5657677 g 5657677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 10937429 - 10937469
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccg 375  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  10937429 cccttccccataccctatgggcacctaagtgcccatacccg 10937469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 15719281 - 15719239
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgca 377  Q
    ||||||||||||||||||||| || ||||||| ||||||||||    
T  15719281 cccttcctcataccctatgggtacttaagtgcccatacccgca 15719239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 52802358 - 52802231
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  52802358 cccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataa 52802259  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||||||| |||||||    
T  52802258 aactatgatccaaaattatttaaatcaa 52802231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 53140628 - 53140755
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  53140628 cccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataa 53140727  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||||||| |||||||    
T  53140728 aactatgatccaaaattatttaaatcaa 53140755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 335 - 481
Target Start/End: Complemental strand, 29405966 - 29405820
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||| |||||||||||||||||| |||||| ||| |||||| ||||||||| |||||||||||| || |||||||||||||||||||||||    
T  29405966 cccttccccatactctatgggcacctaagtgcccatacctgcacccattatccgcactttctctatgaaaagacaaaaaaaaatatcacaattgaaataa 29405867  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||| |||||||||||||||| ||||||| | ||| ||||||| ||||    
T  29405866 aactatgatccaaaattatttaaatcaactaataaaatagtacgaat 29405820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 22247877 - 22248005
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataat-aaaaaatatcacaattgaaata 433  Q
    ||||||| |||||||||| ||||| |||||||||||||||||| |||||| ||||||||| |||||||||||| ||| |||||| |||||||||||||||    
T  22247877 cccttccccataccctataggcacttaagtgctcatacccgcacccattatccgcactttctctatgaaaagacaataaaaaaacatcacaattgaaata 22247976  T
Q  434 aaaccatgatccaaaattattcaaatcaa 462  Q
    |||| |||||||||||||||| |||||||    
T  22247977 aaactatgatccaaaattatttaaatcaa 22248005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 343 - 481
Target Start/End: Original strand, 45097587 - 45097726
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataat-aaaaaatatcacaattgaaataaaaccatg 441  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||| |||||||||||| ||| |||||| ||||||||| ||||||||| |||    
T  45097587 cataccctatgggcacctaagtgcctatacccgcacccattacccgcactttctctatgaaaagacaataaaaaaacatcacaattaaaataaaactatg 45097686  T
Q  442 atccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||||||||||||| ||||||| | ||| ||||||| ||||    
T  45097687 atccaaaattatttaaatcaactaataaaatagtacgaat 45097726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 335 - 473
Target Start/End: Original strand, 22829755 - 22829893
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||||||||||| |||||||||| |||||||||||| |||| ||||||||| | |||||||||   ||||||||||||||    
T  22829755 cccttccccataccctatgggcacctaagtgcccatacccgcacccattacccgcattttaactatgaaaaaacaataaaaaaacccacaattgaaataa 22829854  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataata 473  Q
    ||| |||||||||||   |||||||||| ||||| ||||    
T  22829855 aactatgatccaaaaaatttcaaatcaactcataaaata 22829893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 336 - 462
Target Start/End: Original strand, 33733395 - 33733520
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaa 435  Q
    |||||| |||||||||||||||| ||||||| |||||| ||| |||||||||||||||| |||||||||||| ||||||||| |||||||||| ||||||    
T  33733395 ccttccccataccctatgggcacttaagtgcccatacctgcacccattacccgcactttctctatgaaaagacaataaaaaacatcacaattg-aataaa 33733493  T
Q  436 accatgatccaaaattattcaaatcaa 462  Q
    || |||| ||||||||||| |||||||    
T  33733494 actatgacccaaaattatttaaatcaa 33733520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 8806019 - 8805892
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    |||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||||||| | ||| ||||||||||||||  | |||| |||||||||    
T  8806019 cccttcctcataacctatgggcacttaagtgcccatacccgcacccattacccgcactttagccatggaaagataataaaaatcaccacacttgaaataa 8805920  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||| || || |||||||    
T  8805919 aactatgatccaaatttttttaaatcaa 8805892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 39804287 - 39804414
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || ||||| | |||||||||| ||||||||||||||||| ||||| ||||||||||||||  | |||| |||||||||    
T  39804287 cccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttagctatggaaagataataaaaatcaccacacttgaaataa 39804386  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||| || || |||||||    
T  39804387 aactatgatccaaatttttttaaatcaa 39804414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 343 - 481
Target Start/End: Original strand, 46080743 - 46080882
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataat-aaaaaatatcacaattgaaataaaaccatg 441  Q
    ||||||||||| |||| ||||||  ||||||||||  |||||||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||| |||    
T  46080743 cataccctatgagcacttaagtgtccatacccgcactcattacccacactttctctatgaaaagacaataaaaaaacatcacaattgaaataaaactatg 46080842  T
Q  442 atccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||  ||||||||| ||||||||| ||| ||||||| ||||    
T  46080843 atataaaattatttaaatcaattgataaaatagtacgaat 46080882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 343 - 444
Target Start/End: Original strand, 14595325 - 14595426
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatga 442  Q
    |||||| ||||| |||||||||||||||||||| |||||||||||||||||||  ||| ||| || ||||||||||||||| ||||||||||||| ||||    
T  14595325 cataccttatggacacctaagtgctcatacccgtatccattacccgcactttaattataaaacgacaataaaaaatatcaccattgaaataaaactatga 14595424  T
Q  443 tc 444  Q
    ||    
T  14595425 tc 14595426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 336 - 448
Target Start/End: Complemental strand, 56445255 - 56445142
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataa-aaaatatcacaattgaaataa 434  Q
    |||||| |||||| ||||||||| ||||||| ||||| |||| ||||||||||||||||| | ||||||||||||||| |||| | ||||||||||||||    
T  56445255 ccttccccataccttatgggcacttaagtgcccatactcgcacccattacccgcactttagccatgaaaagataataaaaaaacaccacaattgaaataa 56445156  T
Q  435 aaccatgatccaaa 448  Q
    ||| ||||||||||    
T  56445155 aactatgatccaaa 56445142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 26340324 - 26340197
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||| ||||||||||| ||||| | |||||||||| ||||||||||||||||| | ||| |||||||||||||| || || | |||||||||    
T  26340324 cccttccccatatcctatgggcacttaagtacccatacccgcacccattacccgcactttagccatggaaagataataaaaattaccagacttgaaataa 26340225  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||| || || |||||||    
T  26340224 aactatgatccaaatttttttaaatcaa 26340197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 343 - 437
Target Start/End: Complemental strand, 2225042 - 2224949
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||| | || |||||||||||||| |||||||||||    
T  2225042 catacccgatgggtacctaagtgctcatacccgcacccattacccgcactttaactatgaaaaaacaa-aaaaaatatcacaaatgaaataaaac 2224949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 22306896 - 22306767
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaata--tcacaattgaaat 432  Q
    |||||||||||||| ||||||||| || |||| |||||||||| | |||||||||| |||| ||||||||||||||||||||| |   ||||||||||||    
T  22306896 cccttcctcataccttatgggcacttaggtgcccatacccgcaccaattacccgcattttaactatgaaaagataataaaaaaaaacccacaattgaaat 22306797  T
Q  433 aaaaccatgatccaaaattattcaaatcaa 462  Q
    ||||  |||||||||||   ||||||||||    
T  22306796 aaaattatgatccaaaaaatttcaaatcaa 22306767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 21075847 - 21075945
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||    || ||||||||||||||  |||||||    
T  21075847 cccttccccataccctatgggtacctaagtgcccatacccgcatccattacccgcactttaactatgaaa----aaaaaaaaatatcacaaaagaaataa 21075942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 337 - 437
Target Start/End: Complemental strand, 3387307 - 3387208
Alignment:
Q  337 cttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    ||||| ||||||||||||| || ||||||| |||||||||| ||||||||||||||||| ||||||||||| || |||||| ||||||| ||||||||||    
T  3387307 cttccccataccctatgggtacttaagtgcccatacccgcacccattacccgcactttaactatgaaaagacaa-aaaaaacatcacaaatgaaataaaa 3387209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 343 - 462
Target Start/End: Original strand, 31786439 - 31786561
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataa---taaaaaatatcacaattgaaataaaacca 439  Q
    |||||||||||||||||||||||   ||||||||| |||||||||||| |||| ||||||||||||||   |||||||   ||||||||||||||||| |    
T  31786439 cataccctatgggcacctaagtgtctatacccgcacccattacccgcattttaactatgaaaagataataataaaaaaacccacaattgaaataaaacta 31786538  T
Q  440 tgatccaaaattattcaaatcaa 462  Q
    ||||||||||   ||||||||||    
T  31786539 tgatccaaaaaatttcaaatcaa 31786561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 2721326 - 2721230
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||||||||| |||||||||      |||||||||||||| ||||||||    
T  2721326 cccttccccataccctatgggtacctcagtgcccatacccgcatccattacccgcactttaactatgaaaa------aaaaaatatcacaaatgaaataa 2721233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 12187788 - 12187884
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||||||||| |||||||||      |||||||||||||| ||||||||    
T  12187788 cccttccccataccctatgggtacctcagtgcccatacccgcatccattacccgcactttaactatgaaaa------aaaaaatatcacaaatgaaataa 12187881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 343 - 473
