View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7836_low_14 (Length: 365)

Name: NF7836_low_14
Description: NF7836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7836_low_14
NF7836_low_14
[»] scaffold0110 (1 HSPs)
scaffold0110 (36-348)||(4182-4494)
[»] chr3 (47 HSPs)
chr3 (37-221)||(38462208-38462390)
chr3 (62-181)||(23785221-23785340)
chr3 (87-210)||(40122763-40122884)
chr3 (135-213)||(20192664-20192741)
chr3 (50-207)||(36646355-36646511)
chr3 (109-204)||(24887315-24887409)
chr3 (36-155)||(43115048-43115167)
chr3 (55-197)||(54775079-54775219)
chr3 (125-198)||(36783382-36783454)
chr3 (111-242)||(1816488-1816619)
chr3 (125-181)||(2201094-2201150)
chr3 (37-224)||(2321099-2321288)
chr3 (36-179)||(14548680-14548823)
chr3 (125-221)||(20502116-20502219)
chr3 (110-186)||(25453892-25453968)
chr3 (106-181)||(23315592-23315667)
chr3 (145-204)||(49586984-49587042)
chr3 (87-181)||(24785171-24785265)
chr3 (111-181)||(31337435-31337505)
chr3 (48-146)||(37273135-37273233)
chr3 (145-247)||(41028919-41029020)
chr3 (170-239)||(16790181-16790249)
chr3 (112-161)||(20874339-20874388)
chr3 (140-197)||(42038940-42038996)
chr3 (106-221)||(24158532-24158645)
chr3 (87-231)||(27792789-27792932)
chr3 (125-178)||(33965537-33965592)
chr3 (127-239)||(43116478-43116589)
chr3 (130-213)||(1395606-1395688)
chr3 (89-195)||(2318596-2318703)
chr3 (109-176)||(23249529-23249596)
chr3 (125-204)||(28306102-28306180)
chr3 (61-176)||(41452494-41452609)
chr3 (136-209)||(2865718-2865789)
chr3 (125-179)||(19679376-19679430)
chr3 (108-182)||(21872302-21872376)
chr3 (125-238)||(31075604-31075717)
chr3 (56-161)||(1217779-1217884)
chr3 (135-180)||(3467446-3467491)
chr3 (125-178)||(33405215-33405268)
chr3 (136-181)||(54965472-54965517)
chr3 (143-211)||(8007761-8007828)
chr3 (135-219)||(12923383-12923466)
chr3 (147-203)||(15304417-15304472)
chr3 (125-221)||(22232753-22232848)
chr3 (125-197)||(24235731-24235802)
chr3 (153-221)||(44374720-44374787)
[»] chr6 (47 HSPs)
chr6 (37-204)||(281808-281974)
chr6 (124-230)||(10016463-10016568)
chr6 (61-198)||(2117353-2117489)
chr6 (129-181)||(3181120-3181172)
chr6 (129-212)||(29274281-29274363)
chr6 (55-197)||(5328925-5329065)
chr6 (135-244)||(5550036-5550144)
chr6 (129-210)||(22742304-22742384)
chr6 (126-198)||(2027455-2027526)
chr6 (125-221)||(4248885-4248980)
chr6 (143-231)||(8470054-8470141)
chr6 (56-219)||(9027506-9027669)
chr6 (136-240)||(10452419-10452522)
chr6 (61-161)||(28088207-28088306)
chr6 (81-181)||(31671078-31671178)
chr6 (102-181)||(3785725-3785804)
chr6 (34-221)||(8420154-8420340)
chr6 (134-197)||(34429747-34429809)
chr6 (165-226)||(5637313-5637375)
chr6 (50-203)||(9093528-9093681)
chr6 (87-221)||(10154148-10154281)
chr6 (50-160)||(10616514-10616624)
chr6 (125-198)||(1402946-1403018)
chr6 (163-240)||(2514610-2514686)
chr6 (125-178)||(5623125-5623178)
chr6 (37-117)||(2460111-2460191)
chr6 (125-197)||(4006665-4006736)
chr6 (50-181)||(4080884-4081013)
chr6 (157-213)||(24774693-24774748)
chr6 (92-240)||(32386578-32386725)
chr6 (125-196)||(2112152-2112222)
chr6 (56-219)||(7148596-7148757)
chr6 (113-176)||(10032542-10032605)
chr6 (142-197)||(24836264-24836318)
chr6 (61-180)||(30523627-30523745)
chr6 (37-239)||(32975887-32976088)
chr6 (106-209)||(33787774-33787876)
chr6 (128-242)||(3204593-3204706)
chr6 (93-198)||(4247077-4247181)
chr6 (110-203)||(24782004-24782096)
chr6 (127-204)||(31624202-31624278)
chr6 (36-181)||(33887796-33887941)
chr6 (125-161)||(4246396-4246432)
chr6 (107-211)||(6654552-6654655)
chr6 (125-181)||(25426136-25426192)
chr6 (105-181)||(28660788-28660864)
chr6 (34-78)||(32917266-32917310)
[»] chr5 (56 HSPs)
chr5 (88-221)||(28586777-28586909)
chr5 (56-212)||(16889671-16889826)
chr5 (149-241)||(20982207-20982298)
chr5 (55-198)||(14295456-14295598)
chr5 (39-197)||(37588322-37588479)
chr5 (80-213)||(12975282-12975413)
chr5 (127-242)||(39128545-39128659)
chr5 (87-177)||(18875331-18875421)
chr5 (129-241)||(9202800-9202912)
chr5 (50-203)||(35960359-35960510)
chr5 (79-211)||(12425508-12425639)
chr5 (130-181)||(32059642-32059693)
chr5 (36-211)||(32172590-32172764)
chr5 (150-240)||(37063147-37063236)
chr5 (39-197)||(37526161-37526318)
chr5 (108-181)||(38047886-38047959)
chr5 (128-213)||(39257438-39257521)
chr5 (153-213)||(7096203-7096262)
chr5 (135-231)||(19177396-19177491)
chr5 (36-184)||(30217045-30217192)
chr5 (61-147)||(1437611-1437697)
chr5 (142-237)||(35135727-35135821)
chr5 (133-179)||(14980471-14980517)
chr5 (125-232)||(26209461-26209566)
chr5 (126-195)||(12595789-12595857)
chr5 (164-221)||(35095870-35095926)
chr5 (55-168)||(36542260-36542373)
chr5 (140-213)||(38829698-38829770)
chr5 (56-161)||(41957430-41957535)
chr5 (129-181)||(36539712-36539764)
chr5 (125-181)||(41277398-41277454)
chr5 (142-181)||(583838-583877)
chr5 (84-203)||(3970687-3970806)
chr5 (34-180)||(6109452-6109596)
chr5 (121-160)||(8177581-8177620)
chr5 (106-181)||(15003543-15003618)
chr5 (82-221)||(18704041-18704178)
chr5 (39-197)||(37690598-37690756)
chr5 (106-209)||(38831486-38831587)
chr5 (106-232)||(19113146-19113271)
chr5 (130-184)||(19369276-19369330)
chr5 (48-181)||(26390760-26390893)
chr5 (82-213)||(15074754-15074883)
chr5 (56-133)||(18700399-18700475)
chr5 (127-180)||(18857450-18857503)
chr5 (108-181)||(37198111-37198184)
chr5 (61-161)||(2569679-2569779)
chr5 (129-209)||(8481157-8481236)
chr5 (61-181)||(10272415-10272535)
chr5 (129-213)||(12595503-12595586)
chr5 (127-198)||(14599353-14599425)
chr5 (125-181)||(26516366-26516422)
chr5 (145-197)||(29116998-29117049)
chr5 (137-221)||(31694445-31694528)
chr5 (125-181)||(35550915-35550970)
chr5 (129-177)||(41017697-41017745)
[»] chr8 (55 HSPs)
chr8 (61-242)||(4558704-4558884)
chr8 (82-239)||(28769344-28769500)
chr8 (82-210)||(12361130-12361257)
chr8 (119-198)||(27728063-27728141)
chr8 (125-208)||(33209268-33209350)
chr8 (125-221)||(35298525-35298621)
chr8 (48-228)||(39551180-39551359)
chr8 (106-213)||(29973016-29973122)
chr8 (147-221)||(35534931-35535004)
chr8 (108-181)||(4763884-4763957)
chr8 (110-239)||(10727106-10727233)
