View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7832_high_6 (Length: 626)

Name: NF7832_high_6
Description: NF7832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7832_high_6
NF7832_high_6
[»] chr5 (23 HSPs)
chr5 (17-292)||(41929555-41929830)
chr5 (415-617)||(41929230-41929432)
chr5 (415-511)||(3729331-3729427)
chr5 (415-513)||(8159068-8159166)
chr5 (418-511)||(34766885-34766978)
chr5 (415-502)||(21583853-21583940)
chr5 (124-271)||(41912012-41912162)
chr5 (417-513)||(9793732-9793828)
chr5 (415-503)||(21020686-21020774)
chr5 (417-505)||(39508316-39508404)
chr5 (173-279)||(41938537-41938644)
chr5 (417-510)||(20736158-20736251)
chr5 (428-513)||(25081760-25081845)
chr5 (428-513)||(25139729-25139814)
chr5 (421-513)||(9913795-9913887)
chr5 (417-504)||(9793635-9793722)
chr5 (415-506)||(2068963-2069050)
chr5 (423-508)||(20815668-20815753)
chr5 (415-513)||(3711175-3711277)
chr5 (510-577)||(41911850-41911917)
chr5 (418-480)||(41910219-41910281)
chr5 (417-511)||(38451039-38451122)
chr5 (78-118)||(17258912-17258952)
[»] scaffold0306 (1 HSPs)
scaffold0306 (417-513)||(13056-13152)
[»] scaffold0152 (1 HSPs)
scaffold0152 (417-513)||(22175-22271)
[»] chr3 (15 HSPs)
chr3 (415-510)||(37115885-37115980)
chr3 (417-511)||(36404222-36404316)
chr3 (415-511)||(45602979-45603075)
chr3 (417-513)||(29360475-29360571)
chr3 (419-507)||(35534481-35534569)
chr3 (415-511)||(52742347-52742443)
chr3 (417-505)||(39391958-39392046)
chr3 (417-509)||(46487267-46487358)
chr3 (423-511)||(14201712-14201798)
chr3 (417-503)||(48944105-48944191)
chr3 (422-494)||(16353494-16353566)
chr3 (417-492)||(3618340-3618415)
chr3 (419-489)||(48644538-48644608)
chr3 (417-490)||(54882992-54883065)
chr3 (418-481)||(47599389-47599452)
[»] chr2 (25 HSPs)
chr2 (417-508)||(5958964-5959055)
chr2 (415-507)||(6974515-6974607)
chr2 (419-511)||(37060081-37060173)
chr2 (417-513)||(4382200-4382296)
chr2 (415-511)||(13274196-13274291)
chr2 (415-511)||(30609684-30609780)
chr2 (417-511)||(37140127-37140228)
chr2 (417-526)||(27004429-27004538)
chr2 (417-508)||(21423363-21423454)
chr2 (421-509)||(24475936-24476024)
chr2 (421-509)||(28107492-28107580)
chr2 (417-502)||(15070390-15070475)
chr2 (417-506)||(37802836-37802925)
chr2 (422-505)||(30393597-30393680)
chr2 (417-508)||(14786238-14786323)
chr2 (418-513)||(5807321-5807415)
chr2 (425-505)||(22194291-22194371)
chr2 (419-505)||(10217357-10217443)
chr2 (417-478)||(7747945-7748006)
chr2 (417-472)||(30757184-30757239)
chr2 (421-482)||(15431254-15431315)
chr2 (423-500)||(43022888-43022964)
chr2 (449-497)||(27404647-27404695)
chr2 (419-482)||(27969511-27969574)
chr2 (76-118)||(43985032-43985074)
[»] chr8 (18 HSPs)
chr8 (415-513)||(16655971-16656069)
chr8 (422-511)||(23403593-23403682)
chr8 (418-511)||(30204649-30204742)
chr8 (415-511)||(4623848-4623944)
chr8 (415-511)||(37629997-37630093)
chr8 (418-513)||(4234171-4234266)
chr8 (421-512)||(14842302-14842393)
chr8 (417-506)||(21567707-21567796)
chr8 (434-511)||(22798536-22798613)
chr8 (417-513)||(36470135-36470232)
chr8 (422-506)||(3001382-3001466)
chr8 (417-503)||(39436844-39436930)
chr8 (415-511)||(29958512-29958608)
chr8 (422-511)||(23275532-23275621)
chr8 (418-505)||(41787497-41787584)
chr8 (421-503)||(36046533-36046614)
chr8 (469-506)||(4414226-4414263)
chr8 (457-514)||(45310055-45310112)
[»] chr7 (9 HSPs)
chr7 (417-511)||(40337066-40337160)
chr7 (418-513)||(8163644-8163739)
chr7 (417-510)||(41326037-41326130)
chr7 (418-513)||(2362383-2362478)
chr7 (417-505)||(28089134-28089223)
chr7 (422-504)||(35589412-35589494)
chr7 (417-472)||(43403211-43403266)
chr7 (77-118)||(1350271-1350312)
chr7 (469-505)||(31637707-31637743)
[»] chr6 (11 HSPs)
chr6 (417-503)||(2814890-2814976)
chr6 (415-513)||(26393987-26394085)
chr6 (417-510)||(24640352-24640445)
chr6 (417-505)||(444522-444610)
chr6 (418-513)||(6200163-6200258)
chr6 (417-511)||(1067795-1067890)
chr6 (421-506)||(23774069-23774154)
chr6 (464-511)||(12324167-12324214)
chr6 (418-482)||(34710135-34710199)
chr6 (425-487)||(2993592-2993654)
chr6 (417-466)||(4032327-4032376)
[»] chr4 (16 HSPs)
chr4 (417-511)||(35929702-35929796)
chr4 (423-505)||(56100144-56100226)
chr4 (417-509)||(36609413-36609506)
chr4 (417-504)||(21555382-21555469)
chr4 (417-511)||(23249465-23249559)
chr4 (415-504)||(12701040-12701129)
chr4 (418-495)||(827840-827917)
chr4 (417-512)||(19598361-19598456)
chr4 (415-514)||(27733375-27733467)
chr4 (417-511)||(44243696-44243790)
chr4 (422-505)||(41842789-41842871)
chr4 (418-506)||(35749385-35749473)
chr4 (454-511)||(53584603-53584660)
chr4 (74-117)||(1404414-1404457)
chr4 (77-118)||(28615334-28615375)
chr4 (417-457)||(53583471-53583511)
[»] chr1 (16 HSPs)
chr1 (417-509)||(39001944-39002036)
chr1 (415-513)||(6750308-6750406)
chr1 (417-509)||(11121854-11121946)
chr1 (417-507)||(3695405-3695495)
chr1 (419-511)||(41998881-41998973)
chr1 (422-513)||(571640-571731)
chr1 (422-505)||(794914-794997)
chr1 (422-513)||(26653945-26654036)
chr1 (417-503)||(18808781-18808867)
chr1 (419-511)||(24909510-24909602)
chr1 (417-485)||(36290612-36290680)
chr1 (428-511)||(1585855-1585938)
chr1 (422-513)||(44272362-44272454)
chr1 (442-509)||(4792593-4792660)
chr1 (470-505)||(9224877-9224912)
chr1 (417-479)||(7409823-7409885)
[»] scaffold0302 (1 HSPs)
scaffold0302 (415-511)||(18501-18597)
[»] scaffold0121 (1 HSPs)
scaffold0121 (417-509)||(37403-37495)
[»] scaffold0025 (1 HSPs)
scaffold0025 (419-510)||(67868-67959)
[»] scaffold0140 (1 HSPs)
scaffold0140 (417-509)||(21473-21565)
[»] scaffold0532 (1 HSPs)
scaffold0532 (417-505)||(11320-11408)
[»] scaffold1248 (1 HSPs)
scaffold1248 (415-504)||(970-1059)
[»] scaffold0952 (1 HSPs)
scaffold0952 (415-504)||(1254-1343)