Target Start/End: Complemental strand, 31713720 - 31713589
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaata-tcacaattgaaataaaaccatg 441  Q
    ||||| |||||||||||||||||  |||||||||| | |||||||||| ||||  |||||||||| ||||||||| |  ||||||||||||||||| |||    
T  31713720 catactctatgggcacctaagtgtccatacccgcacctattacccgcattttaattatgaaaagacaataaaaaaaacccacaattgaaataaaactatg 31713621  T
Q  442 atccaaaattattcaaatcaattcatataata 473  Q
    ||||||||   |||||||||| ||||| ||||    
T  31713620 atccaaaaaatttcaaatcaactcataaaata 31713589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 343 - 477
Target Start/End: Complemental strand, 51807016 - 51806882
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatga 442  Q
    ||||||||||||  |||||||||| |||||| | | |||||||||||||||||  ||| |||||| ||||||||| ||||| ||||||||||||| ||||    
T  51807016 cataccctatggtaacctaagtgcccatacctgtacccattacccgcactttaattataaaaagacaataaaaaacatcaccattgaaataaaactatga 51806917  T
Q  443 tccaaaattattcaaatcaattcatataatagtag 477  Q
    |||||  || || ||| ||| ||||| ||||||||    
T  51806916 tccaatttttttaaaagcaactcataaaatagtag 51806882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 437
Target Start/End: Complemental strand, 1731147 - 1731043
Alignment:
Q  332 gtacccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaa 431  Q
    |||||||||| ||||| ||||||| |||||||||| |||||| |||||||||  ||||||||||  |||||||||| ||||||||  |||||||||||||    
T  1731147 gtacccttccccatactctatgggtacctaagtgcccatacctgcatccattgtccgcactttaattatgaaaagacaataaaaac-atcacaattgaaa 1731049  T
Q  432 taaaac 437  Q
    ||||||    
T  1731048 taaaac 1731043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 41003337 - 41003441
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatg--aaaagataataaaaaatatcacaattgaaat 432  Q
    ||||||| |||| |||||||| ||||||||||||||||||||| ||||||||||||||||| |||||  |||| | || |||||| ||||||| ||||||    
T  41003337 cccttccccatatcctatgggtacctaagtgctcatacccgcacccattacccgcactttaactatgaaaaaacaaaaaaaaaaacatcacaaatgaaat 41003436  T
Q  433 aaaac 437  Q
    |||||    
T  41003437 aaaac 41003441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 447
Target Start/End: Complemental strand, 1758073 - 1757962
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| |||||||||| |||||||||| |||||||||||||||||  ||||||||   ||| ||||| || |||||||||||||    
T  1758073 cccttccccataccctatgggtacctaagtgcccatacccgcacccattacccgcactttagttatgaaaaaggaat-aaaaacattacaattgaaataa 1757975  T
Q  435 aaccatgatccaa 447  Q
    ||| |||| ||||    
T  1757974 aactatgacccaa 1757962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 28234265 - 28234139
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    |||||||  ||||||||||||||| || |||| |||||||||| ||||||||||||||||| | ||| ||||||||||||||  | ||||  ||||||||    
T  28234265 cccttcccaataccctatgggcactta-gtgcccatacccgcacccattacccgcactttagccatggaaagataataaaaatcaccacacctgaaataa 28234167  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||| || || |||||||    
T  28234166 aactatgatccaaatttttttaaatcaa 28234139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 34459721 - 34459623
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||||||||||||||||| | |||||||| |||||  |||  |||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||||    
T  34459721 ttcctcataccctatgggtatctaagtgcacatacttgcactcattacccgcactttaactatgaaaagacaat-aaaaacatcacaattgaaataaaac 34459623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 417
Target Start/End: Original strand, 11034713 - 11034795
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaa 417  Q
    ||||||| |||||||||||||||||||||||| |||||||||| |||||| ||||| |||| || |||||||| |||||||||    
T  11034713 cccttccccataccctatgggcacctaagtgcccatacccgcacccattatccgcagtttaactctgaaaagacaataaaaaa 11034795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 405
Target Start/End: Original strand, 12185796 - 12185866
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaa 405  Q
    ||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||||||||| |||||||||    
T  12185796 cccttccccataccctatgggtacctcagtgcccatacccgcatccattacccgcactttaactatgaaaa 12185866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 42755358 - 42755459
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||  |||||||||| |||||||||| ||||||||||||||||| ||||||||| | || |||||| ||||||| | ||||||    
T  42755358 cccttccccataccctatggatacctaagtgcacatacccgcacccattacccgcactttaactatgaaaaaacaa-aaaaaacatcacaaatcaaataa 42755456  T
Q  435 aac 437  Q
    |||    
T  42755457 aac 42755459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 336 - 475
Target Start/End: Complemental strand, 50982040 - 50981907
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattg-aaataa 434  Q
    |||||| ||||||||||||||||||||||       |||||| |||||||| |||||||| |||| |||||| ||| ||| |||||||||||| ||||||    
T  50982040 ccttccccataccctatgggcacctaagt-------cccgcacccattacctgcactttaactataaaaagacaatcaaatatatcacaattgaaaataa 50981948  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataatagt 475  Q
    ||| ||| ||| ||||| |||||||||| ||||| ||||||    
T  50981947 aactatggtcccaaatttttcaaatcaactcataaaatagt 50981907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 348 - 436
Target Start/End: Original strand, 33983167 - 33983254
Alignment:
Q  348 cctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||| ||||||||| |||||  |||| ||||||||||||||||||    
T  33983167 cctatgggtatctaagtgcccatacccgcacccattacccgcactttaactatgaaaaaataat-gaaaacatcacaattgaaataaaa 33983254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 358 - 481
Target Start/End: Original strand, 7262052 - 7262175
Alignment:
Q  358 cctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaa 457  Q
    ||||||||| |||||||||| |||||||||||| |||| || |||||||| ||||||||  | ||||| ||||||| ||| |||||||| ||   |||||    
T  7262052 cctaagtgcccatacccgcacccattacccgcagtttaactctgaaaagacaataaaaagcaccacaactgaaatacaactatgatccagaaaatttcaa 7262151  T
Q  458 atcaattcatataatagtaggaat 481  Q
    ||||| ||||| ||||||| ||||    
T  7262152 atcaactcataaaatagtatgaat 7262175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 14576809 - 14576905
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||| |||||||| |||| ||||| ||||||||||||||||| |||||||||| |||||||||      |||||||||||||| ||||||||    
T  14576809 cccttccccatatcctatgggtacctcagtgcccatacccgcatccattatccgcactttaactatgaaaa------aaaaaatatcacaaatgaaataa 14576902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 481
Target Start/End: Complemental strand, 23349462 - 23349341
Alignment:
Q  363 gtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcac---aattgaaataaaaccatgatccaaaattattcaaat 459  Q
    |||||| |||||||| |||||||||||| |||| |||||||| || ||||||||| | |||   |||||||||||||| ||||| ||||| | |||||||    
T  23349462 gtgctcttacccgcacccattacccgcattttaactatgaaatgacaataaaaaaaaccaccacaattgaaataaaactatgattcaaaaattttcaaat 23349363  T
Q  460 caattcatataatagtaggaat 481  Q
    ||| ||||| ||||||| ||||    
T  23349362 caactcataaaatagtatgaat 23349341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 29149109 - 29149008
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || ||||| | |||||||||| ||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  29149109 cccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttaactatggaaaaacaa-aaaaaacatcacaaatgaaataa 29149011  T
Q  435 aac 437  Q
    |||    
T  29149010 aac 29149008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 32655615 - 32655513
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || || || | |||||||||| ||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  32655615 cccttccccataccctatgggtacttaggtacccatacccgcacccattacccgcactttaactatggaaaaacaaaaaaaaacatcacaaatgaaataa 32655516  T
Q  435 aac 437  Q
    |||    
T  32655515 aac 32655513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 42053361 - 42053259
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||| |||| || ||||| | |||||||||| ||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  42053361 cccttccccataccctgtgggtacttaagtacccatacccgcacccattacccgcactttaactatggaaaaacaaaaaaaaacatcacaaatgaaataa 42053262  T
Q  435 aac 437  Q
    |||    
T  42053261 aac 42053259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 52180871 - 52180769
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || || || | |||||||||| ||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  52180871 cccttccccataccctatgggtacttaggtacccatacccgcacccattacccgcactttaactatggaaaaacaaaaaaaaacatcacaaatgaaataa 52180772  T
Q  435 aac 437  Q
    |||    
T  52180771 aac 52180769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 54979239 - 54979138
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || ||||| | |||||||||| ||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  54979239 cccttccccataccctatgggtacttaagtacacatacccgcacccattacccgcactttaactatggaaaaacaa-aaaaaacatcacaaatgaaataa 54979141  T
Q  435 aac 437  Q
    |||    
T  54979140 aac 54979138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 481
Target Start/End: Complemental strand, 8644291 - 8644179
Alignment:
Q  368 catacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaattcat 467  Q
    ||||||||||||||||| |  |||||||  |||||||||| |||||||| ||||||||||||| ||||| |||| | ||||| | |||||||||| ||||    
T  8644291 catacccgcatccattatctacactttaattatgaaaagacaataaaaa-tatcacaattgaactaaaatcatggttcaaaaattttcaaatcaactcat 8644193  T
Q  468 ataatagtaggaat 481  Q
    | ||||||| ||||    
T  8644192 aaaatagtacgaat 8644179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 9608993 - 9609077
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaatt 427  Q
    |||||| |||||| |||||||| || ||| ||||||||||||||| ||||||| ||||||||||  ||||||| |||||||||||    
T  9608993 cataccttatgggtacctaagttctaatatccgcatccattacccacactttaactatgaaaaggcaataaaatatatcacaatt 9609077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 342 - 437
Target Start/End: Original strand, 52595569 - 52595663
Alignment:
Q  342 tcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||||||||||||| || ||||||  |||||||||| ||||||||||||||||| ||||||||| | || |||||| ||||||| | |||||||||    
T  52595569 tcataccctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatgaaaaaacaa-aaaaaacatcacaagtaaaataaaac 52595663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 481
Target Start/End: Original strand, 8614603 - 8614708
Alignment:
Q  375 gcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaattcatataatag 474  Q
    |||||||||| |||||||||| ||||||||||| ||| ||||||||| |||||||| ||||| |||| | |||||   |||||||||| ||||| |||||    
T  8614603 gcatccattatccgcactttaactatgaaaagacaat-aaaaatatctcaattgaactaaaatcatggttcaaaaagtttcaaatcaactcataaaatag 8614701  T
Q  475 taggaat 481  Q
    || ||||    
T  8614702 tacgaat 8614708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 436
Target Start/End: Complemental strand, 22313447 - 22313348
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaa 435  Q
    |||||| |||| |||||||| | |||||||  ||||||||||  ||||| |||||||||| ||||||||| | ||||||||  |||||||||||||||||    
T  22313447 ccttccccatatcctatgggtatctaagtgtccatacccgcactcattatccgcactttaactatgaaaaaacaataaaaac-atcacaattgaaataaa 22313349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 437
Target Start/End: Original strand, 21245865 - 21245957
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||||||||| | |||||||| |||| |||||||||||| || ||||||| |||||||| || |  |||||| ||||||| |||||||||||    
T  21245865 cataccctatgggtatctaagtgcccatatccgcatccattatccacactttaactatgaaaggaca--aaaaaacatcacaaatgaaataaaac 21245957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 446
Target Start/End: Complemental strand, 21297331 - 21297268
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatcca 446  Q
    ||||||||||||| ||||||||||| ||||||||| |||| |||||||||||||  ||||||||    
T  21297331 tacccgcactttaactatgaaaagacaataaaaaacatcataattgaaataaaattatgatcca 21297268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 336 - 437
Target Start/End: Original strand, 38000610 - 38000714
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaa---gataataaaaaatatcacaattgaaat 432  Q
    |||||| |||||| |||||| |||||||||| ||||||||||||||||| | | |||||| |||||||||    | || |||||| ||||||| ||||||    
T  38000610 ccttccccataccttatgggtacctaagtgcccatacccgcatccattatctgaactttaactatgaaaaaacaaaaaaaaaaaacatcacaaatgaaat 38000709  T
Q  433 aaaac 437  Q
    |||||    
T  38000710 aaaac 38000714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 405
Target Start/End: Complemental strand, 3095047 - 3094990
Alignment:
Q  348 cctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaa 405  Q
    |||||| | |||||||||| |||||||||| ||||||||||||||||| |||||||||    
T  3095047 cctatgagtacctaagtgcccatacccgcacccattacccgcactttaactatgaaaa 3094990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 416
Target Start/End: Complemental strand, 27586669 - 27586596
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaa 416  Q
    ||||||||||||| |||||| ||| ||||||||||| || ||||| |||||||  |||||||||| ||||||||    
T  27586669 cataccctatgggtacctaaatgcccatacccgcattcaatacccacactttaattatgaaaagacaataaaaa 27586596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 447
Target Start/End: Original strand, 52013849 - 52013914
Alignment:
Q  382 ttacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaa 447  Q
    |||||||||||||| | || ||| |||||||||||| | ||||||||||||||||| |||||||||    
T  52013849 ttacccgcactttagccataaaatgataataaaaaacaccacaattgaaataaaactatgatccaa 52013914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 41780736 - 41780808
Alignment:
Q  409 aataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||||||||| | ||||||||||||||||| |||||||||||   |||||||||| ||||| ||||||| ||||    
T  41780736 aataaaaaacaccacaattgaaataaaacaatgatccaaaaaatttcaaatcaactcataaaatagtatgaat 41780808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 447
Target Start/End: Complemental strand, 39485209 - 39485115
Alignment:
Q  354 ggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaat-atcacaattgaaataaaaccatgatccaa 447  Q
    ||||||||||||| |||| ||| |  |||| |||||||||||  ||| |||||| |||||||||  ||||||||||||||||||| || ||||||    
T  39485209 ggcacctaagtgcccatatccgtaaacattgcccgcactttaattataaaaagacaataaaaaaacatcacaattgaaataaaactataatccaa 39485115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 436
Target Start/End: Original strand, 46030305 - 46030372
Alignment:
Q  368 catacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    |||||||||||| ||||||||||||||| |||||||||   ||| ||||  ||||||||||||||||||    
T  46030305 catacccgcatctattacccgcactttagctatgaaaaaggaat-aaaagcatcacaattgaaataaaa 46030372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 444
Target Start/End: Original strand, 9930458 - 9930564
Alignment:
Q  337 cttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    |||||||||||  ||||| ||||||||||  ||||||||    ||||| || |||||||  ||| |||||| ||||||||| ||||| ||||||||||||    
T  9930458 cttcctcatact-tatggacacctaagtgtccatacccgttcacattatcctcactttaattataaaaagacaataaaaaacatcaccattgaaataaaa 9930556  T
Q  437 ccatgatc 444  Q
    | ||||||    
T  9930557 ctatgatc 9930564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Original strand, 652270 - 652332
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaa 405  Q
    ||||||||||||| |||||||||| | ||||||||  |||||||| |||||||  ||||||||    
T  652270 cataccctatgggtacctaagtgcccttacccgcactcattacccacactttaattatgaaaa 652332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 437
Target Start/End: Original strand, 8066003 - 8066076
Alignment:
Q  363 gtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||| |||||||||||||||||| |  |||||| ||||||||| | || |||||| ||||||| |||||||||||    
T  8066003 gtgcccatacccgcatccattactctaactttaactatgaaaaaacaa-aaaaaacatcacaaatgaaataaaac 8066076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 443
Target Start/End: Original strand, 24486647 - 24486688
Alignment:
Q  402 aaaagataataaaaaatatcacaattgaaataaaaccatgat 443  Q
    |||||| ||||||||| ||||||||||||||||||| |||||    
T  24486647 aaaagacaataaaaaacatcacaattgaaataaaactatgat 24486688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 437
Target Start/End: Complemental strand, 28928670 - 28928615
Alignment:
Q  381 attacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||| |||||||||| ||||||||||| ||| ||||| || ||||||||||||||||    
T  28928670 attatccgcactttaactatgaaaagacaat-aaaaacattacaattgaaataaaac 28928615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 29994351 - 29994407
Alignment:
Q  349 ctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaa 405  Q
    ||||||| |||||| ||  | |||| ||||||||||||||||||||| |||||||||    
T  29994351 ctatgggtacctaaatgtccgtacctgcatccattacccgcactttaactatgaaaa 29994407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 2e-44; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 4893393 - 4893266
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  4893393 cccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataa 4893294  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||||||| |||||||    
T  4893293 aactatgatccaaaattatttaaatcaa 4893266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 29185094 - 29185221
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  29185094 cccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataa 29185193  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||||||| |||||||    
T  29185194 aactatgatccaaaattatttaaatcaa 29185221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 33362996 - 33362869
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||| ||||||||||||||||||  ||||||    
T  33362996 cccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaagacaataaaaaatatcacaatataaataa 33362897  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||||||| |||||||    
T  33362896 aactatgatccaaaattatttaaatcaa 33362869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 335 - 481
Target Start/End: Original strand, 20414975 - 20415121
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| | |||||||||||||| ||||||  |||||||||| |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  20414975 cccttccccgtaccctatgggcacttaagtggccatacccgcacccattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataa 20415074  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||| |||||||||||||||| ||||||| | ||| ||||||| ||||    
T  20415075 aactatgatccaaaattatttaaatcaactaataaaatagtacgaat 20415121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 418 - 485
Target Start/End: Original strand, 14106383 - 14106450
Alignment:
Q  418 tatcacaattgaaataaaaccatgatccaaaattattcaaatcaattcatataatagtaggaatagta 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14106383 tatcacaattgaaataaaaccatgatccaaaattattcaaatcaattcatataatagtaggaatagta 14106450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 335 - 473
Target Start/End: Complemental strand, 31646399 - 31646262
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||||||||||| |||||||||| || ||||||||| |||| ||||||||||| || ||||||   ||||||||||||||    
T  31646399 cccttccccataccctatgggcacctaagtgcccatacccgcacccgttacccgcattttaactatgaaaagacaacaaaaaa-cccacaattgaaataa 31646301  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataata 473  Q
    ||| |||||||||||   |||||||||| ||||| ||||    
T  31646300 aactatgatccaaaaaatttcaaatcaactcataaaata 31646262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 32835611 - 32835510
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  32835611 cccttcctcatactttatgggtacctaagtgctcatacccgcactcattacccgcactttaactatgaaaagacaat-aaaaatatcacaattgaaataa 32835513  T
Q  435 aac 437  Q
    |||    
T  32835512 aac 32835510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 337 - 474
Target Start/End: Original strand, 50099822 - 50099958
Alignment:
Q  337 cttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    ||||| || ||| ||||||||| ||||||| |||||||||| |||||||| |||||||| |  |||||||||||||||||| | ||||||||||||||||    
