View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7831_low_7 (Length: 451)

Name: NF7831_low_7
Description: NF7831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7831_low_7
NF7831_low_7
[»] chr7 (29 HSPs)
chr7 (1-438)||(5312289-5312747)
chr7 (4-170)||(5636653-5636806)
chr7 (355-440)||(18496716-18496801)
chr7 (355-439)||(1074605-1074689)
chr7 (1-95)||(24596506-24596600)
chr7 (98-171)||(3268523-3268596)
chr7 (355-440)||(21545705-21545790)
chr7 (355-439)||(29544672-29544756)
chr7 (369-425)||(12358655-12358711)
chr7 (355-439)||(20017106-20017189)
chr7 (355-439)||(23125053-23125137)
chr7 (4-75)||(9552676-9552747)
chr7 (1-75)||(9801072-9801146)
chr7 (98-205)||(4829239-4829347)
chr7 (8-95)||(4092004-4092091)
chr7 (355-430)||(20470688-20470763)
chr7 (1-75)||(9760630-9760704)
chr7 (355-439)||(7494849-7494932)
chr7 (366-438)||(9801764-9801835)
chr7 (98-174)||(21545447-21545523)
chr7 (98-165)||(3400277-3400344)
chr7 (365-424)||(14649663-14649722)
chr7 (404-439)||(20461575-20461610)
chr7 (98-212)||(24596591-24596706)
chr7 (1-90)||(22334795-22334884)
chr7 (177-221)||(1074889-1074934)
chr7 (374-439)||(9761313-9761377)
chr7 (366-439)||(20446355-20446427)
chr7 (1-37)||(17880453-17880489)
[»] chr2 (31 HSPs)
chr2 (1-194)||(18235822-18236015)
chr2 (365-431)||(17152314-17152380)
chr2 (98-156)||(39732119-39732177)
chr2 (98-174)||(24047777-24047853)
chr2 (99-174)||(17862832-17862907)
chr2 (25-95)||(27917557-27917627)
chr2 (1-90)||(9504430-9504517)
chr2 (1-90)||(9515796-9515883)
chr2 (355-399)||(18236181-18236225)
chr2 (98-182)||(18819115-18819199)
chr2 (355-439)||(21505017-21505101)
chr2 (100-155)||(21848066-21848121)
chr2 (98-172)||(15454096-15454169)
chr2 (366-436)||(30998927-30998996)
chr2 (355-425)||(31262163-31262233)
chr2 (98-164)||(31262413-31262479)
chr2 (354-438)||(14921916-14922000)
chr2 (110-157)||(12363574-12363621)
chr2 (1-95)||(14921599-14921691)
chr2 (1-95)||(17884075-17884168)
chr2 (365-431)||(18117142-18117208)
chr2 (389-439)||(19541189-19541239)
chr2 (355-409)||(31274138-31274192)
chr2 (97-162)||(13802107-13802172)
chr2 (100-165)||(17414764-17414828)
chr2 (355-420)||(18818873-18818938)
chr2 (11-79)||(22511401-22511470)
chr2 (371-439)||(15454433-15454501)
chr2 (371-439)||(17415058-17415125)
chr2 (355-439)||(22511098-22511182)
chr2 (355-439)||(27417141-27417225)
[»] chr4 (41 HSPs)
chr4 (1-223)||(29437815-29438026)
chr4 (98-254)||(7023823-7023979)
chr4 (355-439)||(7024097-7024181)
chr4 (355-439)||(5676352-5676436)
chr4 (98-211)||(23353994-23354107)
chr4 (99-198)||(22120082-22120182)
chr4 (355-431)||(31859779-31859855)
chr4 (355-439)||(34864174-34864257)
chr4 (98-165)||(26160266-26160333)
chr4 (97-165)||(31859476-31859545)
chr4 (355-420)||(33519201-33519266)
chr4 (388-439)||(9288362-9288413)
chr4 (98-153)||(12028484-12028539)
chr4 (1-95)||(13066241-13066336)
chr4 (1-192)||(19602200-19602380)
chr4 (102-208)||(21077680-21077786)
chr4 (369-436)||(22119776-22119843)
chr4 (98-161)||(33519488-33519551)
chr4 (370-439)||(13064578-13064647)
chr4 (370-439)||(15192356-15192424)
chr4 (366-438)||(17187326-17187398)
chr4 (355-439)||(27302930-27303013)
chr4 (363-430)||(25315118-25315184)
chr4 (384-439)||(29437623-29437678)
chr4 (98-164)||(4733157-4733223)
chr4 (97-139)||(10079756-10079798)
chr4 (24-82)||(17184165-17184223)
chr4 (369-439)||(19601951-19602020)
chr4 (8-90)||(26160329-26160410)
chr4 (1-75)||(26188283-26188356)
chr4 (366-439)||(1695736-1695808)
chr4 (1-90)||(4733219-4733307)
chr4 (1-78)||(18444733-18444809)
chr4 (366-439)||(21077385-21077458)
chr4 (1-77)||(5676720-5676795)
chr4 (366-430)||(5906652-5906716)
chr4 (1-37)||(10577026-10577062)
chr4 (355-439)||(17026575-17026658)
chr4 (98-154)||(22344121-22344176)
chr4 (102-154)||(34666248-34666300)
chr4 (366-430)||(47024655-47024718)
[»] chr8 (32 HSPs)
chr8 (11-221)||(14184317-14184529)
chr8 (1-95)||(30850564-30850657)
chr8 (366-439)||(13583409-13583482)
chr8 (1-95)||(11437909-11438003)
chr8 (355-439)||(28291979-28292063)
chr8 (261-349)||(27097551-27097639)
chr8 (355-439)||(16052155-16052239)
chr8 (4-208)||(18771340-18771533)
chr8 (17-173)||(30544172-30544319)
chr8 (367-439)||(11437571-11437644)
chr8 (355-439)||(5153910-5153994)
chr8 (355-399)||(5570018-5570062)
chr8 (355-439)||(11310134-11310217)
chr8 (6-90)||(29292369-29292453)
chr8 (355-439)||(30850978-30851062)
chr8 (355-437)||(6888071-6888153)
chr8 (1-83)||(24927366-24927448)
chr8 (369-430)||(28859131-28859192)
chr8 (355-439)||(24120376-24120460)
chr8 (355-438)||(13081813-13081895)
chr8 (102-165)||(24927455-24927517)
chr8 (99-162)||(28074945-28075008)
chr8 (366-428)||(24696745-24696807)
chr8 (108-165)||(6887810-6887866)
chr8 (371-436)||(29291925-29291990)
chr8 (97-165)||(5569765-5569832)
chr8 (355-439)||(14424691-14424775)
chr8 (1-88)||(24094676-24094760)
chr8 (104-156)||(27085170-27085222)
chr8 (355-395)||(27097680-27097720)
chr8 (355-439)||(28901228-28901311)
chr8 (98-150)||(29292279-29292331)
[»] chr5 (30 HSPs)
chr5 (98-208)||(23157380-23157492)
chr5 (4-165)||(18178592-18178740)
chr5 (356-439)||(11274209-11274292)
chr5 (4-95)||(18281725-18281816)
chr5 (5-88)||(19763406-19763488)
chr5 (98-159)||(20695088-20695149)
chr5 (1-78)||(22930492-22930568)
chr5 (355-431)||(24841914-24841989)
chr5 (102-165)||(17695051-17695114)
chr5 (356-439)||(30072268-30072351)
chr5 (354-438)||(7742747-7742831)
chr5 (355-439)||(16634199-16634283)
chr5 (355-439)||(26329948-26330031)
chr5 (366-437)||(19331664-19331735)
chr5 (98-213)||(24131034-24131148)
chr5 (365-439)||(26070626-26070700)
chr5 (355-439)||(16622555-16622638)
chr5 (4-64)||(22643459-22643519)
chr5 (98-212)||(25368042-25368158)
chr5 (102-165)||(7742484-7742547)
chr5 (2-37)||(17381516-17381551)
chr5 (368-439)||(20694792-20694863)
chr5 (1-88)||(25594164-25594250)
chr5 (98-139)||(22755442-22755483)
chr5 (355-439)||(17027680-17027763)
chr5 (102-182)||(18452420-18452500)
chr5 (355-439)||(18452690-18452774)
chr5 (355-439)||(22229957-22230040)
chr5 (97-153)||(24846600-24846656)
chr5 (355-439)||(25594570-25594654)
[»] chr3 (23 HSPs)
chr3 (98-184)||(11475290-11475376)
chr3 (366-439)||(19219100-19219173)
chr3 (355-439)||(16970614-16970698)
chr3 (6-89)||(18474719-18474802)
chr3 (366-439)||(11474999-11475072)
chr3 (11-208)||(26298186-26298372)
chr3 (4-89)||(19542605-19542690)
chr3 (366-438)||(10341940-10342012)
chr3 (4-165)||(10342208-10342357)
chr3 (7-95)||(21828718-21828805)
chr3 (368-430)||(13911419-13911480)
chr3 (17-95)||(19285607-19285684)
chr3 (1-37)||(14280800-14280836)
chr3 (355-430)||(19263782-19263860)
chr3 (366-430)||(23908160-23908224)
chr3 (366-430)||(26418881-26418945)
chr3 (1-36)||(22488379-22488414)
chr3 (98-165)||(33578209-33578276)
chr3 (369-439)||(21829025-21829095)
chr3 (390-439)||(26387758-26387807)
chr3 (1-37)||(8401915-8401951)
chr3 (106-174)||(16970890-16970958)
chr3 (4-36)||(19218708-19218740)
[»] chr1 (33 HSPs)
chr1 (355-439)||(26854198-26854282)
chr1 (354-439)||(18300880-18300965)
chr1 (1-78)||(25778263-25778340)
chr1 (9-213)||(52270740-52270940)
chr1 (355-438)||(25373899-25373982)
chr1 (1-88)||(25665298-25665385)
chr1 (1-88)||(50047605-50047691)
chr1 (1-78)||(21549176-21549253)
chr1 (355-439)||(11769872-11769956)
chr1 (355-439)||(26102209-26102293)
chr1 (355-439)||(30675637-30675720)
chr1 (356-430)||(25727788-25727862)
chr1 (356-430)||(25736196-25736270)
chr1 (1-78)||(25731004-25731081)
chr1 (355-436)||(50047330-50047411)
chr1 (134-213)||(15298502-15298581)
chr1 (97-165)||(27460471-27460539)
chr1 (355-431)||(52271123-52271199)
chr1 (355-418)||(25494367-25494430)
chr1 (1-52)||(34533183-34533234)
chr1 (98-160)||(26853916-26853978)
chr1 (355-439)||(19257684-19257766)
chr1 (365-438)||(31313705-31313778)
chr1 (355-419)||(21548820-21548884)
chr1 (97-165)||(34533083-34533151)
chr1 (102-165)||(25126901-25126964)
chr1 (135-192)||(14745070-14745128)
chr1 (365-439)||(27461069-27461143)
chr1 (355-431)||(23519647-23519722)
chr1 (370-430)||(25730464-25730524)
chr1 (1-37)||(30675994-30676030)
chr1 (355-439)||(30781913-30781996)
chr1 (365-428)||(31319499-31319563)
[»] chr6 (23 HSPs)
chr6 (96-220)||(15349100-15349225)
chr6 (106-203)||(15382087-15382184)
chr6 (3-81)||(13830419-13830496)
chr6 (1-95)||(16528162-16528255)
chr6 (366-436)||(33638394-33638464)
chr6 (96-220)||(15318451-15318576)
chr6 (366-431)||(26499736-26499801)
chr6 (98-162)||(22262835-22262899)
chr6 (1-220)||(15375821-15376040)
chr6 (1-95)||(26499365-26499458)
chr6 (369-430)||(30355478-30355539)
chr6 (357-421)||(24618053-24618117)
chr6 (266-329)||(17198575-17198638)
chr6 (98-165)||(32930065-32930132)
chr6 (97-147)||(10976662-10976712)
chr6 (104-165)||(17198407-17198468)
chr6 (104-163)||(12971952-12972011)
chr6 (1-95)||(22262890-22262983)
chr6 (366-439)||(9396496-9396569)
chr6 (1-37)||(12971867-12971903)
chr6 (355-399)||(17860327-17860371)
chr6 (8-52)||(28178541-28178585)
chr6 (1-29)||(30235879-30235907)
[»] scaffold0386 (3 HSPs)
scaffold0386 (1-174)||(8241-8401)
scaffold0386 (1-165)||(11271-11422)
scaffold0386 (356-424)||(11678-11746)
[»] scaffold0171 (2 HSPs)
scaffold0171 (354-439)||(6348-6432)
scaffold0171 (366-430)||(21559-21623)
[»] scaffold0190 (2 HSPs)
scaffold0190 (102-154)||(11265-11317)
scaffold0190 (355-439)||(11576-11660)
[»] scaffold0282 (1 HSPs)
scaffold0282 (355-439)||(22492-22575)
[»] scaffold0188 (1 HSPs)
scaffold0188 (355-439)||(26833-26917)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-37)||(227709-227745)
scaffold0011 (355-399)||(228065-228109)
[»] scaffold0337 (2 HSPs)
scaffold0337 (97-158)||(3603-3664)
scaffold0337 (9-37)||(3714-3742)
[»] scaffold0065 (2 HSPs)
scaffold0065 (98-162)||(12731-12796)
scaffold0065 (9-37)||(12847-12875)
[»] scaffold0650 (1 HSPs)
scaffold0650 (355-439)||(5648-5731)


