View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7832_low_26 (Length: 321)
Name: NF7832_low_26
Description: NF7832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7832_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 16 - 305
Target Start/End: Original strand, 42485167 - 42485456
Alignment:
| Q |
16 |
atcatcactaaatccacaaggtgaaaattcattcttaaacctttcaaaccattgttttcctctctcccttttgtcacaataatcaccaccaccatcatct |
115 |
Q |
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| T |
42485167 |
atcatcactaaatccacaaggtgaaaattcattcttaaacctttcaaaccattgttttcctctctcccttttgtcacaataatcaccaccaccatcatct |
42485266 |
T |
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| Q |
116 |
tcatcatgatcaaattcatgatcacaagccaaaaccctaactatgcttcttgaacactccctttccaacattaacctctcattacttgttggtggaaaac |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42485267 |
tcatcatgatcaaattcatgatcacaagccaaaaccctaactatgcttcttgaacactccctttccaacattaacctctcattacttgttggtggaaaac |
42485366 |
T |
|
| Q |
216 |
tctcctctaacatctcaaaataaattctataaaacttaagacactcttcaaaacatttaacaaaatcatcactacaaaaatcaccttctt |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42485367 |
tctcctctaacatctcaaaataaattctataaaacttaagacactcttcaaaacatttaacaaaatcatcactacaaaaatcaccttctt |
42485456 |
T |
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