T  50099822 cttccccacaccttatgggcacttaagtgcccatacccgcacccattacctgcactttaaccgtgaaaagataataaaaaacaccacaattgaaataaaa 50099921  T
Q  437 ccatgatccaaaattattcaaatcaattcatataatag 474  Q
    | ||||| |||||  ||||||||||||||||| |||||    
T  50099922 ctatgat-caaaaaaattcaaatcaattcataaaatag 50099958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 336 - 475
Target Start/End: Original strand, 48985138 - 48985278
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataat-aaaaaatatcacaattgaaataa 434  Q
    ||||||||||||||||||||||| ||||||  |||||| ||| |||||||||||| |||| || |||||||| ||| |||||||||||||||||||||||    
T  48985138 ccttcctcataccctatgggcacttaagtgtccatacctgcacccattacccgcattttaactgtgaaaagacaataaaaaaatatcacaattgaaataa 48985237  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataatagt 475  Q
    ||| || ||||| ||   |||||||||| ||||| ||||||    
T  48985238 aactataatccataaaatttcaaatcaactcataaaatagt 48985278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 39026748 - 39026875
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||| |||||||||| ||||||||||||||||| | ||| ||||||||||||||  | ||||  ||||||||    
T  39026748 cccttccccataccctatgggcacttaagtgcccatacccgcacccattacccgcactttagccatggaaagataataaaaatcaccacacatgaaataa 39026847  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||| || || |||||||    
T  39026848 aactatgatccaaatttttttaaatcaa 39026875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 19506390 - 19506491
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| | |||||||| |||||||||| ||||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||    
T  19506390 cccttccccataccctatgggtatctaagtgcccatacccgcacccattacccacactttaactatgaaaagataat-aaaaacatcacaattgaaataa 19506488  T
Q  435 aac 437  Q
    |||    
T  19506489 aac 19506491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 47662282 - 47662384
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||||||||||||||| ||||||| |||||||||| ||||||||||||||||| | ||||||||||||||||||  | |||| |||||||||    
T  47662282 cccttccccataccctatgggcacttaagtgcccatacccgcacccattacccgcactttagccatgaaaagataataaaaatcaccacacttgaaataa 47662381  T
Q  435 aac 437  Q
    |||    
T  47662382 aac 47662384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 335 - 444
Target Start/End: Complemental strand, 19996776 - 19996668
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| | ||||||| ||||||||||| ||||||||||||||||  ||||||||||| ||| ||||| ||||||||||||||||    
T  19996776 cccttccccataccctatgggtatctaagtgttcatacccgcacccattacccgcactttgactatgaaaagacaat-aaaaacatcacaattgaaataa 19996678  T
Q  435 aaccatgatc 444  Q
    ||| ||||||    
T  19996677 aactatgatc 19996668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 337 - 436
Target Start/End: Original strand, 610719 - 610817
Alignment:
Q  337 cttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    ||||| ||||||||||||| || ||||||| |||||||||| ||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||    
T  610719 cttccccataccctatgggtacttaagtgcacatacccgcacccattacccgcactttaactatgaaaagacaat-aaaaacatcacaattgaaataaaa 610817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 29054706 - 29054604
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| |||||||||  |||||||||| ||||||||||||||||| ||||||||| ||||  ||||| ||||||| ||||||||    
T  29054706 cccttccccataccctatgggtacctaagtgtccatacccgcacccattacccgcactttaactatgaaaaaataaataaaaacatcacaaatgaaataa 29054607  T
Q  435 aac 437  Q
    |||    
T  29054606 aac 29054604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 481
Target Start/End: Complemental strand, 35949698 - 35949554
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaa-tatcacaattgaaataaaa 436  Q
    |||| |||||||| ||||||||||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||  | ||||| ||||||| ||    
T  35949698 ttccccataccctgtgggcacctaagtgcccatacccgcacccattacccgcagtttaactctgaaaagacaataaaaaagcaccacaactgaaatacaa 35949599  T
Q  437 ccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    | |||||||| ||   |||||||||| ||||| ||||||| ||||    
T  35949598 ctatgatccagaaaatttcaaatcaactcataaaatagtatgaat 35949554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 350 - 481
Target Start/End: Complemental strand, 29512298 - 29512168
Alignment:
Q  350 tatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaa 449  Q
    |||||| |||||||||| |||| | ||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||| ||| |||||      
T  29512298 tatgggtacctaagtgcacatatctgcatccattacccgcactttaactatgaaaagacaat-aaaaacatcacaattgaaataaaactatggtccaatt 29512200  T
Q  450 ttattcaaatcaattcatataatagtaggaat 481  Q
    || || |||| || ||||| ||||||| ||||    
T  29512199 tttttaaaattaactcataaaatagtatgaat 29512168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 35739112 - 35738985
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| || ||||||||||||| ||||||| |||| ||||| |||| |||||||||||| | ||| ||||||||||||||  | |||| |||||||||    
T  35739112 cccttccccagaccctatgggcacttaagtgcccatatccgcacccatcacccgcactttagccatggaaagataataaaaatcaccacacttgaaataa 35739013  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||| || || |||||||    
T  35739012 aactatgatccaaatttttttaaatcaa 35738985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 481
Target Start/End: Original strand, 48796544 - 48796691
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaa-tatcacaattgaaata 433  Q
    |||||||  ||||||| ||||||||||||||| |||||||||| |||||||||||| |||| || |||||||| |||||||||  | ||||| |||||||    
T  48796544 cccttccctataccctttgggcacctaagtgcccatacccgcacccattacccgcagtttaactctgaaaagacaataaaaaagcaccacaactgaaata 48796643  T
Q  434 aaaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
     ||| |||||||| ||   |||||||||| ||||| ||||||| ||||    
T  48796644 caactatgatccagaaaatttcaaatcaactcataaaatagtatgaat 48796691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 2978426 - 2978527
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| | |||||||| ||||||||||  |||||||| ||||||| ||||||||||| ||| ||||| ||||||||||||||||    
T  2978426 cccttccccataccctatgggtatctaagtgcccatacccgcacacattacccccactttaactatgaaaagacaat-aaaaacatcacaattgaaataa 2978524  T
Q  435 aac 437  Q
    |||    
T  2978525 aac 2978527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 25059108 - 25059209
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| | |||||||| |||||||||| ||||||||||||||||| |||||||||||  || ||||| || |||||||||||||    
T  25059108 cccttccccataccctatgggtatctaagtgcccatacccgcacccattacccgcactttaactatgaaaaga-cattaaaaacattacaattgaaataa 25059206  T
Q  435 aac 437  Q
    |||    
T  25059207 aac 25059209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 44328030 - 44327929
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| |||||||||  |||||||||| ||||||||||||||||| ||||||||| | || |||||| ||||||| ||||||||    
T  44328030 cccttccccataccctatgggtacctaagtgtccatacccgcacccattacccgcactttaactatgaaaaaacaa-aaaaaacatcacaaatgaaataa 44327932  T
Q  435 aac 437  Q
    |||    
T  44327931 aac 44327929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 473
Target Start/End: Complemental strand, 29426414 - 29426274
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaa--tatcacaattgaaat 432  Q
    ||||||| |||||| ||||||||||||||||| |||||||||| ||||||||| || |||| || ||||||||||||||||||   | |||| |||||||    
T  29426414 cccttccccataccatatgggcacctaagtgcccatacccgcacccattacccacagtttaactctgaaaagataataaaaaaagcaccacagttgaaat 29426315  T
Q  433 aaaaccatgatccaaaattattcaaatcaattcatataata 473  Q
    | ||| |||||||| ||   |||||||||| ||||| ||||    
T  29426314 acaactatgatccagaaaatttcaaatcaactcataaaata 29426274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 337 - 425
Target Start/End: Complemental strand, 3192253 - 3192165
Alignment:
Q  337 cttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaa 425  Q
    ||||| |||||| ||||||||||||||||  ||||||||||||||||| ||| |||| ||||||||||||| ||||||||| |||||||    
T  3192253 cttccacataccttatgggcacctaagtgtccatacccgcatccattatccgaacttaatctatgaaaagacaataaaaaacatcacaa 3192165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 337 - 425
Target Start/End: Complemental strand, 3201071 - 3200983
Alignment:
Q  337 cttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaa 425  Q
    ||||| |||||| ||||||||||||||||  ||||||||||||||||| ||| |||| ||||||||||||| ||||||||| |||||||    
T  3201071 cttccacataccttatgggcacctaagtgtccatacccgcatccattatccgaacttaatctatgaaaagacaataaaaaacatcacaa 3200983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 337 - 425
Target Start/End: Complemental strand, 3209908 - 3209820
Alignment:
Q  337 cttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaa 425  Q
    ||||| |||||| ||||||||||||||||  ||||||||||||||||| ||| |||| ||||||||||||| ||||||||| |||||||    
T  3209908 cttccacataccttatgggcacctaagtgtccatacccgcatccattatccgaacttaatctatgaaaagacaataaaaaacatcacaa 3209820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 343 - 431
Target Start/End: Original strand, 9472963 - 9473051
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaa 431  Q
    |||||| |||||| | |||||| |||||||||||| ||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||    
T  9472963 cataccttatgggtatctaagtactcatacccgcacccattactcgcactttaactatgaaaagacaataaaatatatcacaattgaaa 9473051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 446
Target Start/End: Original strand, 30489673 - 30489784
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||| ||||||| |||||||||||  ||||||| | |||||||||||||||||  ||| |||||  ||||||||| |||| |||||||||||    
T  30489673 cccttccccatatcctatggacacctaagtgcctatacccgtacccattacccgcactttaattataaaaagtcaataaaaaacatcataattgaaataa 30489772  T
Q  435 aaccatgatcca 446  Q
    ||| ||||||||    
T  30489773 aactatgatcca 30489784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 473
Target Start/End: Original strand, 48662672 - 48662803
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataa-aaaatatcacaattgaaataaaaccatg 441  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||||| ||||  |||||||||| ||||| ||||   ||||||||||||||||  ||     
