View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7832_low_15 (Length: 452)

Name: NF7832_low_15
Description: NF7832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7832_low_15
NF7832_low_15
[»] chr7 (30 HSPs)
chr7 (259-435)||(6590848-6591024)
chr7 (24-169)||(6591123-6591268)
chr7 (259-435)||(4579562-4579738)
chr7 (259-431)||(23246802-23246974)
chr7 (283-421)||(16372472-16372609)
chr7 (261-372)||(44423065-44423176)
chr7 (259-361)||(9008217-9008319)
chr7 (259-372)||(12799464-12799577)
chr7 (270-371)||(27238307-27238408)
chr7 (270-361)||(23866133-23866224)
chr7 (270-372)||(4930298-4930400)
chr7 (259-361)||(12254133-12254235)
chr7 (259-361)||(26341253-26341355)
chr7 (270-361)||(44510616-44510707)
chr7 (275-372)||(42626519-42626616)
chr7 (270-361)||(13314175-13314266)
chr7 (270-361)||(25543301-25543392)
chr7 (270-419)||(30258165-30258310)
chr7 (270-361)||(26287084-26287175)
chr7 (272-369)||(10388298-10388395)
chr7 (270-371)||(3880063-3880161)
chr7 (270-331)||(8076115-8076176)
chr7 (270-343)||(8268358-8268431)
chr7 (273-419)||(13142786-13142928)
chr7 (270-360)||(9650904-9650997)
chr7 (259-421)||(3357514-3357673)
chr7 (293-353)||(21671283-21671343)
chr7 (259-359)||(29150988-29151088)
chr7 (295-347)||(45748595-45748647)
chr7 (270-372)||(3284792-3284895)
[»] chr2 (28 HSPs)
chr2 (271-434)||(19094360-19094524)
chr2 (259-372)||(9180652-9180765)
chr2 (259-372)||(9189731-9189844)
chr2 (289-428)||(32079463-32079602)
chr2 (270-361)||(19892405-19892496)
chr2 (270-372)||(29677446-29677548)
chr2 (270-419)||(1934878-1935023)
chr2 (270-372)||(12796990-12797092)
chr2 (259-361)||(18344485-18344587)
chr2 (259-361)||(30650983-30651085)
chr2 (259-361)||(30658317-30658419)
chr2 (259-419)||(31326793-31326948)
chr2 (270-371)||(25497255-25497355)
chr2 (259-372)||(29677821-29677934)
chr2 (259-361)||(10160664-10160765)
chr2 (259-370)||(25478228-25478338)
chr2 (271-360)||(35601988-35602077)
chr2 (271-340)||(35638957-35639026)
chr2 (270-361)||(7737790-7737881)
chr2 (270-372)||(21523653-21523750)
chr2 (291-403)||(27414981-27415092)
chr2 (261-360)||(7734655-7734753)
chr2 (270-371)||(17545227-17545328)
chr2 (270-343)||(42926716-42926789)
chr2 (259-330)||(40847565-40847636)
chr2 (295-361)||(28603393-28603459)
chr2 (270-361)||(19578353-19578444)
chr2 (293-361)||(30618951-30619019)
[»] scaffold0184 (1 HSPs)
scaffold0184 (271-435)||(2374-2538)
[»] chr5 (36 HSPs)
chr5 (259-406)||(12103079-12103222)
chr5 (257-372)||(6514529-6514644)
chr5 (259-361)||(556749-556851)
chr5 (259-361)||(561521-561623)
chr5 (259-419)||(35679761-35679916)
chr5 (270-361)||(32461488-32461579)
chr5 (259-361)||(26667326-26667428)
chr5 (259-361)||(26938923-26939025)
chr5 (259-361)||(29167912-29168014)
chr5 (259-361)||(36428763-36428865)
chr5 (259-361)||(36937450-36937552)
chr5 (259-361)||(36942204-36942306)
chr5 (270-361)||(12501838-12501929)
chr5 (270-372)||(41587090-41587190)
chr5 (259-361)||(36423691-36423793)
chr5 (270-361)||(6155358-6155449)
chr5 (270-361)||(39518475-39518566)
chr5 (270-361)||(39523114-39523205)
chr5 (259-361)||(7451812-7451914)
chr5 (259-361)||(12041871-12041973)
chr5 (259-361)||(3665986-3666088)
chr5 (271-357)||(4871988-4872074)
chr5 (259-372)||(37248724-37248836)
chr5 (259-372)||(10759749-10759861)
chr5 (272-361)||(11981219-11981308)
chr5 (270-361)||(12045078-12045169)
chr5 (270-361)||(40147960-40148051)
chr5 (270-361)||(42001499-42001585)
chr5 (270-371)||(20180992-20181093)
chr5 (270-361)||(41996730-41996816)
chr5 (355-404)||(25839892-25839941)
chr5 (270-360)||(16116189-16116279)
chr5 (347-435)||(17158453-17158541)
chr5 (351-394)||(15148832-15148875)
chr5 (292-348)||(9911239-9911295)
chr5 (270-372)||(12102762-12102861)
[»] chr8 (27 HSPs)
chr8 (270-372)||(36683644-36683746)
chr8 (271-379)||(17953793-17953902)
chr8 (259-381)||(15875587-15875709)
chr8 (270-371)||(18876296-18876397)
chr8 (270-361)||(31449805-31449896)
chr8 (270-372)||(19166699-19166801)
chr8 (259-361)||(40125824-40125926)
chr8 (270-399)||(18259899-18260027)
chr8 (270-371)||(23548561-23548662)
chr8 (259-372)||(44925852-44925964)
chr8 (259-406)||(1807526-1807670)
chr8 (270-361)||(17026000-17026091)
chr8 (270-361)||(17556492-17556583)
chr8 (270-369)||(33416612-33416710)
chr8 (270-372)||(2965695-2965797)
chr8 (270-421)||(1910852-1910999)
chr8 (277-361)||(43302630-43302714)
chr8 (271-372)||(38182165-38182266)
chr8 (269-361)||(10933496-10933587)
chr8 (342-434)||(17793596-17793688)
chr8 (259-361)||(34118520-34118622)
chr8 (270-338)||(12820404-12820472)
chr8 (259-361)||(28559593-28559695)
chr8 (305-361)||(4238280-4238336)
chr8 (305-361)||(4243019-4243075)
chr8 (271-360)||(15951494-15951584)
chr8 (270-302)||(43302716-43302748)
[»] chr4 (40 HSPs)
chr4 (259-419)||(31269088-31269244)
chr4 (270-435)||(42758620-42758785)
chr4 (270-419)||(31273586-31273731)
chr4 (259-419)||(37259762-37259918)
chr4 (259-361)||(8693765-8693867)
chr4 (259-419)||(37264449-37264605)
chr4 (270-419)||(19102042-19102187)
chr4 (270-361)||(48276588-48276679)
chr4 (259-372)||(31729315-31729428)
chr4 (270-361)||(5271358-5271449)
chr4 (270-361)||(19541100-19541191)
chr4 (259-372)||(51697971-51698083)
chr4 (270-419)||(47244313-47244458)
chr4 (259-361)||(5928158-5928260)
chr4 (270-372)||(13059475-13059576)
chr4 (259-361)||(16421083-16421185)
chr4 (273-361)||(33463295-33463383)
chr4 (337-419)||(39217274-39217356)
chr4 (270-361)||(32082030-32082121)
chr4 (270-419)||(55251784-55251929)
chr4 (270-372)||(4551062-4551164)
chr4 (271-361)||(47574691-47574781)
chr4 (270-361)||(8030415-8030506)
chr4 (270-361)||(12878304-12878394)
chr4 (322-419)||(19106725-19106818)
chr4 (270-372)||(16948066-16948168)
chr4 (259-317)||(31765940-31765998)
chr4 (259-361)||(33468912-33469014)
chr4 (270-371)||(2819909-2820010)
chr4 (270-360)||(13521929-13522022)
chr4 (342-435)||(16954438-16954532)
chr4 (272-348)||(12874606-12874682)
chr4 (290-397)||(9362416-9362523)
chr4 (270-361)||(19906316-19906406)
chr4 (283-339)||(29985660-29985715)
chr4 (294-428)||(40840417-40840547)
chr4 (290-348)||(40408284-40408342)
chr4 (270-303)||(12823892-12823925)
chr4 (289-361)||(8649569-8649641)
chr4 (289-361)||(8661376-8661448)
[»] chr3 (35 HSPs)
chr3 (259-361)||(18472059-18472161)
chr3 (259-419)||(758253-758409)
chr3 (270-372)||(3657168-3657270)
chr3 (259-361)||(39775667-39775769)
chr3 (259-372)||(55431367-55431480)
chr3 (270-361)||(6596296-6596387)
chr3 (259-361)||(3672638-3672740)
chr3 (259-361)||(3692670-3692772)
chr3 (259-419)||(23661349-23661505)
chr3 (259-419)||(23666008-23666164)
chr3 (259-419)||(24038256-24038412)
chr3 (270-372)||(27708999-27709101)
chr3 (259-372)||(3419047-3419160)
chr3 (259-372)||(14438623-14438736)
chr3 (270-361)||(7571157-7571248)
chr3 (259-361)||(3033696-3033798)
chr3 (259-419)||(18467277-18467433)
chr3 (270-372)||(32474608-32474710)
chr3 (259-372)||(29350292-29350405)
chr3 (259-372)||(49971352-49971465)
chr3 (270-361)||(8069742-8069833)
chr3 (270-361)||(8883233-8883324)
chr3 (271-361)||(8887994-8888084)
chr3 (259-419)||(20507705-20507865)
chr3 (270-370)||(20520117-20520217)
chr3 (271-361)||(12971572-12971662)
chr3 (270-361)||(12965812-12965903)
chr3 (290-419)||(46964098-46964223)
chr3 (292-419)||(2207634-2207757)
chr3 (278-369)||(55325847-55325938)
chr3 (270-361)||(12112580-12112671)
chr3 (270-333)||(29715707-29715770)
chr3 (296-361)||(25726727-25726792)
chr3 (270-335)||(28940126-28940191)
chr3 (270-359)||(47567136-47567225)
[»] scaffold0352 (1 HSPs)
scaffold0352 (259-406)||(7158-7301)
[»] scaffold0008 (1 HSPs)
scaffold0008 (259-379)||(255871-255991)
[»] scaffold0002 (2 HSPs)
scaffold0002 (259-361)||(4128-4230)
scaffold0002 (259-372)||(443874-443985)
[»] chr1 (23 HSPs)
chr1 (270-372)||(16649541-16649643)
chr1 (259-403)||(38620746-38620886)
chr1 (259-372)||(8137993-8138106)
chr1 (270-373)||(19798940-19799043)
chr1 (270-372)||(25843821-25843923)
chr1 (270-372)||(33301108-33301210)
chr1 (261-373)||(11806415-11806527)
chr1 (259-354)||(51041409-51041504)
chr1 (259-373)||(10135510-10135624)
chr1 (261-361)||(23192757-23192856)
chr1 (270-361)||(47451164-47451255)
chr1 (271-435)||(25779183-25779345)
chr1 (259-361)||(26927661-26927763)
chr1 (271-343)||(16035674-16035746)
chr1 (270-361)||(16833549-16833640)
chr1 (271-335)||(47455351-47455415)
chr1 (270-361)||(39588306-39588397)
chr1 (305-361)||(3094188-3094244)
chr1 (259-343)||(10140143-10140227)
chr1 (259-361)||(18784496-18784590)
chr1 (259-348)||(40166034-40166123)
chr1 (270-342)||(5346728-5346800)
chr1 (270-310)||(8900319-8900359)
[»] scaffold0011 (2 HSPs)
scaffold0011 (328-435)||(146299-146406)
scaffold0011 (274-332)||(155486-155544)
[»] scaffold0182 (1 HSPs)
scaffold0182 (259-361)||(9826-9928)
[»] scaffold0057 (1 HSPs)
scaffold0057 (259-353)||(35688-35782)
[»] chr6 (26 HSPs)
chr6 (259-372)||(17964487-17964600)
chr6 (270-361)||(24589103-24589194)
chr6 (271-361)||(14509050-14509140)
chr6 (259-372)||(12689025-12689138)
chr6 (276-372)||(11534639-11534735)
chr6 (276-372)||(11560149-11560245)
chr6 (270-403)||(29892162-29892291)
chr6 (259-361)||(8747836-8747938)
chr6 (261-363)||(16836093-16836195)
chr6 (270-372)||(33687531-33687633)
chr6 (270-419)||(2699992-2700136)
chr6 (270-361)||(6407800-6407890)
chr6 (259-419)||(11570634-11570790)
chr6 (270-372)||(20748213-20748314)
chr6 (259-372)||(4157297-4157410)
chr6 (273-433)||(15991609-15991767)
chr6 (273-433)||(15999271-15999429)
chr6 (270-333)||(21309096-21309159)
chr6 (270-371)||(12406282-12406383)
chr6 (259-343)||(22695228-22695312)
chr6 (278-361)||(22609641-22609724)
chr6 (270-370)||(19995333-19995433)
chr6 (259-353)||(11614039-11614133)
chr6 (280-370)||(25316494-25316583)
chr6 (280-370)||(26203988-26204077)
chr6 (274-361)||(13736617-13736704)
[»] scaffold0015 (1 HSPs)
scaffold0015 (270-431)||(8955-9117)
[»] scaffold0045 (1 HSPs)
scaffold0045 (259-361)||(83120-83222)
[»] scaffold0054 (2 HSPs)
scaffold0054 (270-361)||(29220-29311)
scaffold0054 (270-372)||(25464-25566)
[»] scaffold0012 (1 HSPs)
scaffold0012 (259-361)||(166025-166127)
[»] scaffold2020 (1 HSPs)
scaffold2020 (270-369)||(436-541)
[»] scaffold0009 (1 HSPs)
scaffold0009 (270-369)||(164954-165059)
[»] scaffold1050 (1 HSPs)
scaffold1050 (270-361)||(1205-1296)
[»] scaffold0128 (1 HSPs)
scaffold0128 (270-344)||(13337-13411)
[»] scaffold0240 (2 HSPs)
scaffold0240 (257-302)||(4043-4088)
scaffold0240 (324-372)||(4092-4140)


Alignment Details
Target: chr7 (Bit Score: 145; Significance: 4e-76; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 259 - 435
Target Start/End: Complemental strand, 6591024 - 6590848
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||    
T  6591024 tgcaaggcagactatcaaccacgccgccttcaggataaaacaagttcagttataactgtgtgattaactactacattgtagaaaatcgtttgagaattac 6590925  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggtactatgaccattctatt 435  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6590924 accctcaaatatggctattaaggccactcgaatttaatactgaaaccattattatatggtactataaccattctatt 6590848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 6591268 - 6591123
Alignment:
Q  24 tttaaaatatatccttttatcattaaaccatattcttgcggttattctctattgcatttttattttgaattaattaaatgcattagagaagaaaatctaa 123  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6591268 tttaaaatatatccttttatcattaaaccatattctttcggttattctctattgcatttttattttgaattaattaaatgcattagagaagaaaatctac 6591169  T
Q  124 atacaatcacaggcatataatccattacttactagtttaagtgtag 169  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  6591168 atacaatcacatgcatataatccattacttactagtttaagtgtag 6591123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 259 - 435
Target Start/End: Original strand, 4579562 - 4579738
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| ||||||||| ||||  ||||||||    
T  4579562 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgtgcgattaactactgcactgtagaaaaccgttcaagaattac 4579661  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggtactatgaccattctatt 435  Q
    ||||| ||||||||||||||||| |||||||| |||||| ||||||||  ||||||||||| | |||||||||||||    
T  4579662 accctcaaatatggctattaaggccactcgaaattaataatgaaaccacgattatatggtattgtgaccattctatt 4579738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 259 - 431
Target Start/End: Complemental strand, 23246974 - 23246802
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||||||||  || ||||||| ||||  | ||||||    
T  23246974 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcacctacaactgtgcgattaactactgttttatagaaaaccgttccaaaattac 23246875  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggtactatgaccattc 431  Q
    ||||| |||||||||||| |||| |||||| |||||||| |||||||| ||||||||||||||| ||||||||    
T  23246874 accctcaaatatggctataaaggccactcggatttaatattgaaaccactattatatggtactaagaccattc 23246802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 421
Target Start/End: Original strand, 16372472 - 16372609
Alignment:
Q  283 cgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatatggctattaaggt 382  Q
    ||||| || |||||||||||| |  ||||| || || ||||||||||| || ||||||||||||||||||||||| ||| | |||||||||||||||||     
T  16372472 cgcctccaagataaaacaagtgcgactaca-ctatgcgattaactacttcactgtagaaaatcgtttgagaattaaaccatcaaatatggctattaaggc 16372570  T
Q  383 cactcgaatttaatactgaaaccattattatatggtact 421  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  16372571 cactcgaatttaatactgaaaccactattatatggtact 16372609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 261 - 372
Target Start/End: Complemental strand, 44423176 - 44423065
Alignment:
Q  261 caaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacac 360  Q
    |||||||  |||||||| ||||||||| ||||||||||||||| || ||||||||||| | |||||||||||| ||||||||| |||| |||||||||||    
T  44423176 caaggcagactatcaactacgccgcctccaggataaaacaagtccatctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacac 44423077  T
Q  361 ccttaaatatgg 372  Q
    ||| ||||||||    
T  44423076 cctcaaatatgg 44423065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 9008217 - 9008319
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    ||||||||| |||||||| || |  |||| ||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  9008217 tgcaaggcaggctatcaatcatgaagcctccaggataaaacaagtccaactacaactgtgtgattaactactgcactgtagaaaatcgttcgagaattac 9008316  T
Q  359 acc 361  Q
    |||    
T  9008317 acc 9008319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 372
Target Start/End: Original strand, 12799464 - 12799577
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||| | | |||||||||| |||| |||||||||||||| | ||||||||||||||| |||||| |||| |||||||||    
T  12799464 tgcaaggcagactatcaaccacgccacatccaggataaaataagtccagctacaactgtgcggttaactactgcattgcagaaaaccgttcgagaattac 12799563  T
Q  359 acccttaaatatgg 372  Q
    ||||| ||||||||    
T  12799564 accctcaaatatgg 12799577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 270 - 371
Target Start/End: Original strand, 27238307 - 27238408
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    ||||||| |||||||||| || |||||||||||| |||||||||||| ||| |||||||||||| |||||||||||||| |||| ||||||||| |||||    
T  27238307 ctatcaatcacgccgcctgcaagataaaacaagtccagctacaactgcgtgcttaactactgcactgtagaaaatcgttcgagatttacaccctcaaata 27238406  T
Q  370 tg 371  Q