Alignment Details
Target: chr7 (Bit Score: 379; Significance: 0; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 1 - 438
Target Start/End: Original strand, 5312289 - 5312747
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatgctttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5312289 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgactcttgccttgtaccactagctttctcaatgctttt 5312388  T
Q  101 ctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatttgggttttccactaaaaacaacttgg 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5312389 cggaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatttgggttttccactaaaaacaacttgg 5312488  T
Q  201 aaaacaagcaaaagtcacctcctgtctgtcaaccaagtgtggggcgcatgaagtgaggcgcatggggcatcaaggaatgttgtctcatgcgc-------- 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  5312489 aaaacaagcaaaagtcacctcctgtctgtcaaccaagtgtggggcgcatgaagtgaggcgcatggggcatcaaggaatgttgtctcatgcgcagcggcgc 5312588  T
Q  293 -------------aggggcgcatgaggcagtgccttcaatgcgaattttgcattttcatcccttttttgatccctttttcttcatcttgtattgtcttca 379  Q
                 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5312589 atggcccatgcataggggcgcatgaagcagtgccttcaatgcgaattttgcattttcatcccttttttgatccctttttcttcatcttgtattgtcttca 5312688  T
Q  380 aaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5312689 aaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 5312747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 170
Target Start/End: Complemental strand, 5636806 - 5636653
Alignment:
Q  4 ataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatgcttttctg 103  Q
    ||||||||||||||||||||||||| |||||||| | | ||||||| ||  | ||| |||||| ||||||||||| |||||||||||            |    
T  5636806 ataccctagagagaacaagaggaggttggagatcatctgccttgaagctt-tgatgcttgaccattgccttgtactactagctttct------------g 5636720  T
Q  104 aatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaa 170  Q
    ||||||||||| |||||||||| |||||| |||||||| ||||||||||||| | ||||||| ||||    
T  5636719 aatgaataaaagtgtgtgcaagggtctctatttatagtgcatcattacttagtgattaagagatgaa 5636653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 355 - 440
Target Start/End: Complemental strand, 18496801 - 18496716
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtcc 440  Q
    |||||||||||||||||| ||||||| ||  ||||||||||||||  | ||||||| ||||||||||||||||||||| |||||||    
T  18496801 ttttcttcatcttgtattttcttcaacaacattctaagaaccattattcttcaatcttcatatccttgatccttcactcgatgtcc 18496716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 1074689 - 1074605
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||||||||||||||||||| || ||| |||||||||||  | ||||||  ||||||||||||||||| ||||||||||    
T  1074689 ttttcttcatcttgtattgtcttcaacaaccttttaagaaccattggtcttcaattttcatatccttgatcctttacttgatgtc 1074605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24596506 - 24596600
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatg 95  Q
    ||||||| |||||||||||||||||| ||| |||||| | | ||||||| ||||| ||| ||||||||||||||||||||  |||||||| ||||    
T  24596506 aacatacactagagagaacaagaggatgatagagatcatctgccttgaagctcctgatgcttgacccttgccttgtaccatcagctttctgaatg 24596600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 3268523 - 3268596
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaa 171  Q
    |||||||| |||||||| ||||||||||||||| | | |||||||||||||||||||||| ||||||| |||||    
T  3268523 tttctgaacgaataaaagtgtgtgcaagagtctatatatatagtacatcattacttagggtttaagagatgaaa 3268596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 355 - 440
Target Start/End: Original strand, 21545705 - 21545790
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtcc 440  Q
    |||||||||  || ||||||||||||| |  |||||||||||||| || ||||||| |||||||||||||||||||| ||||||||    
T  21545705 ttttcttcactttttattgtcttcaaatactttctaagaaccattgatcttcaatcttcatatccttgatccttcacgtgatgtcc 21545790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 29544756 - 29544672
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  |||||||||||||||||| |||||||||| |||| || ||||||| ||||||| |||||||||||  |||||||    
T  29544756 ttttcttcactttgtattgtcttcaaaaaccttctaagaatcattgatcttcaatcttcatatctttgatccttcatgtgatgtc 29544672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 369 - 425
Target Start/End: Original strand, 12358655 - 12358711
Alignment:
Q  369 tattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatc 425  Q
    ||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  12358655 tattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcatatccttgatc 12358711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 20017189 - 20017106
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  ||||||||||||||| || ||||||||||||||| | |||||||| |||||| ||| ||||||||| |||||||    
T  20017189 ttttcttcactttgtattgtcttcaagaaccttctaagaaccattga-gttcaatcttcatatgcttaatccttcacatgatgtc 20017106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 23125137 - 23125053
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  |||||||||||| || |||||| ||||||||||| |  ||||||| ||||||||| |||||||||| |||||||    
T  23125137 ttttcttcactttgtattgtctttaagaatcttataagaaccattgaacttcaatcttcatatcctcgatccttcacatgatgtc 23125053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 9552747 - 9552676
Alignment:
Q  4 ataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttg 75  Q
    ||||||||||||||||||||||| |||||||||| | | ||||||| ||| | ||| |||||||||||||||    
T  9552747 ataccctagagagaacaagaggatgatggagatcctcttccttgaagctcttgatgcttgacccttgccttg 9552676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 9801146 - 9801072
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttg 75  Q
    |||| |||||||||||||||||||||||||||||||| | | |||| || ||| | ||| |||||||||||||||    
T  9801146 aacacaccctagagagaacaagaggaggatggagatcctcttccttaaagctcttgatgcttgacccttgccttg 9801072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 4829347 - 4829239
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag-gtgaaaatttgggttttccactaaaaacaac 196  Q
    ||||| |||||||||||   |||||| |||||||| || |||||  || | ||||||||||||||||| ||||||||   | |||||||| |||||||||    
T  4829347 tttctaaatgaataaaataatgtgcatgagtctctattcatagtggatgactacttaggggttaagagagtgaaaatagagtttttccaccaaaaacaac 4829248  T
Q  197 ttggaaaac 205  Q
    |||||||||    
T  4829247 ttggaaaac 4829239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 4092004 - 4092091
Alignment:
Q  8 cctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatg 95  Q
    ||||||||||||||||||| |||||||||| | | ||||| |||  || ||| ||||||||||||||  ||| |||||||||| ||||    
T  4092004 cctagagagaacaagaggaagatggagatcctctgccttggaacctctgatgcttgacccttgccttcaaccgctagctttctgaatg 4092091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 430
Target Start/End: Original strand, 20470688 - 20470763
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 430  Q
    |||||||||| ||||||||||||||| || ||||||||||||||| |  ||||||  ||| |||||||||| ||||    
T  20470688 ttttcttcattttgtattgtcttcaagaaccttctaagaaccattgaacttcaatattcacatccttgatcgttca 20470763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 9760704 - 9760630
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttg 75  Q
    |||||||| |||||||||||| ||||||||||||||| | | ||||||| ||| | ||| |||||||||| ||||    
T  9760704 aacataccttagagagaacaataggaggatggagatcctcttccttgaagctcttgatggttgacccttgtcttg 9760630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 7494932 - 7494849
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  ||||||||||||||   | ||||||||||||||| |  ||||||| |||||||||||||||||||  |||||||    
T  7494932 ttttcttcactttgtattgtcttcatggaccttctaagaaccattaac-ttcaatcttcatatccttgatccttcatgtgatgtc 7494849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 438
Target Start/End: Original strand, 9801764 - 9801835
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 438  Q
    ||||||| |||| ||||| ||| ||||||||||| |  ||||||| |||||||||||||||||||| ||||||    
T  9801764 ttgtattttctttaaaaaccttttaagaaccattgac-ttcaatcttcatatccttgatccttcacatgatgt 9801835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 21545447 - 21545523
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatt 174  Q
    |||||||| |||||| |||||||| | | |||||| ||||||| | || |||||||||||||||||||  |||||||    
T  21545447 tttctgaaagaataataatgtgtgtacgggtctctatttatagaaaatgattacttaggggttaagagaagaaaatt 21545523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 3400344 - 3400277
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    ||||| ||||||||| |||| |||||||||||||| ||||||| | || | ||||||||| |||||||    
T  3400344 tttctaaatgaataagaatgcgtgcaagagtctctatttatagcatatgactacttagggtttaagag 3400277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 14649722 - 14649663
Alignment:
Q  365 cttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgat 424  Q
    ||||||||||||||||||| ||||||| ||||||| || |||| |  |||||||||||||    
T  14649722 cttgtattgtcttcaaaaaccttctaataaccattgatcttcattattcatatccttgat 14649663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 439
Target Start/End: Original strand, 20461575 - 20461610
Alignment:
Q  404 ttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||| ||||||||||||||||||||||||||||    
T  20461575 ttcaatcttcatatccttgatccttcacttgatgtc 20461610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 24596591 - 24596706
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaaga-ggtgaaaatttgggttttccactaaaaacaac 196  Q
    |||||||||||||||||  ||||||||  |||||| |||||| | ||| ||||  || |||||||||  ||||||||  | ||||||||| |||||   |    
T  24596591 tttctgaatgaataaaagagtgtgcaatggtctctatttataatgcatgattatatacgggttaagatagtgaaaataggagttttccaccaaaaatggc 24596690  T
Q  197 ttggaaaacaagcaaa 212  Q
    ||||||||||||||||    
T  24596691 ttggaaaacaagcaaa 24596706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 22334795 - 22334884
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactcctt-atgtttgacccttgccttgtaccactagctttct 90  Q
    |||||| | |||| ||| ||||||||| ||||||||| | | ||| |||| | ||| ||| ||||||||||||||||||||||||||||||    
T  22334795 aacatatcttagaaagaccaagaggagaatggagatcctctgcct-gaaagttcttgatgcttgacccttgccttgtaccactagctttct 22334884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 1074934 - 1074889
Alignment:
Q  177 ggttttccact-aaaaacaacttggaaaacaagcaaaagtcacctc 221  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  1074934 ggttttccactgaaaaacatcttggaaaacaagcaaaagacacctc 1074889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 439
Target Start/End: Original strand, 9761313 - 9761377
Alignment:
Q  374 tcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||| ||||| ||| ||||||||||| |  ||||||| |||||||||||||||||||| |||||||    
T  9761313 tctttaaaaaccttttaagaaccattgac-ttcaatcttcatatccttgatccttcacgtgatgtc 9761377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 439
Target Start/End: Complemental strand, 20446427 - 20446355
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||||||||| || |||||||||||| || || |||||| ||   ||| ||||||||||||||||||||    
T  20446427 ttgtattgtcttcaacaaccttctaagaacccttgatcttcaattct-tcatctttgatccttcacttgatgtc 20446355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17880453 - 17880489
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatc 37  Q
    |||||||| |||||||||||| |||||||||||||||    
T  17880453 aacataccatagagagaacaataggaggatggagatc 17880489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 6e-41; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 18235822 - 18236015
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatgctttt 100  Q
    |||||||| ||||||||| |||| ||||||||||||| | | |||| || ||| | ||| ||||||||| ||||||||| ||||||||||  ||||||||    
T  18235822 aacataccatagagagaataagaagaggatggagatcctcttccttaaatctcttgatgcttgacccttaccttgtaccgctagctttctgtatgctttt 18235921  T
Q  101 ctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatttgggttttccactaaaaaca 194  Q
    || ||||||||||| ||||| ||||||||||| | |||| | ||||||||||||||||||||||| | |||||| || ||||||||||| ||||    
T  18235922 ctaaatgaataaaagtgtgtacaagagtctctatctataatgcatcattacttaggggttaagagataaaaattaggattttccactaataaca 18236015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 365 - 431
Target Start/End: Complemental strand, 17152380 - 17152314
Alignment:
Q  365 cttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcac 431  Q
    |||||||| |||||||||| ||||||||||||||| || |||| || ||||||||||||||||||||    
T  17152380 cttgtattatcttcaaaaaccttctaagaaccattcatattcattcttcatatccttgatccttcac 17152314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 39732177 - 39732119
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttagg 156  Q
    ||||||||||||||||| |||||| |||||||||| |||||||| ||||||||||||||    
T  39732177 tttctgaatgaataaaagtgtgtgaaagagtctctatttatagtgcatcattacttagg 39732119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 24047853 - 24047777
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatt 174  Q
    ||||| ||||||||| | ||||||||||| ||||| |||||||| ||||||||||||||| ||||||| ||| ||||    
T  24047853 tttctcaatgaataagagtgtgtgcaagaatctctatttatagtgcatcattacttagggtttaagagatgagaatt 24047777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 17862907 - 17862832
Alignment:
Q  99 ttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatt 174  Q
    |||||||||||||||| ||||||||| ||||| | |||||||| |||||||||||| || ||||||  ||||||||    
T  17862907 ttctgaatgaataaaagtgtgtgcaaaagtctatatttatagtgcatcattacttaaggtttaagaaatgaaaatt 17862832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 27917557 - 27917627
Alignment:
Q  25 gaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatg 95  Q
    ||||||||||||| | |||| |||| ||||| ||| ||||||||||||||||||| |||||||||| ||||    
T  27917557 gaggatggagatcctctaccatgaagctcctgatgcttgacccttgccttgtaccgctagctttctgaatg 27917627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 9504517 - 9504430
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttct 90  Q
    ||||||||||||||||||||||||||||||||||||| | | |||||  ||| || ||||||||||| ||||||| ||| ||| ||||||    
T  9504517 aacataccctagagagaacaagaggaggatggagatcctcttccttg-gact-ctgatgtttgacccctgccttgaaccgctatctttct 9504430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 9515883 - 9515796
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttct 90  Q
    ||||||||||||||||||||||||||||||||||||| | | |||||  ||| || ||||||||||| ||||||| ||| ||| ||||||    
T  9515883 aacataccctagagagaacaagaggaggatggagatcctcttccttg-gact-ctgatgtttgacccctgccttgaaccgctatctttct 9515796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 18236181 - 18236225
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatt 399  Q
    |||||||||||||||||||||||||| || |||||||||||||||    
T  18236181 ttttcttcatcttgtattgtcttcaacaaccttctaagaaccatt 18236225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 18819199 - 18819115
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatttgggtttt 182  Q
    ||||||||| |||||||  || |||||| |||||| |||||| |||||||||||||||| ||||||||  ||||| ||| |||||    
T  18819199 tttctgaataaataaaagagtttgcaagggtctctatttataatacatcattacttaggagttaagagaagaaaaattgagtttt 18819115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 21505017 - 21505101
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||  | ||||| | ||| |||||||||| ||||  |||||||    
T  21505017 ttttcttcaacttgtattgtcttcaaaaaccttctcagaaccattggtcttcaaacttcacatccttgatctttcatgtgatgtc 21505101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 155
Target Start/End: Original strand, 21848066 - 21848121
Alignment:
Q  100 tctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttag 155  Q
    ||||||||||||||| ||||||||||||||||| |||||  || ||||||||||||    
T  21848066 tctgaatgaataaaagtgtgtgcaagagtctctatttatcctatatcattacttag 21848121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 15454096 - 15454169
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaa 172  Q
    ||||| ||||||||||  |||||||||| |||||  |||||||| ||||||||||||||| ||||||| ||||||    
T  15454096 tttctaaatgaataaag-tgtgtgcaagggtctcgatttatagttcatcattacttagggtttaagagatgaaaa 15454169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 436
Target Start/End: Complemental strand, 30998996 - 30998927
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgat 436  Q
    ||||||||||||||| || |||||||||||| || || ||||||   ||||||||||||||||||||||||    
T  30998996 ttgtattgtcttcaacaaccttctaagaacccttgatcttcaatta-catatccttgatccttcacttgat 30998927  T