T  48662672 catactctatgggcacctaagtgttcatacccgcacccattacccgcattttaattatgaaaagacaataataaaaacccacaattgaaataaaattatt 48662771  T
Q  442 atccaaaattattcaaatcaattcatataata 473  Q
    ||||||||   |||||||||| ||||| ||||    
T  48662772 atccaaaaaatttcaaatcaactcataaaata 48662803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 945487 - 945588
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||| |||||||| | |||||||| |||||||||| |||||||||||||||||  ||| |||||| ||| ||||| ||||||||||||||||    
T  945487 cccttccccatatcctatgggtatctaagtgcccatacccgcacccattacccgcactttaattataaaaagacaat-aaaaacatcacaattgaaataa 945585  T
Q  435 aac 437  Q
    |||    
T  945586 aac 945588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 343 - 437
Target Start/End: Original strand, 973524 - 973617
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||||||||| |||||||||| |||| ||||| |||||| ||||||||||  |||||||||| ||| ||||| |||||||||||||||||||    
T  973524 cataccctatgggtacctaagtgcacatatccgcacccattatccgcactttaattatgaaaagacaat-aaaaacatcacaattgaaataaaac 973617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 360 - 462
Target Start/End: Original strand, 32133501 - 32133603
Alignment:
Q  360 taagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaat 459  Q
    ||||||| ||||||||||  |||||||||||||||| | ||||||||||||||||||  | |||| |||||||||||| |||||||||| || || ||||    
T  32133501 taagtgcccatacccgcactcattacccgcactttagccatgaaaagataataaaaatcaccacacttgaaataaaactatgatccaaatttttttaaat 32133600  T
Q  460 caa 462  Q
    |||    
T  32133601 caa 32133603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 377 - 449
Target Start/End: Complemental strand, 3821334 - 3821262
Alignment:
Q  377 atccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaa 449  Q
    |||| ||| |||||||||| ||||||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  3821334 atcccttatccgcactttaactatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaa 3821262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 358 - 485
Target Start/End: Complemental strand, 8981646 - 8981516
Alignment:
Q  358 cctaagtgctcatacccgcatccattacccgcactttatctatgaaaag---ataataaaaaatatcacaattgaaataaaaccatgatccaaaattatt 454  Q
    |||| |||| |||||||||| ||||||||  ||||||| ||||||||||   |||| |||||| ||||||||||||||||||| |||||| || |   ||    
T  8981646 cctatgtgcccatacccgcacccattacctacactttaactatgaaaagacaataaaaaaaaacatcacaattgaaataaaacaatgatcaaagaaattt 8981547  T
Q  455 caaatcaattcatataatagtaggaatagta 485  Q
    |||||||| ||||| ||||||| ||||||||    
T  8981546 caaatcaactcataaaatagtacgaatagta 8981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 343 - 435
Target Start/End: Original strand, 28220983 - 28221074
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaa 435  Q
    ||||||||||||| | |||||||| |||||||||| ||||||||||||||||| ||||||||| | |||  |||| |||||||||||||||||    
T  28220983 cataccctatgggtatctaagtgcccatacccgcacccattacccgcactttaactatgaaaaaacaat-gaaaacatcacaattgaaataaa 28221074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 343 - 476
Target Start/End: Complemental strand, 31107741 - 31107608
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgc--atccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccat 440  Q
    ||||||||||||| || ||||||||||||||||   ||||||||| |||||||||  ||||||| || |||||||| |||||||||| ||||||||  ||    
T  31107741 cataccctatgggtacttaagtgctcatacccgtgtatccattactcgcactttaaatatgaaa-gacaataaaaa-tatcacaattaaaataaaattat 31107644  T
Q  441 gatccaaaattattcaaatcaattcatataatagta 476  Q
    | |||||| || |||||||||| ||||| |||||||    
T  31107643 ggtccaaattttttcaaatcaagtcataaaatagta 31107608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 437
Target Start/End: Complemental strand, 2975337 - 2975244
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||||||||| | |||||| | ||||||||||  |||||||| ||||||| ||||||||||| ||| ||||| |||||||||||||||||||    
T  2975337 cataccctatgggtatctaagtacccatacccgcacacattacccccactttaactatgaaaagacaat-aaaaacatcacaattgaaataaaac 2975244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 437
Target Start/End: Original strand, 7842581 - 7842674
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||| ||||||| | |||||||| ||||||||||  |||||||||||||||| ||||||||||| ||| ||||| |||||| ||||||||||||    
T  7842581 catactctatgggtatctaagtgcccatacccgcactcattacccgcactttaactatgaaaagacaat-aaaaacatcacacttgaaataaaac 7842674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 35978610 - 35978508
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| |||||||||| |||||||||| |||||||||||||||||  ||| |||| | || |||| | ||||||| ||| ||||    
T  35978610 cccttccccataccctatgggtacctaagtgcccatacccgcacccattacccgcactttaaatataaaaaaacaaaaaaacacatcacaaatgatataa 35978511  T
Q  435 aac 437  Q
    |||    
T  35978510 aac 35978508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 42069218 - 42069148
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaa 405  Q
    ||||||| ||||||||||||| | |||||||| |||||||||| ||||||||||||||||| |||||||||    
T  42069218 cccttccccataccctatgggtatctaagtgcccatacccgcacccattacccgcactttaactatgaaaa 42069148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 48514447 - 48514553
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatga 442  Q
    |||||||||||||||| ||||||| |||| ||| | |||||||||||| |||| | ||||||||||||||||||  | || | ||||||||| || ||||    
T  48514447 cataccctatgggcacttaagtgcccataaccgtacccattacccgcattttagccatgaaaagataataaaaatcaccatacttgaaataacactatga 48514546  T
Q  443 tccaaaa 449  Q
    |||||||    
T  48514547 tccaaaa 48514553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 335 - 476
Target Start/End: Complemental strand, 30623099 - 30622960
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||| | | |||||||  |||||||||| ||||||||   |||||| ||||||||| | |||||||| |||||| ||||||||||    
T  30623099 cccttccccataccctatgagtagctaagtgtccatacccgcacccattacctatactttaactatgaaaa-acaataaaaa-tatcacgattgaaataa 30623002  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataatagta 476  Q
    | | ||| ||||||| | |||||||||| ||||| |||||||    
T  30623001 atctatggtccaaaaattttcaaatcaactcataaaatagta 30622960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 447
Target Start/End: Complemental strand, 31873399 - 31873291
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||| |||||| | |||||||||||||| ||||||| | | |||| |||| |||||||  ||| |||||| ||||||||| |||||||||||||||||||    
T  31873399 ttccccataccttgtgggcacctaagtgttcatacctgtacccat-acccacactttaattataaaaagacaataaaaaacatcacaattgaaataaaac 31873301  T
Q  438 catgatccaa 447  Q
     |||||||||    
T  31873300 tatgatccaa 31873291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 437
Target Start/End: Complemental strand, 46772572 - 46772483
Alignment:
Q  341 ctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||||||||||||||||| |||| |||||||      |||||| ||||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  46772572 ctcataccctatgggcacctaggtgcccataccc------attaccagcactttaattat-aaaagataataaaaaatatcacaattgaaataaaac 46772483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 437
Target Start/End: Original strand, 10786239 - 10786325
Alignment:
Q  350 tatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||| |||||| |||||||||||| |||  ||||||||| ||||||  |||||||||| ||| |||||||||||||||||||||||||    
T  10786239 tatgagcaccttagtgctcatacctgcactcattacccgtactttaattatgaaaagacaat-aaaaatatcacaattgaaataaaac 10786325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 13312740 - 13312843
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctat-gaaaagataataaaaaatatcacaattgaaata 433  Q
    ||||||| ||||||||||||| || ||||| | |||||||||| ||||||||||||||||| |||| |||||   || |||||| ||||||| |||||||    
T  13312740 cccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttaactatggaaaaacaaaaaaaaaacatcacaaatgaaata 13312839  T
Q  434 aaac 437  Q
    ||||    
T  13312840 aaac 13312843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 335 - 473
Target Start/End: Complemental strand, 33794502 - 33794361
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataa---aaaatatcacaattgaaa 431  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||| ||||||| |||||||||  ||| |||| | || ||   |||| ||||||| |||||    
T  33794502 cccttccccataccctatgggtacctaagtgctcatatccgcacccattactcgcactttaattattaaaaaacaaaaaaacaaaaaatcacaaatgaaa 33794403  T
Q  432 taaaaccatgatccaaaattattcaaatcaattcatataata 473  Q
    |||||| | ||||  ||||| || |||| |||||||| ||||    
T  33794402 taaaactacgatctcaaatttttaaaattaattcataaaata 33794361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 476
Target Start/End: Complemental strand, 2465639 - 2465514
Alignment:
Q  350 tatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaa 449  Q
    ||||||||| | |||| |||||||||||  |||| | || |||||| |||||| |||| |||||||| |||||||||| ||||||||| ||| | ||||     
T  2465639 tatgggcacattagtgttcatacccgcactcattgctcgtactttaactatgagaagacaataaaaa-tatcacaattaaaataaaactatggttcaaat 2465541  T
Q  450 ttattcaaatcaattcatataatagta 476  Q
    || |||||||||| ||||| |||||||    
T  2465540 tttttcaaatcaactcataaaatagta 2465514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 9222250 - 9222351
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| || ||||| | ||||||| || ||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  9222250 cccttccccataccctatgggtacttaagtacccatacccacacccattacccgcactttaactatggaaaaacaa-aaaaaacatcacaaatgaaataa 9222348  T
Q  435 aac 437  Q
    |||    
T  9222349 aac 9222351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 48964474 - 48964404
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaa 405  Q
    ||||||| ||||| ||||||| |||| ||||| |||||||||| ||||||||||||||||| |||||||||    
T  48964474 cccttccccatactctatgggtacctcagtgcccatacccgcacccattacccgcactttaactatgaaaa 48964404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 14106324 - 14106386
Alignment:
Q  332 gtacccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatc 397  Q