Alignment Details
Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 17 - 292
Target Start/End: Complemental strand, 41929830 - 41929555
Alignment:
Q  17 ataagtgcttatatttaggctatttctaatctataacaaaagataacatggagttaaacttataagttgttttcataaactatcatgaggagcttatgaa 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41929830 ataagtgcttatatttaggctatttctaatctataacaaaagataacatggagttaaatttataagttgttttcataaactatcatgaggagcttatgaa 41929731  T
Q  117 aaagaatagataaaaacaactcatagacatgttattaactgtttctataaactccttcaaataatttcacaagtgcttatgctagtaaacaaaaattatg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||    
T  41929730 aaagaatagataaaaacaactcatagacatgttattaactgtttctataaactccttcaaataatttcacaagtgcttatgctagtaaaaaaaatatatg 41929631  T
Q  217 taagcaaatgaaaacaaccttggtgcatgaactaatccaagaaaaactcaatagatgtttatagagaaacaagagc 292  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41929630 taagcaaatgaaaataaccttggtgcatgaactaatccaagaaaaactcaataaatgtttatagagaaacaagagc 41929555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 415 - 617
Target Start/End: Complemental strand, 41929432 - 41929230
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctcttac 514  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41929432 gaggactaaaactaaaacatgtaaaaggataactattgcgaaaagagaacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctcttac 41929333  T
Q  515 attttgtttgtgagacatcaattcaacaatttcaaagacatgaaaacctagcaaactagcaataatactctcatcactacattttgtaccttatcagtat 614  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41929332 attttgtttgtgagacatcaattcaacaatttcaaagacaagaaaacctagcaaactagcaataatactctcatcactacattttgtaccttatcagtat 41929233  T
Q  615 tat 617  Q
    |||    
T  41929232 tat 41929230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 415 - 511
Target Start/End: Original strand, 3729331 - 3729427
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3729331 gaggactaaaactaaaacatgtaaaaggataattattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 3729427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 415 - 513
Target Start/End: Original strand, 8159068 - 8159166
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||    
T  8159068 gaggactaaaactaaaacatgtaaaaggataattattgtgagaagaggacttgtatatttcaaaaattgaaaacaaaaactatttcaaacagactctta 8159166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 418 - 511
Target Start/End: Original strand, 34766885 - 34766978
Alignment:
Q  418 gactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  34766885 gactaaaactaaaacatgtaaaagaataactattgtgagaagaggacttgtatatttcaaaaattgaaaacaaaaactatttcaaacaggctct 34766978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 415 - 502
Target Start/End: Complemental strand, 21583940 - 21583853
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaa 502  Q
    |||||||||||||||||||||||||| ||||||||||  ||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  21583940 gaggactaaaactaaaacatgtaaaaagataactattatgagaagatgacttgtatatttcaaaaactgaaaacaaaaactatttcaa 21583853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 124 - 271
Target Start/End: Complemental strand, 41912162 - 41912012
Alignment:
Q  124 agataaaaacaactcatagacatgttattaactgtttctataaactccttcaaataatttcacaagtgcttatgctagtaaacaaaaattatgtaagcaa 223  Q
    |||| ||||||| | ||||| |||| || ||||||| ||||||||| |||||||||||| ||| |||||||||| |||||||  ||||||||||||||||    
T  41912162 agatgaaaacaatttatagatatgtcataaactgttgctataaactacttcaaataattacactagtgcttatgatagtaaa-taaaattatgtaagcaa 41912064  T
Q  224 atgaaaaca--accttggtgc--atgaactaatccaagaaaaactcaataga 271  Q
    || ||||||  ||||||||||  ||||||||||||| |||||||||||||||    
T  41912063 ataaaaacaagaccttggtgcatatgaactaatccatgaaaaactcaataga 41912012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 417 - 513
Target Start/End: Original strand, 9793732 - 9793828
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    ||||||||||||||||| |||||| |||||||||||  | ||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9793732 ggactaaaactaaaacaagtaaaaggataactattgtaaaaaggggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 9793828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 415 - 503
Target Start/End: Complemental strand, 21020774 - 21020686
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaa 503  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||    
T  21020774 gaggactaaaactaaatcatataaaaggataactattgcgagaagaagacttatatatttcaaaaactgaaaacaaaaactatttcaaa 21020686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 417 - 505
Target Start/End: Original strand, 39508316 - 39508404
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    ||||||||||||||||||||||||  |||||||||| ||||| | |||||| |||||||||||||||||||||||||||||||||||||    
T  39508316 ggactaaaactaaaacatgtaaaagaataactattgtgagaaaaagacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 39508404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 173 - 279
Target Start/End: Complemental strand, 41938644 - 41938537
Alignment:
Q  173 tcaaataatttcacaagtgcttat---gctagtaaacaaaaattatgtaagcaaatgaaaacaaccttggtgcatgaactaatccaagaaaaactcaata 269  Q
    ||||||||||||||||||||||||   ||||||||| |||| ||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||    
T  41938644 tcaaataatttcacaagtgcttattatgctagtaaataaaa-ttatgtaagaaaataaaaacaaccttggtgcatgaactaatcc-agaaaaactcaata 41938547  T
Q  270 gatgtttata 279  Q
    ||| ||||||    
T  41938546 gatttttata 41938537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 417 - 510
Target Start/End: Original strand, 20736158 - 20736251
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctc 510  Q
    |||||||||||||||||||||||||||||||||||| || | ||||||||  || ||||||||| |||||||||||||||||||||||| ||||    
T  20736158 ggactaaaactaaaacatgtaaaatgataactattgtgaaaggaggacttatatttttcaaaaattgaaaacaaaaactatttcaaacaagctc 20736251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 428 - 513
Target Start/End: Complemental strand, 25081845 - 25081760
Alignment:
Q  428 aaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    ||||||| ||||||||||||||||| ||||||| | |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  25081845 aaaacatataaaatgataactattgtgagaagatggcttgtatatttcaaaacctgaaaacaaaaactatttcaaacaggctctta 25081760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 428 - 513
Target Start/End: Complemental strand, 25139814 - 25139729
Alignment:
Q  428 aaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    ||||||| ||||||||||||||||| ||||||| | |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  25139814 aaaacatataaaatgataactattgtgagaagatggcttgtatatttcaaaacctgaaaacaaaaactatttcaaacaggctctta 25139729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 421 - 513
Target Start/End: Complemental strand, 9913887 - 9913795
Alignment:
Q  421 taaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    |||||||||||||||||||| ||||||||||  |||| ||| ||||| |||||||||||||| |||||||||||||||||||||| |||||||    
T  9913887 taaaactaaaacatgtaaaaagataactattatgagatgagaacttgtatatttcaaaaactaaaaacaaaaactatttcaaacatgctctta 9913795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 417 - 504
Target Start/End: Original strand, 9793635 - 9793722
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaac 504  Q
    |||||||||||||||||||||||| |||||||||||  | ||| ||| ||| ||||||||||||||||||||||||||||||||||||    
T  9793635 ggactaaaactaaaacatgtaaaaggataactattgtaaaaaggggatttgtatatttcaaaaactgaaaacaaaaactatttcaaac 9793722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 415 - 506
Target Start/End: Complemental strand, 2069050 - 2068963
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    ||||||||||||||||||||  |||| ||||| ||||| ||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  2069050 gaggactaaaactaaaacat--aaaaagataaatattgtgagaagaagactt--atatttcaaaaactgaaaacaaaaactatttcaaacag 2068963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 423 - 508
Target Start/End: Complemental strand, 20815753 - 20815668
Alignment:
Q  423 aaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||| ||||||| ||||||||||||||||| ||||| |||||||| |||||| |||||||||||||||||||||||| ||| ||||    
T  20815753 aaacaaaaacatataaaatgataactattgtgagaaaaggacttgtatattttaaaaactgaaaacaaaaactattttaaataggc 20815668  T