    ||    
T  27238407 tg 27238408  T

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Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 23866133 - 23866224
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||| | |||||||||||| ||||||||| |||| ||||||||||||    
T  23866133 ctatcaaccacgccgcctccaggataaaacaagctcagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc 23866224  T

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Target: chr7; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 4930298 - 4930400
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| ||||||||||||||  || ||||||||||| | |||||||||||| ||||||||| |||| |||||||||||||| | |||    
T  4930298 ctatcaaccacgccgcctccaggataaaacaagcccaactacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcatata 4930397  T
Q  370 tgg 372  Q
    |||    
T  4930398 tgg 4930400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 12254133 - 12254235
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  ||||||| |||||||||| |||||||||||||||||||||||||||||| | ||||||| |||  ||||||||| ||||||||| ||||    
T  12254133 tgcaaggcagactatcaatcacgccgcctacaggataaaacaagttcagctacaactgtgcggttaactaatgctgtgtagaaaaccgtttgagatttac 12254232  T
Q  359 acc 361  Q
    |||    
T  12254233 acc 12254235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 26341253 - 26341355
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||||  ||||||||||| || ||||||||||| ||  ||||||||    
T  26341253 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgttcgattaactactacactgtagaaaatcattcaagaattac 26341352  T
Q  359 acc 361  Q
    |||    
T  26341353 acc 26341355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 44510707 - 44510616
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||| | |||||| ||||| ||||||||| |||| ||||||||||||    
T  44510707 ctatcaaccacgccgcctccaggataaaacaagctcagctgcaactgtgcggttaacttctgcactgtagaaaaccgttcgagaattacacc 44510616  T

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Target: chr7; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 275 - 372
Target Start/End: Complemental strand, 42626616 - 42626519
Alignment:
Q  275 aaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatatgg 372  Q
    ||||| ||||||  |||||||||| |||| |||||||||||||| | |||| ||||||| |||||||||||||| |||||||||||||| ||||||||    
T  42626616 aaccatgccgccgccaggataaaataagtccagctacaactgtgcggttaattactgcactgtagaaaatcgttcgagaattacaccctcaaatatgg 42626519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 13314266 - 13314175
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||| ||||| ||||| |||||||||||||| ||||||||||||||   ||||||||||||| ||||||||| |||| ||||||||||||    
T  13314266 ctatcagccacgtcgcctccaggataaaacaagctcagctacaactgttcaattaactactgcactgtagaaaaccgttcgagaattacacc 13314175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 25543392 - 25543301
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||  ||||| |||||||||||||||  ||||||||||||| | |||||||||||| ||||||||| |||| ||||||||||||    
T  25543392 ctatcaaccacatcgcctccaggataaaacaagtctagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc 25543301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 419
Target Start/End: Original strand, 30258165 - 30258310
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    ||||||| |||||||||| ||||||||||||||| |||||||||| ||| | |||||||||||| |||||||||| ||| || | ||||||| | |||||    
T  30258165 ctatcaatcacgccgcctccaggataaaacaagtccagctacaacagtgcggttaactactgcactgtagaaaattgttcgaaatttacaccttcaaata 30258264  T
Q  370 tggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||| || ||||  |||||   |||||||||||||||| | | ||||||||    
T  30258265 tgg-tactaagaccactc---tttaatactgaaaccactttaatatggta 30258310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 26287175 - 26287084
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||||   |||||||||||| | |||||||||||| |||  |||||||    
T  26287175 ctatcaaccacgccgcctccaggataaaacaaatccagctacaactgtgcagttaactactgcactatagaaaatcgttcgagctttacacc 26287084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 369
Target Start/End: Complemental strand, 10388395 - 10388298
Alignment:
Q  272 atcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||| ||||||||| |||||||||||||  ||| ||||||||||| |||||||||||||| | || ||||| ||| |||| ||||||||| |||||    
T  10388395 atcaacaacgccgcctccaggataaaacaaactcaactacaactgtgcgattaactactgcactctaaaaaattgttcgagatttacaccctcaaata 10388298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 371
Target Start/End: Original strand, 3880063 - 3880161
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| ||||||||||   |  |  |||||||| |||| |||||||||||| |||||||||||||| ||||||||||| || |||||    
T  3880063 ctatcaaccacgccgcctccaggataaaa---gccccactacaactatgtggttaactactgcactgtagaaaatcgttcgagaattacactctcaaata 3880159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 331
Target Start/End: Original strand, 8076115 - 8076176
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactg 331  Q
    ||||||||||||| |||| |||||||||||||| |||||| |||||||| ||||||||||||    
T  8076115 ctatcaaccacgctgcctccaggataaaacaagctcagctgcaactgtgcgattaactactg 8076176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 343
Target Start/End: Original strand, 8268358 - 8268431
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaa 343  Q
    |||||||||||||| ||| || |||||||||||| |||||||||||||  ||||||||||||||  ||||||||    
T  8268358 ctatcaaccacgccacctccatgataaaacaagtccagctacaactgttcgattaactactgcaccgtagaaaa 8268431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 419
Target Start/End: Complemental strand, 13142928 - 13142786
Alignment:
Q  273 tcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatatgg 372  Q
    ||||| ||||||||  |||||||||||||||||||||||||||||  |  |||||| |||| | |||||||  ||| |||| ||||||| ||||||||||    
T  13142928 tcaacaacgccgccaccaggataaaacaagttcagctacaactgtaaggctaactattgcactatagaaaactgttcgagatttacaccgttaaatatgg 13142829  T
Q  373 ctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
     || |||| ||||||   ||||||| |||||||| | | ||||||||    
T  13142828 -tactaagatcactc---tttaatattgaaaccactttaatatggta 13142786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 360
Target Start/End: Complemental strand, 9650997 - 9650904
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctac---aactgtgtgattaactactgcattgtagaaaatcgtttgagaattacac 360  Q
    |||||||||||||||||| ||||||||||||||| ||||| |   ||||||  | || ||||||||| ||||||||| |||| |||||||||||    
T  9650997 ctatcaaccacgccgcctccaggataaaacaagtccagctgctgcaactgtacggttgactactgcactgtagaaaaccgttcgagaattacac 9650904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 421
Target Start/End: Complemental strand, 3357673 - 3357514
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaa-caagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaatta 357  Q
    |||||||||  ||||||||||||||| || || ||||||| |||   || |||||| |||||| ||||| | |||| ||||||||||||||  ||| |||    
T  3357673 tgcaaggcagactatcaaccacgccgtctccatgataaaaacaaacacaactacaattgtgtggttaaccattgcactgtagaaaatcgttcaagattta 3357574  T
Q  358 cacccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggtact 421  Q
    |||||| |||||||| || |||| ||||||   |||||||| ||||||| | | ||||||||||    
T  3357573 caccctaaaatatgg-tactaagatcactc---tttaataccgaaaccactttaatatggtact 3357514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 353
Target Start/End: Original strand, 21671283 - 21671343
Alignment:
Q  293 ataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgaga 353  Q
    |||||||||| ||| ||||||||||| | |||||||||||| |||||||||||||| ||||    
T  21671283 ataaaacaagctcacctacaactgtgcggttaactactgcagtgtagaaaatcgttcgaga 21671343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 359
Target Start/End: Original strand, 29150988 - 29151088
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||| ||||| || ||||||| ||||||||||||||||  | | ||||||  |||||| ||||| | ||||||||| ||||    
T  29150988 tgcaaggcaaactatcaaccacgtcgcctccaagataaaataagttcagctacaactacgcgcttaacttttgcattatagaagaccgtttgagatttac 29151087  T
Q  359 a 359  Q
    |    
T  29151088 a 29151088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 45748647 - 45748595
Alignment:
Q  295 aaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgt 347  Q
    |||||||||||| |||||||| || |||||||||||||| |||||||||||||    
T  45748647 aaaacaagttcaactacaactatgcgattaactactgcactgtagaaaatcgt 45748595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 3284792 - 3284895
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaa-caagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaat 368  Q
    ||||||||||| ||| ||||| ||||||| |||  ||||||||||| ||| | |||||||| |||   ||||||| |||| |||||||||||||| ||||    
T  3284792 ctatcaaccacaccgtcttcatgataaaaacaaactcagctacaaccgtgcggttaactaccgcacaatagaaaaccgttcgagaattacaccctcaaat 3284891  T
Q  369 atgg 372  Q
    ||||    
T  3284892 atgg 3284895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 5e-57; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 271 - 434
Target Start/End: Complemental strand, 19094524 - 19094360
Alignment:
Q  271 tatcaaccacgccgccttcaggataaaa-caagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||| |||||| |||||||||| |||| ||||||||||||||| |||||| ||||||| ||||||||| |||| |||||||||||||| |||||    
T  19094524 tatcaaccacaccgcctccaggataaaaacaagctcagctacaactgtgcgattaattactgcactgtagaaaaccgttcgagaattacaccctcaaata 19094425  T
Q  370 tggctattaaggtcactcgaatttaatactgaaaccattattatatggtactatgaccattctat 434  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19094424 tggctattaaggccactccaatttaatactgaaaccattattatatggtactatgaccattctat 19094360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 9180765 - 9180652
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  9180765 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtttgattaactactgcactgtagaaaatcgttcgagaattac 9180666  T
Q  359 acccttaaatatgg 372  Q
    ||||| ||||||||    
T  9180665 accctcaaatatgg 9180652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 9189844 - 9189731
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  9189844 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtttgattaactactgcactgtagaaaatcgttcgagaattac 9189745  T
Q  359 acccttaaatatgg 372  Q
    ||||| ||||||||    
T  9189744 accctcaaatatgg 9189731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 289 - 428
Target Start/End: Original strand, 32079463 - 32079602
Alignment:
Q  289 caggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatatggctattaaggtcactcg 388  Q
    |||||||||| | ||||||||||||||||| ||||||||| |||||| |||  ||||||| ||||||||||||||||||||||||||||||||| | |||    
T  32079463 caggataaaaaaggttcagctacaactgtgcgattaactattgcattatagctaatcgttcgagaattacacccttaaatatggctattaaggtaattcg 32079562  T
Q  389 aatttaatactgaaaccattattatatggtactatgacca 428  Q
    ||||||| | ||||| |||| | |||||||| | ||||||    
T  32079563 aatttaacattgaaatcattttaatatggtattgtgacca 32079602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 19892496 - 19892405
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||| ||||||||||||    
T  19892496 ctatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattacacc 19892405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 29677446 - 29677548
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||| | |||||||||||| ||||||||| |||| |||||||||||||| |||||    
T  29677446 ctatcaaccacgccgcctccaggataaaataagtccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaata 29677545  T
Q  370 tgg 372  Q
    |||    
T  29677546 tgg 29677548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 419
Target Start/End: Complemental strand, 1935023 - 1934878
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| ||||||||||||||  ||||| |||||||| | ||||||| |||| ||||||||| |||| |||||||||||||| |||||    
T  1935023 ctatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaatgcactgtagaaaaccgttcgagaattacaccctcaaata 1934924  T
Q  370 tggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||| || ||||  |||||   |||||||||||||||| | | ||||||||    
T  1934923 tgg-tactaagaccactc---tttaatactgaaaccactttaatatggta 1934878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 12796990 - 12797092
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    ||||||||||||||| || ||||||||||||||| | |||||||||||| | ||||||||||||  |||||||| |||| |||||||||||||| |||||    
T  12796990 ctatcaaccacgccgtctccaggataaaacaagtccggctacaactgtgcggttaactactgcaccgtagaaaaccgttcgagaattacaccctcaaata 12797089  T
Q  370 tgg 372  Q
    |||    
T  12797090 tgg 12797092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 18344485 - 18344587
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||| |||||||||| || ||||||||||||||  |||||||||||||  |||||||||||||| |||||||||||||| |||||||||    
T  18344485 tgcaaggcagactattaaccacgccggctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattac 18344584  T
Q  359 acc 361  Q
    |||    
T  18344585 acc 18344587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 30650983 - 30651085
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| || |||||||||||  |||||||||||||  ||||||||||||||  ||||||||||||| |||||||||    
T  30650983 tgcaaggcagactatcaaccacgccgcctccaagataaaacaagcccagctacaactgttcgattaactactgcaccgtagaaaatcgttcgagaattac 30651082  T
Q  359 acc 361  Q
    |||    
T  30651083 acc 30651085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 30658317 - 30658419
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  ||||| |||||||| | |||||||||||| ||||||||| |||| |||||||||    
T  30658317 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattac 30658416  T
Q  359 acc 361  Q
    |||    
T  30658417 acc 30658419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 259 - 419
Target Start/End: Original strand, 31326793 - 31326948
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||| ||| ||||||||||||||  || ||||||||||| |||||||||||||| | ||||||| |||| |||||||||    
T  31326793 tgcaaggcagactatcaaccacgccacctccaggataaaacaagcccaactacaactgtgcgattaactactgcact-tagaaaaccgttcgagaattac 31326891  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||||| |||||||| || ||||  ||||   ||||||||||||||||| | | ||||||||    
T  31326892 accctcaaatatgg-tactaagaccact---atttaatactgaaaccactttaatatggta 31326948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 270 - 371
Target Start/End: Complemental strand, 25497355 - 25497255
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||||| | ||||||| |||| ||||||||| |||| |||||||||||||| |||||    
T  25497355 ctatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttaacta-tgcactgtagaaaaccgttcgagaattacaccctcaaata 25497257  T
Q  370 tg 371  Q
    ||    
T  25497256 tg 25497255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 259 - 372
Target Start/End: Original strand, 29677821 - 29677934
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||| ||||||| |||||||||| |||  |||||||||||||| | |||||||||||| ||||||||| |||| |||||||||    
T  29677821 tgcaaggcaaactatcaaccaagccgcctacaggataaaaaaagcccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattac 29677920  T
Q  359 acccttaaatatgg 372  Q
    ||||  ||||||||    
T  29677921 acccacaaatatgg 29677934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 10160765 - 10160664