chr8 (48-180)||(30191112-30191244)
chr8 (88-204)||(1470867-1470982)
chr8 (125-221)||(8799332-8799427)
chr8 (164-240)||(14482110-14482185)
chr8 (106-181)||(6509332-6509407)
chr8 (34-181)||(6950288-6950435)
chr8 (67-198)||(11183495-11183625)
chr8 (145-239)||(3645884-3645977)
chr8 (136-213)||(10076335-10076410)
chr8 (119-181)||(34770858-34770920)
chr8 (93-172)||(43704392-43704473)
chr8 (153-242)||(34563156-34563244)
chr8 (125-242)||(35869743-35869859)
chr8 (126-210)||(3936787-3936870)
chr8 (87-147)||(10079080-10079140)
chr8 (36-231)||(13652132-13652327)
chr8 (36-231)||(13710775-13710970)
chr8 (87-147)||(30277255-30277315)
chr8 (163-239)||(39392747-39392822)
chr8 (31-231)||(41620245-41620444)
chr8 (100-160)||(44865587-44865647)
chr8 (48-147)||(8060669-8060768)
chr8 (82-209)||(9699940-9700066)
chr8 (93-212)||(11795028-11795146)
chr8 (130-197)||(26820150-26820216)
chr8 (125-176)||(30013189-30013240)
chr8 (87-182)||(42215316-42215411)
chr8 (82-176)||(26284800-26284894)
chr8 (135-241)||(29699161-29699266)
chr8 (87-181)||(31862459-31862553)
chr8 (125-239)||(35453671-35453784)
chr8 (36-78)||(40280185-40280227)
chr8 (128-210)||(42597339-42597420)
chr8 (134-219)||(6918236-6918320)
chr8 (187-232)||(8629025-8629070)
chr8 (112-181)||(31885094-31885162)
chr8 (93-198)||(39561557-39561661)
chr8 (164-221)||(40356798-40356854)
chr8 (129-181)||(787158-787210)
chr8 (82-154)||(8062322-8062394)
chr8 (129-197)||(30040598-30040664)
chr8 (87-159)||(31705073-31705145)
chr8 (34-114)||(39049305-39049385)
chr8 (125-181)||(41336693-41336749)
[»] chr4 (51 HSPs)
chr4 (110-221)||(44319877-44319986)
chr4 (36-220)||(4071811-4071989)
chr4 (60-198)||(24929443-24929580)
chr4 (125-221)||(54325085-54325180)
chr4 (135-221)||(8422897-8422980)
chr4 (135-213)||(30338650-30338727)
chr4 (147-221)||(36734820-36734893)
chr4 (93-230)||(21157686-21157822)
chr4 (142-213)||(11389461-11389531)
chr4 (61-176)||(24091434-24091549)
chr4 (47-210)||(45128280-45128442)
chr4 (128-195)||(53626729-53626795)
chr4 (125-232)||(2980514-2980625)
chr4 (153-226)||(4191661-4191734)
chr4 (87-181)||(7694020-7694114)
chr4 (100-190)||(30581700-30581790)
chr4 (120-218)||(32066453-32066549)
chr4 (150-224)||(32724043-32724116)
chr4 (87-197)||(49219090-49219199)
chr4 (126-204)||(55870390-55870467)
chr4 (106-174)||(18019944-18020013)
chr4 (39-179)||(23819057-23819197)
chr4 (125-242)||(24443944-24444060)
chr4 (88-221)||(30207582-30207713)
chr4 (111-221)||(3891504-3891611)
chr4 (125-221)||(18630607-18630702)
chr4 (145-221)||(19422345-19422420)
chr4 (37-117)||(27123312-27123392)
chr4 (125-181)||(46859896-46859952)
chr4 (126-181)||(13949893-13949948)
chr4 (39-181)||(6987703-6987845)
chr4 (129-211)||(29373939-29374020)
chr4 (87-181)||(31038877-31038971)
chr4 (163-221)||(47970245-47970302)
chr4 (130-212)||(50745936-50746017)
chr4 (41-98)||(2841675-2841732)
chr4 (48-181)||(2996539-2996672)
chr4 (123-204)||(21953217-21953297)
chr4 (108-181)||(32920431-32920504)
chr4 (135-180)||(42321937-42321982)
chr4 (107-168)||(42866047-42866108)
chr4 (87-160)||(43824270-43824343)
chr4 (125-181)||(927442-927498)
chr4 (125-181)||(3175917-3175973)
chr4 (112-203)||(7368090-7368181)
chr4 (89-177)||(18628555-18628643)
chr4 (143-239)||(30024609-30024704)
chr4 (129-177)||(41097295-41097343)
chr4 (150-198)||(41701514-41701561)
chr4 (125-181)||(51630077-51630133)
chr4 (87-159)||(56055739-56055810)
[»] chr2 (66 HSPs)
chr2 (125-221)||(17952749-17952844)
chr2 (55-180)||(9556206-9556331)
chr2 (108-221)||(28803537-28803649)
chr2 (128-181)||(33256706-33256759)
chr2 (110-221)||(33267556-33267659)
chr2 (109-213)||(12215742-12215845)
chr2 (87-198)||(6227701-6227811)
chr2 (125-228)||(18962086-18962188)
chr2 (146-240)||(18884789-18884883)
chr2 (87-181)||(22681195-22681289)
chr2 (87-221)||(7103492-7103624)
chr2 (68-207)||(1939323-1939461)
chr2 (125-181)||(5043608-5043664)
chr2 (125-181)||(11513864-11513920)
chr2 (65-181)||(43141837-43141953)
chr2 (106-217)||(5133703-5133813)
chr2 (125-212)||(13866825-13866911)
chr2 (153-212)||(32098384-32098442)
chr2 (150-213)||(33192128-33192190)
chr2 (55-177)||(33525945-33526067)
chr2 (106-174)||(3059303-3059372)
chr2 (48-221)||(9478226-9478398)
chr2 (88-209)||(25790065-25790185)
chr2 (60-181)||(28039315-28039436)
chr2 (164-221)||(31461365-31461421)
chr2 (128-181)||(33942116-33942169)
chr2 (112-213)||(34054936-34055036)
chr2 (153-210)||(37033982-37034038)
chr2 (34-131)||(41809202-41809299)
chr2 (88-241)||(42817387-42817539)
chr2 (145-240)||(11393433-11393528)
chr2 (145-240)||(11410094-11410189)
chr2 (61-213)||(25609731-25609882)
chr2 (125-221)||(37053521-37053616)
chr2 (62-181)||(14666514-14666633)
chr2 (125-212)||(15377701-15377787)
chr2 (125-176)||(18066099-18066150)
chr2 (82-181)||(18840762-18840861)
chr2 (55-209)||(42457887-42458041)
chr2 (130-232)||(3102609-3102710)
chr2 (135-177)||(3235442-3235483)
chr2 (125-231)||(3673724-3673829)
chr2 (135-181)||(4550743-4550789)
chr2 (135-221)||(13630339-13630424)
chr2 (110-176)||(13736326-13736392)
chr2 (87-209)||(30537537-30537658)
chr2 (150-240)||(35459818-35459907)
chr2 (36-73)||(6547248-6547285)
chr2 (64-141)||(7283002-7283079)
chr2 (34-147)||(11488277-11488388)
chr2 (125-221)||(15780006-15780099)
chr2 (48-160)||(30552614-30552727)
chr2 (137-198)||(31740019-31740079)
chr2 (138-231)||(35329880-35329972)
chr2 (129-221)||(1493565-1493656)
chr2 (110-221)||(6993757-6993866)
chr2 (135-195)||(9395083-9395142)
chr2 (127-179)||(9551547-9551599)
chr2 (125-161)||(25800815-25800851)
chr2 (106-166)||(26282057-26282117)
chr2 (135-219)||(28810431-28810514)
chr2 (137-209)||(29430695-29430765)
chr2 (56-148)||(32821808-32821900)
chr2 (165-221)||(33197327-33197382)
chr2 (135-179)||(37766766-37766810)
chr2 (126-181)||(43299451-43299507)
[»] chr7 (57 HSPs)
chr7 (126-241)||(47003994-47004108)
chr7 (127-213)||(9527140-9527225)
chr7 (36-241)||(27481253-27481457)
chr7 (125-204)||(3802187-3802265)
chr7 (125-220)||(11208377-11208471)
chr7 (40-210)||(27121557-27121718)
chr7 (36-213)||(33894558-33894738)