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Target: chr5; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 415 - 513
Target Start/End: Complemental strand, 3711277 - 3711175
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttg----catatttcaaaaactgaaaacaaaaactatttcaaacaggctc 510  Q
    ||||| |||| ||||||||||||||| ||||||||||| || || || |||||     ||||||||||||||||||||||||||||||||||||| ||||    
T  3711277 gaggattaaatctaaaacatgtaaaaagataactattgtgaaaatagaacttgtatatatatttcaaaaactgaaaacaaaaactatttcaaacatgctc 3711178  T
Q  511 tta 513  Q
    |||    
T  3711177 tta 3711175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 41911917 - 41911850
Alignment:
Q  510 cttacattttgtttgtgagacatcaattcaacaatttcaaagacatgaaaacctagcaaactagcaat 577  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| |||||| |||||    
T  41911917 cttacattttgattgggagacattaattcaacaatttcaaagacatgaaaacctaacaaactcgcaat 41911850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 418 - 480
Target Start/End: Original strand, 41910219 - 41910281
Alignment:
Q  418 gactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaa 480  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| |||||| |||||    
T  41910219 gactaaaactaaaacatgtaaaatgataactattgtgaaaagaggacttgtatattttaaaaa 41910281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 417 - 511
Target Start/End: Original strand, 38451039 - 38451122
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||||||||||| ||||||||||| |||||| ||||||           ||||||||||||||||||||||||||||||||||    
T  38451039 ggactaaaactaaaacatgtaaaaggataactattgtgagaaggggactt-----------aaactgaaaacaaaaactatttcaaacaggctct 38451122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 17258952 - 17258912
Alignment:
Q  78 ataagttgttttcataaactatcatgaggagcttatgaaaa 118  Q
    ||||| ||||||||||||||||| ||| |||||||||||||    
T  17258952 ataagctgttttcataaactatcctgaagagcttatgaaaa 17258912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 417 - 513
Target Start/End: Original strand, 13056 - 13152
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  13056 ggactaaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccctta 13152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 417 - 513
Target Start/End: Complemental strand, 22271 - 22175
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  22271 ggactaaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggccctta 22175  T