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| |||||||||||||| |||||| |||||||| | ||||||| |||| ||||||||| |||| |||||||||    
T  10160765 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctgcaactgtgcggttaacta-tgcactgtagaaaaccgttcgagaattac 10160667  T
Q  359 acc 361  Q
    |||    
T  10160666 acc 10160664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 370
Target Start/End: Complemental strand, 25478338 - 25478228
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||| ||||||||||  |||||||||||||| || |||||| |||| ||||||||| ||||  ||||||||    
T  25478338 tgcaaggcagactatcaaccacgccgcctccagaataaaacaagcccagctacaactgtgcgaataacta-tgcactgtagaaaaccgttcaagaattac 25478240  T
Q  359 acccttaaatat 370  Q
    ||||| ||||||    
T  25478239 accctcaaatat 25478228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 35601988 - 35602077
Alignment:
Q  271 tatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacac 360  Q
    ||||||||||||||||| |||||||||||||   ||||||||| |||  |||||||||||||| ||||||||| |||| |||||||||||    
T  35601988 tatcaaccacgccgcctccaggataaaacaaacccagctacaattgttcgattaactactgcactgtagaaaaccgttcgagaattacac 35602077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 340
Target Start/End: Complemental strand, 35639026 - 35638957
Alignment:
Q  271 tatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtaga 340  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||| ||||||    
T  35639026 tatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactactgcactgtaga 35638957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 7737881 - 7737790
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| ||||||||||||||  || |||||| |||  ||||||||| |||| ||||||||| |||| ||||||||||||    
T  7737881 ctatcaaccacgccgcctccaggataaaacaagcccaactacaattgttcgattaactattgcactgtagaaaaccgttcgagaattacacc 7737790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 372
Target Start/End: Complemental strand, 21523750 - 21523653
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||| |  ||| ||||||||||||||||||||||||| | ||||||||     |||||||||||||| |||| ||||||||| |||||    
T  21523750 ctatcaaccacgccgcttctaggttaaaacaagttcagctacaactgtgcggttaactac-----tgtagaaaatcgttcgagatttacaccctcaaata 21523656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 403
Target Start/End: Complemental strand, 27415092 - 27414981
Alignment:
Q  291 ggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatatggctattaaggtcactcgaa 390  Q
    |||| ||||||||| ||| ||||||||| |||| |||||||  ||||||  || |||||| |||||||||| | ||||||| ||||||||| ||||| ||    
T  27415092 ggatgaaacaagtttagcgacaactgtgcgatttactactgt-ttgtagttaaccgtttgtgaattacaccatcaaatatgactattaaggccactcaaa 27414994  T
Q  391 tttaatactgaaa 403  Q
    |||||||||||||    
T  27414993 tttaatactgaaa 27414981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 261 - 360
Target Start/End: Original strand, 7734655 - 7734753
Alignment:
Q  261 caaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacac 360  Q
    |||| |||||||||||||||| |||||  |||| |||||||||||| |||||| | | ||||||| | |||||||||||  |||||||||||||||||||    
T  7734655 caagacatgctatcaaccacgtcgcctctaggaaaaaacaagttcaactacaattctatgattaa-ttctgcattgtagctaatcgtttgagaattacac 7734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 371
Target Start/End: Complemental strand, 17545328 - 17545227
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||| |||  |||||||||||||  || ||||||| ||| | |||||||  ||||||||||||||| || |||| ||||||||| |||||    
T  17545328 ctatcaaccacgccacctcgaggataaaacaagcacatctacaacagtgcggttaactaacgcattgtagaaaatcattcgagatttacaccctcaaata 17545229  T
Q  370 tg 371  Q
    ||    
T  17545228 tg 17545227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 343
Target Start/End: Complemental strand, 42926789 - 42926716
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaa 343  Q
    |||||||||||||||||| |||||||| ||||| ||| ||||||||||| | ||||||||||||  ||||||||    
T  42926789 ctatcaaccacgccgcctccaggataatacaagctcaactacaactgtgcggttaactactgcaccgtagaaaa 42926716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 330
Target Start/End: Complemental strand, 40847636 - 40847565
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactact 330  Q
    |||||||||  |||||||||||||| ||| | ||||||||||||| || ||||||||||||| |||||||||    
T  40847636 tgcaaggcaaactatcaaccacgccacctcctggataaaacaagtccaactacaactgtgtggttaactact 40847565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 28603393 - 28603459
Alignment:
Q  295 aaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||||||||  |||||||||||||| |||| |||| ||||  |||||||||||    
T  28603393 aaaacaagttcagctacaactgttcgattaactactgcactgtaaaaaaccgttcaagaattacacc 28603459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 19578444 - 19578353
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||| || |||| |||| |||||||||| || |||||| || | | ||||||| |||| |||||||||||||| |||| |||||||    
T  19578444 ctatcaaccatgctgcctccagggtaaaacaagtccaactacaattgggcggttaactattgcactgtagaaaatcgttcgagatttacacc 19578353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 361
Target Start/End: Original strand, 30618951 - 30619019
Alignment:
Q  293 ataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||| | | ||| |||| || |||||  ||||||||||||||||||| || ||||||||||||    
T  30618951 ataaaacaagcttacctataactatgcgattagttactgcattgtagaaaatcattcgagaattacacc 30619019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 271 - 435
Target Start/End: Original strand, 2374 - 2538
Alignment:
Q  271 tatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatat 370  Q
    |||||||||||||||||  || |||||||||  |||| |||||||||| ||||||||||||||  ||||||||| ||| |||||||||||||||||||||    
T  2374 tatcaaccacgccgcctctagtataaaacaaactcaggtacaactgtgagattaactactgcaccgtagaaaattgttggagaattacacccttaaatat 2473  T
Q  371 ggctattaaggtcactcgaatttaatactgaaaccattattatatggtactatgaccattctatt 435  Q
    | ||||||||| ||||| ||||||||| |||||||| ||  |||||||| | |||||||||||||    
T  2474 gtctattaaggccactcaaatttaatattgaaaccactaaaatatggtattgtgaccattctatt 2538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 4e-36; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 259 - 406
Target Start/End: Original strand, 12103079 - 12103222
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  || |||||| |||| |||||||||||||| |||||||||||||| |||||||||    
T  12103079 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccaactacaaatgtgcgattaactactgcactgtagaaaatcgttcgagaattac 12103178  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaacca 406  Q
    |||||||||||||| || |||| ||||||   ||||||||||||||||    
T  12103179 acccttaaatatgg-tactaagatcactc---tttaatactgaaacca 12103222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 257 - 372
Target Start/End: Complemental strand, 6514644 - 6514529
Alignment:
Q  257 tttgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaatt 356  Q
    |||||||||||  |||||||||||||||||| |||||||||||||| | ||||||||||||||| |||||||||||||||||||||||| || |||| ||    
T  6514644 tttgcaaggcagactatcaaccacgccgcctccaggataaaacaagcttagctacaactgtgtggttaactactgcattgtagaaaatcattcgagattt 6514545  T
Q  357 acacccttaaatatgg 372  Q
    ||||| | ||||||||    
T  6514544 acaccttcaaatatgg 6514529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 556749 - 556851
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||| ||||||||| |||| |||||||||    
T  556749 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattac 556848  T
Q  359 acc 361  Q
    |||    
T  556849 acc 556851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 561521 - 561623
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||| ||||||||| |||| |||||||||    
T  561521 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattac 561620  T
Q  359 acc 361  Q
    |||    
T  561621 acc 561623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 35679916 - 35679761
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| |||||||||||||| ||| |||||||||||   ||||||| ||||||||||||||||||| |||||||||    
T  35679916 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcaactacaactgtgcagttaacta-tgcattgtagaaaatcgttcgagaattac 35679818  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||||| |||||||| || ||||  |||||   |||||||||||||||| | | ||||||||    
T  35679817 accctcaaatatgg-tactaagaccactc---tttaatactgaaaccactttaatatggta 35679761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 32461579 - 32461488
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||| | |||||||||||| ||||||||| |||| ||||||||||||    
T  32461579 ctatcaaccacgccgcctccaggataaaacaagttcagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc 32461488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 26667326 - 26667428
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||| ||||| |||||||  |||||||||||||| | |||||||||||| |||||||||    
T  26667326 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgttcgattaactactgcactctagaaaatcgttcgagaattac 26667425  T
Q  359 acc 361  Q
    |||    
T  26667426 acc 26667428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 26938923 - 26939025
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||| ||||| |||||||  |||||||||||||| | |||||||||||| |||||||||    
T  26938923 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgttcgattaactactgcactctagaaaatcgttcgagaattac 26939022  T
Q  359 acc 361  Q
    |||    
T  26939023 acc 26939025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 29168014 - 29167912
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  || ||||||||||  |||||||||||||| |||||||||||||| |||||||||    
T  29168014 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcactgtagaaaatcgttcgagaattac 29167915  T
Q  359 acc 361  Q
    |||    
T  29167914 acc 29167912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 36428763 - 36428865
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  |||||||||||||  |||||||||||||| |||||||||||| | |||||||||    
T  36428763 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaatcgctcgagaattac 36428862  T
Q  359 acc 361  Q
    |||    
T  36428863 acc 36428865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 36937552 - 36937450
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  |||||||||||||  |||||||||||||| ||||||||| |||| |||||||||    
T  36937552 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattac 36937453  T
Q  359 acc 361  Q
    |||    
T  36937452 acc 36937450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 36942306 - 36942204
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  |||||||||||||  |||||||||||||| ||||||||| |||| |||||||||    
T  36942306 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattac 36942207  T
Q  359 acc 361  Q
    |||    
T  36942206 acc 36942204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 12501929 - 12501838
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||||  | |||||||||||| |||||||||||||| ||||||||||||    
T  12501929 ctatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcggttaactactgcactgtagaaaatcgttcgagaattacacc 12501838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 372
Target Start/End: Complemental strand, 41587190 - 41587090
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||| | |||||||||||| ||||||||| ||||   |||||||||||| |||||    
T  41587190 ctatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactactgcactgtagaaaaccgtt--cgaattacaccctcaaata 41587093  T
Q  370 tgg 372  Q
    |||    
T  41587092 tgg 41587090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 36423691 - 36423793
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||| ||||||||||  ||||||| ||||| |||||||||| |||| |||||||||||||| |||||||||    
T  36423691 tgcaaggcagactatcaaccacgccgcctccagaataaaacaagcccagctactactgtttgattaactaatgcactgtagaaaatcgttcgagaattac 36423790  T
Q  359 acc 361  Q
    |||    
T  36423791 acc 36423793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 6155449 - 6155358
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||||||| |||||| ||||||||||||||  |||||||||||||  |||||||||||||| ||||||||| |||| ||||||||||||    
T  6155449 ctatcaaccacaccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 6155358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 39518475 - 39518566
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| ||||||||||||||| ||||| |||||||| | |||||||||||| ||||||||| ||||  |||||||||||    
T  39518475 ctatcaaccacgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactactgcagtgtagaaaaccgttcaagaattacacc 39518566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 39523114 - 39523205
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| ||||||||||||||| ||||| |||||||| | |||||||||||| ||||||||| ||||  |||||||||||    
T  39523114 ctatcaaccacgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcaagaattacacc 39523205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 7451812 - 7451914
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  ||||||||||||| |||| |||||||||||||| |||||| |||||||| | ||||||||| || ||||||||| |||| |||||||||    
T  7451812 tgcaaggcagactatcaaccacgctgcctccaggataaaacaagctcagctgcaactgtgcggttaactactacactgtagaaaaccgttcgagaattac 7451911  T
Q  359 acc 361  Q
    |||    
T  7451912 acc 7451914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 12041973 - 12041871
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||||  |||||||||||||| | || ||||  ||| |||||||||    
T  12041973 tgcaaggcaaactatcaaccacgccgcctccaggataaaacaagtccagctacaactgttcgattaactactgcactataaaaaactgttcgagaattac 12041874  T
Q  359 acc 361  Q
    |||    
T  12041873 acc 12041871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 3665986 - 3666088
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||| |||  |||||||||||||| || ||||||||||| | |||||||||||| ||||||||| |||| | |||||||    
T  3665986 tgcaaggcagactatcaaccacgccacctctaggataaaacaagtccaactacaactgtgcggttaactactgcactgtagaaaaccgttcgggaattac 3666085  T
Q  359 acc 361  Q
    |||    
T  3666086 acc 3666088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 271 - 357
Target Start/End: Original strand, 4871988 - 4872074
Alignment:
Q  271 tatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaatta 357  Q
    ||||||||||||||||| || ||||||||||| ||| ||||||||||  |||||||||||| | ||||||||| |||||||||||||    
T  4871988 tatcaaccacgccgcctccatgataaaacaagctcaactacaactgttcgattaactactgtactgtagaaaaccgtttgagaatta 4872074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 37248836 - 37248724
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  ||||| |||||||| | |||| ||||| | | ||||||| |||| |||||||||    
T  37248836 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaa-tactgtactatagaaaaccgttcgagaattac 37248738  T
Q  359 acccttaaatatgg 372  Q
    ||||| ||||||||    
T  37248737 accctcaaatatgg 37248724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 10759861 - 10759749
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  ||  |||||||||| | ||||||| ||||  |||||||| |||| ||||||||     
T  10759861 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccatttacaactgtgcggttaacta-tgcacggtagaaaaccgttcgagaattat 10759763  T
Q  359 acccttaaatatgg 372  Q
    ||||| ||||||||    
T  10759762 accctcaaatatgg 10759749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 11981308 - 11981219