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Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 425
Target Start/End: Complemental strand, 31262233 - 31262163
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatc 425  Q
    ||||||||| ||| ||||||||||||| | || |||||||||||| || ||||||| ||||||||| ||||    
T  31262233 ttttcttcaacttatattgtcttcaaagacctactaagaaccattaatcttcaatcttcatatcctcgatc 31262163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 31262479 - 31262413
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaaga 164  Q
    ||||| |||||||||||  |||| |||| |||||| |||||||| |||||||||||||||| |||||    
T  31262479 tttctaaatgaataaaagagtgtacaagtgtctctatttatagtgcatcattacttaggggataaga 31262413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 438
Target Start/End: Original strand, 14921916 - 14922000
Alignment:
Q  354 tttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 438  Q
    ||||||||||  ||||||||||| || | | ||||||||||||||| |  ||||||| ||||||||| ||| |||||| ||||||    
T  14921916 tttttcttcactttgtattgtctacatataccttctaagaaccattgaacttcaatcttcatatcctcgattcttcacatgatgt 14922000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 12363621 - 12363574
Alignment:
Q  110 taaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggg 157  Q
    ||||| |||||||||||||||||||||||| |  ||||||||||||||    
T  12363621 taaaagtgtgtgcaagagtctctgtttatattgaatcattacttaggg 12363574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 14921599 - 14921691
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatg 95  Q
    ||||||||||||||||||||| || ||||||  |||| | | ||||||||||| | ||| |||||| ||||||| |||| ||||| |||| ||||    
T  14921599 aacataccctagagagaacaatagaaggatg--gatcctctgccttgaaactcgtgatgattgacctttgccttttaccgctagccttctgaatg 14921691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 17884075 - 17884168
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatg 95  Q
    ||||||||||||| || ||||||||| ||  || ||| | | ||||||| ||| | ||| |||||||||||||||||| ||||||||||| ||||    
T  17884075 aacataccctagaaaggacaagaggatgacagaaatcctctgccttgaatctc-tgatgcttgacccttgccttgtactactagctttctaaatg 17884168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 431
Target Start/End: Complemental strand, 18117208 - 18117142
Alignment:
Q  365 cttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcac 431  Q
    |||||| |||||| |||||| ||||||||||||||||| |||| |  ||||||||| ||| ||||||    
T  18117208 cttgtactgtcttaaaaaatattctaagaaccatttatcttcatttttcatatcctcgatgcttcac 18117142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 439
Target Start/End: Complemental strand, 19541239 - 19541189
Alignment:
Q  389 taagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||||  | ||||||| ||||||||| ||||||||||||||||||    
T  19541239 taagaaccattggtcttcaatcttcatatcctcgatccttcacttgatgtc 19541189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 31274192 - 31274138
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaat 409  Q
    ||||||||| ||| ||||||||||||| | ||||||||||||||| || ||||||    
T  31274192 ttttcttcaacttatattgtcttcaaagaccttctaagaaccattaatcttcaat 31274138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 13802172 - 13802107
Alignment:
Q  97 ttttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaa 162  Q
    |||||||||||||||||| | ||| ||||| ||||| ||||||||| || ||| ||||||| ||||    
T  13802172 ttttctgaatgaataaaagtctgtacaagattctctatttatagtatataattgcttagggtttaa 13802107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 17414764 - 17414828
Alignment:
Q  100 tctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    |||||| ||||||||  ||||| |||| ||| | |||||||||||||||||||||| |||||||||    
T  17414764 tctgaaagaataaaagagtgtgtaaga-tctatatttatagtacatcattacttagaggttaagag 17414828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 420
Target Start/End: Complemental strand, 18818938 - 18818873
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatcct 420  Q
    |||||||||  |||||||||||||||| | ||||||||||||||| || |||| |  |||||||||    
T  18818938 ttttcttcactttgtattgtcttcaaagaccttctaagaaccattaatcttcagttttcatatcct 18818873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 22511470 - 22511401
Alignment:
Q  11 agagagaacaagaggaggatggagatcttataccttgaaactccttatg-tttgacccttgccttgtacc 79  Q
    |||| |||||||| ||||||||||||| | ||||| ||| ||||| ||| ||||||||||||||| ||||    
T  22511470 agagtgaacaagaagaggatggagatcctctacctggaagctcctgatgttttgacccttgccttatacc 22511401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 439
Target Start/End: Original strand, 15454433 - 15454501
Alignment:
Q  371 ttgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||| | ||| ||| |||||||||||||| || | || |||||||||||||||||||  |||||||    
T  15454433 ttgtctttagaaaacttttaagaaccatttatctttattcttcatatccttgatccttcatgtgatgtc 15454501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 439
Target Start/End: Original strand, 17415058 - 17415125
Alignment:
Q  371 ttgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||||| | || |||||||||||| || ||||||| |||| |||| |||||||||| |||||||    
T  17415058 ttgtcttcaaataactcctaagaaccattgat-ttcaatcttcatgtcctcgatccttcacgtgatgtc 17415125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 22511182 - 22511098
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||| | |||||||||||||||| | |||| ||| |||| |   |||||| |||||||||  ||| |||||||||||||    
T  22511182 ttttcttcatttcgtattgtcttcaaaaaccatctatgaatcattgaacatcaatcttcatatcctcaatctttcacttgatgtc 22511098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 27417141 - 27417225
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  ||||||||| |||||||| ||||| |||||||||  | |||||   ||||||| |||||||||||  |||||||    
T  27417141 ttttcttcactttgtattgttttcaaaaaccttcttagaaccattggtcttcaacattcatatcattgatccttcatgtgatgtc 27417225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 29438026 - 29437815
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatgctttt 100  Q
    ||||||||||||||| |||||||| | |||||||||| |   ||||||| ||| | ||| ||||||||||||||||||||||||            ||||    
T  29438026 aacataccctagagataacaagagaatgatggagatcctcgtccttgaagctcttaatgcttgacccttgccttgtaccactag------------tttt 29437939  T
Q  101 ctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag-gtgaaaatttgggttttccactaaaaacaacttg 199  Q
    ||||||||||| ||  |||||||||||||||| |||||||| ||| ||||||||||||||||||| ||||||||  || |||||||| ||||||  ||||    
T  29437938 ctgaatgaatacaagagtgtgcaagagtctctatttatagtgcatgattacttaggggttaagagagtgaaaatagggtttttccaccaaaaacggcttg 29437839  T
Q  200 gaaaacaagcaaaagtcacctcct 223  Q
    ||||||||||||| ||||| ||||    
T  29437838 gaaaacaagcaaacgtcacttcct 29437815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 98 - 254
Target Start/End: Original strand, 7023823 - 7023979
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatttgggttttccactaaaaacaact 197  Q
    ||||| |||||||||||  ||||||||  |||||| ||| |||| ||||| | | |||||||| |||| ||||| || || |||||||||||||| | ||    
T  7023823 tttctcaatgaataaaagcgtgtgcaatggtctctatttttagtgcatcactgcataggggtttagagatgaaatttaggattttccactaaaaatagct 7023922  T
Q  198 tggaaaacaagcaaaagtcacctcctgtctgtcaaccaagtgtggggcgcatgaagt 254  Q
    ||||||||||||||||| ||||||||| | |||  ||| ||| |||| |||||||||    
T  7023923 tggaaaacaagcaaaaggcacctcctggccgtctgccatgtgcggggtgcatgaagt 7023979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 7024097 - 7024181
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||  | ||||||| ||||||| |||||||||||| |||||||    
T  7024097 ttttcttcatcttgtattatcttcaagaatcttctaagaaccattggtcttcaatcttcatatctttgatccttcacgtgatgtc 7024181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 5676436 - 5676352
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||| | ||||| | | |||||||||||||||||  |||||||    
T  5676436 ttttcttcatcttgtattgtcttcaaaaaccttctaagaatcatttgtattcaaacttaatatccttgatccttcatgtgatgtc 5676352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 98 - 211
Target Start/End: Complemental strand, 23354107 - 23353994
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaa-aatttgggttttccactaaaaacaac 196  Q
    |||||||||||||||||  || ||| ||||||| | |||||| |||||||||||||||||||||||||  ||| |||  || ||||| ||| ||||||||    
T  23354107 tttctgaatgaataaaagagtttgcgagagtctttatttataatacatcattacttaggggttaagagaagaagaataaggtttttcaact-aaaacaac 23354009  T
Q  197 ttggaaaacaagcaa 211  Q
    ||| |||||||||||    
T  23354008 ttgaaaaacaagcaa 23353994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 22120182 - 22120082
Alignment:
Q  99 ttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtg-aaaatttgggttttccactaaaaacaact 197  Q
    |||||||||||||||  |||||||||| |||||| |||   ||||||||||||||||||||||||||  | |||| | | |||||||||| |||||||||    
T  22120182 ttctgaatgaataaatgtgtgtgcaagggtctctattttgggtacatcattacttaggggttaagagaagaaaaactagagttttccactgaaaacaact 22120083  T
Q  198 t 198  Q
    |    
T  22120082 t 22120082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 431
Target Start/End: Original strand, 31859779 - 31859855
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcac 431  Q
    |||||||||  |||||||||||||||| | ||||||||||||||| || ||||||  ||||||||| ||||||||||    
T  31859779 ttttcttcactttgtattgtcttcaaataccttctaagaaccattgatcttcaatattcatatcctcgatccttcac 31859855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 34864174 - 34864257
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||| |  |||||||  |||||| |||||||||||| |||||||    
T  34864174 ttttcttcattttgtattgtctacaaaaaccttctaagaaccattga-cttcaatctccatatctttgatccttcacgtgatgtc 34864257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 26160333 - 26160266
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    |||||||||||||||||  |||||||||||||||| |||||||  ||| |||||||| ||||||||||    
T  26160333 tttctgaatgaataaaagagtgtgcaagagtctctatttatagggcataattacttatgggttaagag 26160266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 31859476 - 31859545
Alignment:
Q  97 ttttctgaatgaataaaaatgtgtgcaagagtctctgtttat-agtacatcattacttaggggttaagag 165  Q
    ||||||||||||||||||  ||||||||| ||||||  |||| ||| |||||||||||||||||||||||    
T  31859476 ttttctgaatgaataaaagagtgtgcaagggtctctacttataagtgcatcattacttaggggttaagag 31859545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 420
Target Start/End: Complemental strand, 33519266 - 33519201
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatcct 420  Q
    ||||||||| ||||||||||||||||| | ||||||||||| ||| || ||||||| |||||||||    
T  33519266 ttttcttcaacttgtattgtcttcaaagaccttctaagaacgattgatcttcaatcgtcatatcct 33519201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 388 - 439
Target Start/End: Complemental strand, 9288413 - 9288362
Alignment:
Q  388 ctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||||||  | ||||||| ||||||||||||||||||||||||||||    
T  9288413 ctaagaaccattggtcttcaatcttcatatccttgatccttcacttgatgtc 9288362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 153
Target Start/End: Original strand, 12028484 - 12028539
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattactt 153  Q
    |||||||||||||||||  |||||||||||||||| |||||||| |||| ||||||    
T  12028484 tttctgaatgaataaaagagtgtgcaagagtctctatttatagtgcatctttactt 12028539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 13066336 - 13066241
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactcctt-atgtttgacccttgccttgtaccactagctttctcaatg 95  Q
    ||||||||||||| ||||||| | ||||||||||||| ||| |||||||  ||||| || |||||| |||||||| |||| ||| |||||| ||||    
T  13066336 aacataccctagaaagaacaaaacgaggatggagatcctatgccttgaagatccttgatatttgactcttgccttataccgctaactttctgaatg 13066241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 19602380 - 19602200
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatgctttt 100  Q
    |||||||||| |||| ||||| |||| ||| || ||| | | ||||||| ||||| ||| ||| ||||||||||||||| |||||            |||    
T  19602380 aacataccctcgagataacaaaaggatgatagaaatcctctgccttgaagctcctgatgcttggcccttgccttgtaccgctagc------------ttt 19602293  T
Q  101 ctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag-gtgaaaatttgggttttccactaaaaa 192  Q
    ||||||||| ||||  |||| |||| |||||| |||||| | ||| ||||||| ||||||||||| ||||||||  ||||||||||| |||||    
T  19602292 ctgaatgaaaaaaagagtgtacaagggtctctatttataatgcatgattacttcggggttaagagagtgaaaataggggttttccaccaaaaa 19602200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 21077786 - 21077680
Alignment:
Q  102 tgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatttgg-gttttccactaaaaacaacttgg 200  Q
    ||||||||||| |  |||  |||| |||||| ||||||||| ||||||||||||||||||||||  ||||||| ||  ||||||| |||||||||||||     
T  21077786 tgaatgaataagatagtggacaagggtctctatttatagtagatcattacttaggggttaagagaagaaaattgggcattttcca-taaaaacaacttga 21077688  T
Q  201 aaaacaag 208  Q
    | ||||||    
T  21077687 ataacaag 21077680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 22119843 - 22119776
Alignment:
Q  369 tattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgat 436  Q
    ||||||| ||||||| | ||||||||||||| || ||||||  |||||||||| ||||||||||||||    
T  22119843 tattgtcctcaaaaaccctctaagaaccattgatcttcaatattcatatccttaatccttcacttgat 22119776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 33519551 - 33519488
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggtta 161  Q
    |||||||||||||||||  ||||||||| |||| | ||||||||| ||||||| ||||||||||    
T  33519551 tttctgaatgaataaaagagtgtgcaagggtctttatttatagtatatcattaattaggggtta 33519488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 439
Target Start/End: Complemental strand, 13064647 - 13064578
Alignment:
Q  370 attgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||||| | | ||||||||||||| |  ||||||| || ||||||||||||||||| |||||||    
T  13064647 attgtcttcaaataccctctaagaaccattgaacttcaatcgtcttatccttgatccttcacgtgatgtc 13064578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 439
Target Start/End: Complemental strand, 15192424 - 15192356
Alignment:
Q  370 attgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||||| || |||||||||||||||  | ||||||  |||||||||||||||||||| |||||||    
T  15192424 attgtcttcaacaaccttctaagaaccattggtcttcaatt-tcatatccttgatccttcacgtgatgtc 15192356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 438
Target Start/End: Complemental strand, 17187398 - 17187326
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 438  Q
    |||||||||||||||| | ||||||||||||| | |  ||||||| |||||||||  ||| ||||||||||||    
T  17187398 ttgtattgtcttcaaataacttctaagaaccactgaacttcaatcttcatatcctcaatcattcacttgatgt 17187326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 27303013 - 27302930
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  || || |||||||||||| |||||||||||| || |||||||||  |||||||||||||| | ||| |||||||    
T  27303013 ttttcttcactttataatgtcttcaaaaaccttctaagaacccttaatgttcaat-ttcatatccttgatcttgcacgtgatgtc 27302930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 430