    ||||||||||||||||||   |||||||||||||| |||||||||| ||||| |||||||||||||    
T  14106324 gtacccttcctcataccc---gggcacctaagtgcccatacccgcacccattccccgcactttatc 14106386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 368 - 462
Target Start/End: Original strand, 7121041 - 7121135
Alignment:
Q  368 catacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaa 462  Q
    |||||||||| ||||||||||||||||| | ||  ||||||||||||||  | |||| ||||||||||||  ||||||||| || || |||||||    
T  7121041 catacccgcacccattacccgcactttagccatagaaagataataaaaatcaccacacttgaaataaaactgtgatccaaatttttttaaatcaa 7121135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 335 - 401
Target Start/End: Complemental strand, 25815427 - 25815361
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatg 401  Q
    ||||||| ||||||||||||| || ||||| | |||||||||| ||||||||||||||||| |||||    
T  25815427 cccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttaactatg 25815361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 437
Target Start/End: Original strand, 424603 - 424679
Alignment:
Q  360 taagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||| |||||| ||| ||||||||| ||||||| ||||||||||| ||| ||||| ||||||| |||||||||||    
T  424603 taagtgcccatacctgcacccattacccacactttaactatgaaaagacaat-aaaaacatcacaaatgaaataaaac 424679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 474
Target Start/End: Complemental strand, 16177120 - 16177033
Alignment:
Q  387 cgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaattcatataatag 474  Q
    |||||||||  ||| |||||| ||||||||| ||||| ||||||||||||| |||||||||  || || ||||||| ||||| |||||    
T  16177120 cgcactttaattataaaaagacaataaaaaacatcaccattgaaataaaactatgatccaattttttttaaatcaactcataaaatag 16177033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 378
Target Start/End: Complemental strand, 40094610 - 40094567
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcat 378  Q
    ||||||| |||||||||||||||||||||||| |||||||||||    
T  40094610 cccttccccataccctatgggcacctaagtgcccatacccgcat 40094567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 447
Target Start/End: Complemental strand, 4052463 - 4052354
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataat-aaaaaatatcacaattgaaataaaa 436  Q
    |||| |||| |||||||| ||||||||||||||||||| |  |||||||| || ||||  ||| |||| | ||| |||||| ||||| ||||||||||||    
T  4052463 ttccccatatcctatgggtacctaagtgctcatacccgtactcattacccacattttaattataaaaaaacaataaaaaaacatcac-attgaaataaaa 4052365  T
Q  437 ccatgatccaa 447  Q
    | |||||||||    
T  4052364 ctatgatccaa 4052354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 462
Target Start/End: Complemental strand, 40094575 - 40094494
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatat--cacaattgaaataaaaccatgatccaaaattattcaaatcaa 462  Q
    |||||||| |||| ||||||||||| ||||||||| |   ||||||||||||||||| |||||||||||   ||||||||||    
T  40094575 tacccgcattttaactatgaaaagacaataaaaaaaaatccacaattgaaataaaactatgatccaaaaaatttcaaatcaa 40094494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 436
Target Start/End: Original strand, 38491461 - 38491513
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    ||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||    
T  38491461 tacccgcactttaactatgaaaagacaat-aaaaacatcacaattgaaataaaa 38491513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 447
Target Start/End: Complemental strand, 28192550 - 28192482
Alignment:
Q  379 ccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaa 447  Q
    |||||||||||| |||| | ||| ||||||||||||||  | |||| |||||||||||| |||||||||    
T  28192550 ccattacccgcattttagccatggaaagataataaaaatcaccacacttgaaataaaactatgatccaa 28192482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 45816510 - 45816557
Alignment:
Q  399 atgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaa 447  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||||||    
T  45816510 atgaaaagacaataaaa-atatcacaatttaaataaaaccatgatccaa 45816557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 374
Target Start/End: Complemental strand, 46772600 - 46772564
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcataccc 374  Q
    |||| ||||||||||||||||||||||||||||||||    
T  46772600 ttccccataccctatgggcacctaagtgctcataccc 46772564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 481
Target Start/End: Original strand, 2501581 - 2501725
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaa 435  Q
    |||||| ||| || ||||||||||| || || |||||||||| ||||||||| ||||| | || |||||| || |  |||||||||| | || |||||||    
T  2501581 ccttccccatcccttatgggcaccttagcgcccatacccgcacccattacccacacttgaactctgaaaa-atcaataaaaatatcatagttaaaataaa 2501679  T
Q  436 accatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    || ||| | |||||   |||||||||| ||||| || |||| ||||    
T  2501680 actatggttcaaaaaatttcaaatcaactcataaaagagtacgaat 2501725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 23941468 - 23941505
Alignment:
Q  154 gaattctgctcttctctcggcacatttcgctcgcgccc 191  Q
    |||||||||||||||| | |||||||||||||||||||    
T  23941468 gaattctgctcttctcccagcacatttcgctcgcgccc 23941505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 447
Target Start/End: Original strand, 35659564 - 35659667
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattaccc-gcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatg 441  Q
    |||||| |||||| ||||||||| | ||||  ||| ||||||||| |||| ||| ||||||||  | ||||||||  ||||||||||||||||||| |||    
T  35659564 cataccttatgggtacctaagtgtttatacatgcacccattaccccgcacgttaactatgaaat-acaataaaaac-atcacaattgaaataaaactatg 35659661  T
Q  442 atccaa 447  Q
    ||||||    
T  35659662 atccaa 35659667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 377
Target Start/End: Original strand, 38491423 - 38491468
Alignment:
Q  332 gtacccttcctcataccctatgggcacctaagtgctcatacccgca 377  Q
    |||||||||| ||||||||||||| | |||||||| ||||||||||    
T  38491423 gtacccttccccataccctatgggtatctaagtgcccatacccgca 38491468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 1e-36; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 336 - 462
Target Start/End: Original strand, 859511 - 859637
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaa 435  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||| || |||||| | |||||||||||||||    
T  859511 ccttccccataccctatgggcacctaagtgctcatacccgcacccattacccgcattttaactatgaaaagacaaaaaaaaaaaccacaattgaaataaa 859610  T
Q  436 accatgatccaaaattattcaaatcaa 462  Q
    || |||||||||||   ||||||||||    
T  859611 actatgatccaaaaaatttcaaatcaa 859637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 335 - 481
Target Start/End: Original strand, 20216215 - 20216361
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||| | ||||||||| ||||||| |||||| ||| || ||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  20216215 cccttccccatatcttatgggcacttaagtgcccatacctgcacccgttacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataa 20216314  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||| |||||||||||||||| ||||||| | ||| ||||||| ||||    
T  20216315 aactatgatccaaaattatttaaatcaactaataaaatagtacgaat 20216361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 335 - 481
Target Start/End: Original strand, 20235813 - 20235959
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||| | ||||||||| ||||||| |||||| ||| || ||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  20235813 cccttccccatatcttatgggcacttaagtgcccatacctgcacccgttacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataa 20235912  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||| |||||||||||||||| ||||||| | ||| ||||||| ||||    
T  20235913 aactatgatccaaaattatttaaatcaactaataaaatagtacgaat 20235959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 336 - 462
Target Start/End: Original strand, 221992 - 222119
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaaga-taataaaaaatatcacaattgaaataa 434  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||  || |||||| | ||||||||||||||    
T  221992 ccttccccataccctatgggcacctaagtgctcatacccgcacccattacccgcattttaactatgaaaagacaaaaaaaaaaaaccacaattgaaataa 222091  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||   ||||||||||    
T  222092 aactatgatccaaaaaatttcaaatcaa 222119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 336 - 462
Target Start/End: Original strand, 691147 - 691274
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaaga-taataaaaaatatcacaattgaaataa 434  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||  || |||||| | ||||||||||||||    
T  691147 ccttccccataccctatgggcacctaagtgctcatacccgcacccattacccgcattttaactatgaaaagacaaaaaaaaaaaaccacaattgaaataa 691246  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||   ||||||||||    
T  691247 aactatgatccaaaaaatttcaaatcaa 691274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 336 - 462
Target Start/End: Original strand, 735615 - 735742
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaaga-taataaaaaatatcacaattgaaataa 434  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||  || |||||| | ||||||||||||||    
T  735615 ccttccccataccctatgggcacctaagtgctcatacccgcacccattacccgcattttaactatgaaaagacaaaaaaaaaaaaccacaattgaaataa 735714  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| |||||||||||   ||||||||||    
T  735715 aactatgatccaaaaaatttcaaatcaa 735742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 344 - 437
Target Start/End: Original strand, 6109639 - 6109731
Alignment:
Q  344 ataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  6109639 ataccctatgggtacctaagtgctcatacccgcacccattacccgcactttaactatgaaaagacaat-aaaaatatcacaattgaaataaaac 6109731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 335 - 475
Target Start/End: Original strand, 7580065 - 7580203
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaa-tatcacaattgaaata 433  Q
    ||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||   || ||||||||||| |||||||||  |||||||||||||||    