Alignment:
Q  272 atcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||| ||| ||||||||||  || ||||||||||  ||||||||| |||| ||||||||| |||| ||||||||||||    
T  11981308 atcaaccacgccgcctccagaataaaacaagcacatctacaactgttcgattaactattgcactgtagaaaaccgttcgagaattacacc 11981219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 12045169 - 12045078
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||| |||||||||||| ||||||||||||||   ||||||||||||| | |||||||||||| ||||||  | |||| ||||||||||||    
T  12045169 ctatcgaccacgccgcctccaggataaaacaagcatagctacaactgtgcggttaactactgcactgtagactaccgttcgagaattacacc 12045078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 40147960 - 40148051
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| |||||||||| ||| |||||| ||| |||   |||||||||| || ||||||||| |||| ||||||||||||    
T  40147960 ctatcaaccacgccgcctccaggataaaataagctcagcttcaattgttcaattaactactacactgtagaaaaccgttcgagaattacacc 40148051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 42001499 - 42001585
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||||| | ||||||||     ||||||||| |||| ||||||||||||    
T  42001499 ctatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttaactac-----tgtagaaaaccgttcgagaattacacc 42001585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 371
Target Start/End: Complemental strand, 20181093 - 20180992
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||| ||||||||| ||| || ||||||||||| ||| |||||| |||| | |||||||||||| |||||||||  ||| |||| ||||||||| |||||    
T  20181093 ctattaaccacgccacctccatgataaaacaagctcaactacaattgtgcggttaactactgcactgtagaaaactgttcgagatttacaccctcaaata 20180994  T
Q  370 tg 371  Q
    ||    
T  20180993 tg 20180992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 41996730 - 41996816
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| ||||||||||||||  || ||||||||||| | ||||||||     ||||||||| |||| ||||||||||||    
T  41996730 ctatcaaccacgccgcctccaggataaaacaagcccaactacaactgtgcggttaactac-----tgtagaaaaccgttcgagaattacacc 41996816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 404
Target Start/End: Complemental strand, 25839941 - 25839892
Alignment:
Q  355 ttacacccttaaatatggctattaaggtcactcgaatttaatactgaaac 404  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||||||||    
T  25839941 ttacaccctcaaatatggcaattaaggtcacttgaatttaatactgaaac 25839892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 360
Target Start/End: Complemental strand, 16116279 - 16116189
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacac 360  Q
    |||||||||||||| ||| |  ||||||||||||||| ||||||| ||    |||||||||||| | ||||||| |||| |||||||||||    
T  16116279 ctatcaaccacgccacctcctagataaaacaagttcaactacaacagtactgttaactactgcactatagaaaaccgttcgagaattacac 16116189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 435
Target Start/End: Original strand, 17158453 - 17158541
Alignment:
Q  347 tttgagaattacacccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggtactatgaccattctatt 435  Q
    ||||||||||||||||| |||||||| |||||||  || || ||||||||| |||||||| | | | |||||  |||||||||| ||||    
T  17158453 tttgagaattacaccctcaaatatggttattaagaccattcaaatttaatattgaaaccactctaacatggttatatgaccattttatt 17158541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 394
Target Start/End: Original strand, 15148832 - 15148875
Alignment:
Q  351 agaattacacccttaaatatggctattaaggtcactcgaattta 394  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||    
T  15148832 agaattacaccctaaaatatgactattaaggtcactcaaattta 15148875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 348
Target Start/End: Original strand, 9911239 - 9911295
Alignment:
Q  292 gataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtt 348  Q
    ||||||||||||||| |||||| |||| | |||| ||||||| ||||||||| ||||    
T  9911239 gataaaacaagttcaactacaattgtgcggttaattactgcactgtagaaaaccgtt 9911295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 372
Target Start/End: Complemental strand, 12102861 - 12102762
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    ||||||||||| ||| |  ||||||||||||||  || ||||||||||| | ||||||||| |   |||||||| |||||| || || |||||| |||||    
T  12102861 ctatcaaccacaccgtcaccaggataaaacaagaccaactacaactgtgcggttaactactac---gtagaaaaccgtttgggattttcaccctcaaata 12102765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 36683644 - 36683746
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    ||||||||||||| |||| |||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  36683644 ctatcaaccacgctgcctccaggataaaacaaggtcagctacatctgtgcgattaactactgcactgtagaaaatcgtttgagaattacaccctcaaata 36683743  T
Q  370 tgg 372  Q
    |||    
T  36683744 tgg 36683746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 271 - 379
Target Start/End: Complemental strand, 17953902 - 17953793
Alignment:
Q  271 tatcaaccacgccgccttcaggataaaacaagttcagctacaa-ctgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    ||||||||||||||||| || ||||||||||| ||| |||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| |||||    
T  17953902 tatcaaccacgccgcctccaagataaaacaagctcacctacaaactgtgtgattaactactgcactgtagaaaatcgttcgagaattacaccctcaaata 17953803  T
Q  370 tggctattaa 379  Q
    ||||||||||    
T  17953802 tggctattaa 17953793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 381
Target Start/End: Complemental strand, 15875709 - 15875587
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| |||||||||||||| |||||||||| |||  |||||||||||||| | ||||||| ||||  ||||||||    
T  15875709 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaattgtacgattaactactgcactatagaaaaccgttcaagaattac 15875610  T
Q  359 acccttaaatatggctattaagg 381  Q
    || || |||||||||||||||||    
T  15875609 actctcaaatatggctattaagg 15875587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 270 - 371
Target Start/End: Complemental strand, 18876397 - 18876296
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| |||||||||||||  ||| ||||||||||| | |||||||||||| ||||||||| |||| |||||||||||||| |||||    
T  18876397 ctatcaaccacgccgcctccaggataaaacaaactcatctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaata 18876298  T
Q  370 tg 371  Q
    ||    
T  18876297 tg 18876296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 31449896 - 31449805
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| ||||||||||||||| ||||| |||||||| | |||||||||||| ||||||||| |||| ||||||||||||    
T  31449896 ctatcaaccacgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc 31449805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 19166699 - 19166801
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||||||   |||||||||||| | ||||||| |||| |||||||||||||| |||||    
T  19166699 ctatcaaccacgccgcctccaggataaaacaagctcaactacaactgtgctgttaactactgcactatagaaaaccgttcgagaattacaccctcaaata 19166798  T
Q  370 tgg 372  Q
    |||    
T  19166799 tgg 19166801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 40125926 - 40125824
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| || |||||||||||  |||||||||||||  ||||||||||||||  ||||||||||||| |||||||||    
T  40125926 tgcaaggcagactatcaaccacgccgcctccaagataaaacaagcccagctacaactgttcgattaactactgcaccgtagaaaatcgttcgagaattac 40125827  T
Q  359 acc 361  Q
    |||    
T  40125826 acc 40125824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 270 - 399
Target Start/End: Original strand, 18259899 - 18260027
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||| || ||| ||||||||||||||||| |||||| ||||||||||  || ||  || |||  ||||||| |||||||||||||| |||||    
T  18259899 ctatcaaccacgtcgtctttaggataaaacaagttcaactacaa-tgtgtgattagttattgtgttatagctaatcgttcgagaattacaccctcaaata 18259997  T
Q  370 tggctattaaggtcactcgaatttaatact 399  Q
    || ||||||||| |||||||||||||||||    
T  18259998 tgcctattaaggccactcgaatttaatact 18260027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 270 - 371
Target Start/End: Complemental strand, 23548662 - 23548561
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||| |||||  ||||||||||||||||||||||||||| | | |||||||||||||||||||||| ||||  ||| || ||||||||||||    
T  23548662 ctatcaaccacgtcgcctctaggataaaacaagttcagctacaactgcgcggttaactactgcattgtagaaaaccgttcaagattttcacccttaaata 23548563  T
Q  370 tg 371  Q
    ||    
T  23548562 tg 23548561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 44925964 - 44925852
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| |||||||||||||| ||| |||||||| || | ||||||| |||| ||||||||| |||| |||||||||    
T  44925964 tgcaaggcagactatcaaccacgccgcctccaggataaaacaaggtcatctacaactatgcggttaacta-tgcactgtagaaaaccgttcgagaattac 44925866  T
Q  359 acccttaaatatgg 372  Q
    ||||| ||||||||    
T  44925865 accctcaaatatgg 44925852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 406
Target Start/End: Original strand, 1807526 - 1807670
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaa-caagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaatta 357  Q
    |||||||||  ||||||||||||||||||  ||||||||| ||||| |||||||||||||| | ||||||| |||| ||||||||| |||| |||| |||    
T  1807526 tgcaaggcagactatcaaccacgccgcctctaggataaaaacaagtccagctacaactgtgcggttaactagtgcactgtagaaaaccgttcgagattta 1807625  T
Q  358 cacccttaaatatggctattaaggtcactcgaatttaatactgaaacca 406  Q
    |||| | |||||||| || |||| ||||||   ||||||||||||||||    
T  1807626 caccttcaaatatgg-tactaagatcactc---tttaatactgaaacca 1807670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 17026000 - 17026091
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||| |||| ||||| |||||||||||||||  ||||||||||||  |||||||||||||| ||||||||| |||| ||||||||||||    
T  17026000 ctatcaatcacgtcgcctccaggataaaacaagtctagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 17026091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 17556492 - 17556583
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||| |||| ||||| |||||||||||||||  ||||||||||||  |||||||||||||| ||||||||| |||| ||||||||||||    
T  17556492 ctatcaatcacgtcgcctccaggataaaacaagtctagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 17556583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 369
Target Start/End: Original strand, 33416612 - 33416710
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| || |||||||||||  |||||||||||||| | ||||||| |||| ||||||||| |||| |||||||||||||| |||||    
T  33416612 ctatcaaccacgccgcctccaagataaaacaagcccagctacaactgtgcggttaacta-tgcactgtagaaaaccgttcgagaattacaccctcaaata 33416710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 2965695 - 2965797
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    ||||||||||| ||||||  |||||||||||||| ||||||||||| ||   |||||||||||| ||||||||| | ||||||| ||||||||| |||||    
T  2965695 ctatcaaccacaccgcctctaggataaaacaagtccagctacaactatgcagttaactactgcactgtagaaaaccatttgagatttacaccctcaaata 2965794  T
Q  370 tgg 372  Q
    |||    
T  2965795 tgg 2965797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 421
Target Start/End: Complemental strand, 1910999 - 1910852
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| | |||||||||||| ||||||||| | || |||| ||||||  | |||||    
T  1910999 ctatcaaccacgctgcctccagtataaaacaagctcaactacaactgtgcggttaactactgcactgtagaaaaccattcgagatttacacattcaaata 1910900  T
Q  370 tggctattaaggtcactcgaatttaatactgaaaccattattatatggtact 421  Q
    ||| |||||||  |||||   |||||||||||||||| | | ||||||||||    
T  1910899 tgg-tattaagaccactc---tttaatactgaaaccactttaatatggtact 1910852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 43302714 - 43302630
Alignment:
Q  277 ccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||||||| ||||||||||||||  ||||| || ||||| | |||||||||||| |||||||||||||| ||||||||||||    
T  43302714 ccacgccgcctccaggataaaacaagcccagctgcacctgtgcggttaactactgcactgtagaaaatcgttcgagaattacacc 43302630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 271 - 372
Target Start/End: Complemental strand, 38182266 - 38182165
Alignment:
Q  271 tatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatat 370  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||   |||||||||||| | || |||| |||| |||| ||||||| | ||||||    
T  38182266 tatcaaccacgccgcctccaggataaaacaagcacagctacaactgtgctgttaactactgcactataaaaaaccgttcgagatttacaccttcaaatat 38182167  T
Q  371 gg 372  Q
    ||    
T  38182166 gg 38182165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 361
Target Start/End: Original strand, 10933496 - 10933587
Alignment:
Q  269 gctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||||||||| ||||| || ||||||||||   || |||||||||||||||||||||||||| |||||| ||| ||| ||||||||||||    
T  10933496 gctatcaaccacgtcgcctccatgataaaacaaac-caactacaactgtgtgattaactactgcactgtagagaattgttcgagaattacacc 10933587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 434
Target Start/End: Original strand, 17793596 - 17793688
Alignment:
Q  342 aatcgtttgagaattacacccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggtactatgaccattctat 434  Q
    |||| |||||||||||||  |||| |||| ||||||||||||| ||||||||||||| ||||| ||||| |||||||| | |||||| |||||    
T  17793596 aatcctttgagaattacattcttagatatcgctattaaggtcattcgaatttaataccgaaactattataatatggtattgtgaccactctat 17793688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 34118520 - 34118622
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||| |||||| |||||||||||||  ||||||||||||||   ||||||||||||  ||||||||  ||| |||| ||||    
T  34118520 tgcaaggcagactatcaaccacgtcgcctttaggataaaacaagcccagctacaactgtgctgttaactactgcaccgtagaaaactgttcgagatttac 34118619  T
Q  359 acc 361  Q
    |||    
T  34118620 acc 34118622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 12820404 - 12820472
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgta 338  Q
    ||||||| ||| |||||| ||||||||||||||||||| |||||||||| || ||||||||||| ||||    
T  12820404 ctatcaatcacaccgcctccaggataaaacaagttcaggtacaactgtgcgactaactactgcactgta 12820472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 28559695 - 28559593
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  ||||||||||||||| || |||||||||| |||  ||| || ||||||  ||||||||| |||| |||| |||| |||| |||||||||    
T  28559695 tgcaaggcaaactatcaaccacgccgtctgcaggataaaataagcccagttagaactgttcgattaactattgcactgtaaaaaaccgttcgagaattac 28559596  T
Q  359 acc 361  Q
    |||    
T  28559595 acc 28559593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 361
Target Start/End: Complemental strand, 4238336 - 4238280
Alignment:
Q  305 cagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||  |||||||||||||| ||||||||| |||| ||||||||||||    
T  4238336 cagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 4238280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 361
Target Start/End: Complemental strand, 4243075 - 4243019
Alignment:
Q  305 cagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||  |||||||||||||| ||||||||| |||| ||||||||||||    
T  4243075 cagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 4243019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 15951584 - 15951494
Alignment:
Q  271 tatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgca--ttgtagaaaatcgtttgagaattacac 360  Q
    ||||||||||||||||| ||| ||||||||||  ||||||||||||||   ||||||||||||   ||||||||| |||| |||| ||||||    