Target Start/End: Original strand, 25315118 - 25315184
Alignment:
Q  363 atcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 430  Q
    |||||||||||||||||| ||  || |||||||||||||| || |||  |||||||||||||||||||    
T  25315118 atcttgtattgtcttcaacaacattttaagaaccatttatctttaat-ttcatatccttgatccttca 25315184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 439
Target Start/End: Complemental strand, 29437678 - 29437623
Alignment:
Q  384 tcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||||||||| |  ||||||| ||||||||| |||||||||| |||||||    
T  29437678 tcttctaagaaccattgaacttcaatcttcatatcctcgatccttcacgtgatgtc 29437623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 4733223 - 4733157
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaaga 164  Q
    ||||||| |||||||||  |||| |||| || ||| ||||||||||||||||| ||||| |||||||    
T  4733223 tttctgattgaataaaacagtgtccaagggtttctatttatagtacatcattatttaggtgttaaga 4733157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 10079756 - 10079798
Alignment:
Q  97 ttttctgaatgaataaaaatgtgtgcaagagtctctgtttata 139  Q
    |||||||||||||||||| |||||||||| || ||||||||||    
T  10079756 ttttctgaatgaataaaagtgtgtgcaagcgtgtctgtttata 10079798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 17184165 - 17184223
Alignment:
Q  24 ggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccact 82  Q
    ||||||| |||||| | | ||||||| ||||| |||||||||| |||||||||||||||    
T  17184165 ggaggatagagatcctctgccttgaagctcctgatgtttgacctttgccttgtaccact 17184223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 439
Target Start/End: Complemental strand, 19602020 - 19601951
Alignment:
Q  369 tattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||||||||| ||| ||||||||| || | ||||||| ||||||||| |||| ||||| |||||||    
T  19602020 tattgtcttcaaaaaccttttaagaacca-ttgtcttcaatcatcatatcctcgatctttcacgtgatgtc 19601951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 26160410 - 26160329
Alignment:
Q  8 cctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttct 90  Q
    |||||||||||||||||||||||| ||||| | |  |||||| || |||||| | || ||||| |||||||| ||||||||||    
T  26160410 cctagagagaacaagaggaggatgtagatcatctgacttgaagct-cttatgctagatccttgtcttgtaccgctagctttct 26160329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 26188356 - 26188283
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttg 75  Q
    ||||||||||| ||||||||||||||||||| ||||| | | ||||| |||| || ||| ||||| |||||||||    
T  26188356 aacataccctatagagaacaagaggaggatgaagatcctctgccttggaact-ctgatgcttgactcttgccttg 26188283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 439
Target Start/End: Original strand, 1695736 - 1695808
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||||||||| || ||||||||||   ||||| ||||||| ||||||| |||||| ||||| |||||||    
T  1695736 ttgtattgtcttcaacaaccttctaagaatgttttat-ttcaatcttcatatcgttgatcattcacatgatgtc 1695808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 4733307 - 4733219
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttct 90  Q
    |||||||| |||| ||||||| | ||||||||||||| | | ||||||| || || | |||||||||||| ||||||| | |||||||||    
T  4733307 aacataccttagaaagaacaacaagaggatggagatcatctgccttgaagct-ctaacgtttgacccttgtcttgtactagtagctttct 4733219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 18444809 - 18444733
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtac 78  Q
    |||||||||||  |||||||||||||||||||||||| |   |||||||||| || ||  ||||||||| ||||||||    
T  18444809 aacataccctaatgagaacaagaggaggatggagatcctccgccttgaaact-ctgattcttgaccctttccttgtac 18444733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 439
Target Start/End: Complemental strand, 21077458 - 21077385
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||||||| |  | ||||||||||||||| || ||||||||||||| | | |||||| |||||| ||||    
T  21077458 ttgtattgtcttcgattaccttctaagaaccattgatattcaatcctcataacttcgatcctccacttggtgtc 21077385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 5676795 - 5676720
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgta 77  Q
    |||||||| |||| ||||||||||||||||| | ||  | |||||||||||| || ||| ||| |||||||||||||    
T  5676795 aacataccatagaaagaacaagaggaggatgaaaattatctaccttgaaact-ctgatgcttggcccttgccttgta 5676720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 5906652 - 5906716
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 430  Q
    ||||||| |||||||||| ||||||||||||||| || || |||| | |||| || |||||||||    
T  5906652 ttgtattatcttcaaaaaccttctaagaaccattaatcttaaatcttaatattctagatccttca 5906716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 10577062 - 10577026
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatc 37  Q
    |||||||||||||||| |||||||||||| |||||||    
T  10577062 aacataccctagagaggacaagaggaggagggagatc 10577026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 17026575 - 17026658
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  ||||||||||||||||||  || ||||||||| |||  || ||| ||||||| ||||||||||||  |||||||    
T  17026575 ttttcttcactttgtattgtcttcaaaaactttttaagaacca-ttaacttaaattctcatatacttgatccttcatgtgatgtc 17026658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 22344176 - 22344121
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattactta 154  Q
    |||||||||||| | || ||| ||||||||||||| ||||||| |||||||||||||    
T  22344176 tttctgaatgaaaataactgtatgcaagagtctctatttatag-acatcattactta 22344121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 34666300 - 34666248
Alignment:
Q  102 tgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattactta 154  Q
    ||||||||| ||||||| ||||||| ||||| |||||| | ||||||||||||    
T  34666300 tgaatgaatgaaaatgtttgcaagaatctctatttataatgcatcattactta 34666248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 47024655 - 47024718
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 430  Q
    ||||| ||| |||||||| ||||||||||||||| |  ||||||| |||| ||||||||||||||    
T  47024655 ttgtactgttttcaaaaaccttctaagaaccattga-cttcaatcttcatgtccttgatccttca 47024718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 8e-31; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 14184529 - 14184317
Alignment:
Q  11 agagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatgcttttctgaatgaat 110  Q
    |||||||| |||||||||||||||||||| ||||||||| ||| | ||| |||||| |||||||||| |  |||||| || ||||||||||||||| |||    
T  14184529 agagagaataagaggaggatggagatcttctaccttgaagctcttgatgcttgaccattgccttgtagcgttagcttgcttaatgcttttctgaatcaat 14184430  T
Q  111 aaaaatgtgtgcaagagtctctgtttatagtacatcattactta-ggggttaagaggtgaaaatttgggttttccact-aaaaacaacttggaaaacaag 208  Q
    |||| ||||||||||  ||||| ||||||| | || |||||||| |||||||||||    |||   || ||||||| | |||| || |||||||||||||    
T  14184429 aaaagtgtgtgcaaggttctctatttatagcagatgattacttagggggttaagagaaagaaaacaggattttccattgaaaagcagcttggaaaacaag 14184330  T
Q  209 caaaagtcacctc 221  Q
    |||||| ||||||    
T  14184329 caaaaggcacctc 14184317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 30850564 - 30850657
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatg 95  Q
    ||||||||||||||||||||| ||||||||||||||| | | |||| || ||| ||||||||||||||||||||||||| |||||||||| ||||    
T  30850564 aacataccctagagagaacaataggaggatggagatcctctgccttaaatctc-ttatgtttgacccttgccttgtaccgctagctttctgaatg 30850657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 439
Target Start/End: Original strand, 13583409 - 13583482
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||||||||| ||||||||||||||||| |  ||||||| ||||||||| ||||||||||||||||||    
T  13583409 ttgtattgtcttcaaatatcttctaagaaccattgaacttcaatcatcatatcctcgatccttcacttgatgtc 13583482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 11438003 - 11437909
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatg 95  Q
    ||||||||||| |||||||||||| |||||||||||| | | | ||||| ||| | ||| |||||||||||||||||| ||||||||||| ||||    
T  11438003 aacataccctacagagaacaagagaaggatggagatcctctgctttgaagctcatgatgcttgacccttgccttgtactactagctttctaaatg 11437909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 28291979 - 28292063
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||| |||||||||||||||| | ||||||||||||||| || ||||||| |||||||||  ||||||||  |||||||    
T  28291979 ttttcttcattttgtattgtcttcaaagaccttctaagaaccattaatcttcaatcttcatatcctcaatccttcatgtgatgtc 28292063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 27097551 - 27097639
Alignment:
Q  261 catggggcatcaaggaatgttgtctcatgcgcaggggcgcatgaggcagtgccttcaatgcgaattttgc-attttcatcccttttttga 349  Q
    |||||||||  |||||||||||||||||||||| ||| ||||||||||||||||  | ||||||||||||  |||||||| |||||||||    
T  27097551 catggggcagaaaggaatgttgtctcatgcgca-gggtgcatgaggcagtgcctctagtgcgaattttgcggttttcatctcttttttga 27097639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 16052155 - 16052239
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||| |||||||||||||||||| |||||||||| ||||  | || |||| |||||||||| ||||||||  |||||||    
T  16052155 ttttcttcattttgtattgtcttcaaaaaccttctaagaatcattggtctttaatcttcatatcctttatccttcatgtgatgtc 16052239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 208
Target Start/End: Complemental strand, 18771533 - 18771340
Alignment:
Q  4 ataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatgcttttctg 103  Q
    |||| ||||||||||||| | ||||||||||||| | ||||||||| ||||| ||| |||||| ||||||||||            || |||  |||||     
T  18771533 atactctagagagaacaaaatgaggatggagatcatctaccttgaagctcctgatgcttgaccattgccttgta------------tcgatggatttcta 18771446  T
Q  104 aatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag-gtgaaaatttgggttttccactaaaaacaacttggaa 202  Q
    |||||||||||  ||||||||| |||||| || | |||  || |||||| |||| ||||||| ||||||||  ||||||||||| |||||||  ||||||    
T  18771445 aatgaataaaagagtgtgcaagggtctctattaagagtgtatgattactgagggattaagagagtgaaaataggggttttccaccaaaaacatattggaa 18771346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 30544319 - 30544172
Alignment:
Q  17 aacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatgcttttctgaatgaataaaaat 116  Q
    ||||||||||||||| ||||| ||| ||||||| | |||  |||||||| ||||||||| |||||||||          ||||||| |||||||||||      
T  30544319 aacaagaggaggatgaagatcctatgccttgaagcgcctattgtttgactcttgccttgaaccactagc----------cttttctaaatgaataaaaga 30544230  T
Q  117 gtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag-gtgaaaat 173  Q
    ||||||||   ||||| ||||||||  || ||||||||||||||||||| ||||||||    
T  30544229 gtgtgcaatgatctctatttatagtgtatgattacttaggggttaagagagtgaaaat 30544172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 439
Target Start/End: Complemental strand, 11437644 - 11437571
Alignment:
Q  367 tgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatcc-ttcacttgatgtc 439  Q
    |||||||||||||||  |||||||||||||||| |  ||||||  ||||||||||||||| |||||||||||||    
T  11437644 tgtattgtcttcaaatgtcttctaagaaccattgaacttcaattttcatatccttgatcctttcacttgatgtc 11437571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 5153994 - 5153910
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||| ||||| || ||||||||||||||| |||| || || |||| || ||||||| ||||||||| |||||||||||| |||||    
T  5153994 ttttattcatgttatattgtcttcaaaaaccttccaataatcattgatcttcaatcttcatatcctcgatccttcactttatgtc 5153910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 5570018 - 5570062
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatt 399  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  5570018 ttttcttcatcttgtattgtctttaaaaagcttctaagaaccatt 5570062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 11310134 - 11310217
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  ||||||||| |||||||| |||||||||| |||| |  || |||| |||||||||||||||||||| |||||||    
T  11310134 ttttcttcactttgtattgttttcaaaaaccttctaagaatcattgac-ttaaatcttcatatccttgatccttcacatgatgtc 11310217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 29292453 - 29292369
Alignment:
Q  6 accctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttct 90  Q
    ||||||||||||||||||| | ||||  |||||| | ||||||| ||||| |||||||| | |||||||||||| ||| ||||||    
T  29292453 accctagagagaacaagagaatgatgctgatcttcttccttgaagctcctgatgtttgatcattgccttgtacctctaactttct 29292369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 30850978 - 30851062
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  ||||||| | |||||| |  ||||||||||| || || ||||||| ||||||||||||||||||||| ||||||    
T  30850978 ttttcttcactttgtattatattcaaagacattctaagaaccgttgatcttcaatcttcatatccttgatccttcactagatgtc 30851062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 437
Target Start/End: Original strand, 6888071 - 6888153
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatg 437  Q
    ||||||||| ||||||||||||||||| |  || ||||||||||| || ||||||| ||||||||| ||| || ||| |||||    
T  6888071 ttttcttcaacttgtattgtcttcaaagacattttaagaaccattgatcttcaatcttcatatcctcgatactgcacgtgatg 6888153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 24927366 - 24927448
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccacta 83  Q
    ||||||||||| |||||||||| |||||||| ||||| |  |||||||| |||||  ||||||||  |||||||| |||||||    
T  24927366 aacataccctaaagagaacaaggggaggatgaagatcctccaccttgaagctcctggtgtttgacatttgccttggaccacta 24927448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 430
Target Start/End: Original strand, 28859131 - 28859192
Alignment:
Q  369 tattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 430  Q
    ||||||||||||||| | ||||||||||||| || || |||| | |||||||||||||||||    
T  28859131 tattgtcttcaaaaaccatctaagaaccattgatctttaatcttgatatccttgatccttca 28859192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 24120460 - 24120376
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||||||| |||| ||||| |||| |||||||||| ||||  | |||||   | |||||||||||||||||| |||||||    
T  24120460 ttttcttcatcttttattatcttcgaaaaccttctaagaaacattggtattcaaaattaatatccttgatccttcacatgatgtc 24120376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 438
Target Start/End: Original strand, 13081813 - 13081895
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 438  Q
    |||||||||| ||||||||||||||| || |||||||||||| || || ||||||  |  |||| |||||||||||| ||||||    
T  13081813 ttttcttcattttgtattgtcttcaacaaccttctaagaacccttgatcttcaattat-ttatctttgatccttcacatgatgt 13081895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 24927455 - 24927517
Alignment:
Q  102 tgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    ||||||||||||| | |||||||| |||||| |||||| || || |||||||||||||||||||    
T  24927455 tgaatgaataaaatt-tgtgcaagggtctctatttatattagatgattacttaggggttaagag 24927517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 28075008 - 28074945
Alignment:
Q  99 ttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaa 162  Q
    ||||||||||||||||  |||| |||  |||||| |||||||| ||| ||||||||||||||||    
T  28075008 ttctgaatgaataaaatagtgtacaaaggtctctatttatagtgcataattacttaggggttaa 28074945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 428