chr7 (39-197)||(48157082-48157239)
chr7 (111-219)||(28340878-28340985)
chr7 (87-181)||(38010680-38010774)
chr7 (37-210)||(4966094-4966266)
chr7 (127-179)||(17989073-17989125)
chr7 (126-209)||(1417203-1417285)
chr7 (50-204)||(5006484-5006635)
chr7 (125-213)||(23721436-23721528)
chr7 (134-221)||(24973871-24973957)
chr7 (108-179)||(28340427-28340498)
chr7 (106-181)||(29363484-29363559)
chr7 (50-212)||(3500940-3501100)
chr7 (125-175)||(5369739-5369789)
chr7 (106-176)||(10190766-10190836)
chr7 (87-213)||(27378838-27378962)
chr7 (87-213)||(28165026-28165151)
chr7 (127-181)||(31002727-31002781)
chr7 (55-160)||(33645939-33646044)
chr7 (82-176)||(44821930-44822024)
chr7 (135-181)||(45777229-45777275)
chr7 (135-213)||(45813238-45813315)
chr7 (110-210)||(2048075-2048172)
chr7 (125-218)||(27548193-27548285)
chr7 (150-231)||(45593792-45593872)
chr7 (125-194)||(46825052-46825120)
chr7 (126-198)||(2727409-2727480)
chr7 (153-221)||(3241368-3241435)
chr7 (153-221)||(7244629-7244696)
chr7 (125-181)||(12110326-12110382)
chr7 (129-213)||(33709382-33709466)
chr7 (54-218)||(46081963-46082129)
chr7 (56-148)||(46281119-46281211)
chr7 (34-181)||(3468580-3468727)
chr7 (140-211)||(35536044-35536114)
chr7 (87-198)||(40688996-40689106)
chr7 (82-181)||(44151485-44151584)
chr7 (155-213)||(5276159-5276216)
chr7 (59-145)||(9423576-9423662)
chr7 (153-219)||(15328535-15328600)
chr7 (164-210)||(42656453-42656498)
chr7 (157-198)||(2999141-2999181)
chr7 (125-213)||(7274396-7274482)
chr7 (145-242)||(24975810-24975906)
chr7 (111-160)||(25507336-25507385)
chr7 (87-212)||(37064230-37064357)
chr7 (135-231)||(5373142-5373237)
chr7 (106-198)||(22759136-22759227)
chr7 (125-221)||(27492722-27492817)
chr7 (34-78)||(36537977-36538021)
chr7 (153-181)||(44178999-44179027)
[»] scaffold0024 (1 HSPs)
scaffold0024 (48-242)||(27482-27675)
[»] chr1 (72 HSPs)
chr1 (107-213)||(15361646-15361753)
chr1 (56-198)||(30259465-30259607)
chr1 (82-181)||(39347972-39348071)
chr1 (126-197)||(49517021-49517091)
chr1 (89-212)||(52013833-52013956)
chr1 (87-181)||(10199418-10199512)
chr1 (56-210)||(17420141-17420294)
chr1 (129-203)||(33527199-33527272)
chr1 (125-206)||(7218122-7218202)
chr1 (36-181)||(15581220-15581365)
chr1 (125-221)||(4363680-4363774)
chr1 (102-174)||(8130409-8130481)
chr1 (125-181)||(48830124-48830180)
chr1 (36-119)||(4868428-4868510)
chr1 (82-181)||(12477292-12477391)
chr1 (142-197)||(15360845-15360899)
chr1 (90-221)||(17269177-17269307)
chr1 (90-181)||(25479547-25479638)
chr1 (93-204)||(33723398-33723508)
chr1 (135-213)||(5941505-5941582)
chr1 (82-180)||(21012757-21012855)
chr1 (82-181)||(35017540-35017641)
chr1 (110-180)||(44422666-44422736)
chr1 (163-221)||(48282060-48282118)
chr1 (137-214)||(3319992-3320069)
chr1 (124-181)||(15565879-15565936)
chr1 (125-198)||(17631149-17631221)
chr1 (125-178)||(25006082-25006135)
chr1 (50-147)||(27140478-27140575)
chr1 (108-181)||(27738211-27738284)
chr1 (82-182)||(6279364-6279464)
chr1 (82-218)||(6981422-6981557)
chr1 (125-209)||(17422986-17423070)
chr1 (130-178)||(37272639-37272687)
chr1 (150-221)||(45107550-45107619)
chr1 (164-220)||(46499941-46499996)
chr1 (150-213)||(781192-781255)
chr1 (145-180)||(4215339-4215374)
chr1 (126-189)||(5592734-5592797)
chr1 (129-216)||(6265026-6265112)
chr1 (125-180)||(10581125-10581180)
chr1 (135-198)||(17628549-17628611)
chr1 (125-176)||(19462814-19462865)
chr1 (125-211)||(23544687-23544773)
chr1 (106-181)||(28467337-28467411)
chr1 (87-186)||(30257644-30257743)
chr1 (86-181)||(34179881-34179976)
chr1 (109-240)||(40304087-40304216)
chr1 (153-227)||(48748659-48748731)
chr1 (125-219)||(4548649-4548743)
chr1 (126-204)||(5756735-5756812)
chr1 (55-181)||(15515507-15515633)
chr1 (87-181)||(16322815-16322909)
chr1 (95-161)||(25005815-25005881)
chr1 (65-204)||(28689440-28689580)
chr1 (129-171)||(29415642-29415684)
chr1 (143-213)||(45999354-45999423)
chr1 (61-198)||(3924574-3924710)
chr1 (82-159)||(6659502-6659579)
chr1 (83-196)||(12564505-12564616)
chr1 (87-160)||(23902077-23902150)
chr1 (135-241)||(29666367-29666473)
chr1 (145-242)||(29793991-29794086)
chr1 (140-181)||(47877088-47877129)
chr1 (106-147)||(51929804-51929845)
chr1 (125-181)||(10586420-10586476)
chr1 (129-209)||(21516312-21516391)
chr1 (144-180)||(28788605-28788641)
chr1 (129-181)||(30371114-30371166)
chr1 (150-210)||(35080143-35080202)
chr1 (125-181)||(45205034-45205090)
chr1 (149-213)||(45804212-45804275)
[»] scaffold0590 (1 HSPs)
scaffold0590 (150-221)||(1147-1217)
[»] scaffold0508 (1 HSPs)
scaffold0508 (125-244)||(9823-9941)
[»] scaffold0275 (1 HSPs)
scaffold0275 (150-221)||(2758-2828)
[»] scaffold0053 (1 HSPs)
scaffold0053 (129-213)||(20114-20197)
[»] scaffold0147 (1 HSPs)
scaffold0147 (51-147)||(12678-12775)
[»] scaffold0584 (1 HSPs)
scaffold0584 (87-159)||(1343-1414)
[»] scaffold0446 (1 HSPs)
scaffold0446 (87-159)||(5469-5540)
[»] scaffold0072 (1 HSPs)
scaffold0072 (150-242)||(4878-4969)


Alignment Details
Target: scaffold0110 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 36 - 348
Target Start/End: Original strand, 4182 - 4494
Alignment:
Q  36 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4182 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccgtaagctttctagcatagcttatta 4281  T
Q  136 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcct 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4282 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcct 4381  T
Q  236 ataagcgataaactaatctgttatctaagtattaatgtatgatggttgcttttttaagtgttttttcaatgctttggagctctgtagttcatagaccact 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4382 ataagcgataaactaatctgttatctaagtattaatgtatgatggttgcttttttaagtgttttttcaatgctttggagctctgtagttcatagaccaca 4481  T
Q  336 ggtacactttaat 348  Q
    |||| ||||||||    
T  4482 ggtagactttaat 4494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 4e-26; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 37 - 221
Target Start/End: Complemental strand, 38462390 - 38462208
Alignment:
Q  37 acttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaa 136  Q