T  15951584 tatcaaccacgccgcctccag-ataaaacaagcccagctacaactgtgcagttaactactgcactctgtagaaaaccgttcgagatttacac 15951494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 43302748 - 43302716
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaag 302  Q
    |||||||||||||||||| ||||||||||||||    
T  43302748 ctatcaaccacgccgcctccaggataaaacaag 43302716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 259 - 419
Target Start/End: Original strand, 31269088 - 31269244
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||| |||||||||| ||||| |||||||||||| ||||||||| |||| |||||||||    
T  31269088 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaaccgtgtggttaactactgcactgtagaaaaccgttcgagaattac 31269187  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||||| |||||||| || ||||  |||||   |||||||||||||||| | | ||||||||    
T  31269188 accctcaaatatgg-tactaagaccactc---tttaatactgaaaccactttaatatggta 31269244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 270 - 435
Target Start/End: Complemental strand, 42758785 - 42758620
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||| ||||| ||| ||||||| ||| ||   ||||||||| |||||||||||||| ||||||||| |||| |||||||||||||| |||||    
T  42758785 ctatcaaccacgtcgcctccagaataaaactagtccaaaaacaactgtgcgattaactactgcactgtagaaaaccgttcgagaattacaccctcaaata 42758686  T
Q  370 tggctattaaggtcactcgaatttaatactgaaaccattattatatggtactatgaccattctatt 435  Q
    |||||||||| | ||||  ||||| |||||||  ||| |||||||| ||||| |||||||||||||    
T  42758685 tggctattaaagccactttaatttgatactgaccccactattatatcgtactgtgaccattctatt 42758620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 270 - 419
Target Start/End: Original strand, 31273586 - 31273731
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||||||| |||||||||||| ||||||||| |||| |||||||||||||| |||||    
T  31273586 ctatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgtggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaata 31273685  T
Q  370 tggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||| || ||||  |||||   |||||||||||||||| | | ||||||||    
T  31273686 tgg-tactaagaccactc---tttaatactgaaaccactttaatatggta 31273731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 37259918 - 37259762
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  |||||||||||||| | |||||||||||| ||||||||| |||| |||||||||    
T  37259918 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattac 37259819  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||||| |||||||| || ||||  |||||   |||||||||||||||| | | ||||||||    
T  37259818 accctcaaatatgg-tactaagaccactc---tttaatactgaaaccactttaatatggta 37259762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 8693765 - 8693867
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||| ||| ||||||||||||||||||  ||||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||| |||||||||    
T  8693765 tgcaagacatactatcaaccacgccgcctcaaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattac 8693864  T
Q  359 acc 361  Q
    |||    
T  8693865 acc 8693867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 37264605 - 37264449
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  ||||||||| |||| | |||||||||||| ||||||||| |||| |||||||||    
T  37264605 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaattgtgcggttaactactgcactgtagaaaaccgttcgagaattac 37264506  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||||| |||||||| || ||||  |||||   |||||||||||||||| | | ||||||||    
T  37264505 accctcaaatatgg-tactaagaccactc---tttaatactgaaaccactttaatatggta 37264449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 270 - 419
Target Start/End: Original strand, 19102042 - 19102187
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||| ||||| ||||||||||||||| || ||||||||||| | |||||||||||| ||||||||| |||| |||||||||||||| |||||    
T  19102042 ctatcaaccacgtcgcctccaggataaaacaagtccaactacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaata 19102141  T
Q  370 tggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||| || ||||  |||||   ||||||||| |||||||| | ||||||||    
T  19102142 tgg-tactaagaccactc---tttaatactaaaaccattttaatatggta 19102187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 48276679 - 48276588
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||| ||||||||| | || ||||||||||||    
T  48276679 ctatcaaccacgccgcctccaggataaaacaagttcagctacaactgttcgattaactactgcactgtagaaaaccattcgagaattacacc 48276588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 31729428 - 31729315
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  | ||||| |||||||||| ||||||||||||||| ||||| |||||||| | |||||||||||| ||||||||| |||| |||||||||    
T  31729428 tgcaaggcagacaatcaatcacgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattac 31729329  T
Q  359 acccttaaatatgg 372  Q
    ||||| ||||||||    
T  31729328 accctcaaatatgg 31729315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 5271449 - 5271358
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| ||||||||||||||| || |||||||||| ||||| |||| |||| |||||||||||||| ||||||||||||    
T  5271449 ctatcaaccacgccgcctccaggataaaacaagtccaactacaactgtttgattcactattgcactgtagaaaatcgttcgagaattacacc 5271358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 19541191 - 19541100
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||||||||||||||  |||||||||||||| |||||||||| ||  |||||||||||||||||||||||| |||| ||||||||||||    
T  19541191 ctatcaaccacgccgcctataggataaaacaagtccagctacaacagttcgattaactactgcattgtagaaaaccgttcgagaattacacc 19541100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 259 - 372
Target Start/End: Original strand, 51697971 - 51698083
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| |||||||||||||| ||| |||||| |||| | ||||||| |||| ||||||||| |||| |||||||||    
T  51697971 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcaactacaattgtgcggttaacta-tgcactgtagaaaaccgttcgagaattac 51698069  T
Q  359 acccttaaatatgg 372  Q
    ||||| ||||||||    
T  51698070 accctcaaatatgg 51698083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 270 - 419
Target Start/End: Original strand, 47244313 - 47244458
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| ||||||||||||||  || ||||||||||| | |||||||||||| ||||||||| |||| |||||||| ||||  |||||    
T  47244313 ctatcaaccacgccgcctccaggataaaacaagcacaactacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattaaacccccaaata 47244412  T
Q  370 tggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||| || ||||  |||||   |||||||||||||||| | | ||||||||    
T  47244413 tgg-tactaagaccactc---tttaatactgaaaccactttaatatggta 47244458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 5928260 - 5928158
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  ||||||||||| |||||| ||||||||||||||  ||||| |||||||  |||||||||||||| ||||||||||||||  ||||||||    
T  5928260 tgcaaggcagactatcaaccacaccgcctccaggataaaacaagcccagctgcaactgttcgattaactactgcactgtagaaaatcgttcaagaattac 5928161  T
Q  359 acc 361  Q
    |||    
T  5928160 acc 5928158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 13059475 - 13059576
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    ||||||||||| ||||||  || |||||||||| ||||||||||||||||| |||||||||||||||||||||| |||| ||| |||||||| | |||||    
T  13059475 ctatcaaccactccgcctctagaataaaacaagctcagctacaactgtgtggttaactactgcattgtagaaaaccgttcgag-attacaccttcaaata 13059573  T
Q  370 tgg 372  Q
    |||    
T  13059574 tgg 13059576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 16421083 - 16421185
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  |||||||||||||| | |||||||||||| ||||||||| |||  |||| ||||    
T  16421083 tgcaaggcagactatcaaccacgccgcctacaggataaaacaagcccagctacaactgtgcggttaactactgcactgtagaaaaccgtccgagatttac 16421182  T
Q  359 acc 361  Q
    |||    
T  16421183 acc 16421185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 273 - 361
Target Start/End: Complemental strand, 33463383 - 33463295
Alignment:
Q  273 tcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||| |||||||| ||||||||||||||  || ||||||||||  |||||||||||||||||||||||| |||| ||||||||||||    
T  33463383 tcaaccccgccgcctccaggataaaacaagcacaactacaactgttcgattaactactgcattgtagaaaaccgttcgagaattacacc 33463295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 337 - 419
Target Start/End: Complemental strand, 39217356 - 39217274
Alignment:
Q  337 tagaaaatcgtttgagaattacacccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    |||||||||||| |||| ||||||||| ||| ||||||||||||  |||||||||||||||||||||||| | ||||||||||    
T  39217356 tagaaaatcgttcgagacttacaccctcaaacatggctattaagaccactcgaatttaatactgaaaccactgttatatggta 39217274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 32082121 - 32082030
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| |||||||||||||| |||| ||||| |||| | |||||||||||| ||||||||| | || |||| |||||||    
T  32082121 ctatcaaccacgccgcctccaggataaaacaagctcagttacaattgtgcggttaactactgcagtgtagaaaaccattcgagatttacacc 32082030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 419
Target Start/End: Original strand, 55251784 - 55251929
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||| ||| ||||||||||||||  || ||||||||||  | |||||||||||| ||||||||| |||| |||| ||||||| || ||||    
T  55251784 ctatcaaccacgccacctccaggataaaacaagcccaactacaactgtacggttaactactgcactgtagaaaaccgttcgagatttacacctttgaata 55251883  T
Q  370 tggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||| || ||||  |||||   |||||||||||||||| | | ||||||||    
T  55251884 tgg-tactaagaccactc---tttaatactgaaaccactttaatatggta 55251929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 4551062 - 4551164
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||| ||||||||| |||||||||||||  |||  ||||||| || |||||||||||||| ||||||||| ||||| ||| ||||||| | |||||    
T  4551062 ctatcaactacgccgcctccaggataaaacaaactcaattacaactctgcgattaactactgcactgtagaaaaccgtttaagatttacaccatcaaata 4551161  T
Q  370 tgg 372  Q
    |||    
T  4551162 tgg 4551164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 361
Target Start/End: Original strand, 47574691 - 47574781
Alignment:
Q  271 tatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||| |||||||| | ||||||||||||||| |||||||||||||| | |||||||||||  |||||||||  ||| ||||||||||||    
T  47574691 tatcaatcacgccgcatccaggataaaacaagtccagctacaactgtgcggttaactactgccatgtagaaaactgttcgagaattacacc 47574781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 8030506 - 8030415
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||| |||| |||| ||||||||||||||  ||||||||| |||  |||||||||||||| ||||||||| |||| || |||||||||    
T  8030506 ctatcaacaacgctgcctccaggataaaacaagcccagctacaaatgttcgattaactactgcactgtagaaaaccgttcgaaaattacacc 8030415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 12878304 - 12878394
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||| |||||| ||| ||| |||||||||||||||||||||||||||  |||| |||||||  |||||||| |||| ||||||||||||    
T  12878304 ctatcaatcacgccacctccagaataaaacaagttcagctacaactgtgttgttaattactgca-cgtagaaaaccgttcgagaattacacc 12878394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 322 - 419
Target Start/End: Original strand, 19106725 - 19106818
Alignment:
Q  322 ttaactactgcattgtagaaaatcgtttgagaattacacccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    |||||||||||| ||||||||| |||| |||||||||||||| |||||||| ||||||| ||||||   |||||||| ||||||||| | ||||||||    
T  19106725 ttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg-tattaagatcactc---tttaatacagaaaccattttaatatggta 19106818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 16948066 - 16948168
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||| ||||||||| ||||||||||||||||||   ||||||||| ||||||||||| || |||||  |||| ||  |||||||||||||  ||||    
T  16948066 ctatcaactacgccgcctccaggataaaacaagttcattgacaactgtgcgattaactactacactgtagctaatcattctagaattacaccctcgaata 16948165  T
Q  370 tgg 372  Q
    |||    
T  16948166 tgg 16948168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 31765940 - 31765998
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgt 317  Q
    |||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  31765940 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgt 31765998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 33469014 - 33468912
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  || ||||||||||| ||| || ||||||||||| |||||||||| |||  |||||||||||||| ||| ||| |  |||||||||||||    
T  33469014 tgcaaggcagactgtcaaccacgccacctccatgataaaacaagctcagctacaattgttcgattaactactgcactgttgaataaggtttgagaattac 33468915  T
Q  359 acc 361  Q
    |||    
T  33468914 acc 33468912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 371
Target Start/End: Original strand, 2819909 - 2820010
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    ||||| |||| ||||| | |||||||||||||||| |||||||||| ||  |||||||  |||| | |||||||||||| |||| ||||||||| |||||    
T  2819909 ctatctaccatgccgcgtccaggataaaacaagtttagctacaactatgcaattaactgttgcactatagaaaatcgttcgagatttacaccctcaaata 2820008  T
Q  370 tg 371  Q
    ||    
T  2820009 tg 2820010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 360
Target Start/End: Complemental strand, 13522022 - 13521929
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctac---aactgtgtgattaactactgcattgtagaaaatcgtttgagaattacac 360  Q
    |||||||||||||||||| ||||||||||||||| ||||| |   ||||||  | || ||||||||| ||||||||| |||| |||||||||||    
T  13522022 ctatcaaccacgccgcctccaggataaaacaagtccagctgctgcaactgtacggttgactactgcactgtagaaaaccgttcgagaattacac 13521929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 16954438 - 16954532
Alignment:
Q  342 aatcgtttgagaattacacccttaaatatggc-tattaaggtcactcgaatttaatactgaaaccattattatatggtactatgaccattctatt 435  Q
    |||| ||||||||||||||||| ||||||||| |||| | | ||||| ||||||||| |||||| | ||| |||||||||  |||||||||||||    
T  16954438 aatcatttgagaattacaccctcaaatatggcttattgaagccactcaaatttaatattgaaacaactataatatggtaccgtgaccattctatt 16954532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 12874606 - 12874682
Alignment:
Q  272 atcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtt 348  Q
    ||||| |||||||||| |||||||||||||| ||||||| || |||| | ||||||||| || ||||||||| ||||    
T  12874606 atcaatcacgccgcctccaggataaaacaagctcagctaaaattgtgcggttaactactacactgtagaaaaccgtt 12874682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 397
Target Start/End: Original strand, 9362416 - 9362523
Alignment:
Q  290 aggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatatggctattaaggtcactcga 389  Q
    ||||||||| |||| |||||| ||||||| |||||||||||||| | |||  || | ||  ||| ||||||  ||||||||||||||||||  ||||||     
T  9362416 aggataaaataagtccagctaaaactgtgcgattaactactgcactatagctaaccattcaagacttacacatttaaatatggctattaagaccactcgg 9362515  T
Q  390 atttaata 397  Q
    ||||||||    
T  9362516 atttaata 9362523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 19906316 - 19906406
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||||  |||||||| |||||||||||||| ||| |||||||||| ||| ||||||||||  | ||||||| |||| || |||||||||    
T  19906316 ctatcaactccgccgcctccaggataaaacaagctcaactacaactgtttga-taactactgcgctttagaaaaccgttcgaaaattacacc 19906406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 29985715 - 29985660
Alignment:
Q  283 cgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtag 339  Q