Target Start/End: Complemental strand, 24696807 - 24696745
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatcctt 428  Q
    ||||||| |||||||||| ||||||||||| | |  | ||||||| |||||||||||||||||    
T  24696807 ttgtattttcttcaaaaaccttctaagaacaagtggtcttcaatcttcatatccttgatcctt 24696745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 6887810 - 6887866
Alignment:
Q  108 aataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    ||||||||| | |||||| |||||| |||||||| ||||||||||||| |||||||||    
T  6887810 aataaaaatttctgcaag-gtctctatttatagtgcatcattacttagaggttaagag 6887866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 436
Target Start/End: Complemental strand, 29291990 - 29291925
Alignment:
Q  371 ttgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgat 436  Q
    ||||||||||| | ||||||||||||||| || ||||||  ||||||||| ||| |||||| ||||    
T  29291990 ttgtcttcaaagaccttctaagaaccattgatcttcaatattcatatcctcgattcttcacgtgat 29291925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 5569765 - 5569832
Alignment:
Q  97 ttttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    |||||||||||||||||| |||||| ||| |||||| ||||||  | || ||||||||||| |||||||    
T  5569765 ttttctgaatgaataaaagtgtgtg-aagggtctctatttataacaaatgattacttagggtttaagag 5569832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 14424691 - 14424775
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  ||| ||||| |||||||| ||||||||||||||| || ||||||| || |||| |  ||||||| |||| ||||    
T  14424691 ttttcttcacattgaattgtgttcaaaaaccttctaagaaccattgatcttcaatcttcttatcatatatccttcccttgttgtc 14424775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24094760 - 24094676
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagcttt 88  Q
    ||||||| ||||| | |||||||||||||| |||||  | | ||||||||||  | ||||||||||||||||||| ||||||| ||||    
T  24094760 aacatactctagacaaaacaagaggaggatagagat--tctgccttgaaactt-tgatgtttgacccttgccttgaaccactaacttt 24094676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 27085170 - 27085222
Alignment:
Q  104 aatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttagg 156  Q
    |||||||||||  ||||||| | |||||| |||||||||||||| ||||||||    
T  27085170 aatgaataaaagagtgtgcaggggtctctatttatagtacatcactacttagg 27085222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 395
Target Start/End: Original strand, 27097680 - 27097720
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaac 395  Q
    ||||||||| ||||||||||||||||| | |||||||||||    
T  27097680 ttttcttcaacttgtattgtcttcaaagaccttctaagaac 27097720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 28901228 - 28901311
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  |||||||||||||| ||| ||| ||||||||||| |  ||||||| ||||||| ||||| |||||  |||||||    
T  28901228 ttttcttcactttgtattgtcttcagaaaccttataagaaccattga-attcaatcttcatatcattgattcttcatatgatgtc 28901311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 29292331 - 29292279
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcatta 150  Q
    |||||||||||||||||  ||||  |||||||||| |||||| ||||||||||    
T  29292331 tttctgaatgaataaaagagtgtataagagtctctatttataatacatcatta 29292279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 98 - 208
Target Start/End: Original strand, 23157380 - 23157492
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag-gtg-aaaatttgggttttccactaaaaacaa 195  Q
    |||||||||||||||||  ||||||||| |||||| |||||| | ||| ||||||||||||||||||| ||| ||||| ||||||||||||  ||||||     
T  23157380 tttctgaatgaataaaatagtgtgcaagggtctctttttataatgcatgattacttaggggttaagagagtgaaaaatatgggttttccacctaaaacag 23157479  T
Q  196 cttggaaaacaag 208  Q
    |||||||||||||    
T  23157480 cttggaaaacaag 23157492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 18178740 - 18178592
Alignment:
Q  4 ataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatgcttttctg 103  Q
    |||||||||||||||||||||||||||| ||||| |  ||||| || || || |||||||||| ||||||||||||| ||||            ||| ||    
T  18178740 ataccctagagagaacaagaggaggatgaagatcctccacctttaagct-ctgatgtttgaccattgccttgtaccattagc------------tttttg 18178654  T
Q  104 aatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    |||||||||||| ||||||||| |||||| || ||| | |||||||||||||||||||||||    
T  18178653 aatgaataaaaaagtgtgcaagggtctctattgatattgcatcattacttaggggttaagag 18178592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 439
Target Start/End: Original strand, 11274209 - 11274292
Alignment:
Q  356 tttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||| ||||||||||||||||||||| | |||||||||||||||  | ||||||| |||||||||||||||||||  |||||||    
T  11274209 tttcatcatcttgtattgtcttcaaagaccttctaagaaccattggtcttcaatcttcatatccttgatccttcatgtgatgtc 11274292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 18281725 - 18281816
Alignment:
Q  4 ataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatg 95  Q
    ||||||||||||||||||||||| ||||||| || | ||||||||| ||||| |||||||||  |||||||| ||  |||||||||| ||||    
T  18281725 ataccctagagagaacaagaggacgatggaggtcctctaccttgaagctcctgatgtttgacgtttgccttgcactgctagctttctgaatg 18281816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 19763406 - 19763488
Alignment:
Q  5 taccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagcttt 88  Q
    |||||| |||||||||||||||||||| ||||| | | ||||||| ||  | ||||||||||||||||||||||||||||||||    
T  19763406 tacccttgagagaacaagaggaggatgaagatcctctgccttgaagctt-tgatgtttgacccttgccttgtaccactagcttt 19763488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 20695149 - 20695088
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggt 159  Q
    ||||||||||||| |||| || ||||||||||||| ||||||||||||||||||||| ||||    
T  20695149 tttctgaatgaatgaaaaggtttgcaagagtctctatttatagtacatcattacttacgggt 20695088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22930568 - 22930492
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtac 78  Q
    |||||| |||||||| ||||| ||||||||||||||| | |||||| || || |||||||||||||||||||||||||    
T  22930568 aacataacctagagataacaaaaggaggatggagatcctctaccttaaagct-cttatgtttgacccttgccttgtac 22930492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 431
Target Start/End: Complemental strand, 24841989 - 24841914
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcac 431  Q
    |||||||||| |||| ||||||||||||  ||||||||||||||| |  |||||||| |||||||||||||||||||    
T  24841989 ttttcttcattttgtgttgtcttcaaaatccttctaagaaccattga-cttcaatccacatatccttgatccttcac 24841914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 17695051 - 17695114
Alignment:
Q  102 tgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    ||||||||||||| || |||||||| ||||| |||||||| ||||||||||||||| |||||||    
T  17695051 tgaatgaataaaagtgcgtgcaagactctctatttatagtgcatcattacttagggtttaagag 17695114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 439
Target Start/End: Complemental strand, 30072351 - 30072268
Alignment:
Q  356 tttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||  |||||||||||| ||||| ||| ||||||||||| || ||||||| ||||||| |||||||||||  |||||||    
T  30072351 tttcttcactttgtattgtctttaaaaaccttttaagaaccattaatcttcaatcttcatatctttgatccttcatgtgatgtc 30072268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 438
Target Start/End: Original strand, 7742747 - 7742831
Alignment:
Q  354 tttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 438  Q
    ||||||||||  |||||||||||||||| | ||||||||||||||| || |||| || ||||||| | ||| |||||| ||||||    
T  7742747 tttttcttcactttgtattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgt 7742831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 16634283 - 16634199
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||  | ||||| | ||||||  ||| |||||||| |||||||    
T  16634283 tttttttcatcttgtattttcttcaaaaaccttctaagaaccattggtcttcaaacttcatattattgttccttcacgtgatgtc 16634199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 26329948 - 26330031
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  |||||||||||| ||||| |||||||| |||||| |  ||||||| |||||||||||||||||||  |||||||    
T  26329948 ttttcttcactttgtattgtcttaaaaaaccttctaaggaccattga-cttcaatcttcatatccttgatccttcatgtgatgtc 26330031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 366 - 437
Target Start/End: Complemental strand, 19331735 - 19331664
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatg 437  Q
    ||||||||||||||||  |||||||| || |||| |  ||||||| ||||||||| ||||||||||||||||    
T  19331735 ttgtattgtcttcaaatgtcttctaaaaatcattgaatttcaatcttcatatcctcgatccttcacttgatg 19331664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 213
Target Start/End: Complemental strand, 24131148 - 24131034
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatttgggttttccactaaaaacaact 197  Q
    ||||| ||||| ||||  ||| || ||| |||||| |||||||| ||||||||| ||||| |||||||  || ||||||| ||||||||| |  | ||||    
T  24131148 tttctaaatgattaaaggtgtatgtaagggtctctatttatagttcatcattacatagggtttaagagacgataatttggcttttccactgatca-aact 24131050  T
Q  198 tggaaaacaagcaaaa 213  Q
    ||||||||||||||||    
T  24131049 tggaaaacaagcaaaa 24131034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 439
Target Start/End: Complemental strand, 26070700 - 26070626
Alignment:
Q  365 cttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||| |||||||||||||| ||| || |||||||  || ||||||| |||||||||||||||||||  |||||||    
T  26070700 cttgcattgtcttcaaaaaccttatacgaaccatagatcttcaatcttcatatccttgatccttcatgtgatgtc 26070626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 16622555 - 16622638
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  |||||||||||||||||  ||||||||||||| |  | ||||||| |||||||||| ||||||||  |||||||    
T  16622555 ttttcttcaatttgtattgtcttcaaaac-cttctaagaaccactggtcttcaatcttcatatccttaatccttcatgtgatgtc 16622638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 22643459 - 22643519
Alignment:
Q  4 ataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttga 64  Q
    ||||||||||||||||||||||| |||||| ||||| | ||||||| ||||  ||||||||    
T  22643459 ataccctagagagaacaagaggatgatggatatcttcttccttgaagctccggatgtttga 22643519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 212
Target Start/End: Complemental strand, 25368158 - 25368042
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattactta-ggggttaagag-gtgaaaatttgggttttccactaaaaacaa 195  Q
    ||||| |||||||||||  ||||||||  |||||| |||||||| ||| ||||| ||  |||||||||| ||||||||  ||||||||||| |||||       
T  25368158 tttctaaatgaataaaatagtgtgcaatggtctctatttatagtgcatgattacgtacagggttaagagagtgaaaataggggttttccaccaaaaatgg 25368059  T
Q  196 cttggaaaacaagcaaa 212  Q
    |||| ||||||||||||    
T  25368058 cttgaaaaacaagcaaa 25368042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 7742484 - 7742547
Alignment:
Q  102 tgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    ||||||| |||||  ||||||||| |||||| |||||| | ||||||| |||||||||||||||    
T  7742484 tgaatgattaaaagagtgtgcaagggtctctatttataatgcatcattgcttaggggttaagag 7742547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 17381516 - 17381551
Alignment:
Q  2 acataccctagagagaacaagaggaggatggagatc 37  Q
    |||||||||||||||||||| |||||||||||||||    
T  17381516 acataccctagagagaacaaaaggaggatggagatc 17381551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 439
Target Start/End: Complemental strand, 20694863 - 20694792
Alignment:
Q  368 gtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||||||| | |||||||||||||||||| ||||||| | || ||| | ||||||||  |||||||    
T  20694863 gtattgtcttcaaataccttctaagaaccatttatcttcaatcttaatgtccgttatccttcatatgatgtc 20694792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25594164 - 25594250
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagcttt 88  Q
    |||||| | |||||||||||||||||||||| ||| | | | ||||| | ||| | |||||| |||||||||||| ||||||||||||    
T  25594164 aacatatcttagagagaacaagaggaggatgaagaccctcttccttggagctc-tgatgtttaacccttgccttgaaccactagcttt 25594250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 22755483 - 22755442
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttata 139  Q
    |||||||||||||||||  |||||||||||||||| ||||||    
T  22755483 tttctgaatgaataaaatagtgtgcaagagtctctatttata 22755442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 17027763 - 17027680
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  ||||||||||||||| || |||||||||| || |||  ||||||| ||||||| |||||| | ||| |||||||    
T  17027763 ttttcttcactttgtattgtcttcaagaaccttctaagaagca-ttaacttcaatcttcatatctttgatcttgcacgtgatgtc 17027680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 18452420 - 18452500
Alignment:
Q  102 tgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatttgggtttt 182  Q
    ||||||||||| ||||||||||||||||||| |||| |  | || || ||||| || |||||||  |||||||||| ||||    
T  18452420 tgaatgaataataatgtgtgcaagagtctctatttacaacaaatgatcacttaaggtttaagagaagaaaatttggctttt 18452500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 18452690 - 18452774
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  ||||||||| || ||||| ||| ||||||||||| || ||||||  ||||||| ||||||| |||  |||||||    
T  18452690 ttttcttcactttgtattgttttaaaaaaccttataagaaccattgatcttcaattttcatatctttgatccctcatgtgatgtc 18452774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 22230040 - 22229957
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  | ||||| ||||||| || |||||||||||| || || |||||| | |||||| |||||||||||| |||||||    
T  22230040 ttttcttcacttggtattatcttcaacaaccttctaagaacccttgatcttcaattc-catatctttgatccttcacgtgatgtc 22229957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 24846656 - 24846600
Alignment:
Q  97 ttttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattactt 153  Q
    |||||||||||||||||| || |||||||||| ||| |||||||   ||||||||||    
T  24846656 ttttctgaatgaataaaagtgcgtgcaagagtgtctatttataggcaatcattactt 24846600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 25594570 - 25594654
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  ||| ||| ||| |||||| ||||||| | ||||| || ||||||| |||||||||||||| ||||  |||||||    
T  25594570 ttttcttcactttgcattatctacaaaaaccttctaatatccattgatattcaatcttcatatccttgatcgttcatgtgatgtc 25594654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 5e-20; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 11475376 - 11475290
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatttgggttttcc 184  Q
    |||||||||||||||||  |||||||||||||||| |||||| |||||||||||||||||||||| ||  ||||| | |||||||||    
T  11475376 tttctgaatgaataaaagagtgtgcaagagtctctatttatattacatcattacttaggggttaaaagaagaaaactagggttttcc 11475290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 439
Target Start/End: Original strand, 19219100 - 19219173
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||||||||||| ||||||||||||||| || ||||||| |||||||||||||||||||  |||||||    
T  19219100 ttgtattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcatatccttgatccttcatgtgatgtc 19219173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 16970698 - 16970614