    |||||| || ||| ||||||||| ||||  |||||| |||||  ||| | |||||||||||| | ||| |||||||||||| ||| | ||||||||| ||    
T  38462390 acttgtaagattgattgtgagagcttatacaaacaa-ttatgacttgaccataagttgttttcagcttatttccataagctatcttggatagcttatgaa 38462292  T
Q  137 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||| ||||||  ||||||||||| ||||||||||||||||||| |||  ||||||||||| ||||| |||| ||| |||||||    
T  38462291 aacagtttatagcatatatgaaaacagtttgactttattttatct-tttggtatagaaatagcttataaataaacacttatatga 38462208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 23785340 - 23785221
Alignment:
Q  62 tatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaac 161  Q
    |||||||||| ||||||   |||| |||||||||||| | |||||||||||||||| || |  | ||||| | ||||||| |||||| ||||||||| ||    
T  23785340 tatggaaacagcttatggcgtgtccataagttgttttcagcttgtttccataagctctccatgagagcttgtgaaaacagtttatagcttatatgaatac 23785241  T
Q  162 ggtttgactttattttatct 181  Q
     |||||||||||||||||||    
T  23785240 agtttgactttattttatct 23785221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 40122763 - 40122884
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 186  Q
    |||||||||||| | ||| ||||||| | |||| ||| ||||||||| |||||| ||||||| || ||||||||| ||||||||||||||||||| |||     
T  40122763 ataagttgtttttagcttatttccattaactttttaggatagcttataaaaacaacttatagctt-tatgaaaacagtttgactttattttatct-tttg 40122860  T
Q  187 ttatagaaatagattatatataag 210  Q
    |||| ||||||| ||||| |||||    
T  40122861 ttattgaaatagcttatacataag 40122884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 20192664 - 20192741
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||| ||| ||||| |||||| ||||| ||||||||    
T  20192664 aaaacagcttatagattatatgaaaactgtttgactttattttatct-tttgttatataaatagcttatacataagcac 20192741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 207
Target Start/End: Original strand, 36646355 - 36646511
Alignment:
Q  50 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 149  Q
    |||| ||||| |||||||||| |||||||   |||| ||||| |||||| ||||| |||| |||| || ||||| ||||||||| ||||||  |||||      
T  36646355 tttgggagagcttatggaaaccacttatggcatgtccataagctgttttcatcttatttctataaactctctaggatagcttatgaaaacaagttataac 36646454  T
Q  150 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatat 207  Q
    ||||||||||||  ||  |||||||||||||| ||| | |||||||||| ||||||||    
T  36646455 ttatatgaaaacaattatactttattttatct-tttgtcatagaaatagcttatatat 36646511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 109 - 204
Target Start/End: Original strand, 24887315 - 24887409
Alignment:
Q  109 ccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 204  Q
    ||||||||| || || ||||||||| |||||||||| ||| ||||||||| || |||||||||||||||||||  || |||||||||||| |||||    
T  24887315 ccataagctctccaggatagcttatgaaaacagcttttagcttatatgaatacagtttgactttattttatct-attgttatagaaatagcttata 24887409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 43115167 - 43115048
Alignment:
Q  36 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 135  Q
    |||||||||| |||||||  |||||||||||||||||||||||   |||| |||| ||||||| | ||| |||||||||||| || |  |||| | || |    
T  43115167 cacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagctctcaatgatagttcatga 43115068  T
Q  136 aaacagcttatagtttatat 155  Q
    ||||| ||||||| ||||||    
T  43115067 aaacaacttatagcttatat 43115048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 54775219 - 54775079
Alignment:
Q  55 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 154  Q
    ||||||||||||||| ||||||||   |||| ||||| || ||| ||||| ||| ||||| || || |  ||| ||||  ||||||||||||| || |||    
T  54775219 gagagtttatggaaataacttatgttatgtccataagctgctttcatcttattttcataaactctccatgataacttacgaaaacagcttataatt-ata 54775121  T
Q  155 tgaaaacggtttgactttattttatctcttttttatagaaata 197  Q
    | |||| |||||||||||||||||||| ||| |||||||||||    
T  54775120 taaaaatggtttgactttattttatct-tttgttatagaaata 54775079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 36783382 - 36783454
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 198  Q
    ||||||||| ||||||||| |||||||||||||||||  ||| |||||||||||||| |||  |||||||||||    
T  36783382 atagcttatgaaaacagctaatagtttatatgaaaacaattttactttattttatct-tttggtatagaaatag 36783454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 1816619 - 1816488
Alignment:
Q  111 ataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttat-agaaatagattatatataa 209  Q
    ||||||| || || ||||||||| |||||| ||||||  |||||  ||||| ||||||||||||||||||| ||| |||| | |||||| ||||| || |    
T  1816619 ataagctctccagtatagcttatgaaaacaacttatatcttatacaaaaacagtttgactttattttatct-tttattataaaaaatagtttatacatta 1816521  T
Q  210 gcacatatatgagaaacacttatcctataagcg 242  Q
    || | ||||||| ||||| |||| |||||||||    
T  1816520 gctcttatatgataaacaattatgctataagcg 1816488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 2201150 - 2201094
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||| || |||||||||||||| |||||||||||| |||||||||| ||||||||    
T  2201150 atagctaatgaaaacagcttatagcttatatgaaaacagtttgactttgttttatct 2201094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 224
Target Start/End: Complemental strand, 2321288 - 2321099
Alignment:
Q  37 acttgtgagcttgtttgtgagagtttatggaaacaactta-tgcattgtcaataagttgttttaatcttgtttccataagctttc--tagcatagcttat 133  Q
    ||||||||| ||||||| |||||||||||||||||||||| | |||   || ||||||||||| |  |  |||||||| ||| ||  ||| |||||||||    
T  2321288 acttgtgagattgtttgagagagtttatggaaacaacttattacatgcccattaagttgttttcagttaatttccataggctctctataggatagcttat 2321189  T
Q  134 -taaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaa 224  Q
      ||||||   | |||||||||||||||  ||||||||||| ||||||| ||| |||| ||| ||| |||||  ||||||||||||||||||    
T  2321188 gaaaaacaagatctagtttatatgaaaatagtttgacttta-tttatct-tttgttattgaattagcttatacgtaagcacatatatgagaa 2321099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 179
Target Start/End: Original strand, 14548680 - 14548823
Alignment:
Q  36 cacttgtgagcttgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatt 134  Q