    ||||| ||||||||| ||||| ||||||||| | |||||||||||||||||||||||    
T  29985715 cgcctccaggataaa-caagtccagctacaagtttgtgattaactactgcattgtag 29985660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 428
Target Start/End: Original strand, 40840417 - 40840547
Alignment:
Q  294 taaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatatggctattaaggtcactcgaattt 393  Q
    |||||||| || | ||||||||||| ||||||| |||||| |  ||||||||||| |||||||||| |||  |||||| ||||||| |||||||   |||    
T  40840417 taaaacaaatttaactacaactgtgcgattaaccactgcact-aagaaaatcgttcgagaattaca-cctccaatatgactattaatgtcactc--tttt 40840512  T
Q  394 aatactgaaaccattattatatggtactatgacca 428  Q
    || |||||||||| |    ||||||||||||||||    
T  40840513 aaaactgaaaccaatcaattatggtactatgacca 40840547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 348
Target Start/End: Original strand, 40408284 - 40408342
Alignment:
Q  290 aggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtt 348  Q
    ||||||||||||||||| |||||| |||||| |||| ||||| | ||||||||| ||||    
T  40408284 aggataaaacaagttcaactacaattgtgtggttaattactgtactgtagaaaaccgtt 40408342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 12823925 - 12823892
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagt 303  Q
    |||||||||||||||||| |||||||||||||||    
T  12823925 ctatcaaccacgccgcctccaggataaaacaagt 12823892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 8649641 - 8649569
Alignment:
Q  289 caggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||||||||||   | ||||||||||| | ||||||||| || |||||||||  ||| ||||||||||||    
T  8649641 caggataaaacaagcctaactacaactgtgcggttaactactacactgtagaaaactgttcgagaattacacc 8649569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 8661448 - 8661376
Alignment:
Q  289 caggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||||||||||   | ||||||||||| | ||||||||| || |||||||||  ||| ||||||||||||    
T  8661448 caggataaaacaagcctaactacaactgtgcggttaactactacactgtagaaaactgttcgagaattacacc 8661376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 5e-32; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 18472059 - 18472161
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  18472059 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcattgtagaaaatcgttcgagaattac 18472158  T
Q  359 acc 361  Q
    |||    
T  18472159 acc 18472161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 758409 - 758253
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  ||||| |||||||| | |||||||||||| ||||||||| |||| |||||||||    
T  758409 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattac 758310  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||||| |||||||| || ||||  |||||   |||||||||||||||| | | ||||||||    
T  758309 accctcaaatatgg-tactaagaccactc---tttaatactgaaaccactttaatatggta 758253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 270 - 372
Target Start/End: Complemental strand, 3657270 - 3657168
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||| ||| ||| || |||||||||||| |||||||||||||  |||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  3657270 ctatcaaccatgccacctccaagataaaacaagtccagctacaactgttagattaactactgcactgtagaaaatcgttcgagaattacacccttaaata 3657171  T
Q  370 tgg 372  Q
    |||    
T  3657170 tgg 3657168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 39775769 - 39775667
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||| || ||||||    
T  39775769 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaatcgttcgaaaattac 39775670  T
Q  359 acc 361  Q
    |||    
T  39775669 acc 39775667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 259 - 372
Target Start/End: Original strand, 55431367 - 55431480
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||||| | |||||||||||| |||||||||  ||| ||||||| |    
T  55431367 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgtgcggttaactactgcactgtagaaaactgttcgagaattgc 55431466  T
Q  359 acccttaaatatgg 372  Q
    ||||| ||||||||    
T  55431467 accctcaaatatgg 55431480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 6596387 - 6596296
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| |||||||||||||| |||||||||| | |||| |||||||||||||||||||||| |||| ||||||||||||    
T  6596387 ctatcaaccacgccgcctccaggataaaacaagctcagctacaattatgtggttaactactgcattgtagaaaaccgttcgagaattacacc 6596296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 3672638 - 3672740
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  |||||||||||||  |||||||||||||| ||||||||| |||| |||||||||    
T  3672638 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattac 3672737  T
Q  359 acc 361  Q
    |||    
T  3672738 acc 3672740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 3692670 - 3692772
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  |||||||||||||  |||||||||||||| ||||||||| |||| |||||||||    
T  3692670 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattac 3692769  T
Q  359 acc 361  Q
    |||    
T  3692770 acc 3692772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 23661505 - 23661349
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  ||||| |||||||| | ||||||| |||| ||||||||| |||| |||||||||    
T  23661505 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaatgcactgtagaaaaccgttcgagaattac 23661406  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||||| |||||||| || ||||  |||||   |||||||||||||||| | | ||||||||    
T  23661405 accctcaaatatgg-tactaagaccactc---tttaatactgaaaccactttaatatggta 23661349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 23666164 - 23666008
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  ||||| |||||||| | ||||||| |||| ||||||||| |||| |||||||||    
T  23666164 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaatgcactgtagaaaaccgttcgagaattac 23666065  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||||| |||||||| || ||||  |||||   |||||||||||||||| | | ||||||||    
T  23666064 accctcaaatatgg-tactaagaccactc---tttaatactgaaaccactttaatatggta 23666008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 24038412 - 24038256
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  ||||| |||||||| | ||||||| |||| ||||||||| |||| |||||||||    
T  24038412 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaatgcactgtagaaaaccgttcgagaattac 24038313  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||||| |||||||| || ||||  |||||   |||||||||||||||| | | ||||||||    
T  24038312 accctcaaatatgg-tactaagaccactc---tttaatactgaaaccactttaatatggta 24038256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 27708999 - 27709101
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| ||||||||||||||  ||||| |||||||| | |||||||||||| ||||||||| |||| |||||||||||||| |||||    
T  27708999 ctatcaaccacgccgcctccaggataaaacaagcccagcttcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaata 27709098  T
Q  370 tgg 372  Q
    |||    
T  27709099 tgg 27709101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 372
Target Start/End: Original strand, 3419047 - 3419160
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||| |||||||||||||||||| ||| || |||||||| | ||||||| ||||| |||||||| ||||||||| ||||    
T  3419047 tgcaaggcagactatcaaccacgccaccttcaggataaaacaagctcaactgcaactgtgcggttaactattgcatcgtagaaaaccgtttgagatttac 3419146  T
Q  359 acccttaaatatgg 372  Q
    ||||| ||||||||    
T  3419147 accctcaaatatgg 3419160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 14438736 - 14438623
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  | |||||||||||||||| ||||||||||||||  ||||| |||||||| | |||||||||||| ||||||||| |||| |||||||||    
T  14438736 tgcaaggcagacaatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattac 14438637  T
Q  359 acccttaaatatgg 372  Q
    ||||| ||||||||    
T  14438636 accctcaaatatgg 14438623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 7571248 - 7571157
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||| |||||||||| |||||||||||||| ||||||||||||||| | |||||||||||| ||||||||| |||| ||||||||||||    
T  7571248 ctatcaatcacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc 7571157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 3033696 - 3033798
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  ||||||||||| ||||||  ||||||||||||| ||||||||||||||  |||||||||||||| ||||||||| |||| |||||||||    
T  3033696 tgcaaggcagactatcaaccacaccgcctcaaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattac 3033795  T
Q  359 acc 361  Q
    |||    
T  3033796 acc 3033798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 259 - 419
Target Start/End: Original strand, 18467277 - 18467433
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||| ||||||||||||| ||||||||||||||| || |||||| |||  |||||||||||||| |||||||||||||| |||||||||    
T  18467277 tgcaaggcagactattaaccacgccgcctccaggataaaacaagtccaactacaattgttcgattaactactgcactgtagaaaatcgttcgagaattac 18467376  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||    |||||||| || ||||  |||||   |||||||||||||||||| | ||||||||    
T  18467377 acttccaaatatgg-tactaagaccactc---tttaatactgaaaccattttaatatggta 18467433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 270 - 372
Target Start/End: Complemental strand, 32474710 - 32474608
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    ||||||||||||||| || ||||||||||||||  |||||||||||||  |||||||||||||| |||||||||||||| |||||||| |||  ||||||    
T  32474710 ctatcaaccacgccgtctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattatacctctaaata 32474611  T
Q  370 tgg 372  Q
    |||    
T  32474610 tgg 32474608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 259 - 372
Target Start/End: Original strand, 29350292 - 29350405
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  | ||| |||| ||||||| |||||||||||||| ||| ||||||||||||| |||| ||||||| ||||||||| |||| |||||||||    
T  29350292 tgcaaggcagaccatctaccatgccgcctccaggataaaacaagctcaactacaactgtgtggttaattactgcactgtagaaaaccgttcgagaattac 29350391  T
Q  359 acccttaaatatgg 372  Q
    ||||| ||||||||    
T  29350392 accctcaaatatgg 29350405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 49971465 - 49971352
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  ||||||| |||||||||| ||||||||||||||| ||||| ||||||||   ||||||||| || ||||||||| |||| |||||||||    
T  49971465 tgcaaggcagactatcaatcacgccgcctccaggataaaacaagtccagctgcaactgtgcagttaactacttcactgtagaaaaccgttcgagaattac 49971366  T
Q  359 acccttaaatatgg 372  Q
    ||||| ||||||||    
T  49971365 accctcaaatatgg 49971352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 8069742 - 8069833
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| ||||||||||||||  ||||| |||||||| | |||||||||||| |||||| || |||| ||||||||||||    
T  8069742 ctatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagataaccgttcgagaattacacc 8069833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 8883233 - 8883324
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||||||||| |||| ||||||||||||||  ||||| |||||||| | |||||||||||| ||||||||| |||| ||||||||||||    
T  8883233 ctatcaaccacgctgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc 8883324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 271 - 361
Target Start/End: Original strand, 8887994 - 8888084
Alignment:
Q  271 tatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||||||||||||| ||||||||||||| | ||||| |||||||| | ||||||||| || ||||||||| |||| ||||||||||||    
T  8887994 tatcaaccacgccgcctccaggataaaacaaatccagctgcaactgtgcggttaactactacactgtagaaaaccgttcgagaattacacc 8888084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 259 - 419
Target Start/End: Original strand, 20507705 - 20507865
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  ||||||||||| || |||  |||||||||||||  || | | |  |||| |||||||||||||| | |||  || || |||||| ||||    
T  20507705 tgcaaggcagactatcaaccacaccacctctaggataaaacaagaccaacaatagttgtgcgattaactactgcactctagccaaccggttgagacttac 20507804  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||||  ||||||||||||||||||||||| ||||||||| |||||||| | | ||||||||    
T  20507805 acccgcaaatatggctattaaggtcactcaaatttaataatgaaaccactctaatatggta 20507865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 270 - 370
Target Start/End: Original strand, 20520117 - 20520217
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| || |||||||||||| |||||||||||||| | |||||||||| | |||||||||  ||| |||| ||||||| | |||||    
T  20520117 ctatcaaccacgccgcctccaagataaaacaagtccagctacaactgtgcggttaactactgtactgtagaaaactgttcgagatttacaccttcaaata 20520216  T
Q  370 t 370  Q
    |    
T  20520217 t 20520217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 361
Target Start/End: Complemental strand, 12971662 - 12971572
Alignment:
Q  271 tatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||| ||||||||||  |||||||||||||  || ||||||||||   ||||||||||||||||||||||| |||| ||||||||||||    
T  12971662 tatcaatcacgccgcctctaggataaaacaagcccaactacaactgttcaattaactactgcattgtagaaaaccgttcgagaattacacc 12971572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 12965903 - 12965812
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| ||||||||||||||| || |||||| |||  ||||||||| |||| |||||||||  |||  |||||||||||    
T  12965903 ctatcaaccacgccgcctccaggataaaacaagtccaactacaattgttcgattaactaatgcactgtagaaaactgttcaagaattacacc 12965812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 419
Target Start/End: Original strand, 46964098 - 46964223
Alignment:
Q  290 aggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatatggctattaaggtcactcga 389  Q
    ||||||||||||  |||| ||||||| |||| ||||||| |||| | ||||||| |||| |||| ||||||||| |||||||| |||||||  |||||      
T  46964098 aggataaaacaaactcagatacaactatgtggttaactattgcactatagaaaaccgttcgagatttacaccctcaaatatgg-tattaagaccactc-- 46964194  T
Q  390 atttaatactgaaaccattattatatggta 419  Q
     |||||||||||||||| | | ||||||||    
T  46964195 -tttaatactgaaaccactttgatatggta 46964223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 419
Target Start/End: Complemental strand, 2207757 - 2207634
Alignment:
Q  292 gataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatatggctattaaggtcactcgaat 391  Q
    |||||||||||  || |||||| |||| | |||||||||| | ||||||||| | || |||||||||||||| |||||||| || ||||  |||||   |    
T  2207757 gataaaacaagcccatctacaattgtgcggttaactactgtactgtagaaaacccttcgagaattacaccctcaaatatgg-tactaagaccactc---t 2207662  T
Q  392 ttaatactgaaaccattattatatggta 419  Q
    ||||||||||||||| | ||||||||||    
T  2207661 ttaatactgaaaccacttttatatggta 2207634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 369
Target Start/End: Original strand, 55325847 - 55325938
Alignment:
Q  278 cacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaa-tcgtttgagaattacacccttaaata 369  Q
    |||||||||| ||||||||||||||  ||| |||||||||| | ||||||| |||| |||||||||  || | ||||||||||||||||||||    
T  55325847 cacgccgcctccaggataaaacaagcccagttacaactgtgcggttaacta-tgcactgtagaaaacccgatcgagaattacacccttaaata 55325938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 12112671 - 12112580
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||||||| |||||| |||||||||||||| ||| |||||| || ||| |||||| || || ||||||||| | || |||| |||||||    
T  12112671 ctatcaaccacaccgcctccaggataaaacaagctcaactacaaatgggtggttaactgctacactgtagaaaaccattcgagatttacacc 12112580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 29715707 - 29715770