T  7580065 cccttccccataccctatgggcacctaagtgcccatacccgcacccattacccgca---taactatgaaaagacaataaaaaagcatcacaattgaaata 7580161  T
Q  434 aaaccatgatccaaaattattcaaatcaattcatataatagt 475  Q
    |||  |||||||||||   |||||||||| ||||| ||||||    
T  7580162 aaaatatgatccaaaaaatttcaaatcaactcataaaatagt 7580203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 437
Target Start/End: Complemental strand, 24891521 - 24891417
Alignment:
Q  332 gtacccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaa 431  Q
    |||||||| | ||||||||||||| ||||||||||   |||||||| ||||||||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  24891521 gtaccctttcccataccctatgggtacctaagtgcctgtacccgcacccattacccgcactttaactatgaaaagacaat-aaaaatatcacaattgaaa 24891423  T
Q  432 taaaac 437  Q
    ||||||    
T  24891422 taaaac 24891417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 2621058 - 2620960
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||| ||||||||||||| | |||||||| |||||| ||| ||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||    
T  2621058 ttccccataccctatgggtatctaagtgcccatacctgcacccattacccgcactttaactatgaaaagataata-aaaacatcacaattgaaataaaac 2620960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 367 - 473
Target Start/End: Complemental strand, 39221631 - 39221525
Alignment:
Q  367 tcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaattca 466  Q
    ||||||||||| ||||||||||||||||| | ||||||||| ||||||||| | |||||||||||| ||||| ||||||||||  ||||||||||| |||    
T  39221631 tcatacccgcacccattacccgcactttaaccatgaaaagacaataaaaaacaccacaattgaaattaaaccgtgatccaaaaaaattcaaatcaactca 39221532  T
Q  467 tataata 473  Q
    || ||||    
T  39221531 taaaata 39221525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 437
Target Start/End: Original strand, 25500151 - 25500255
Alignment:
Q  332 gtacccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaa 431  Q
    |||||||||| |||||| |||||| |||||||||| |||||||||| |||||||| ||||||||  |||||||||| ||||||||  |||||||||||||    
T  25500151 gtacccttccccataccttatgggtacctaagtgcccatacccgcacccattacctgcactttaaatatgaaaagacaataaaaac-atcacaattgaaa 25500249  T
Q  432 taaaac 437  Q
    ||||||    
T  25500250 taaaac 25500255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 481
Target Start/End: Original strand, 38020056 - 38020203
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaa-tatcacaattgaaata 433  Q
    ||||||| |||||||||||||||||||||||  |||||||||| |||||||||||| |||| || |||||||| |||||||||  | ||||| |||||||    
T  38020056 cccttccccataccctatgggcacctaagtgtccatacccgcacccattacccgcagtttaactctgaaaagacaataaaaaagcaccacaactgaaata 38020155  T
Q  434 aaaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
     ||| || ||||| ||   |||||||||| ||||| ||||||| ||||    
T  38020156 caactattatccagaaaatttcaaatcaactcataaaatagtatgaat 38020203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 19643614 - 19643513
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||||||||||||||||| | ||| |||| |||||||||  ||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||| ||    
T  19643614 cccttcctcataccctatgggtatctaggtgcccatacccgcgcccattacccgcactttaactatgaaaagacaat-aaaaacatcacaattgaaaaaa 19643516  T
Q  435 aac 437  Q
    |||    
T  19643515 aac 19643513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 24789520 - 24789622
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||||||||||||||||| || ||||||  |||||||||| ||||||||||||||||| ||||| ||| | || |||||| ||||||| ||||||||    
T  24789520 cccttcctcataccctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatggaaaaacaaaaaaaaacatcacaaatgaaataa 24789619  T
Q  435 aac 437  Q
    |||    
T  24789620 aac 24789622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 1376196 - 1376297
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatg--aaaagataataaaaaatatcacaattgaaataaa 435  Q
    ||||| |||||||||||| |||||||||| |||||||||| ||||||||||||||||| |||||  |||| | || |||||| ||||||| |||||||||    
T  1376196 ttccttataccctatgggtacctaagtgcccatacccgcacccattacccgcactttaactatgaaaaaacaaaaaaaaaaacatcacaaatgaaataaa 1376295  T
Q  436 ac 437  Q
    ||    
T  1376296 ac 1376297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 447
Target Start/End: Complemental strand, 37226870 - 37226761
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||| |||||||||||||||||||||||| ||||| || ||| |||| ||||||||||  ||  |||||| ||||||||| ||||| |||||||||||||    
T  37226870 ttccccataccctatgggcacctaagtgcccatactcgtatctattatccgcactttaattacaaaaagacaataaaaaacatcacgattgaaataaaac 37226771  T
Q  438 catgatccaa 447  Q
     || ||||||    
T  37226770 tattatccaa 37226761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 335 - 447
Target Start/End: Complemental strand, 26561328 - 26561217
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||| ||||||| | |||||||||| ||||||| || ||||||| ||||||||| ||||||||||| ||| ||||| ||||||||||| ||||    
T  26561328 cccttccccatgccctatgagtacctaagtgcccatacccacacccattacacgcactttaactatgaaaagacaat-aaaaacatcacaattgatataa 26561230  T
Q  435 aaccatgatccaa 447  Q
    ||| ||| |||||    
T  26561229 aactatggtccaa 26561217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 2472378 - 2472280
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||| ||||||||||||| || ||||||| ||||||||||||||| ||||| |||||| |||| |||||| ||| ||||| ||||||||| |||||||||    
T  2472378 ttccccataccctatgggtacataagtgcccatacccgcatccataacccgtactttaactattaaaagacaat-aaaaacatcacaattaaaataaaac 2472280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 437
Target Start/End: Complemental strand, 15961775 - 15961670
Alignment:
Q  332 gtacccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaa 431  Q
    |||||||||||||||  ||||||||||||| |||| |||||  | | |||||||||||| ||||  ||| |||||| ||||||||| ||||||||| |||    
T  15961775 gtacccttcctcatattctatgggcacctacgtgcccatacatgtacccattacccgcattttaattataaaaagacaataaaaaacatcacaattaaaa 15961676  T
Q  432 taaaac 437  Q
    ||||||    
T  15961675 taaaac 15961670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 437
Target Start/End: Original strand, 25419272 - 25419376
Alignment:
Q  332 gtacccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaa 431  Q
    |||||||| | ||||||||||||| || ||||||| ||||| |||  |||||||| |||||||| ||||||||||| ||| ||||| |||||| ||||||    
T  25419272 gtaccctttcccataccctatgggtacttaagtgcccatacacgctcccattacctgcactttaactatgaaaagaaaat-aaaaacatcacagttgaaa 25419370  T
Q  432 taaaac 437  Q
    ||||||    
T  25419371 taaaac 25419376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 362 - 489
Target Start/End: Complemental strand, 29528261 - 29528135
Alignment:
Q  362 agtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatca 461  Q
    |||| ||||||||| | | |||||||||| |||| |||||||||||| || |||||||||| || |||| |||||| ||| | ||||| | |||||||||    
T  29528261 agtggtcatacccgtacctattacccgcattttaactatgaaaagatgat-aaaaatatcaaaactgaagtaaaactatggttcaaaaattttcaaatca 29528163  T
Q  462 attcatataatagtaggaatagtattat 489  Q
    | ||||| ||||||| |||| |||||||    
T  29528162 actcataaaatagtacgaatcgtattat 29528135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 481
Target Start/End: Original strand, 7057613 - 7057757
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| ||||||||||||| |||||||||| ||||| || | ||||||| ||||||||| ||||||||| | |||  |||| |||| ||||||||||     
T  7057613 cccttccccataccctatgggtacctaagtgcacatactcgtacccattactcgcactttaactatgaaaaaacaat-gaaaacatcataattgaaatag 7057711  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||| |||| ||||| || || |||| || ||||| ||||||| ||||    
T  7057712 aactatga-ccaaattttttaaaattaactcataaaatagtatgaat 7057757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 437
Target Start/End: Original strand, 45553100 - 45553176
Alignment:
Q  360 taagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    |||||||| |||||||||||||||||| ||| |||| ||||||||||| || ||| || |||||||||||||||||||    
T  45553100 taagtgcttatacccgcatccattacctgcattttaactatgaaaagacaa-aaagaacatcacaattgaaataaaac 45553176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 3616965 - 3616895
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaa 405  Q
    ||||||| ||||||||||||| |||||||| | ||||| |||| | ||||||||||||||| |||||||||    
T  3616965 cccttccccataccctatgggtacctaagtacccatactcgcacctattacccgcactttaactatgaaaa 3616895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 477
Target Start/End: Original strand, 15542148 - 15542285
Alignment:
Q  341 ctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataat-aaaaaatatcacaattgaaataaaacca 439  Q
    |||||| | ||||||||||||||||| |||||||  | |||||||| ||||||||  ||| |||||  ||| |||||| ||||||||| ||||||||| |    
T  15542148 ctcatatcttatgggcacctaagtgcccatacccatacccattacctgcactttaattataaaaaggcaataaaaaaacatcacaattaaaataaaacta 15542247  T
Q  440 tgatccaaaattattcaaatcaattcatataatagtag 477  Q
     |||||||  || || ||| ||| ||||| ||||||||    
T  15542248 agatccaatttttttaaaagcaactcataaaatagtag 15542285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 476
Target Start/End: Original strand, 43511244 - 43511340
Alignment:
Q  379 ccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaattcatataatagta 476  Q
    |||||| | |||||||| ||||||||||| |||||||| ||| |||||||||||||||  ||| | |||| || |||||||||| ||||| |||||||    
T  43511244 ccattatctgcactttaactatgaaaagacaataaaaa-tataacaattgaaataaaattatggttcaaattttttcaaatcaactcataaaatagta 43511340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 395
Target Start/End: Original strand, 1667264 - 1667324
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcacttta 395  Q
    ||||||| ||||||||||||| |||||||||| |||||||||| |||||| || |||||||    
T  1667264 cccttccccataccctatgggtacctaagtgcccatacccgcacccattaacctcacttta 1667324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 436
Target Start/End: Original strand, 43239235 - 43239290
Alignment:
Q  380 cattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    ||||||| |||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  43239235 cattacctgcactttaactatgaaaagataat-aaaaatatcacaattgaactaaaa 43239290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 462