    ||||||||||  |||||| ||||| ||||| ||||||| |||| |||| | |||| | |||||| | ||| |||||||||||| || || ||| |||||     
T  14548680 cacttgtgagactgtttgagagagcttatgaaaacaacgtatgacatttt-aataggctgttttcagcttatttccataagctctccagaataacttatg 14548778  T
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttat 179  Q
    |||||| ||||||| ||||||||||||  ||||| || |||||||    
T  14548779 aaaacaacttatagcttatatgaaaactttttgatttgattttat 14548823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 20502116 - 20502219
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaac-ggtttgactttattttatctcttttttatagaaataga------ttatatataagcacatat 217  Q
    ||||||||| ||||||||||||||  ||||||||||| | ||||||||||||| |||| ||| | |||||||||||      |||||||||||||| |||    
T  20502116 atagcttatgaaaacagcttatagcgtatatgaaaacagttttgactttatttgatctttttgtcatagaaatagaaatagcttatatataagcacttat 20502215  T
Q  218 atga 221  Q
    ||||    
T  20502216 atga 20502219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 25453892 - 25453968
Alignment:
Q  110 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 186  Q
    ||||||||||| || |||| |||| |||| || |||||| ||||| |||||| ||||||||||||||||||| ||||    
T  25453892 cataagctttccaggatagtttatgaaaataggttataggttatacgaaaacagtttgactttattttatctgtttt 25453968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 23315667 - 23315592
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||||| | ||| |||||||||  ||||| |||||||  |||||||||||  ||||||||||||||||||    
T  23315667 tttccataagctctttagaatagcttatggaaacatcttatagcctatatgaaaacaatttgactttattttatct 23315592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 49586984 - 49587042
Alignment:
Q  145 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 204  Q
    |||| |||||||||||| ||||||||||||||||||| ||| |||||||||||| |||||    
T  49586984 atagcttatatgaaaacagtttgactttattttatct-tttgttatagaaatagcttata 49587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 24785265 - 24785171
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||||| | ||| ||| |||||||| || || ||||||||| ||||||  |||||| |||||  ||||| | |||||||||||||||||    
T  24785265 ataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaacacgttatagattatacaaaaacagattgactttattttatct 24785171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 31337435 - 31337505
Alignment:
Q  111 ataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||||||  |||||||| || ||| ||||||  |||||| ||||| |||||||||||||||||||    
T  31337435 ataagctttctagattagcttatgaatacaacttataacttatataaaaacagtttgactttattttatct 31337505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 146
Target Start/End: Complemental strand, 37273233 - 37273135
Alignment:
Q  48 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttat 146  Q
    |||||| ||||| ||||||||||||||||||   |||| |||||||||||| | ||| |||||||||| | || |  ||||||||| ||||||| ||||    
T  37273233 tgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaacagtttat 37273135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 41028919 - 41029020
Alignment:
Q  145 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataagcgat 244  Q
    |||| |||| ||||||| | ||||||||||||| ||| ||| |||||||||||| ||||| |||||||| ||||||| || || |||  ||||||| |||    
T  41028919 atagcttatttgaaaacagattgactttattttttct-tttgttatagaaatagcttatacataagcacttatatgataagcatttaagctataagagat 41029017  T
Q  245 aaa 247  Q
    |||    
T  41029018 aaa 41029020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 16790181 - 16790249
Alignment:
Q  170 tttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataa 239  Q
    |||||||||||| ||| |||||||||||  |||||||||||||| ||||||| |||| ||||| ||||||    
T  16790181 tttattttatct-tttgttatagaaataacttatatataagcacttatatgataaacgcttatgctataa 16790249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 20874339 - 20874388
Alignment:
Q  112 taagctttctagcatagcttattaaaacagcttatagtttatatgaaaac 161  Q
    |||||| | ||| ||||||||| |||||||||||||||||||||||||||    
T  20874339 taagctatttaggatagcttatgaaaacagcttatagtttatatgaaaac 20874388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 42038996 - 42038940
Alignment:
Q  140 agcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 197  Q
    ||||||||| ||||||||||||||||||||||||||  |||| ||| |||||||||||    
T  42038996 agcttatagcttatatgaaaacggtttgactttattagatct-tttgttatagaaata 42038940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 221
Target Start/End: Original strand, 24158532 - 24158645
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatat 205  Q
    |||||||||||| || || ||||||||| ||||||||||||   ||||||  |||| |||| |||||| |||||   ||| |||||||||||  |||||     
T  24158532 tttccataagctctccaggatagcttatgaaaacagcttattacttatat--aaacagtttcactttactttattcatttgttatagaaataacttatac 24158629  T
Q  206 ataagcacatatatga 221  Q
    |||||||| |||||||    
T  24158630 ataagcacttatatga 24158645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 27792932 - 27792789
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 186  Q
    |||||||||||| | ||| |||| ||||||| |  |  |||| |||| |||||| |||  || |||||||||||  ||||||| ||||||||||| |||     
T  27792932 ataagttgttttcagcttatttctataagctctacatgatagtttatgaaaacaacttgcagcttatatgaaaatagtttgaccttattttatct-tttg 27792834  T
Q  187 ttatagaaatagattatatataagcacatatatgagaaacactta 231  Q
    || | ||||||| ||||| |||||||| ||||||| |||| ||||    
T  27792833 tttttgaaatagcttatacataagcacttatatgataaactctta 27792789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 33965537 - 33965592
Alignment:
Q  125 atagcttattaaaacagcttatag--tttatatgaaaacggtttgactttatttta 178  Q
    ||||||||| |||||| |||||||  ||||||||||||| ||||||||||||||||    
T  33965537 atagcttatgaaaacatcttatagcttttatatgaaaacagtttgactttatttta 33965592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 239
Target Start/End: Original strand, 43116478 - 43116589
Alignment:
Q  127 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaac 226  Q
    ||||||| |||||  ||||||| |||||||||||  |||||| || ||||||||| ||| |||||||||||| ||| | |||| ||| | ||||| ||||    
T  43116478 agcttatgaaaacgacttatagcttatatgaaaattgtttgatttgattttatct-tttgttatagaaatagcttacacataaacacttgtatgataaac 43116576  T