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgca 333  Q
    ||||||||||||||||||  |||||||||||||| |||||||| ||||| | ||||||| ||||    
T  29715707 ctatcaaccacgccgcctctaggataaaacaagtccagctacagctgtgcggttaactattgca 29715770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 361
Target Start/End: Complemental strand, 25726792 - 25726727
Alignment:
Q  296 aaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||| ||| |||||||||| | |||||||||||| ||||||||| |||| |||| |||||||    
T  25726792 aaacaagtgcagttacaactgtgcggttaactactgcactgtagaaaaccgttcgagatttacacc 25726727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 335
Target Start/End: Complemental strand, 28940191 - 28940126
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcatt 335  Q
    ||||||||||||||  ||  | |||||||||| |||| |||||||| |||||||||||||||||||    
T  28940191 ctatcaaccacgccatctatatgataaaacaaattcaactacaactatgtgattaactactgcatt 28940126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 359
Target Start/End: Complemental strand, 47567225 - 47567136
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattaca 359  Q
    ||||||||||  |||||| |  |||||||||||||||   ||||| |||||| |||||| |||| ||||||||||| || ||||||||||    
T  47567225 ctatcaaccataccgcctccgagataaaacaagttcattgacaacggtgtgaataactattgcactgtagaaaatccttcgagaattaca 47567136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 259 - 406
Target Start/End: Original strand, 7158 - 7301
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| |||||||||||||| ||||||||||||||| | |||||||||||| ||||||||| |||| |||||||||    
T  7158 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattac 7257  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaacca 406  Q
     |||| |||||| | |||||||  |||||   ||||||||||||||||    
T  7258 gccctcaaatattg-tattaagaccactc---tttaatactgaaacca 7301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 259 - 379
Target Start/End: Original strand, 255871 - 255991
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||| ||| |||||||| | ||||||| ||||||||||||||| |||||||||||||||| |||||||||||| ||||||||| |||| ||| |||||    
T  255871 tgcaagacatactatcaactatgccgcctccaggataaaacaagtccagctacaactgtgtggttaactactgcactgtagaaaaccgttcgaggattac 255970  T
Q  359 acccttaaatatggctattaa 379  Q
    ||||| ||||||| |||||||    
T  255971 accctcaaatatgactattaa 255991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 4128 - 4230
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  |||||||||||||  |||||||||||||| |||||||||||||| |||||||||    
T  4128 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattac 4227  T
Q  359 acc 361  Q
    |||    
T  4228 acc 4230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 443985 - 443874
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  ||||||||||||||| || ||||||||||||||  |||||||||||||| | ||||||| |||| | ||||||| |||| |||||||||    
T  443985 tgcaaggcagactatcaaccacgccgtct-caggataaaacaagcccagctacaactgtgcggttaacta-tgcactatagaaaaccgttcgagaattac 443888  T
Q  359 acccttaaatatgg 372  Q
    ||||| ||||||||    
T  443887 accctcaaatatgg 443874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 270 - 372
Target Start/End: Complemental strand, 16649643 - 16649541
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||||||||| |||||||||  ||| |||||||||||||| |||||    
T  16649643 ctatcaaccacgccgcctccgggataaaacaagtccagctacaactgtgtggttaactactgcactgtagaaaactgttcgagaattacaccctcaaata 16649544  T
Q  370 tgg 372  Q
    |||    
T  16649543 tgg 16649541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 403
Target Start/End: Original strand, 38620746 - 38620886
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||| ||||||||| || |||||||||||| || ||||||||||| | ||||||||||||||||||||||  |||||||| ||||    
T  38620746 tgcaaggcagactatcaactacgccgcctccaagataaaacaagtccaactacaactgtgcggttaactactgcattgtagaaaactgtttgagatttac 38620845  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaa 403  Q
    ||||| |||||||| |||||||  |||||   |||||||||||||    
T  38620846 accctaaaatatgg-tattaagaccactc---tttaatactgaaa 38620886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 372
Target Start/End: Original strand, 8137993 - 8138106
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  ||||||||||   ||||| |||||||||||||| ||||||||||||||| | |||||||||||| ||||||||| |||| |||||||||    
T  8137993 tgcaaggcagactatcaaccatatcgcctccaggataaaacaagctcagctacaactgtgcggttaactactgcaatgtagaaaaccgttcgagaattac 8138092  T
Q  359 acccttaaatatgg 372  Q
    ||||| ||||||||    
T  8138093 accctcaaatatgg 8138106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 373
Target Start/End: Complemental strand, 19799043 - 19798940
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||||| | |||||||||||| ||||||||| |||| |||| ||||||| | |||||    
T  19799043 ctatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagatttacaccttcaaata 19798944  T
Q  370 tggc 373  Q
    ||||    
T  19798943 tggc 19798940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 25843821 - 25843923
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| ||| ||||||||||  |||||||||||||| | |||||||||||| ||||||||| |||| |||||||||||||| | |||    
T  25843821 ctatcaaccacgccgcctccagtataaaacaagcccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcatata 25843920  T
Q  370 tgg 372  Q
    |||    
T  25843921 tgg 25843923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 270 - 372
Target Start/End: Complemental strand, 33301210 - 33301108
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||||||| | |||||||||||| |||||||||  ||| |||||||||||| | |||||    
T  33301210 ctatcaaccacgccgcctccaggataaaacaatttcatctacaactgtgcggttaactactgcactgtagaaaactgttcgagaattacaccttcaaata 33301111  T
Q  370 tgg 372  Q
    |||    
T  33301110 tgg 33301108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 261 - 373
Target Start/End: Original strand, 11806415 - 11806527
Alignment:
Q  261 caaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacac 360  Q
    |||||||  |||||||||||||||||||||| |||||| ||||||| |||||| |||| | |||| ||||||| || |||||||||||||||| ||||||    
T  11806415 caaggcagactatcaaccacgccgccttcagaataaaagaagttcaactacaattgtgcggttaaatactgcagtgcagaaaatcgtttgagatttacac 11806514  T
Q  361 ccttaaatatggc 373  Q
      | |||||||||    
T  11806515 tttcaaatatggc 11806527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 51041504 - 51041409
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaa 354  Q
    |||||||||  |||||||||||||||||| || |||||||||||  |||||||||||||  |||||| ||||||| |||||||||||||| |||||    
T  51041504 tgcaaggcagactatcaaccacgccgcctccaagataaaacaagcccagctacaactgttcgattaattactgcactgtagaaaatcgttcgagaa 51041409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 10135510 - 10135624
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  | ||||||||||||||||  |||||||||||||  ||| | |||||||| | |||||||||||| ||||||||| ||||  ||||||||    
T  10135510 tgcaaggcagacaatcaaccacgccgcctctaggataaaacaagcccagttgcaactgtgcggttaactactgcactgtagaaaaccgttcaagaattac 10135609  T
Q  359 acccttaaatatggc 373  Q
    ||||| |||||||||    
T  10135610 accctcaaatatggc 10135624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 361
Target Start/End: Complemental strand, 23192856 - 23192757
Alignment:
Q  261 caaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacac 360  Q
    |||||||  |||||||||||||| ||| ||||||||||||||  ||||||||| |||  |||||||||||||| ||||||||| |||| |||||||||||    
T  23192856 caaggcagactatcaaccacgcctcctccaggataaaacaagc-cagctacaattgttcgattaactactgcactgtagaaaaccgttcgagaattacac 23192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 47451255 - 47451164
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| || ||||||||||| ||| ||||||||||  |||||||||||| | || |||||| |||| ||||||||||||    
T  47451255 ctatcaaccacgccgcctccaagataaaacaagctcaactacaactgttcgattaactactgtactgcagaaaaccgttcgagaattacacc 47451164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 435
Target Start/End: Complemental strand, 25779345 - 25779183
Alignment:
Q  271 tatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaacta--ctgcattgtagaaaatcgtttgagaattacacccttaaat 368  Q
    ||||| ||||||| | ||||||||||||||| | || | |||| |||  |||||||||  ||||| |||||  |||||    ||||||||||||| ||||    
T  25779345 tatcagccacgccacattcaggataaaacaattccaacgacaattgtacgattaactatactgcactgtagctaatcg----agaattacaccctcaaat 25779250  T
Q  369 atggctattaaggtcactcgaatttaatactgaaaccattattatatggtactatgaccattctatt 435  Q
    |||||| |||||  ||||| |||||||||||||||||| ||| |||| ||| |||||||| ||||||    
T  25779249 atggcttttaagaccactcaaatttaatactgaaaccactataatatagtattatgaccactctatt 25779183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 26927763 - 26927661
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  ||||||||||||||||||  |  ||||||||||  |||||||||||||    |||||||||||| |||||||||||||| |||||||||    
T  26927763 tgcaaggcagactatcaaccacgccgcctctaaaataaaacaagcccagctacaactgtacacttaactactgcactgtagaaaatcgttcgagaattac 26927664  T
Q  359 acc 361  Q
    |||    
T  26927663 acc 26927661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 16035674 - 16035746
Alignment:
Q  271 tatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaa 343  Q
    ||||||||||||||||| |||||||||||||| ||| |||||| |||||| |||||||||||| | |||||||    
T  16035674 tatcaaccacgccgcctccaggataaaacaagctcatctacaaatgtgtggttaactactgcactttagaaaa 16035746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 16833549 - 16833640
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||||| |||| | | ||||||||||||   ||||||||||||||  |||||||||||||||||||||||| |||| || |||||||||    
T  16833549 ctatcaacctcgccacatccaggataaaacagcctcagctacaactgttcgattaactactgcattgtagaaaaccgttcgaaaattacacc 16833640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 47455415 - 47455351
Alignment:
Q  271 tatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcatt 335  Q
    ||||||||||||||||| ||||||||||||||   ||||||||||||  ||||||||||||||||    
T  47455415 tatcaaccacgccgcctccaggataaaacaagcctagctacaactgttcgattaactactgcatt 47455351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 39588397 - 39588306
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||| ||||||||  || ||||||||| |||| ||| |||||| |||  |||||||||||||| ||||||||| |||| ||||||||||||    
T  39588397 ctatctaccacgcctactccaggataaagcaagctcatctacaattgttcgattaactactgcagtgtagaaaaccgttcgagaattacacc 39588306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 361
Target Start/End: Original strand, 3094188 - 3094244
Alignment:
Q  305 cagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||  |||||||||||||| ||||||||| |||| ||||||||||||    
T  3094188 cagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 3094244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 343
Target Start/End: Original strand, 10140143 - 10140227
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaa 343  Q
    |||||||||  | |||||||||||| |||  |||||||||||||  ||||| |||||||| | |||||||||||| |||||||||    
T  10140143 tgcaaggcagacaatcaaccacgccacctctaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaa 10140227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 18784590 - 18784496
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||| ||||||||||| ||||        || | |||||||||||| ||||||||| |||| |||||||||    
T  18784590 tgcaaggcagactatcaaccacgccgcctccagaataaaacaagtccagc--------tgcggttaactactgcactgtagaaaaccgttcgagaattac 18784499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 40166034 - 40166123
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtt 348  Q
    |||||||||  ||| |||| |||||||||  |||||||||||||  || |||||||| |  |||||||||||||| ||||||||| ||||    
T  40166034 tgcaaggcagactaacaacaacgccgcctctaggataaaacaagcacaactacaactatacgattaactactgcactgtagaaaaccgtt 40166123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 5346728 - 5346800
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaa 342  Q
    ||||||| |||||||||| || ||| |||||||||||||||||||| ||  ||||| |||| || ||||||||    
T  5346728 ctatcaatcacgccgcctccaagatgaaacaagttcagctacaactatgcaattaaatactacaatgtagaaa 5346800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 310
Target Start/End: Original strand, 8900319 - 8900359
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagcta 310  Q
    ||||||| ||| |||||| ||||||||||||||||||||||    
T  8900319 ctatcaatcacaccgcctccaggataaaacaagttcagcta 8900359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 328 - 435
Target Start/End: Complemental strand, 146406 - 146299
Alignment:
Q  328 actgcattgtagaaaatcgtttgagaattacacccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggtactatgacc 427  Q
    |||||| |||||||||| ||| ||||||||||| || ||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||| | |||||    
T  146406 actgcactgtagaaaattgttcgagaattacactctcaaatatggctagtaaggacactcgaatttaataatgaaaccactattatatggtattgtgacc 146307  T
Q  428 attctatt 435  Q
    ||||||||    
T  146306 attctatt 146299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 332
Target Start/End: Complemental strand, 155544 - 155486
Alignment:
Q  274 caaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgc 332  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||    
T  155544 caaccacgccgcctctaggataaaacaagttcagctacaactgtgcgattaactactgc 155486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 9928 - 9826
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  |||||||||||||  |||||||||||||| ||||||||| |||| |||||||||    
T  9928 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattac 9829  T
Q  359 acc 361  Q
    |||    
T  9828 acc 9826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 353
Target Start/End: Original strand, 35688 - 35782
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgaga 353  Q
    |||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||||| | |||||||||||| |||||||||||||| ||||    
T  35688 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgtgcggttaactactgcactgtagaaaatcgttcgaga 35782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 17964600 - 17964487
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  ||||| |||||||| | |||||||||||| ||||||||| |||| |||||||||    
T  17964600 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattac 17964501  T
Q  359 acccttaaatatgg 372  Q
    ||| | ||||||||    
T  17964500 accttcaaatatgg 17964487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 24589194 - 24589103
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||||||||||| || ||||||||||||||| || ||||||||||| | |||||||||||||||||||||| |||| ||||||||||||    
T  24589194 ctatcaaccacgccgtctccaggataaaacaagtccaactacaactgtgcggttaactactgcattgtagaaaaccgttcgagaattacacc 24589103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 271 - 361
Target Start/End: Original strand, 14509050 - 14509140
Alignment:
Q  271 tatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||||||||||| | || ||||||||||| ||| ||||||||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  14509050 tatcaaccacgccgcttccaagataaaacaagctcatctacaactgttcgattaactactgcattgtagaaaatcgttcgagaattacacc 14509140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 259 - 372
Target Start/End: Original strand, 12689025 - 12689138