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Target: chr3 (Bit Score: 80; Significance: 3e-37; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 415 - 510
Target Start/End: Original strand, 37115885 - 37115980
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctc 510  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||    
T  37115885 gaggactaaaactaaaacatataaaatgataactattgcgagaagatgacttatatatttcaaaaactgaaaacaaaaactatttcaaacaggctc 37115980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 417 - 511
Target Start/End: Original strand, 36404222 - 36404316
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  36404222 ggactaaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaagaggctct 36404316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 415 - 511
Target Start/End: Complemental strand, 45603075 - 45602979
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||||||||||||| ||||||||||| || |||| |||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  45603075 gaggactaaaactaaaacatgtaaaaggataactattgtgataagatgacttgtatatttcaaaaactgaaaacaaaaactatttcaaacagactct 45602979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 417 - 513
Target Start/End: Complemental strand, 29360571 - 29360475
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||    
T  29360571 ggactaaaactaaaacatgtaaaaggataactactgtgagaagaggacttgtatatttcaaaaactgaaaagaaaaattgtttcaaacaggctctta 29360475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 419 - 507
Target Start/End: Complemental strand, 35534569 - 35534481
Alignment:
Q  419 actaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacagg 507  Q
    |||||||||||||||| ||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||| |||||||    
T  35534569 actaaaactaaaacatataaaatgataactattgtgagaagaagacttgtatatttcaaaaactgaaaacaaaaactattttaaacagg 35534481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 415 - 511
Target Start/End: Complemental strand, 52742443 - 52742347
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    ||||| ||||||||||| ||||||||||||||||||||||| ||||| | ||| ||||||||||||||| |||||||||||||||||||||||||||    
T  52742443 gaggattaaaactaaaatatgtaaaatgataactattgcgataagagaatttgtatatttcaaaaactggaaacaaaaactatttcaaacaggctct 52742347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 417 - 505
Target Start/End: Complemental strand, 39392046 - 39391958
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||||||||||||||||||| ||||||||||| || ||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  39392046 ggactaaaactaaaacatgtaaaaggataactattgtgaaaagaaaacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 39391958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 417 - 509
Target Start/End: Complemental strand, 46487358 - 46487267
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggct 509  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| |||||  ||||||||||||||||||| |||||||||||||||||||||    
T  46487358 ggactaaaactaaaacatataaaatgataactattgtgagaagaagacttatatatttcaaaaactgaaaa-aaaaactatttcaaacaggct 46487267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 423 - 511
Target Start/End: Complemental strand, 14201798 - 14201712
Alignment:
Q  423 aaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    ||||||||||||||||||  |||||||||| || ||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  14201798 aaactaaaacatgtaaaagaataactattgtgaaaagaggactt--atatttcaaaaactgaaaacaaaaactatttcaaacaggctct 14201712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 417 - 503
Target Start/End: Original strand, 48944105 - 48944191
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaa 503  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||||||| ||||||||||| || |||| |||||||||||||||    
T  48944105 ggactaaaacaaaaacatgtaaaatgataactattgtaagaagaggacttgtatatttcaaaagctaaaaagaaaaactatttcaaa 48944191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 422 - 494
Target Start/End: Original strand, 16353494 - 16353566
Alignment:
Q  422 aaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaac 494  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  16353494 aaaactaaaacatgtaaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaac 16353566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 417 - 492
Target Start/End: Original strand, 3618340 - 3618415
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaa 492  Q
    |||||||||||||||||||||||| ||||| ||||| |||||||  ||||| |||||||| |||||||||||||||    
T  3618340 ggactaaaactaaaacatgtaaaaagataaatattgtgagaagaaaacttgtatatttcagaaactgaaaacaaaa 3618415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 419 - 489
Target Start/End: Complemental strand, 48644608 - 48644538
Alignment:
Q  419 actaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaaca 489  Q
    |||||||||||||||||||||||||||| ||||| ||||||| || ||| |||||||||||| ||||||||    
T  48644608 actaaaactaaaacatgtaaaatgataaatattgtgagaagatgatttgtatatttcaaaaattgaaaaca 48644538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 417 - 490
Target Start/End: Original strand, 54882992 - 54883065
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaa 490  Q
    ||||||||||||||||| |||||| ||||| ||||| |||||||||||||  ||||||||||||| ||||||||    
T  54882992 ggactaaaactaaaacacgtaaaaggataaatattgtgagaagaggacttctatatttcaaaaaccgaaaacaa 54883065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 47599452 - 47599389
Alignment:
Q  418 gactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaac 481  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||| ||||||    
T  47599452 gactaaaactaaaacatgtaaaaggataactattgtgagaagaggatttgtatattttaaaaac 47599389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 417 - 508
Target Start/End: Complemental strand, 5959055 - 5958964
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5959055 ggactaaaactaaaacatgtaaaaggataactattacgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 5958964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 415 - 507
Target Start/End: Original strand, 6974515 - 6974607
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacagg 507  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  6974515 gaggactaaaactaaaacatgtaaaatgataactattgtgagaagagcacttatatatttcaaaaactgaaaacaaaaactatttcaaacagg 6974607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 419 - 511
Target Start/End: Original strand, 37060081 - 37060173
Alignment:
Q  419 actaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  37060081 actaaaactaaaacatgtaaaaggataactattgtgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 37060173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 417 - 513
Target Start/End: Complemental strand, 4382296 - 4382200
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||  | |||||||||    
T  4382296 ggactaaaactaaaacatgtaaaatgataactattgtgagaagagaacttgtatatttcaaaaactgaaaacaaaaactatttcttagaggctctta 4382200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 415 - 511
Target Start/End: Complemental strand, 13274291 - 13274196
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  13274291 gaggactaaaactaaaacatgtaaaa-gataactattgtgagaagaggacttgtatatttcaaaaattaaaaacaaaaactatttcaaacaggctct 13274196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 415 - 511
Target Start/End: Original strand, 30609684 - 30609780
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| |||||||||||||||| ||||||||| ||||||    
T  30609684 gaggactaaaactaaaacatgtaaaatgataactattgtgagaagaagacttgtatatttcaataactgaaaacaaaaacgatttcaaacgggctct 30609780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 417 - 511
Target Start/End: Original strand, 37140127 - 37140228
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgat-------aactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggct 509  Q
    ||||||||||||||||||||||||||||       ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37140127 ggactaaaactaaaacatgtaaaatgataagtgataactattgcgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggct 37140226  T
Q  510 ct 511  Q
    ||    
T  37140227 ct 37140228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 417 - 526
Target Start/End: Complemental strand, 27004538 - 27004429
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctcttacat 516  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||||||  |||||||||||| |||||||||||||||||||||||| |||||||  |    
T  27004538 ggactaaaactaaaacatataaaaggataactattgtgagaagaggacttatatatttcaaaaattgaaaacaaaaactatttcaaacatgctcttagtt 27004439  T
Q  517 tttgtttgtg 526  Q
    ||| ||||||    
T  27004438 tttttttgtg 27004429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 417 - 508
Target Start/End: Complemental strand, 21423454 - 21423363
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||||||||||||||||| | ||||||||||| |||| || |||||| ||||||||||||||||||||||||||||||||||||||||    
T  21423454 ggactaaaactaaaacatgtaataggataactattgtgagatgaagacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggc 21423363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 421 - 509
Target Start/End: Original strand, 24475936 - 24476024
Alignment:
Q  421 taaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggct 509  Q
    |||||||||||||||||||| ||||||||||| || |||| || ||| |||||||||||||||||||||||||||||||||||||||||    
T  24475936 taaaactaaaacatgtaaaaagataactattgtgataagaagatttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggct 24476024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 421 - 509
Target Start/End: Original strand, 28107492 - 28107580
Alignment:
Q  421 taaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggct 509  Q
    |||||||||||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||||||||||| | |||||||||||||    
T  28107492 taaaactaaaacatgtaaaaggataactattgtgagaagaggatttgtatatttcaaaaactgaaaacaaaaattgtttcaaacaggct 28107580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 417 - 502
Target Start/End: Original strand, 15070390 - 15070475
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaa 502  Q
    |||||||||| ||||||| ||||| ||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  15070390 ggactaaaacaaaaacatataaaaggataactattgtgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaa 15070475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 417 - 506
Target Start/End: Original strand, 37802836 - 37802925
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    |||||||||||||||||||||||| ||||| ||||  ||||||| |||||| |||||||||||| | |||||||||||||||||||||||    
T  37802836 ggactaaaactaaaacatgtaaaaagataaatattatgagaagaagacttgtatatttcaaaaatttaaaacaaaaactatttcaaacag 37802925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 422 - 505
Target Start/End: Original strand, 30393597 - 30393680
Alignment:
Q  422 aaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    ||||||||||||||||||| |||||| |||   | ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30393597 aaaactaaaacatgtaaaaggataaccattatcaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 30393680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 417 - 508
Target Start/End: Complemental strand, 14786323 - 14786238
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggc 508  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||      ||||||||||||||||||||||||||    
T  14786323 ggactaaaactaaaacatgtaataggataactattgtgagaagaggacttgtatatttca------gaaaacaaaaactatttcaaacaggc 14786238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 418 - 513
Target Start/End: Original strand, 5807321 - 5807415
Alignment:
Q  418 gactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    ||||||||||||||||| ||||| ||||||||||| || ||| | | ||| ||||||||||||||| ||||||||||||||||||||| |||||||    
T  5807321 gactaaaactaaaacatataaaaggataactattgtgaaaagggaatttgtatatttcaaaaactg-aaacaaaaactatttcaaacatgctctta 5807415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 505
Target Start/End: Original strand, 22194291 - 22194371
Alignment:
Q  425 actaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||||||||||||||||||||||   | || |||||||| |||||||||||||  ||||||||||||||||||||||    
T  22194291 actaaaacatgtaaaatgataactattataaaaaaaggacttgtatatttcaaaaaccaaaaacaaaaactatttcaaaca 22194371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 419 - 505
Target Start/End: Original strand, 10217357 - 10217443
Alignment:
Q  419 actaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    ||||||||||||||||||||||  |||||||||   | ||| | ||||| ||||||||||||||||||| |||||||||||||||||    
T  10217357 actaaaactaaaacatgtaaaagaataactattctaaaaagggaacttgtatatttcaaaaactgaaaataaaaactatttcaaaca 10217443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 417 - 478
Target Start/End: Original strand, 7747945 - 7748006
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaa 478  Q
    |||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||    
T  7747945 ggactaaaactaaaacatgtaaaatgataactcttgtaagaagaggacttgtatatttcaaa 7748006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 417 - 472
Target Start/End: Original strand, 30757184 - 30757239
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatat 472  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  30757184 ggactaaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatat 30757239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 482
Target Start/End: Complemental strand, 15431315 - 15431254
Alignment:
Q  421 taaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaact 482  Q
    |||||||||||||||||||| |||||||||| || ||||||||| || ||||||||||||||    
T  15431315 taaaactaaaacatgtaaaaggataactattacgggaagaggacatgtatatttcaaaaact 15431254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 500
Target Start/End: Original strand, 43022888 - 43022964
Alignment:
Q  423 aaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttc 500  Q
    |||||||||||| ||||| ||||| ||| | |||||||||||||| |||||| ||||||| |||||||||| ||||||    
T  43022888 aaactaaaacatataaaaggataattat-gtgagaagaggacttgtatattttaaaaactaaaaacaaaaattatttc 43022964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 497
Target Start/End: Original strand, 27404647 - 27404695
Alignment:
Q  449 attgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactat 497  Q
    |||| |||||||||||||| |||||||||||||| ||||||||||||||    
T  27404647 attgtgagaagaggacttgtatatttcaaaaactaaaaacaaaaactat 27404695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 419 - 482
Target Start/End: Complemental strand, 27969574 - 27969511
Alignment:
Q  419 actaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaact 482  Q
    ||||||| |||||||| ||||| ||||||||||| |||||| | ||||| ||||||||||||||    
T  27969574 actaaaattaaaacatataaaaggataactattgtgagaagtgaacttgtatatttcaaaaact 27969511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 43985074 - 43985032
Alignment:
Q  76 ttataagttgttttcataaactatcatgaggagcttatgaaaa 118  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||    
T  43985074 ttataagttgttttcataagctatcttgaagagcttatgaaaa 43985032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 1e-36; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 415 - 513
Target Start/End: Complemental strand, 16656069 - 16655971
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| | |||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  16656069 gaggactaaaactaaaacatgtaaaatgataactattgtgagaagaaggcttgtatattttaaaaactgaaaacaaaaactatttcaaacaggctctta 16655971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 422 - 511
Target Start/End: Complemental strand, 23403682 - 23403593
Alignment:
Q  422 aaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  23403682 aaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaataggctct 23403593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 418 - 511
Target Start/End: Original strand, 30204649 - 30204742
Alignment:
Q  418 gactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  30204649 gactaaaactaaaacatgtaaaaggataactattgtgagaagatgacttgtatatttcaaaaactgaaaacaaaaactatttcaaagaggctct 30204742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 415 - 511
Target Start/End: Original strand, 4623848 - 4623944
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||| |||||  |||||||||||||||||||||||||||||||||||||| ||||    
T  4623848 gaggactaaaactaaaacatgtaaaaggataactattgtgagaagatgacttatatatttcaaaaactgaaaacaaaaactatttcaaacagtctct 4623944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 415 - 511
Target Start/End: Complemental strand, 37630093 - 37629997
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||| |||  |||||| ||||||||||||||||||||||||||||||||||||    
T  37630093 gaggactaaaactaaaacatgtaaaaggctaactattgcgagaagagggcttatatatttaaaaaactgaaaacaaaaactatttcaaacaggctct 37629997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 418 - 513
Target Start/End: Complemental strand, 4234266 - 4234171
Alignment:
Q  418 gactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    |||| |||||||||||||||||| | ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  4234266 gactcaaactaaaacatgtaaaaggctaactattgcgagaagatgacttgtatatttcaaaaactgaaaacaaaaactattttaaacaggctctta 4234171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 14842393 - 14842302
Alignment:
Q  421 taaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctt 512  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||    
T  14842393 taaaactaaaatatgtaaaatgataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaattatttcaaacatgctctt 14842302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 417 - 506
Target Start/End: Complemental strand, 21567796 - 21567707
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  21567796 ggactaaaactaaaacatgtaaaaagataactattgtaagaagaggatttgtatatttctaaaactgaaaacaaaaactatttcaaacag 21567707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 434 - 511
Target Start/End: Complemental strand, 22798613 - 22798536
Alignment:
Q  434 tgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22798613 tgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 22798536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 417 - 513
Target Start/End: Original strand, 36470135 - 36470232
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactg-aaaacaaaaactatttcaaacaggctctta 513  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||| |||||||||| ||||||||| |||||||||    
T  36470135 ggactaaaactaaaacatgtaaaaggataactattgtgagaagatgacttgtatatttcaaaaactgaaaaacaaaaattatttcaaagaggctctta 36470232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 422 - 506
Target Start/End: Original strand, 3001382 - 3001466
Alignment:
Q  422 aaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  3001382 aaaactaaaacatgtaaaaagataaccattgtgagaagaggacttgtatatttcaaaaactgaaaataaaaactatttcaaacag 3001466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 417 - 503
Target Start/End: Complemental strand, 39436930 - 39436844
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaa 503  Q
    |||||||||||||||||| |||||  |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||||    
T  39436930 ggactaaaactaaaacatataaaaaaataactattgtgagaagaggacttgtatatttcaaaaattgaaaacaaaaattatttcaaa 39436844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 415 - 511
Target Start/End: Original strand, 29958512 - 29958608
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    ||||| |||||||||||||||||||| |||||||||||  | |||| |||||| ||||||||||||||||||||||||| ||||| ||| |||||||    
T  29958512 gaggattaaaactaaaacatgtaaaaggataactattgtaataagatgacttgtatatttcaaaaactgaaaacaaaaattattttaaagaggctct 29958608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 422 - 511
Target Start/End: Original strand, 23275532 - 23275621
Alignment:
Q  422 aaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||||||  |||||||  |  | ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  23275532 aaaactaaaacatgtaaaagaataactaccgtaaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaagaggctct 23275621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 418 - 505
Target Start/End: Complemental strand, 41787584 - 41787497
Alignment:
Q  418 gactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    ||||||||||||||||||||||| |||||||||||  ||||||| | ||  |||||| |||||||||||||||||||||||| |||||    
T  41787584 gactaaaactaaaacatgtaaaaagataactattgtaagaagagaatttatatattttaaaaactgaaaacaaaaactattttaaaca 41787497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 421 - 503
Target Start/End: Original strand, 36046533 - 36046614
Alignment:
Q  421 taaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaa 503  Q
    |||||||||||||||||||| ||||||||||| || |||  || ||| ||||||||||||||| |||||||||||||||||||    
T  36046533 taaaactaaaacatgtaaaaggataactattgtgaaaaggagatttgtatatttcaaaaactg-aaacaaaaactatttcaaa 36046614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 506
Target Start/End: Complemental strand, 4414263 - 4414226
Alignment:
Q  469 atatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4414263 atatttcaaaaactgaaaacaaaaactatttcaaacag 4414226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 514
Target Start/End: Original strand, 45310055 - 45310112
Alignment:
Q  457 aagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctcttac 514  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||| || |||||    
T  45310055 aagagaacttgtatatttcaaaaattgaaaacaaaaactatttcaaacaagcccttac 45310112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 417 - 511
Target Start/End: Original strand, 40337066 - 40337160
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  40337066 ggactaaaactaaaacatgtaaaatgataactattgtgagaagatgacttgcatatttcgaaaactgaaaacaaaaactatttcaaacagactct 40337160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 418 - 513
Target Start/End: Original strand, 8163644 - 8163739
Alignment:
Q  418 gactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  8163644 gactaaaactaaaacatgtaaaaagataactattgtgagaagagaacttgtatatttcaaaaacagaaaacaaaaactatttcaaacagactctta 8163739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 417 - 510
Target Start/End: Complemental strand, 41326130 - 41326037
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctc 510  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| || ||  |||||||||||||| |||||||||||||||||||||| ||||    
T  41326130 ggactaaaactaaaacatgtaaaaggataactattgtgagaagaagatttatatatttcaaaaactcaaaacaaaaactatttcaaacatgctc 41326037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 418 - 513
Target Start/End: Original strand, 2362383 - 2362478
Alignment:
Q  418 gactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    |||||||||||||| | |||||||||||||||||| ||||||| || ||| |||||| |||||||||||||||||| | |||||||||| ||||||    
T  2362383 gactaaaactaaaataagtaaaatgataactattgtgagaagaagatttgtatattttaaaaactgaaaacaaaaattgtttcaaacagactctta 2362478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 417 - 505
Target Start/End: Complemental strand, 28089223 - 28089134
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactg-aaaacaaaaactatttcaaaca 505  Q
    ||||||||||||||||||||||||||||||||||||  |||||| || ||| ||||||||||||||| |||||||||| | |||||||||    
T  28089223 ggactaaaactaaaacatgtaaaatgataactattgtaagaagatgatttgtatatttcaaaaactgaaaaacaaaaattgtttcaaaca 28089134  T