Q  227 acttatcctataa 239  Q
    | |||| ||||||    
T  43116577 atttatgctataa 43116589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 1395688 - 1395606
Alignment:
Q  130 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    |||| ||||||| | |||| |||||||||||   |||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  1395688 ttatgaaaacagttcatagcttatatgaaaataatttgactttattttatct-tttgttatagaaatagcttatacatatgcac 1395606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 195
Target Start/End: Complemental strand, 2318703 - 2318596
Alignment:
Q  89 aagttgttttaatcttgtttccataagctttcta-gcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttt 187  Q
    |||||||||| | ||| |||| ||||||| || | | ||| ||||| |||||| ||||||||||||||||||||  ||||| || |||||||||  || |    
T  2318703 aagttgttttcagcttatttctataagctctccaagaataacttataaaaacaacttatagtttatatgaaaacaatttgatttgattttatcttgttgt 2318604  T
Q  188 tatagaaa 195  Q
    ||||||||    
T  2318603 tatagaaa 2318596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 23249596 - 23249529
Alignment:
Q  109 ccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 176  Q
    ||||||||||||||  ||||||||| |||||| ||||||  |||||| ||||| ||||||||| ||||    
T  23249596 ccataagctttctaagatagcttatgaaaacaacttatatcttatataaaaacagtttgacttcattt 23249529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 28306180 - 28306102
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 204  Q
    ||||||||| |||||| ||| ||  |||||||||||| |||||||||||||||| || ||| ||||||| |||| |||||    
T  28306180 atagcttatgaaaacaacttgtaacttatatgaaaacagtttgactttatttta-ctttttgttatagagatagcttata 28306102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 41452609 - 41452494
Alignment:
Q  61 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 160  Q
    |||| |||||||||||||   |||| ||||| |||||| | ||| |||||| ||  | || || ||||||||| ||||||||||| |  | |||||||||    
T  41452609 ttatagaaacaacttatgatatgtctataagctgttttcaccttatttccacaacttctccaggatagcttatgaaaacagcttacaactaatatgaaaa 41452510  T
Q  161 cggtttgactttattt 176  Q
    | ||||||||||||||    
T  41452509 cagtttgactttattt 41452494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 2865718 - 2865789
Alignment:
Q  136 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 209  Q
    ||||| ||||||| ||||||||||||  ||||||||| |||||   |||| |||||||||||| ||||||||||    
T  2865718 aaacaacttataggttatatgaaaacaatttgactttgtttta--actttgttatagaaatagcttatatataa 2865789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 19679376 - 19679430
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 179  Q
    |||| |||| |||||| ||||||| ||||| |||||| |||||||||||||||||    
T  19679376 atagtttataaaaacaacttatagcttataagaaaacagtttgactttattttat 19679430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 21872302 - 21872376
Alignment:
Q  108 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctc 182  Q
    ||||||| ||||| || ||||||||| |||||| ||||||| |||||| ||||   |||||| ||||||||||||    
T  21872302 tccataaactttccaggatagcttatgaaaacaacttatagcttatatcaaaaaaatttgaccttattttatctc 21872376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 31075717 - 31075604
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttg-actttattttatctcttttttatagaaatagattatatataagcacatatatgaga 223  Q
    ||||||| | ||||||| |||||||||| ||||||||| |||| |||||| ||||| | ||| ||| | |||||| ||||||||||| || ||||||| |    
T  31075717 atagcttgtgaaaacagtttatagtttacatgaaaacgatttgtactttactttatat-tttgttaaataaatagcttatatataagtacttatatgaca 31075619  T
Q  224 aacacttatcctata 238  Q
    | | ||||| |||||    
T  31075618 agcgcttatactata 31075604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 1217779 - 1217884
Alignment:
Q  56 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatat 155  Q
    |||| ||| ||||||| ||||||   |||| |||||||||||| |||||  || |||||| | || || ||||||||| |||||||||||||  ||| ||    
T  1217779 agagcttacggaaacagcttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaacagcttataacttacat 1217878  T
Q  156 gaaaac 161  Q
    ||||||    
T  1217879 gaaaac 1217884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 3467446 - 3467491
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatc 180  Q
    |||||| |||||||| |||||||||||  |||||||||||||||||    
T  3467446 aaaacaacttatagtctatatgaaaacaatttgactttattttatc 3467491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 33405215 - 33405268
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttta 178  Q
    ||||||||| |||||||||||||| ||||||||||||   || |||||||||||    
T  33405215 atagcttatgaaaacagcttatagcttatatgaaaacaaattaactttatttta 33405268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 54965517 - 54965472
Alignment:
Q  136 aaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||| ||| |||||||||||||||  |||||||||||||||||||    
T  54965517 aaacaacttgtagtttatatgaaaattgtttgactttattttatct 54965472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 8007761 - 8007828
Alignment:
Q  143 ttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 211  Q
    |||||| |||||||| ||| ||||||||||| ||||||| ||| ||||||||| || ||||| ||||||    
T  8007761 ttatagcttatatgataacagtttgactttactttatct-tttgttatagaaacagcttatacataagc 8007828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 12923383 - 12923466
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatat 219  Q
    |||||| ||||||| ||||| |||| | ||||||||||||||||||| ||| ||| || ||||| ||||| | |||||| |||||    
T  12923383 aaaacaacttatagcttataagaaagcagtttgactttattttatct-tttattacagcaatagcttatacacaagcacttatat 12923466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 15304417 - 15304472
Alignment:
Q  147 agtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 203  Q
    |||||||||||||||  ||| |||||||||||||| ||| |||||||||||| ||||    
T  15304417 agtttatatgaaaacaatttaactttattttatct-tttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 22232848 - 22232753
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||||| |||| ||||||    |||||||||||| ||||||||||||||||||  ||| ||||| |||||| ||||| || ||||  |||||||    