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||||||||||| |||||||||| |||||||||||| ||  | ||||| | |||||||||||||||||||| |||||||    
T  16970698 ttttcttcatcttgtattttcttcaaaaaccttctaagaaccgttggtcttcaaacttcatatccttgatccttcacatgatgtc 16970614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 18474802 - 18474719
Alignment:
Q  6 accctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttc 89  Q
    ||||| ||||||| |||||||||||||||||  | | ||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  18474802 accctggagagaataagaggaggatggagatactctgccttgaaactcctgatgcttgacccttgccttgtacctctagctttc 18474719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 366 - 439
Target Start/End: Complemental strand, 11475072 - 11474999
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||||||||| |||||||||||||||||||| || |||||||||||| | |||||||||  |||||||    
T  11475072 ttgtattgtcttcaaatatcttctaagaaccatttatcttgaatcctcatatcttcgatccttcatgtgatgtc 11474999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 208
Target Start/End: Complemental strand, 26298372 - 26298186
Alignment:
Q  11 agagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatgcttttctgaatgaat 110  Q
    ||||| ||||||||||||||| ||||| | | ||||||| ||| | ||| |||||||||| |||||| ||||||||||||||||             |||    
T  26298372 agagacaacaagaggaggatgaagatcctcttccttgaagctcatgatgcttgacccttgacttgtagcactagctttctcaatt------------aat 26298285  T
Q  111 aaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag-gtgaaaatttgggttttccactaaaaacaacttggaaaacaag 208  Q
    ||||  |||||||||||||||| |||||| | ||| ||| ||||||||||||||| | ||||||  || |||| ||| ||||||| |||||||||||||    
T  26298284 aaaagagtgtgcaagagtctctatttataatgcatgattccttaggggttaagagagggaaaataaggttttttcaccaaaaacagcttggaaaacaag 26298186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 19542605 - 19542690
Alignment:
Q  4 ataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttc 89  Q
    |||||||||||||||||||||||||||||||||  | | |||| |||||  | ||| ||||||||||||||||||| | |||||||    
T  19542605 ataccctagagagaacaagaggaggatggagatactctgccttaaaacttataatgcttgacccttgccttgtacctcaagctttc 19542690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 438
Target Start/End: Complemental strand, 10342012 - 10341940
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 438  Q
    |||||||||||||||||| ||||||||||||| | || ||||||| |  ||||||| ||||||||||||||||    
T  10342012 ttgtattgtcttcaaaaaccttctaagaaccactgatcttcaatctttctatccttaatccttcacttgatgt 10341940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 10342357 - 10342208
Alignment:
Q  4 ataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatgcttttctg 103  Q
    |||||||||||||||||||||||||||||| ||| | | ||||||||   || |||||||||||| || ||| ||||||| |            ||||||    
T  10342357 ataccctagagagaacaagaggaggatggaaatcatctgccttgaaaactctgatgtttgaccctcgctttgaaccactaac------------tttctg 10342270  T
Q  104 aatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    ||| ||||| ||| ||||||||||||| | ||||||||| || ||||||||||| |||||||    
T  10342269 aattaataataatatgtgcaagagtctatatttatagtaaatgattacttagggtttaagag 10342208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 21828718 - 21828805
Alignment:
Q  7 ccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatg 95  Q
    |||||||||||||||||||| |||||||||| | | ||||||| || |||||| ||||||||||| |||| || |||||||||| ||||    
T  21828718 ccctagagagaacaagaggaagatggagatcctttgccttgaagct-cttatgcttgacccttgcattgtgccgctagctttctgaatg 21828805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 430
Target Start/End: Complemental strand, 13911480 - 13911419
Alignment:
Q  368 gtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 430  Q
    |||||||||| |||| ||||||||||||||||||  || |||| |||||||||||||||||||    
T  13911480 gtattgtcttgaaaattcttctaagaaccattta-atttaatcttcatatccttgatccttca 13911419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 19285684 - 19285607
Alignment:
Q  17 aacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatg 95  Q
    |||||| |||||||| ||||| | | ||||||| ||||  |||||||||||||||||||||||| ||||||||| ||||    
T  19285684 aacaagcggaggatgaagatcctctgccttgaagctccg-atgtttgacccttgccttgtaccattagctttctgaatg 19285607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 14280800 - 14280836
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatc 37  Q
    ||||||||||||||||||||||||||||||| |||||    
T  14280800 aacataccctagagagaacaagaggaggatgtagatc 14280836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 430
Target Start/End: Original strand, 19263782 - 19263860
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaat---cttctaagaaccatttatgttcaatcctcatatccttgatccttca 430  Q
    |||||||||  |||||||||||| |||||    |||||| |||||||| || ||||||| |||||||||||||||||||    
T  19263782 ttttcttcactttgtattgtcttaaaaaaaaaccttctatgaaccattgatcttcaatcttcatatccttgatccttca 19263860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 430
Target Start/End: Original strand, 23908160 - 23908224
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 430  Q
    ||||||||||||||||||  |||||| ||||||| || || |||| |||||| ||||||||||||    
T  23908160 ttgtattgtcttcaaaaactttctaaaaaccattgatcttaaatcttcatattcttgatccttca 23908224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 26418945 - 26418881
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 430  Q
    ||||||| |||| ||||| ||||||||||||||  || || |||| |||||||||||||||||||    
T  26418945 ttgtattttctttaaaaaccttctaagaaccatcaatctttaatcttcatatccttgatccttca 26418881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 22488379 - 22488414
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagat 36  Q
    |||||| |||||||||||||||||||||||||||||    
T  22488379 aacatatcctagagagaacaagaggaggatggagat 22488414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 33578276 - 33578209
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    ||||| ||||||||||| |||||||||| |||||| ||||||||  |||||||| ||  |||||||||    
T  33578276 tttctaaatgaataaaagtgtgtgcaagtgtctctatttatagtgtatcattacgtataggttaagag 33578209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 439
Target Start/End: Original strand, 21829025 - 21829095
Alignment:
Q  369 tattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||||||| | |||| | |||||||| || ||||||| ||||||||||||| |||||  |||||||    
T  21829025 tattgtcttcaaagaccttcgatgaaccattgatcttcaatcttcatatccttgatacttcatgtgatgtc 21829095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 439
Target Start/End: Original strand, 26387758 - 26387807
Alignment:
Q  390 aagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||| || ||||||  ||||||| ||||||||||||||||||||    
T  26387758 aagaaccattaatcttcaatattcatatctttgatccttcacttgatgtc 26387807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8401915 - 8401951
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatc 37  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  8401915 aacataccctagagataacaagaggaggatgaagatc 8401951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 16970958 - 16970890
Alignment:
Q  106 tgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatt 174  Q
    ||||||||| |||||| ||| |||||| ||||||| | || ||||||||||| |||||||  |||||||    
T  16970958 tgaataaaagtgtgtgtaagggtctctatttatagcatatgattacttagggtttaagagaagaaaatt 16970890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 19218708 - 19218740
Alignment:
Q  4 ataccctagagagaacaagaggaggatggagat 36  Q
    |||| ||||||||||||||||||||||||||||    
T  19218708 atactctagagagaacaagaggaggatggagat 19218740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 7e-19; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 26854198 - 26854282
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  |||||||||||||||| ||||||||||||||||| |  ||||||| ||||||| |||||||||||||| |||||    
T  26854198 ttttcttcactttgtattgtcttcaaatatcttctaagaaccattgaacttcaatcttcatatcattgatccttcacttaatgtc 26854282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 354 - 439
Target Start/End: Original strand, 18300880 - 18300965
Alignment:
Q  354 tttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||||   ||||||||||||||||| |||||||||||||||  | || |||| |||||||||||||||||||| |||||||    
T  18300880 tttttcttcactctgtattgtcttcaaaaaccttctaagaaccattggtatttaatcttcatatccttgatccttcacgtgatgtc 18300965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25778340 - 25778263
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtac 78  Q
    ||||||||||||||||||| ||||||||||||||||  | | ||||||| ||||  ||||||||||||||||||||||    
T  25778340 aacataccctagagagaacgagaggaggatggagatgctcttccttgaagctccagatgtttgacccttgccttgtac 25778263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 213
Target Start/End: Original strand, 52270740 - 52270940
Alignment:
Q  9 ctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatgcttttctgaatga 108  Q
    ||||||||||||||||||||||| ||||| | | || |||| ||||| ||| ||| ||||||||||||||| |||||||||| ||||  |    || ||     
T  52270740 ctagagagaacaagaggaggatgaagatcctttgccgtgaagctcctgatgcttggcccttgccttgtaccgctagctttctgaatgaataaaagattgt 52270839  T
Q  109 ataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag-gtgaaaatttgggttttccactaaaaacaacttggaaaacaa 207  Q
     ||| | ||     |||||||||| |||||| | ||| ||||||||||||||||||| ||||||||   | |||||||| |||||||||||| |||||||    
T  52270840 gtaacagtg-----aagagtctctatttatattgcatgattacttaggggttaagagagtgaaaatagagcttttccaccaaaaacaacttgaaaaacaa 52270934  T
Q  208 gcaaaa 213  Q
    | ||||    
T  52270935 gaaaaa 52270940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 355 - 438
Target Start/End: Complemental strand, 25373982 - 25373899
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 438  Q
    ||||||||||||||||||||||| || || |||||||||||||||  | || |||| ||||||||| ||||||||| |||||||    
T  25373982 ttttcttcatcttgtattgtcttaaacaaccttctaagaaccattggtctttaatcttcatatcctggatccttcaattgatgt 25373899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25665298 - 25665385
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagcttt 88  Q
    |||||| |||||||||||||||||||||||||||||| | | ||||||| ||| | ||| |||||||||| |||||||  ||||||||    
T  25665298 aacatatcctagagagaacaagaggaggatggagatcatctgccttgaagctcatgatgcttgacccttgtcttgtactgctagcttt 25665385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 50047691 - 50047605
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagcttt 88  Q
    |||||||||||||||||||||||||||||||||||||   | ||||| |||| || ||||||||||||||||||  ||| ||||||||    
T  50047691 aacataccctagagagaacaagaggaggatggagatccccttccttggaact-ctaatgtttgacccttgccttaaaccgctagcttt 50047605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21549253 - 21549176
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtac 78  Q
    ||||||||||||||||||||||||||||||||||||| | | |||||||  |||| ||| |||||| ||| |||||||    
T  21549253 aacataccctagagagaacaagaggaggatggagatcctctgccttgaagatcctgatgcttgaccattgacttgtac 21549176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 11769872 - 11769956
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  |||||||||||||||||| |||||||||||||||  | ||||||| ||||||| |||||| ||||  |||||||    
T  11769872 ttttcttcactttgtattgtcttcaaaaaccttctaagaaccattggtcttcaatcttcatatctttgatcattcatgtgatgtc 11769956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 26102293 - 26102209
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||| ||| ||||||||||||||||||| ||||||| || |||| || |||| || |||||||||||||| ||||| |||||||    
T  26102293 ttttcctcaacttgtattgtcttcaaaaaccttctaaaaatcattgatcttcattcttcatatccttgatcattcacgtgatgtc 26102209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 30675720 - 30675637
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  ||||||| |||||||||| ||||||||||||||| || ||||||| ||| || ||||||||||||| |||||||    
T  30675720 ttttcttcactttgtattatcttcaaaaaccttctaagaaccattgat-ttcaatcttcacattcttgatccttcacatgatgtc 30675637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 430
Target Start/End: Original strand, 25727788 - 25727862
Alignment:
Q  356 tttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 430  Q
    ||||||||  ||| |||||||||||||| |||| |||||||||| || ||||||| |||||||||| ||||||||    
T  25727788 tttcttcactttggattgtcttcaaaaaccttccaagaaccattgatcttcaatcttcatatccttaatccttca 25727862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 430
Target Start/End: Original strand, 25736196 - 25736270
Alignment:
Q  356 tttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 430  Q
    ||||||||  ||| |||||||||||||| |||| |||||||||| || ||||||| |||||||||| ||||||||    
T  25736196 tttcttcactttggattgtcttcaaaaaccttccaagaaccattgatcttcaatcttcatatccttaatccttca 25736270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25731081 - 25731004
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtac 78  Q
    |||||||||||||||||||  |||||||||| ||||| | | |||| || ||||| |||||| |||||||||||||||    
T  25731081 aacataccctagagagaacgggaggaggatgaagatcctcttcctttaagctcctgatgttttacccttgccttgtac 25731004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 50047411 - 50047330
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgat 436  Q
    |||||||||| ||||||||||||||| || ||| |||| |||||| || ||||||  ||||| |||||||||||||| ||||    
T  50047411 ttttcttcattttgtattgtcttcaataaccttttaagtaccattgatcttcaatattcatacccttgatccttcacgtgat 50047330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 15298502 - 15298581
Alignment:
Q  134 tttatagtacatcattacttaggggttaagaggtg-aaaatttgggttttccactaaaaacaacttggaaaacaagcaaaa 213  Q
    |||||| |||||||||||||||||||||||||  | ||||| ||||||||| ||  ||||||||||| |||||||||||||    
T  15298502 tttataatacatcattacttaggggttaagagaagaaaaatatgggttttcaac-caaaacaacttgaaaaacaagcaaaa 15298581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 27460471 - 27460539
Alignment:
Q  97 ttttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    ||||||||| ||||||||  ||||| ||| |||||| ||||||||  ||||||||||||||||||||||    
T  27460471 ttttctgaaagaataaaagagtgtgtaagggtctctatttatagtggatcattacttaggggttaagag 27460539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 431
Target Start/End: Original strand, 52271123 - 52271199
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcac 431  Q
    |||||||||  |||||||||||||||| | |||||||| |||||| |  ||||||| ||||||||| ||||||||||    
T  52271123 ttttcttcactttgtattgtcttcaaataccttctaagtaccattgaacttcaatcttcatatcctcgatccttcac 52271199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 418
Target Start/End: Original strand, 25494367 - 25494430
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatc 418  Q
    |||||||||  |||||||||||||||||| |||||||||||||||  | ||||||| |||||||    
T  25494367 ttttcttcactttgtattgtcttcaaaaaccttctaagaaccattggtcttcaatcttcatatc 25494430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 34533234 - 34533183
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaact 52  Q
    ||||||||||||||||||||||||||||||| ||||| | | ||||||||||    