Target Start/End: Original strand, 38551621 - 38551700
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaa 462  Q
    ||||||||||||| | ||| ||||||||||||||  | |||| |||||||||||| |||||||||| || || |||||||    
T  38551621 tacccgcactttagccatggaaagataataaaaatcaccacatttgaaataaaactatgatccaaatttttttaaatcaa 38551700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 433
Target Start/End: Original strand, 30801265 - 30801352
Alignment:
Q  344 ataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaata 433  Q
    |||||||||||| |||||||||  |||||||| | |||||| || ||||||| ||||||||||| |||  |||| |||||||||||||||    
T  30801265 ataccctatgggtacctaagtgtccatacccgtacccatta-ccacactttaactatgaaaagacaat-gaaaacatcacaattgaaata 30801352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 473
Target Start/End: Complemental strand, 25179050 - 25178922
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatga 442  Q
    |||| |||||||| | || ||||| ||||| |||||| |||||||||| |||| ||| ||||  | |||||||| |||||| ||||||||||||| |||     
T  25179050 catatcctatgggtatcttagtgcacatacgcgcatc-attacccgcattttaactaagaaacaacaataaaaa-tatcaccattgaaataaaactatgg 25178953  T
Q  443 tccaaaattattcaaatcaattcatataata 473  Q
    | |||||   |||||||||| ||||| ||||    
T  25178952 ttcaaaaaatttcaaatcaactcataaaata 25178922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 377
Target Start/End: Original strand, 38551586 - 38551628
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgca 377  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  38551586 cccttccccataccctatgggcacttaagtgcccatacccgca 38551628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 444
Target Start/End: Original strand, 33212341 - 33212373
Alignment:
Q  412 aaaaaatatcacaattgaaataaaaccatgatc 444  Q
    |||||| ||||||||||||||||||||||||||    
T  33212341 aaaaaacatcacaattgaaataaaaccatgatc 33212373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 335 - 473
Target Start/End: Complemental strand, 26226 - 26087
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaata-tcacaattgaaata 433  Q
    |||||||||||||||||||| |||||||||||||||| |||||  ||||||||||| |||| ||||||||||| ||||||||| |  |||||||||||||    
T  26226 cccttcctcataccctatggtcacctaagtgctcataaccgcactcattacccgcattttaactatgaaaagacaataaaaaaaagccacaattgaaata 26127  T
Q  434 aaaccatgatccaaaattattcaaatcaattcatataata 473  Q
    |||| |||||||||||   |||||||||| ||||| ||||    
T  26126 aaactatgatccaaaaaatttcaaatcaactcataaaata 26087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 343 - 444
Target Start/End: Complemental strand, 222053 - 221952
Alignment:
Q  343 cataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatga 442  Q
    |||||| ||||| |||||||||||||||||||| |||||||||||||||||||  ||| ||| || ||||||||||||||| ||||||||||||| ||||    
T  222053 cataccttatggacacctaagtgctcatacccgtatccattacccgcactttaattataaaacgacaataaaaaatatcaccattgaaataaaactatga 221954  T
Q  443 tc 444  Q
    ||    
T  221953 tc 221952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 240566 - 240470
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||| |||||||| |||| ||||| ||||||||||||||||| |||||||||| |||||||||      |||||||||||||| ||||||||    
T  240566 cccttccccatatcctatgggtacctcagtgcccatacccgcatccattatccgcactttaactatgaaaa------aaaaaatatcacaaatgaaataa 240473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 110105 - 109978
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||| |||||||| || ||||||||||||||| || | ||||||||||||||| | ||||||||||||||||||  | |||| |||||||||    
T  110105 cccttccccatatcctatgggtacttaagtgctcataccctcacctattacccgcactttagccatgaaaagataataaaaatcaccacacttgaaataa 110006  T
Q  435 aaccatgatccaaaattattcaaatcaa 462  Q
    ||| ||||| |||| || || |||||||    
T  110005 aactatgattcaaatttttttaaatcaa 109978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0602 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0602
Description:

Target: scaffold0602; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 481
Target Start/End: Original strand, 5049 - 5161
Alignment:
Q  368 catacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaattcat 467  Q
    ||||||||||||||||| |  |||||||  |||||||||| ||||||| |||||||||||||| ||||| |||| | ||||| | |||||||||| ||||    
T  5049 catacccgcatccattatctacactttaattatgaaaagacaataaaa-atatcacaattgaactaaaatcatggttcaaaaattttcaaatcaactcat 5147  T
Q  468 ataatagtaggaat 481  Q
    | ||||||| ||||    
T  5148 aaaatagtacgaat 5161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 449
Target Start/End: Original strand, 20041 - 20155
Alignment:
Q  335 cccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataa 434  Q
    ||||||| |||| | |||||  || ||||||  |||||||||| |||||||||||| |||| | ||||||||| ||| |||||  |||||||||||||||    
T  20041 cccttccccatatcttatggatacttaagtgtccatacccgcacccattacccgcattttaaccatgaaaagacaattaaaaacgtcacaattgaaataa 20140  T
Q  435 aaccatgatccaaaa 449  Q
    ||  |||||||||||    
T  20141 aattatgatccaaaa 20155  T

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Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 481
Target Start/End: Original strand, 250167 - 250313
Alignment:
Q  336 ccttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattg-aaataa 434  Q
    |||||| |||||| |||||||  |||||| |||||||  | | |||||| |||||||||| |||| |||||| ||||||| |||||||||||| ||||||    
T  250167 ccttccccataccttatgggcgtctaagtactcatacatgtacccattatccgcactttaactatcaaaagacaataaaatatatcacaattgaaaataa 250266  T
Q  435 aaccatgatccaaaattattcaaatcaattcatataatagtaggaat 481  Q
    ||  ||| ||| ||| | || ||||||| ||||| ||||||| ||||    
T  250267 aattatggtcccaaaatttttaaatcaactcataaaatagtacgaat 250313  T

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Target: scaffold0938 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0938
Description:

Target: scaffold0938; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 476
Target Start/End: Original strand, 472 - 615
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatg-----aaaagataataaaaaatatcacaattgaaat 432  Q
    |||| ||||||||||||| || ||||||| |||||||||| ||||||||||||||||| | |||      ||||| |||| |||| |  |||||||||||    
T  472 ttccacataccctatgggtacttaagtgcccatacccgcacccattacccgcactttaaccatgcaaattaaagacaatagaaaacactacaattgaaat 571  T
Q  433 aaaaccatgatccaaaattattcaaatcaattcatataatagta 476  Q
    ||||  |||||||||||   |||||||||| | ||| |||||||    
T  572 aaaattatgatccaaaaaatttcaaatcaactaataaaatagta 615  T

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Target: scaffold0062 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 476
Target Start/End: Complemental strand, 23980 - 23837
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatg-----aaaagataataaaaaatatcacaattgaaat 432  Q
    |||| ||||||||||||| || ||||||| |||||||||| ||||||||||||||||| | |||      ||||| |||| |||| |  |||||||||||    
T  23980 ttccacataccctatgggtacttaagtgcccatacccgcacccattacccgcactttaaccatgcaaattaaagacaatagaaaacactacaattgaaat 23881  T
Q  433 aaaaccatgatccaaaattattcaaatcaattcatataatagta 476  Q
    ||||  |||||||||||   |||||||||| | ||| |||||||    
T  23880 aaaattatgatccaaaaaatttcaaatcaactaataaaatagta 23837  T

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Target: scaffold0062; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 476
Target Start/End: Complemental strand, 34148 - 34005
Alignment:
Q  338 ttcctcataccctatgggcacctaagtgctcatacccgcatccattacccgcactttatctatg-----aaaagataataaaaaatatcacaattgaaat 432  Q
    |||| ||||||||||||| || ||||||| |||||||||| ||||||||||||||||| | |||      ||||| |||| |||| |  |||||||||||    
T  34148 ttccacataccctatgggtacttaagtgcccatacccgcacccattacccgcactttaaccatgcaaattaaagacaatagaaaacactacaattgaaat 34049  T
Q  433 aaaaccatgatccaaaattattcaaatcaattcatataatagta 476  Q
    ||||  |||||||||||   |||||||||| | ||| |||||||    
T  34048 aaaattatgatccaaaaaatttcaaatcaactaataaaatagta 34005  T

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Target: scaffold0312 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 437
Target Start/End: Complemental strand, 5946 - 5870
Alignment:
Q  360 taagtgctcatacccgcatccattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaac 437  Q
    ||||||| |||||| ||| ||||||||| ||||||| ||||||||||| ||| ||||| ||||||| |||||||||||    
T  5946 taagtgcccatacctgcacccattacccacactttaactatgaaaagacaat-aaaaacatcacaaatgaaataaaac 5870  T

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Target: scaffold0242 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 476
Target Start/End: Complemental strand, 13137 - 13044
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaattcatataatagta 476  Q
    ||||||||||||| | ||||||||| ||||||||| |  |||||||||||||||  |||||||||||   |||||||||| | ||| |||||||    
T  13137 tacccgcactttaaccatgaaaagacaataaaaaacactacaattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagta 13044  T

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Target: scaffold0242; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 476
Target Start/End: Complemental strand, 21972 - 21879
Alignment:
Q  383 tacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaaccatgatccaaaattattcaaatcaattcatataatagta 476  Q
    ||||||||||||| | ||||||||| ||||||||| |  |||||||||||||||  |||||||||||   |||||||||| | ||| |||||||    
T  21972 tacccgcactttaaccatgaaaagacaataaaaaacactacaattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagta 21879  T

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Target: scaffold0102 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 436
Target Start/End: Original strand, 16503 - 16559
Alignment:
Q  380 cattacccgcactttatctatgaaaagataataaaaaatatcacaattgaaataaaa 436  Q
    |||||| || |||||| |||| |||||| |||||||||||||| |||||||||||||    
T  16503 cattactcgtactttaactataaaaagacaataaaaaatatcagaattgaaataaaa 16559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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