T  22232848 atagcttatgaaaatagcttacgacttatatgaaaacagtttgactttattttatc-atttgttatataaatagcttatacatgagcatttatatga 22232753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 24235731 - 24235802
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 197  Q
    ||||||||| |||||| ||||||| ||||||  |||  |||||||||||| |||||| ||| |||||||||||    
T  24235731 atagcttatgaaaacaacttatagcttatattcaaatagtttgactttatattatct-tttgttatagaaata 24235802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 44374720 - 44374787
Alignment:
Q  153 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    |||||||||  |||||||||||||||||| ||| ||| ||| |||| ||||| |||||||| |||||||    
T  44374720 tatgaaaacaatttgactttattttatct-tttgttaaagatatagcttatacataagcacttatatga 44374787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 37 - 204
Target Start/End: Original strand, 281808 - 281974
Alignment:
Q  37 acttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaa 136  Q
    |||||||||  |||||| ||||| | |||||| |||||||||   |||| |||||||||||| | ||| ||||||| |||| ||||| ||||||||| ||    
T  281808 acttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagcttatgaa 281907  T
Q  137 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 204  Q
     ||||||||||| ||||||||||||   ||||||||||||||||| ||| |||||| ||||| |||||    
T  281908 cacagcttatagcttatatgaaaacaagttgactttattttatct-tttgttataggaatagcttata 281974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 10016568 - 10016463
Alignment:
Q  124 catagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgaga 223  Q
    |||||||||| |||||||||||| | |||||||| ||| |||| | |||||||||||| |||  | ||||||||| ||||| ||||| || |||||||||    
T  10016568 catagcttatgaaaacagcttatggcttatatgagaacagtttaaatttattttatct-tttggtttagaaatagcttatacataaggacttatatgaga 10016470  T
Q  224 aacactt 230  Q
    |||||||    
T  10016469 aacactt 10016463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 61 - 198
Target Start/End: Complemental strand, 2117489 - 2117353
Alignment:
Q  61 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 160  Q
    |||| ||||||| |||||   |||| ||||| |||||| | ||| |||| ||||||| ||||| ||| ||||| |||||| ||||||| |||||||||||    
T  2117489 ttatagaaacaatttatggcatgtctataagctgtttttagcttatttcaataagctctctaggataacttatgaaaacaacttatagattatatgaaaa 2117390  T
Q  161 cggtttgactttattttatctcttttttatagaaatag 198  Q
      |||||||||| ||||||| |||| | ||||||||||    
T  2117389 tagtttgactttgttttatc-ctttgtcatagaaatag 2117353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 3181120 - 3181172
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||||||||    
T  3181120 cttatgaaaacagtttatggtttatatgaaaacggtttgactttattttatct 3181172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 29274281 - 29274363
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagca 212  Q
    ||||| ||||||| |||||| ||||||||||||  |||||||||||||||||| |||  ||||||||||| ||||| |||||||    
T  29274281 cttatgaaaacagtttatagcttatatgaaaacaatttgactttattttatct-tttgctatagaaatagcttatacataagca 29274363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 5329065 - 5328925
Alignment:
Q  55 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 154  Q
    ||||||||||||||| ||||||||   |||| ||||| || ||| ||||| ||| ||||| || || |  ||| ||||  ||||||||||||| || |||    
T  5329065 gagagtttatggaaataacttatgttatgtccataagctgctttcatcttattttcataaactctccatgataacttacgaaaacagcttataatt-ata 5328967  T
Q  155 tgaaaacggtttgactttattttatctcttttttatagaaata 197  Q
    | |||| |||||||||||||||||||| ||| |||||||||||    
T  5328966 taaaaatggtttgactttattttatct-tttgttatagaaata 5328925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 5550144 - 5550036
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcc 234  Q
    |||||||||||||| ||||||||||||  ||||||||||| ||||||| || |||| ||||||   |||| |||||||| |||||||  | | ||||| |    
T  5550144 aaaacagcttatagcttatatgaaaacaatttgactttatgttatctc-ttattatcgaaatactatatacataagcacttatatgaccagcgcttatgc 5550046  T
Q  235 tataagcgat 244  Q
    ||||||||||    
T  5550045 tataagcgat 5550036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 22742384 - 22742304
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 210  Q
    ||||| |||| ||||||||| ||||||||||||  ||||||||||||||||| |||| ||||| |||||| ||||| |||||    
T  22742384 cttataaaaatagcttatagcttatatgaaaacaatttgactttattttatc-ctttgttatacaaatagcttatagataag 22742304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 2027455 - 2027526
Alignment:
Q  126 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 198  Q
    |||||||| | |||||||||||| |||||||||||  ||||||||||||||||||| ||| ||||| ||||||    
T  2027455 tagcttatgagaacagcttataggttatatgaaaatagtttgactttattttatct-tttgttataaaaatag 2027526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 4248980 - 4248885
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||||  |||||| ||||| |||||||  ||| |  |||||||||||||||||| ||| |||| ||||||| |||||||||||||| |||||||    
T  4248980 atagcttaggaaaacaccttattgtttatacaaaatcaatttgactttattttatct-tttgttattgaaatagcttatatataagcacttatatga 4248885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 231
Target Start/End: Original strand, 8470054 - 8470141
Alignment:
Q  143 ttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactta 231  Q
    ||||||||| ||||||||||||||||||||||||| ||  ||| ||| |||||||| |||| ||||||||| |||| || || ||||||    
T  8470054 ttatagtttttatgaaaacggtttgactttattttctc-atttgttacagaaatagcttatttataagcacttatacgataagcactta 8470141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 219
Target Start/End: Complemental strand, 9027669 - 9027506
Alignment:
Q  56 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagct-ttctagcatagcttattaaaacagcttatagtttata 154  Q
    |||| ||||||||| ||||||||   |||| |||||||||||| | ||| ||| |||||||| |||| | |||| |||   || ||||||||   |||||    
T  9027669 agagcttatggaaataacttatgacatgtccataagttgttttcagcttattttcataagctcttcttggataggttaacgaaccagcttattacttata 9027570  T
Q  155 tgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatat 219  Q
    | ||||| ||||||||||||||||||| | | || ||||||||| ||||| |||||||| |||||    