T  34533234 aacataccctagagagaacaagaggaggatgaagatcctcttccttgaaact 34533183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 26853916 - 26853978
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggtt 160  Q
    |||||||||||||||||  |||| |||| |||||| ||||||||  |||||||||||||||||    
T  26853916 tttctgaatgaataaaatagtgttcaagggtctctatttatagtgtatcattacttaggggtt 26853978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 19257684 - 19257766
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  |||||||||||||||| | |||||||||||  || |||||||||| ||||||||| |||| ||||  |||||||    
T  19257684 ttttcttcactttgtattgtcttcaaagaccttctaagaac--ttgatgttcaatcttcatatcctcgatctttcatgtgatgtc 19257766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 438
Target Start/End: Complemental strand, 31313778 - 31313705
Alignment:
Q  365 cttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 438  Q
    ||||||||||||||||||| ||| |||||| |||| || |||| || |||||| ||| ||||||||| ||||||    
T  31313778 cttgtattgtcttcaaaaaccttataagaatcattgatcttcattcttcatattcttaatccttcacgtgatgt 31313705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 419
Target Start/End: Complemental strand, 21548884 - 21548820
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatcc 419  Q
    |||| |||| |||||||| ||||||||  ||||||||||||||||||  ||||||| ||||||||    
T  21548884 tttttttcaacttgtattatcttcaaatgtcttctaagaaccatttagcttcaatcttcatatcc 21548820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 34533151 - 34533083
Alignment:
Q  97 ttttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||  | || ||||||||| | |||||||    
T  34533151 ttttctaaatgaataagaatgtgtgcaagagtctctatttatatcatatgattacttagagtttaagag 34533083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 25126964 - 25126901
Alignment:
Q  102 tgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    |||||||||||||| |||| ||||  ||||| |||||| ||||||| ||||| |||||||||||    
T  25126964 tgaatgaataaaaaagtgttcaaggatctctatttataatacatcactactttggggttaagag 25126901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 14745070 - 14745128
Alignment:
Q  135 ttatagtacatcattacttaggggttaagag-gtgaaaatttgggttttccactaaaaa 192  Q
    |||| |||||||||||||||||||||||||| |  |||| | |||||||||||||||||    
T  14745070 ttatggtacatcattacttaggggttaagagagaaaaaaatagggttttccactaaaaa 14745128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 439
Target Start/End: Original strand, 27461069 - 27461143
Alignment:
Q  365 cttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||||||||||||| ||| ||||||||||| || ||||  | ||||||||| |||| ||||  |||||||    
T  27461069 cttgtattgtcttcaaaaaccttttaagaaccattgatcttcatacttcatatcctcgatctttcatgtgatgtc 27461143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 431
Target Start/End: Original strand, 23519647 - 23519722
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcac 431  Q
    |||||||||  || |||||||||||| || |||||||||||||||  | ||||||  |||||| |||||||||||||    
T  23519647 ttttcttcactttctattgtcttcaacaaccttctaagaaccattggtcttcaat-ttcatattcttgatccttcac 23519722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 25730464 - 25730524
Alignment:
Q  370 attgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 430  Q
    |||||| ||||||| |||| |||||||||| || || |||| |||| ||||||||||||||    
T  25730464 attgtcgtcaaaaaccttccaagaaccattgatcttaaatcttcatctccttgatccttca 25730524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30676030 - 30675994
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatc 37  Q
    |||||||||||||||||  ||||||||||||||||||    
T  30676030 aacataccctagagagactaagaggaggatggagatc 30675994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 30781996 - 30781913
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  ||||||||||||||| || ||| |||||||| || || |||||| ||   |||||||||||||||| |||||||    
T  30781996 ttttcttcactttgtattgtcttcaacaaccttttaagaacccttgatcttcaattct-tcatccttgatccttcacatgatgtc 30781913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 428
Target Start/End: Original strand, 31319499 - 31319563
Alignment:
Q  365 cttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatc-cttgatcctt 428  Q
    |||| |||||||||||||| ||||||||||||||| || |||| |  ||||||| ||||||||||    
T  31319499 cttgcattgtcttcaaaaaacttctaagaaccattgatcttcattattcatatctcttgatcctt 31319563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 96 - 220
Target Start/End: Complemental strand, 15349225 - 15349100
Alignment:
Q  96 cttttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatttgggtttt-ccactaaaaaca 194  Q
    ||||||||| | ||||||| |||| | |||||||||| ||||||||| || ||||| || ||||||| || |||||| | ||||||| ||||||||| ||    
T  15349225 cttttctgagtaaataaaagtgtgagtaagagtctctatttatagtatattattacgtatgggttaaaagatgaaaaatagggtttttccactaaaatca 15349126  T
Q  195 acttggaaaacaagcaaaagtcacct 220  Q
    ||||| ||||||| |||||| |||||    
T  15349125 acttgaaaaacaaacaaaaggcacct 15349100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 15382184 - 15382087
Alignment:
Q  106 tgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatttgggttttccactaaaaacaacttggaaa 203  Q
    ||||||||  |||||||||| |||||| |||||||| || |||||| || ||||||| || | |||||| |||||||||||||||| |||||||||||    
T  15382184 tgaataaacgtgtgtgcaagtgtctctatttatagtgcaacattacgtatgggttaaaagataaaaattagggttttccactaaaatcaacttggaaa 15382087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 13830419 - 13830496
Alignment:
Q  3 cataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccac 81  Q
    |||||||||||||||||||||||||||||||||||   | ||||| |||| || |||||||||||||||||| ||||||    
T  13830419 cataccctagagagaacaagaggaggatggagatccccttccttggaact-ctaatgtttgacccttgccttataccac 13830496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 16528255 - 16528162
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatg 95  Q
    ||||||||||||||||||||||||||||||| ||||| | | ||||| ||||||  ||| ||||||||| ||||| || ||||||||||| ||||    
T  16528255 aacataccctagagagaacaagaggaggatgaagatcctctgccttggaactcc-aatgcttgaccctttccttgaacaactagctttctaaatg 16528162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 436
Target Start/End: Original strand, 33638394 - 33638464
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgat 436  Q
    ||||||| |||||||| | ||| ||||||||||| || ||||||| |||||||||||||||||||||||||    
T  33638394 ttgtattatcttcaaagaccttataagaaccattgatcttcaatcttcatatccttgatccttcacttgat 33638464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 220
Target Start/End: Complemental strand, 15318576 - 15318451
Alignment:
Q  96 cttttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtg-aaaatttgggttttccactaaaaaca 194  Q
    ||||||||| | ||||||| |||| |||||||||||| || ||||| ||||||||| || ||||||| || || |||||  || ||||||||||||| ||    
T  15318576 cttttctgattaaataaaagtgtgcgcaagagtctctattcatagtgcatcattacgtatgggttaaaagatgaaaaataaggtttttccactaaaatca 15318477  T
Q  195 acttggaaaacaagcaaaagtcacct 220  Q
     |||| ||||||| |||||| |||||    
T  15318476 gcttgaaaaacaaacaaaaggcacct 15318451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 431
Target Start/End: Original strand, 26499736 - 26499801
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcac 431  Q
    |||||||||||||||||| ||||||||||||||| || ||||||| ||||||||| |||| |||||    
T  26499736 ttgtattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcatatcctcgatctttcac 26499801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 22262899 - 22262835
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaa 162  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| || ||||||||||||||| ||||    
T  22262899 tttctcaatgaataaaagtgtgtgcaagagtctctatttatggtgcatcattacttagggtttaa 22262835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 15376040 - 15375821
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatgctttt 100  Q
    ||||||||||||||||||||||  |||||| |||||| | | ||||||| ||||| ||| | ||||||| ||||||    ||| ||| ||  |  | |||    
T  15376040 aacataccctagagagaacaagttgaggattgagatcgtctgccttgaagctcctgatgatggacccttaccttgtttttctatcttgcttgacacgttt 15375941  T
Q  101 ctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatttgggttttccactaaaaacaacttgg 200  Q
     ||| ||| |||   |||| |||||||||||| |||||||| ||||||||| || | ||||| || |||||||  ||||||| ||  |||  ||||||||    
T  15375940 atgattgattaactgtgtgcgcaagagtctctatttatagtgcatcattacgtatgagttaaaagatgaaaataagggtttttcaaaaaagtcaacttgg 15375841  T
Q  201 aaaacaagcaaaagtcacct 220  Q
    |||| ||||||||| |||||    
T  15375840 aaaagaagcaaaaggcacct 15375821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 26499365 - 26499458
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatg 95  Q
    |||||||| |||||||||||||||||||||||||||| | | |||||||  | || ||| || ||||||||||||| || |||||||||| ||||    
T  26499365 aacataccttagagagaacaagaggaggatggagatcattttccttgaagat-ctgatgcttaacccttgccttgtgcctctagctttctgaatg 26499458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 430
Target Start/End: Complemental strand, 30355539 - 30355478
Alignment:
Q  369 tattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 430  Q
    ||||||||||||||| ||||||||||| ||| || ||||||| ||||||||| |||||||||    
T  30355539 tattgtcttcaaaaaccttctaagaacgattgatcttcaatcttcatatcctcgatccttca 30355478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 421
Target Start/End: Complemental strand, 24618117 - 24618053
Alignment:
Q  357 ttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatcctt 421  Q
    ||||||| ||||||||||||| ||| |||||||||||| |||| || ||||||| ||||||||||    
T  24618117 ttcttcaacttgtattgtctttaaagatcttctaagaatcattgatcttcaatcttcatatcctt 24618053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 329
Target Start/End: Original strand, 17198575 - 17198638
Alignment:
Q  266 ggcatcaaggaatgttgtctcatgcgcaggggcgcatgaggcagtgccttcaatgcgaattttg 329  Q
    |||| ||| ||||| |||||||||| ||||||| ||||||||||||||| |||||| |||||||    
T  17198575 ggcagcaatgaatgatgtctcatgcacaggggcacatgaggcagtgcctccaatgcaaattttg 17198638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 32930065 - 32930132
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    ||||||||||||||||| ||| ||||||||||||| |||||| |  |||||||||||||  |||||||    
T  32930065 tttctgaatgaataaaagtgtatgcaagagtctctatttataatggatcattacttaggaattaagag 32930132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 10976662 - 10976712
Alignment:
Q  97 ttttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatca 147  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||| |||||    
T  10976662 ttttctgaatgaataaaagtgtgtgccagagtctctatttatagtgcatca 10976712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 17198407 - 17198468
Alignment:
Q  104 aatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    |||||||||||  || |||||| |||||| |||| | |||||||||||||||||||||||||    
T  17198407 aatgaataaaagagtatgcaagggtctctatttagaatacatcattacttaggggttaagag 17198468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 12971952 - 12972011
Alignment:
Q  104 aatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaag 163  Q
    |||||||||||  || |||||| |||||| |||||||| ||||||||| |||||||||||    
T  12971952 aatgaataaaagagtctgcaagggtctctatttatagtgcatcattacgtaggggttaag 12972011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 22262983 - 22262890
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatg 95  Q
    |||||||  |||||| || |||| |||||||| |||| | ||||||||| ||  | ||| ||||||||||||||| ||| |||||||||||||||    
T  22262983 aacatacattagagaaaataagaagaggatggcgatcctctaccttgaagcta-tgatgcttgacccttgccttgaaccgctagctttctcaatg 22262890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 439
Target Start/End: Original strand, 9396496 - 9396569
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||||||||||||  ||||||||| | || || |||| || || | ||||||||||||||| |||||||    
T  9396496 ttgtattgtcttcaaaaaatttctaagaatcgttgatcttcattcttcttgtccttgatccttcacgtgatgtc 9396569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 12971867 - 12971903
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatc 37  Q
    |||||||| |||||||||||||||||||||| |||||    
T  12971867 aacataccatagagagaacaagaggaggatgaagatc 12971903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 17860327 - 17860371
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatt 399  Q
    |||||||||  ||||||||||| |||||| |||||||||||||||    
T  17860327 ttttcttcactttgtattgtctacaaaaaccttctaagaaccatt 17860371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 28178585 - 28178541
Alignment:
Q  8 cctagagagaacaagaggaggatggagatcttataccttgaaact 52  Q
    ||||||||||| |||||||||||| ||||||| | ||||||||||    
T  28178585 cctagagagaataagaggaggatgtagatcttttgccttgaaact 28178541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 30235879 - 30235907
Alignment:
Q  1 aacataccctagagagaacaagaggagga 29  Q
    |||||||||||||||||||||||||||||    
T  30235879 aacataccctagagagaacaagaggagga 30235907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 8241 - 8401
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatgctttt 100  Q
    ||||||| ||||||||||||||||||||||||| ||| | ||||||| |||| || ||| ||||||||||| ||||| || ||||            |||    
T  8241 aacatacactagagagaacaagaggaggatggatatcctctaccttggaact-ctgatgcttgacccttgcgttgtaacattagc------------ttt 8327  T
Q  101 ctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagaggtgaaaatt 174  Q
    |||||||||||||||||| |||||| |||||| ||||||| | || ||||||||||| | |||||  |||||||    
T  8328 ctgaatgaataaaaatgtctgcaagggtctctatttatagcatattattacttagggttaaagagaagaaaatt 8401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 11271 - 11422
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatcttataccttgaaactccttatgtttgacccttgccttgtaccactagctttctcaatgctttt 100  Q
    ||||||| ||||||||||||||||||||||||| ||| | ||||||| ||||  | ||| ||||||||||||||||| |  ||||            |||    
T  11271 aacatacactagagagaacaagaggaggatggatatcctctaccttggaact-ttgatgcttgacccttgccttgtaacgttagc------------ttt 11357  T
Q  101 ctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttaggggttaagag 165  Q
    |||||||||||||||| |||||||| |||||| ||||||| | || ||||||||||  |||||||    
T  11358 ctgaatgaataaaaatatgtgcaagggtctctatttatagcatattattacttaggatttaagag 11422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 424
Target Start/End: Original strand, 11678 - 11746
Alignment:
Q  356 tttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgat 424  Q
    |||| |||||||| |||| ||||||||| ||||||||||| |||||| |||| || | |||||||||||    
T  11678 tttcgtcatcttgcattgacttcaaaaaccttctaagaactatttatattcattcttaatatccttgat 11746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 439
Target Start/End: Complemental strand, 6432 - 6348
Alignment:
Q  354 tttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||||  ||||||| ||||||||||||||||| ||||||||  | ||||||  |||||||||||||||||||| |||||||    
T  6432 tttttcttcactttgtattttcttcaaaaatcttctaggaaccattggtcttcaat-ttcatatccttgatccttcacgtgatgtc 6348  T