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Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 422 - 504
Target Start/End: Original strand, 35589412 - 35589494
Alignment:
Q  422 aaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaac 504  Q
    |||||||||| || ||||| ||||||||||  || ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  35589412 aaaactaaaatatataaaaggataactattatgaaaagaggacttgtatatttcaaaaatcgaaaacaaaaactatttcaaac 35589494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 472
Target Start/End: Original strand, 43403211 - 43403266
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatat 472  Q
    ||||||||||||||| |||||||| ||||||||||  || ||||||||||| ||||    
T  43403211 ggactaaaactaaaatatgtaaaaggataactattatgataagaggacttgtatat 43403266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 1350312 - 1350271
Alignment:
Q  77 tataagttgttttcataaactatcatgaggagcttatgaaaa 118  Q
    |||||| ||||||||||||||||| ||| |||||||||||||    
T  1350312 tataagctgttttcataaactatcctgaagagcttatgaaaa 1350271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 469 - 505
Target Start/End: Complemental strand, 31637743 - 31637707
Alignment:
Q  469 atatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  31637743 atattttaaaaactgaaaacaaaagctatttcaaaca 31637707  T

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Target: chr6 (Bit Score: 79; Significance: 1e-36; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 417 - 503
Target Start/End: Original strand, 2814890 - 2814976
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaa 503  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2814890 ggactaaaactaaaacatgtaaaatgataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 2814976  T

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Target: chr6; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 415 - 513
Target Start/End: Original strand, 26393987 - 26394085
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| || ||  ||||||||||||||||||||||||||||||||||| |||||||||    
T  26393987 gaggactaaaactaaaacatgtaaaatgataaatattgcgagaagaagatttttatatttcaaaaactgaaaacaaaaactatttcaaagaggctctta 26394085  T

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Target: chr6; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 417 - 510
Target Start/End: Original strand, 24640352 - 24640445
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctc 510  Q
    |||||||||||||||||| || || ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24640352 ggactaaaactaaaacatatagaaggataactattatgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaagaggctc 24640445  T

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Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 417 - 505
Target Start/End: Complemental strand, 444610 - 444522
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  444610 ggactaaaactaaaacatgtaataggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactattttaaaca 444522  T