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  ||||||||||||||| || |||||||||||||| ||||||||||||||| | ||||||||| || ||||||||| |||| || ||||||    
T  12689025 tgcaaggcagactatcaaccacgccgtctccaggataaaacaagctcagctacaactgtgcggttaactactacactgtagaaaaccgttcgacaattac 12689124  T
Q  359 acccttaaatatgg 372  Q
    ||||| || |||||    
T  12689125 accctcaattatgg 12689138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 372
Target Start/End: Complemental strand, 11534735 - 11534639
Alignment:
Q  276 accacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatatgg 372  Q
    |||||||||||| |||||||||||||| ||| ||||||||||| | | |||||||||||||||||||| ||||  ||||||||||||| ||||||||    
T  11534735 accacgccgcctccaggataaaacaagctcaactacaactgtgcggtgaactactgcattgtagaaaaccgttccagaattacaccctcaaatatgg 11534639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 372
Target Start/End: Complemental strand, 11560245 - 11560149
Alignment:
Q  276 accacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatatgg 372  Q
    |||||||||||| |||||||||||||| ||| ||||||||||| | | |||||||||||||||||||| ||||  ||||||||||||| ||||||||    
T  11560245 accacgccgcctccaggataaaacaagctcaactacaactgtgcggtgaactactgcattgtagaaaaccgttccagaattacaccctcaaatatgg 11560149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 270 - 403
Target Start/End: Complemental strand, 29892291 - 29892162
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    ||||||||||| || ||| ||||||||||||||| |||||||||||||||| ||||||| |||||||||||||| | || || | ||||||||| |||||    
T  29892291 ctatcaaccacacctcctccaggataaaacaagtccagctacaactgtgtggttaactattgcattgtagaaaacctttcgatatttacaccctcaaata 29892192  T
Q  370 tggctattaaggtcactcgaatttaatactgaaa 403  Q
    ||| || |||| ||||||   |||||||||||||    
T  29892191 tgg-tactaagatcactc---tttaatactgaaa 29892162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 8747836 - 8747938
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||| || ||||||||| ||||||||| |||||||||||||| |||||| ||||| |||| |||||||||||| ||||||||| |||| || ||||||    
T  8747836 tgcaagacaggctatcaacaacgccgcctccaggataaaacaagctcagctgcaactatgtggttaactactgcactgtagaaaaccgttcgaaaattac 8747935  T
Q  359 acc 361  Q
    |||    
T  8747936 acc 8747938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 261 - 363
Target Start/End: Complemental strand, 16836195 - 16836093
Alignment:
Q  261 caaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacac 360  Q
    |||||||  |||||||||||||||||| ||||||||||||||  |||||||||||||| | |||  ||||||| ||||||||| |||| |||||||||||    
T  16836195 caaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttagttactgcactgtagaaaaccgttcgagaattacac 16836096  T
Q  361 cct 363  Q
    |||    
T  16836095 cct 16836093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 372
Target Start/End: Complemental strand, 33687633 - 33687531
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||| |||| || |||||||||||||  ||| ||||||||||| | |||||||||||||||||||||||| || |||| ||||||||| |||||    
T  33687633 ctatcaaccatgccgtctccaggataaaacaaactcaactacaactgtgcggttaactactgcattgtagaaaatccttcgagatttacaccctcaaata 33687534  T
Q  370 tgg 372  Q
    |||    
T  33687533 tgg 33687531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 419
Target Start/End: Complemental strand, 2700136 - 2699992
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||| | ||||||||||||||  || ||||||||||  |||||||||||||| |||||||||||| | ||||||||||||   |||||    
T  2700136 ctatcaaccacgccgcttccaggataaaacaagcccaactacaactgttcgattaactactgcactgtagaaaatcg-tcgagaattacacctccaaata 2700038  T
Q  370 tggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||| || |||| ||||||   |||||||||||||||| | | ||||||||    
T  2700037 tgg-tactaagatcactc---tttaatactgaaaccactttaatatggta 2699992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 6407890 - 6407800
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||| | ||||||||| || ||||||||| ||||  |||||||||||    
T  6407890 ctatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactact-cactgtagaaaaccgttcaagaattacacc 6407800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 11570790 - 11570634
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  | |||||||||||||||| |||||||||||||| ||||||||||||||| | | ||||||| |  ||||||||| ||||  |||||||     
T  11570790 tgcaaggcagacaatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggtgaactactccgctgtagaaaaccgttccagaattat 11570691  T
Q  359 acccttaaatatggctattaaggtcactcgaatttaatactgaaaccattattatatggta 419  Q
    ||||| |||||||| || ||||  |||||   |||||||||||||||| | | ||||||||    
T  11570690 accctcaaatatgg-tactaagaccactc---tttaatactgaaaccactttaatatggta 11570634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 270 - 372
Target Start/End: Complemental strand, 20748314 - 20748213
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||||| ||| ||||||||||| || ||||||||||| | ||||||||||||  ||||||||  ||| |||||||||| |||||||||    
T  20748314 ctatcaaccacgccgcctccagaataaaacaagtccatctacaactgtgcggttaactactgcaccgtagaaaacggttcgagaattaca-ccttaaata 20748216  T
Q  370 tgg 372  Q
    |||    
T  20748215 tgg 20748213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 4157410 - 4157297
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||| ||| || |||||||| | ||||  ||||||||||||  ||||||||||| ||| | |||||||||||| |||||||||||||| || | ||||    
T  4157410 tgcaagacatactttcaaccacactgcctctaggataaaacaaactcagctacaacggtgcggttaactactgcactgtagaaaatcgttcgaaatttac 4157311  T
Q  359 acccttaaatatgg 372  Q
    ||||||||||||||    
T  4157310 acccttaaatatgg 4157297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 273 - 433
Target Start/End: Complemental strand, 15991767 - 15991609
Alignment:
Q  273 tcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatatgg 372  Q
    ||||||| |||||||  |||||||||||||||||||| ||| ||||   |||||||||||| ||| ||||| ||||||||||||||||  | ||||||||    
T  15991767 tcaaccaagccgcctctaggataaaacaagttcagctgcaattgtgcagttaactactgcactgtcgaaaaccgtttgagaattacacaatcaaatatgg 15991668  T
Q  373 ctattaaggtcactcgaatttaatactgaaaccattattatatggtactatgaccattcta 433  Q
     |||||| | |||||   ||||| |||||||||| |    |||||||||||||||| ||||    
T  15991667 gtattaatgccactc--ttttaaaactgaaaccaatcaattatggtactatgaccactcta 15991609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 273 - 433
Target Start/End: Complemental strand, 15999429 - 15999271
Alignment:
Q  273 tcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatatgg 372  Q
    ||||||| |||||||  |||||||||||||||||||| ||| ||||   |||||||||||| ||| ||||| ||||||||||||||||  | ||||||||    
T  15999429 tcaaccaagccgcctctaggataaaacaagttcagctgcaattgtgcagttaactactgcactgtcgaaaaccgtttgagaattacacaatcaaatatgg 15999330  T
Q  373 ctattaaggtcactcgaatttaatactgaaaccattattatatggtactatgaccattcta 433  Q
     |||||| | |||||   ||||| |||||||||| |    |||||||||||||||| ||||    
T  15999329 gtattaatgccactc--ttttaaaactgaaaccaatcaattatggtactatgaccactcta 15999271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 21309096 - 21309159
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgca 333  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||| | ||||||||||||    
T  21309096 ctatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactactgca 21309159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 371
Target Start/End: Complemental strand, 12406383 - 12406282
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    ||||||| ||||||||||||| ||||||||| | ||| ||||||||||||| ||||||||||||  |||||||| |||  |||| ||| ||||| |||||    
T  12406383 ctatcaatcacgccgccttcatgataaaacatgctcaactacaactgtgtggttaactactgcaccgtagaaaaccgtgagagatttataccctcaaata 12406284  T
Q  370 tg 371  Q
    ||    
T  12406283 tg 12406282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 343
Target Start/End: Complemental strand, 22695312 - 22695228
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaa 343  Q
    |||||| ||| | ||||| ||| |||||| || |||||||||||| |||||||||||||| | ||||| ||||||||||||||||    
T  22695312 tgcaagacatacaatcaatcacaccgcctccacgataaaacaagtacagctacaactgtgcggttaaccactgcattgtagaaaa 22695228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 361
Target Start/End: Original strand, 22609641 - 22609724
Alignment:
Q  278 cacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||||||||| |||||||||||||| ||| ||||||||| ||||||||| ||||||  ||||||||   || ||||||||||||    
T  22609641 cacgccgcctccaggataaaacaagctcaactacaactgcgtgattaacaactgcacggtagaaaactattcgagaattacacc 22609724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 370
Target Start/End: Complemental strand, 19995433 - 19995333
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||| | ||||| ||||||||||||  ||||||||||| || | ||||||||| ||  |||||||| | || |||| ||||||||| |||||    
T  19995433 ctatcaaccacggcaccttcgggataaaacaagcccagctacaactatgcggttaactactacaccgtagaaaacctttcgagatttacaccctcaaata 19995334  T
Q  370 t 370  Q
    |    
T  19995333 t 19995333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 353
Target Start/End: Complemental strand, 11614133 - 11614039
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgaga 353  Q
    |||||||||  |||||||||||||||||| ||||||||||||||  ||  ||||| |||| | ||||||| |||| | |||||||  ||||||||    
T  11614133 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcacaattacaattgtgcggttaactaatgcactttagaaaactgtttgaga 11614039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 370
Target Start/End: Complemental strand, 25316583 - 25316494
Alignment:
Q  280 cgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatat 370  Q
    ||||| || |||||||||||||||||| ||||||| ||| | ||||||| |||| |||||||||  ||| ||||||| |||||| ||||||    
T  25316583 cgccgtctccaggataaaacaagttcatctacaaccgtgcggttaacta-tgcactgtagaaaactgttcgagaattgcaccctcaaatat 25316494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 370
Target Start/End: Complemental strand, 26204077 - 26203988
Alignment:
Q  280 cgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaatat 370  Q
    ||||| || |||||||||||||||||| ||||||| ||| | ||||||| |||| |||||||||  ||| ||||||| |||||| ||||||    
T  26204077 cgccgtctccaggataaaacaagttcatctacaaccgtgcggttaacta-tgcactgtagaaaactgttcgagaattgcaccctcaaatat 26203988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 13736704 - 13736617
Alignment:
Q  274 caaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||| | |||| ||||||||||||||  || |||||| |||| || ||||||||||| |||||||||  ||| |||| |||||||    
T  13736704 caaccacactgcctccaggataaaacaagcacatctacaaatgtgcgaataactactgcactgtagaaaactgttcgagatttacacc 13736617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 270 - 431
Target Start/End: Original strand, 8955 - 9117
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    ||||||| |||| |||||||||||||||||||||  ||||  |||| || ||||||||||||||||||| |||||| ||  ||||||||||||| | |||    
T  8955 ctatcaatcacgtcgccttcaggataaaacaagtctagctgtaactatgcgattaactactgcattgtacaaaatcattcaagaattacaccctcatata 9054  T
Q  370 tggctatt-aaggtcactcgaatttaatactgaaaccattattatatggtactatgaccattc 431  Q
    |||||||| |||||||||| ||||  | | |||||||| | | |||||||| | |||||||||    
T  9055 tggctattaaaggtcactcaaattgtacattgaaaccactctaatatggtattgtgaccattc 9117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 83120 - 83222
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||||||  |||||||||| ||||||| |||||||||||||| |||||| |||||||| | |||||||||||| ||||||||| | || |||||||||    
T  83120 tgcaaggcagactatcaaccatgccgcctccaggataaaacaagctcagctgcaactgtgcggttaactactgcactgtagaaaacctttcgagaattac 83219  T
Q  359 acc 361  Q
    |||    
T  83220 acc 83222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 29220 - 29311
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    ||||||||||||||| ||||||||||||| ||||  | ||| ||||||| | |||||||||||||||||||||| |||| ||||||||||||    
T  29220 ctatcaaccacgccgtcttcaggataaaataagtctaactataactgtgcggttaactactgcattgtagaaaaccgttcgagaattacacc 29311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 25464 - 25566
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacccttaaata 369  Q
    |||||||||||||||| | ||||||||||||||  || ||||||||||| | ||||||||| || ||||||||| |||| |||| ||||| | | |||||    
T  25464 ctatcaaccacgccgcgtccaggataaaacaagcccaactacaactgtgcggttaactactacactgtagaaaaccgttcgagacttacatcttcaaata 25563  T
Q  370 tgg 372  Q
    |||    
T  25564 tgg 25566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 166127 - 166025
Alignment:
Q  259 tgcaaggcatgctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattac 358  Q
    |||||| ||| |||||||||||||||||| ||||||||||||||  ||||| |||||||| | |||| ||||||| |||| |||| |||| |||||||||    
T  166127 tgcaagacatactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaattactgcactgtaaaaaaccgttcgagaattac 166028  T
Q  359 acc 361  Q
    |||    
T  166027 acc 166025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2020 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 369
Target Start/End: Original strand, 436 - 541
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgt------gtgattaactactgcattgtagaaaatcgtttgagaattacaccct 363  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||||      | | |||||||||||| ||||||||| ||||||||| |||||||||    
T  436 ctatcaaccacgtcgcctccaggataaaacaagctcagctacaactgtgcgcgcgcggttaactactgcactgtagaaaaccgtttgagatttacaccct 535  T
Q  364 taaata 369  Q
     |||||    
T  536 caaata 541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 369
Target Start/End: Complemental strand, 165059 - 164954
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgt------gtgattaactactgcattgtagaaaatcgtttgagaattacaccct 363  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||||      | | |||||||||||| ||||||||| ||||||||| |||||||||    
T  165059 ctatcaaccacgtcgcctccaggataaaacaagctcagctacaactgtgcgcgcgcggttaactactgcactgtagaaaaccgtttgagatttacaccct 164960  T
Q  364 taaata 369  Q
     |||||    
T  164959 caaata 164954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 1205 - 1296
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaatcgtttgagaattacacc 361  Q
    |||| |||||||| |||| ||||  ||||||||||||||||| |||||| | |||||||||||| | |||||||||||| |||| |||||||    
T  1205 ctataaaccacgctgcctccaggcaaaaacaagttcagctacgactgtgcggttaactactgcactatagaaaatcgttcgagatttacacc 1296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 344
Target Start/End: Original strand, 13337 - 13411
Alignment:
Q  270 ctatcaaccacgccgccttcaggataaaacaagttcagctacaactgtgtgattaactactgcattgtagaaaat 344  Q
    |||||||||| |  |||| || |||| |||||||||| ||||||||||| | ||||||||| || ||||||||||    
T  13337 ctatcaaccatggtgcctccaagatacaacaagttcaactacaactgtgcggttaactacttcactgtagaaaat 13411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 4043 - 4088
Alignment:
Q  257 tttgcaaggcatgctatcaaccacgccgccttcaggataaaacaag 302  Q
    |||||||| ||| | |||||||||||||||| ||||||||||||||    
T  4043 tttgcaagacataccatcaaccacgccgcctccaggataaaacaag 4088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 4092 - 4140
Alignment:
Q  324 aactactgcattgtagaaaatcgtttgagaattacacccttaaatatgg 372  Q
    |||||||||||||||||||| | || |||| ||| ||||||||||||||    
T  4092 aactactgcattgtagaaaaccattcgagatttatacccttaaatatgg 4140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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