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Target: scaffold0171; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 21623 - 21559
Alignment:
Q  366 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 430  Q
    |||||||||||| ||||| ||||||||||||||| || ||||||| ||||||| |||||||||||    
T  21623 ttgtattgtctttaaaaaccttctaagaaccattgatcttcaatcttcatatcattgatccttca 21559  T

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Target: scaffold0190 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 11265 - 11317
Alignment:
Q  102 tgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattactta 154  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  11265 tgaatgaataaaaaagtgtgcaagtgtctctatttatagtacatcattactta 11317  T

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Target: scaffold0190; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 11576 - 11660
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  |||||||||||||||| | ||| |||||| |||| || ||||||| ||| || ||  |||||| ||||||||||    
T  11576 ttttcttcactttgtattgtcttcaaataccttataagaatcattgatattcaatcttcaaattctcaatccttaacttgatgtc 11660  T

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Target: scaffold0282 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 22492 - 22575
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    ||||||||| ||||||||||||| ||||| |||||| |||||||| |  |||| || ||||||||||||| |||||| |||||||    
T  22492 ttttcttcaccttgtattgtcttaaaaaaccttctatgaaccattga-cttcattcttcatatccttgattcttcacgtgatgtc 22575  T

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Target: scaffold0188 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 26833 - 26917
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  ||||||||||||||| ||  |||||||||||||| |  ||||||  |||||||||||||| ||||| |||||||    
T  26833 ttttcttcactttgtattgtcttcaagaactttctaagaaccattgaacttcaattttcatatccttgatctttcacgtgatgtc 26917  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 227709 - 227745
Alignment:
Q  1 aacataccctagagagaacaagaggaggatggagatc 37  Q
    ||||||| |||||||||||||||||||||||||||||    
T  227709 aacatactctagagagaacaagaggaggatggagatc 227745  T

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Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 228065 - 228109
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatt 399  Q
    |||||||||  |||||||||||||||| | |||||||||||||||    
T  228065 ttttcttcactttgtattgtcttcaaataccttctaagaaccatt 228109  T

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Target: scaffold0337 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 3664 - 3603
Alignment:
Q  97 ttttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattacttagggg 158  Q
    |||| ||||||||||||   ||||||||| |||||| |||||||| ||| ||||||||||||    
T  3664 ttttatgaatgaataaactagtgtgcaagggtctctatttatagtgcataattacttagggg 3603  T

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Target: scaffold0337; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 3742 - 3714
Alignment:
Q  9 ctagagagaacaagaggaggatggagatc 37  Q
    |||||||||||||||||||||||||||||    
T  3742 ctagagagaacaagaggaggatggagatc 3714  T

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Target: scaffold0065 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 12796 - 12731
Alignment:
Q  98 tttctgaatgaataaaaatgtgtgcaagagtctctgtttatagtacatcattac-ttaggggttaa 162  Q
    ||||||||||||||||   ||||||||| |||||| |||||||| ||| ||||| |||||||||||    
T  12796 tttctgaatgaataaactggtgtgcaagggtctctatttatagtgcataattactttaggggttaa 12731  T

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Target: scaffold0065; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 12875 - 12847
Alignment:
Q  9 ctagagagaacaagaggaggatggagatc 37  Q
    |||||||||||||||||||||||||||||    
T  12875 ctagagagaacaagaggaggatggagatc 12847  T

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Target: scaffold0650 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 5648 - 5731
Alignment:
Q  355 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 439  Q
    |||||||||  ||||||| |||| ||| | ||||||||||||||| |  ||||||| ||||||||| |||||||||  |||||||    
T  5648 ttttcttcactttgtattttctttaaagaccttctaagaaccattga-attcaatcttcatatcctcgatccttcatgtgatgtc 5731  T

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