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Target: chr6; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 418 - 513
Target Start/End: Original strand, 6200163 - 6200258
Alignment:
Q  418 gactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    |||||||||||||| |||||||| ||||||||||| |||||||| | ||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  6200163 gactaaaactaaaatatgtaaaaggataactattgtgagaagagaatttgtatatttcaaaaactgaaaacaaaaaatatttcaaacaggctctta 6200258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 417 - 511
Target Start/End: Complemental strand, 1067890 - 1067795
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatga-taactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||||| ||||| |  ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  1067890 ggactaaaactaaaacatataaaaagggtaactattgtgagaagagaacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaagctct 1067795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 421 - 506
Target Start/End: Complemental strand, 23774154 - 23774069
Alignment:
Q  421 taaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    |||||||||||||| ||||| ||||||||||  |||||||| ||||| |||||||||||| | |||| ||||||||||||||||||    
T  23774154 taaaactaaaacatataaaaggataactattatgagaagagaacttgtatatttcaaaaattaaaaataaaaactatttcaaacag 23774069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 511
Target Start/End: Complemental strand, 12324214 - 12324167
Alignment:
Q  464 cttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||    
T  12324214 cttgtatatttcaaaaactgaaaacaaaaactacttcaaacaggctct 12324167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 482
Target Start/End: Complemental strand, 34710199 - 34710135
Alignment:
Q  418 gactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaact 482  Q
    ||||||||||||||||| |||||  ||||||| || |||||||| ||||| ||||||||||||||    
T  34710199 gactaaaactaaaacatataaaagaataactactgtgagaagagaacttgtatatttcaaaaact 34710135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 425 - 487
Target Start/End: Original strand, 2993592 - 2993654
Alignment:
Q  425 actaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaa 487  Q
    ||||||| || ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||    
T  2993592 actaaaagatataaaaggataactattgtgagaagagaacttgtatatttcaaaaactaaaaa 2993654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 417 - 466
Target Start/End: Original strand, 4032327 - 4032376
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggactt 466  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  4032327 ggactaaaactaaaacatataaaaagataactattgtgagaagatgactt 4032376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 417 - 511
Target Start/End: Complemental strand, 35929796 - 35929702
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  35929796 ggactaaaactaaaacatataaaatgataactattgtgagaagaggacttatatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 35929702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 423 - 505
Target Start/End: Original strand, 56100144 - 56100226
Alignment:
Q  423 aaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  56100144 aaactaaaacatgtaaaaggataactattgcgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 56100226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 417 - 509
Target Start/End: Original strand, 36609413 - 36609506
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactg-aaaacaaaaactatttcaaacaggct 509  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  36609413 ggactaaaactaaaacatgtaaaaggataactattgtgagaagaggatttgtatatttcaaaaactgaaaaacaaaaactatttcaaacaggct 36609506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 417 - 504
Target Start/End: Complemental strand, 21555469 - 21555382
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaac 504  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| |||||  ||||||||||||||||||||||||||||||||||||    
T  21555469 ggactaaaactaaaacatgtaaaaggataactattgtgagaagaagacttatatatttcaaaaactgaaaacaaaaactatttcaaac 21555382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 417 - 511
Target Start/End: Complemental strand, 23249559 - 23249465
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| |||| ||||||||||||| ||||||||||| | |||||||||||||||    
T  23249559 ggactaaaactaaaacatgtaaaaggataactattgtgagaagagggcttgtatatttcaaaaaccgaaaacaaaaattgtttcaaacaggctct 23249465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 504
Target Start/End: Complemental strand, 12701129 - 12701040
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaac 504  Q
    ||||||||||||||||||||||||||  ||||||||||  |||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  12701129 gaggactaaaactaaaacatgtaaaagaataactattgtaagaagaagacttgtatatttcaaaaactgaaaacaaaaactatttcaaac 12701040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 418 - 495
Target Start/End: Complemental strand, 827917 - 827840
Alignment:
Q  418 gactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaact 495  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |||||||||||||    
T  827917 gactaaaactaaaacatgtaaaaagataactattgtgagaagaggacttgtatatttcaaaaaccgaaaacaaaaact 827840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 19598456 - 19598361
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctt 512  Q
    |||||||||||||||||||||||| || |||||||  ||||| | |||||| ||||||| |||||||||||||||||||||||||||||| |||||    
T  19598456 ggactaaaactaaaacatgtaaaaagaaaactattttgagaaaatgacttgtatatttcgaaaactgaaaacaaaaactatttcaaacagactctt 19598361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 415 - 514
Target Start/End: Complemental strand, 27733467 - 27733375
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctcttac 514  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||       ||||||||||||||||||||||||||||||    
T  27733467 gaggactaaaactaaaacatgtaaaaggataactattgtgagaagaggtcttgtatatttcaa-------aaacaaaaactatttcaaacaggctcttac 27733375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 417 - 511
Target Start/End: Original strand, 44243696 - 44243790
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    ||||||||| |||||||| ||||| |||||||||||  |||||| |||||| |||||||||||||| |||||||||  |||||||||||||||||    
T  44243696 ggactaaaattaaaacatataaaaggataactattgtaagaagatgacttgtatatttcaaaaactaaaaacaaaatttatttcaaacaggctct 44243790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 422 - 505
Target Start/End: Complemental strand, 41842871 - 41842789
Alignment:
Q  422 aaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    ||||||||||||||||||| |||||| |||| ||||| |||| ||| ||||||||||||| |||||||||||||||||||||||    
T  41842871 aaaactaaaacatgtaaaa-gataacaattgtgagaaaaggatttgtatatttcaaaaaccgaaaacaaaaactatttcaaaca 41842789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 418 - 506
Target Start/End: Complemental strand, 35749473 - 35749385
Alignment:
Q  418 gactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacag 506  Q
    ||||||||||||||||| ||||| ||||| ||||  ||||||| |||||| |||||||||||| |||||| ||||| ||||||||||||    
T  35749473 gactaaaactaaaacatataaaaagataattattatgagaagatgacttgtatatttcaaaaattgaaaataaaaattatttcaaacag 35749385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 454 - 511
Target Start/End: Original strand, 53584603 - 53584660
Alignment:
Q  454 gagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  53584603 gagaagatgacttgtatatttcaaaaactgaaaacaaaaactatttcaaacatgctct 53584660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 1404414 - 1404457
Alignment:
Q  74 acttataagttgttttcataaactatcatgaggagcttatgaaa 117  Q
    |||||||||| |||||||||||||||||||  ||||||||||||    
T  1404414 acttataagtggttttcataaactatcatggagagcttatgaaa 1404457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 28615334 - 28615375
Alignment:
Q  77 tataagttgttttcataaactatcatgaggagcttatgaaaa 118  Q
    |||||||||||||||||| |||| |||| |||||||||||||    
T  28615334 tataagttgttttcataagctataatgaagagcttatgaaaa 28615375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 417 - 457
Target Start/End: Original strand, 53583471 - 53583511
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgaga 457  Q
    |||||||||||||||||||||||| ||| ||||||| ||||    
T  53583471 ggactaaaactaaaacatgtaaaaggattactattgtgaga 53583511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 417 - 509
Target Start/End: Complemental strand, 39002036 - 39001944
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggct 509  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39002036 ggactaaaactaaaacatgtaaaaggataactattgcaaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggct 39001944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 415 - 513
Target Start/End: Original strand, 6750308 - 6750406
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    |||||||||||||||||||||||||| ||||||||||| || ||  ||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6750308 gaggactaaaactaaaacatgtaaaaagataactattgtgaaaaagggatttgtatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 6750406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 417 - 509
Target Start/End: Complemental strand, 11121946 - 11121854
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggct 509  Q
    |||||||||||||||||||||||||||||||||||| | ||||| |||||| ||||||||||||||||||||||||||||||  |||||||||    
T  11121946 ggactaaaactaaaacatgtaaaatgataactattgtgcgaagatgacttgtatatttcaaaaactgaaaacaaaaactattataaacaggct 11121854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 417 - 507
Target Start/End: Complemental strand, 3695495 - 3695405
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacagg 507  Q
    |||||||||||||||||||||||||||||||||||  || ||| ||||||| ||||||||||||| |||||||||||||||||||||||||    
T  3695495 ggactaaaactaaaacatgtaaaatgataactattatgaaaaggggacttgtatatttcaaaaaccgaaaacaaaaactatttcaaacagg 3695405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 419 - 511
Target Start/End: Original strand, 41998881 - 41998973
Alignment:
Q  419 actaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||| ||||| ||||| ||||| ||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  41998881 actaaaactaaaacatataaaaagataaatattgtgagaagaagacttgtatatttcaaaaaatgaaaacaaaaactatttcaaacaggctct 41998973  T

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Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 422 - 513
Target Start/End: Complemental strand, 571731 - 571640
Alignment:
Q  422 aaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    ||||||||||||||||||||||||||||||  ||||||||||| |  ||||||||||||||||||||||||||||||||||| |||| ||||    
T  571731 aaaactaaaacatgtaaaatgataactattatgagaagaggacgtatatatttcaaaaactgaaaacaaaaactatttcaaagaggccctta 571640  T

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Target: chr1; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 422 - 505
Target Start/End: Complemental strand, 794997 - 794914
Alignment:
Q  422 aaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||| || ||||||||||||||||||||||||| |||||||||||    
T  794997 aaaactaaaacatgtaaaaggataactattgtgagaagaagacctgtatatttcaaaaactgaaaacaaaaaatatttcaaaca 794914  T

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Target: chr1; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 422 - 513
Target Start/End: Original strand, 26653945 - 26654036
Alignment:
Q  422 aaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctctta 513  Q
    |||| |||||||||||||| |||||| |||| ||||||||||| || |||||||||||| ||||||||||||||||||||||||||| ||||    
T  26653945 aaaattaaaacatgtaaaaggataaccattgtgagaagaggacctgtatatttcaaaaattgaaaacaaaaactatttcaaacaggccctta 26654036  T

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Target: chr1; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 417 - 503
Target Start/End: Complemental strand, 18808867 - 18808781
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaa 503  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||| |||||| |||||||| |||||||||||||||| |||||||||    
T  18808867 ggactaaaactaaaacatataaaaggataactattgtgagaagaagacttgtatatttcataaactgaaaacaaaaattatttcaaa 18808781  T

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Target: chr1; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 419 - 511
Target Start/End: Original strand, 24909510 - 24909602
Alignment:
Q  419 actaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||| |||| |||||||| ||||||||||| |||||||| ||| | |||||| |||||||||||| |||||||||||||||||||||||    
T  24909510 actaaaacgaaaatatgtaaaaggataactattgtgagaagagaactagtatattttaaaaactgaaaataaaaactatttcaaacaggctct 24909602  T

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Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 417 - 485
Target Start/End: Complemental strand, 36290680 - 36290612
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaa 485  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||    
T  36290680 ggactaaaactaaaacatgtaaaatgataactattgtcagaagaggacttgtatatttcaaaaactgaa 36290612  T

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Target: chr1; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 428 - 511
Target Start/End: Complemental strand, 1585938 - 1585855
Alignment:
Q  428 aaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    ||||||||||||| |||||||||||  |||||| |||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  1585938 aaaacatgtaaaaggataactattgtaagaagaagacttgtatatttcaaaaactaaaaacataaactatttcaaacaggctct 1585855  T

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Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 422 - 513
Target Start/End: Original strand, 44272362 - 44272454
Alignment:
Q  422 aaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaa-actgaaaacaaaaactatttcaaacaggctctta 513  Q
    |||||||||||||||||||| ||||| |||  || ||||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||||    
T  44272362 aaaactaaaacatgtaaaataataaccattatgaaaagagaacttgtatatttcaaaaaactgaaaacaaaaactatttcaaacaagctctta 44272454  T

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Target: chr1; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 442 - 509
Target Start/End: Original strand, 4792593 - 4792660
Alignment:
Q  442 gataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggct 509  Q
    ||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||||| |||||||||    
T  4792593 gataactattgtgagaagagaacttgtatatttcaaaaactaaaaacaaaaactattttaaacaggct 4792660  T

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Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 470 - 505
Target Start/End: Original strand, 9224877 - 9224912
Alignment:
Q  470 tatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    ||||||||||||||||||||||||||||||||||||    
T  9224877 tatttcaaaaactgaaaacaaaaactatttcaaaca 9224912  T

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Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 479
Target Start/End: Original strand, 7409823 - 7409885
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaa 479  Q
    |||||||||||||||||||||||| ||||||||||  |||||||| |||   |||||||||||    
T  7409823 ggactaaaactaaaacatgtaaaaggataactattatgagaagagaactattatatttcaaaa 7409885  T

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Target: scaffold0302 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 415 - 511
Target Start/End: Original strand, 18501 - 18597
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctct 511  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  18501 gaggactaaaactaaaacatgtaaaaggataactattgtgagaagatgacttgtatatttcaaaaactaaaaccaaaaactatttcaaacaggctct 18597  T

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Target: scaffold0121 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 417 - 509
Target Start/End: Original strand, 37403 - 37495
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggct 509  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||| |||||    
T  37403 ggactaaaactaaaatatgtaaaatgataactattgcgagaagaggacttgtatatttcaaaaaccgaaaacaaacactatttcaaataggct 37495  T

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Target: scaffold0025 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 419 - 510
Target Start/End: Complemental strand, 67959 - 67868
Alignment:
Q  419 actaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggctc 510  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  67959 actaaaactaaaacatgtaaaaggataactattgttagaagaggacttgtatattttaaaaactgaaaacaaaaattatttcaaacaggctc 67868  T

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Target: scaffold0140 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 417 - 509
Target Start/End: Complemental strand, 21565 - 21473
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaacaggct 509  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| || ||  ||||||||||||||||||||||||||| |||||||||||||    
T  21565 ggactaaaactaaaacatgtaaaataataactattgtgagaagatgatttatatatttcaaaaactgaaaacaaaaactgtttcaaacaggct 21473  T

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Target: scaffold0532 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 417 - 505
Target Start/End: Complemental strand, 11408 - 11320
Alignment:
Q  417 ggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaaca 505  Q
    |||||||||| ||||||||| ||| |||||||| |  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11408 ggactaaaacaaaaacatgttaaaggataactactctgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaca 11320  T

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Target: scaffold1248 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 415 - 504
Target Start/End: Complemental strand, 1059 - 970
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaac 504  Q
    |||||||||||||||||||| |||||  ||||||||| |||||| | |||||| |||||| |||||||||||||||||||||||||||||    
T  1059 gaggactaaaactaaaacatataaaagaataactattacgagaaaaagacttgtatattttaaaaactgaaaacaaaaactatttcaaac 970  T

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Target: scaffold0952 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 415 - 504
Target Start/End: Original strand, 1254 - 1343
Alignment:
Q  415 gaggactaaaactaaaacatgtaaaatgataactattgcgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaac 504  Q
    |||||||||||||||||||| |||||  ||||||||| |||||| | |||||| |||||| |||||||||||||||||||||||||||||    
T  1254 gaggactaaaactaaaacatataaaagaataactattacgagaaaaagacttgtatattttaaaaactgaaaacaaaaactatttcaaac 1343  T

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