T  9027569 ttaaaacagtttgactttattttatct-tctattgtagaaatagcttatagataagcacttatat 9027506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 136 - 240
Target Start/End: Original strand, 10452419 - 10452522
Alignment:
Q  136 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcct 235  Q
    ||||| ||||||| |||||||||||  |||||| |||||||||| | ||| |||||||||||| ||||| ||||||||  |||||| |  ||||||| ||    
T  10452419 aaacaacttatagcttatatgaaaatagtttgattttattttatat-tttgttatagaaatagcttatacataagcactgatatgatagccacttatgct 10452517  T
Q  236 ataag 240  Q
    |||||    
T  10452518 ataag 10452522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 161
Target Start/End: Original strand, 28088207 - 28088306
Alignment:
Q  61 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 160  Q
    ||||||||||||||||| ||| ||| ||| |||||||| | ||| ||||||| |||| || |  ||||||||| ||||||| |||||| |||||||||||    
T  28088207 ttatggaaacaacttatacat-gtctataggttgttttgagcttatttccatgagctctccatgatagcttatgaaaacagtttatagcttatatgaaaa 28088305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 181
Target Start/End: Original strand, 31671078 - 31671178
Alignment:
Q  81 ttgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc 180  Q
    ||||| || ||||||||| | ||| ||| |||||||| ||||| |||| |||  |||||||||||||| ||||||||||||  ||| ||||| |||||||    
T  31671078 ttgtctatcagttgttttcagcttattttcataagctatctaggatagtttacgaaaacagcttatagcttatatgaaaacaatttaactttgttttatc 31671177  T
Q  181 t 181  Q
    |    
T  31671178 t 31671178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 3785725 - 3785804
Alignment:
Q  102 cttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||  ||||||| || || ||||||||  |||||||||||||| ||||| |||||| |||| ||||||||||||||    
T  3785725 cttgtttttataagctctccagaatagcttacaaaaacagcttatagcttatacgaaaacagtttaactttattttatct 3785804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 221
Target Start/End: Original strand, 8420154 - 8420340
Alignment:
Q  34 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 133  Q
    ||||||||||||  |||| ||||||| |||| |||| | ||||||   |||| | ||| | |||| | ||| |||||||||||| || |  ||||||||     
T  8420154 aacacttgtgagactgttagtgagagcttatagaaatagcttatgacatgtccacaagctattttcaacttatttccataagctctccattatagcttac 8420253  T
Q  134 taaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
     | ||||||||||| ||||||| || || ||||||||||||||||||  ||| ||| |||||||  || || |||||||| |||||||    
T  8420254 gagaacagcttatattttatataaacacagtttgactttattttatc-atttattaaagaaataacttgtacataagcacttatatga 8420340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 34429747 - 34429809
Alignment:
Q  134 taaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 197  Q
    ||||||| ||||||||||||| |||||| ||| |||||||||||||||| || |||||||||||    
T  34429747 taaaacaacttatagtttataagaaaacagttagactttattttatctc-ttattatagaaata 34429809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 5637313 - 5637375
Alignment:
Q  165 ttgactttattttatc-tcttttttatagaaatagattatatataagcacatatatgagaaac 226  Q
    |||||||||||||||| ||||||| |||||||||| ||||| |||||||| ||||||| ||||    
T  5637313 ttgactttattttatcttctttttgatagaaatagtttataaataagcacttatatgataaac 5637375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 203
Target Start/End: Original strand, 9093528 - 9093681
Alignment:
Q  50 tttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatag 148  Q
    |||||||||| ||||| ||| | |||||| |||||| |||||  |||||| | ||| ||| | |||| | ||||  | ||||||| ||||||||||||||    
T  9093528 tttgtgagagcttatgaaaatagcttatgacattgttaataacctgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatag 9093627  T
Q  149 tttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 203  Q
     ||||| ||||||  ||| |||||||||||||| |||  ||||||||||| ||||    
T  9093628 cttatacgaaaacaatttaactttattttatct-tttgatatagaaatagcttat 9093681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 221
Target Start/End: Complemental strand, 10154281 - 10154148
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 186  Q
    |||||||||||| |  || ||||||||||||||  |   |||| ||| |||  ||||||||  |||||||||||| ||||||||||||||||||| ||||    
T  10154281 ataagttgttttcagtttatttccataagcttttcatgctagcctatgaaagtagcttataacttatatgaaaacagtttgactttattttatct-tttt 10154183  T
Q  187 ttatagaaatagattatatataagcacatatatga 221  Q
     |||||||| || || || | |||||| |||||||    
T  10154182 ctatagaaacagcttgtacagaagcacttatatga 10154148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 160
Target Start/End: Original strand, 10616514 - 10616624
Alignment:
Q  50 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 149  Q
    |||| ||||| ||||||||||||||||||   ||||  |||||||| || | ||| |||  ||||||| || |  ||||||||||||||| ||||||| |    
T  10616514 tttgggagagcttatggaaacaacttatgacatgtccgtaagttgtgttcagcttatttttataagctctccaaaatagcttattaaaacggcttatatt 10616613  T
Q  150 ttatatgaaaa 160  Q
    |||||||||||    
T  10616614 ttatatgaaaa 10616624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 1403018 - 1402946
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 198  Q
    ||||||||| ||||||  |||||| |||||||||||  |||| |||||||||||||| ||| ||||||||||||    
T  1403018 atagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattttatct-tttgttatagaaatag 1402946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 2514686 - 2514610
Alignment:
Q  163 gtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataag 240  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| |||||||| || |||| || || |||| |||||||    
T  2514686 gtttgactttattttatct-tttattatagaaatagcttatacataagcacttacatgataagcatttatgctataag 2514610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 5623178 - 5623125
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttta 178  Q
    ||||||||| |||||| ||||||||||||||||||||  |||| ||||||||||    
T  5623178 atagcttatgaaaacaacttatagtttatatgaaaactatttggctttatttta 5623125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 2460111 - 2460191
Alignment:
Q  37 acttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagct 117  Q
    |||||||||  |||||| ||||| ||||||||||||||||||   ||||  ||||||||||| | ||| ||||||||||||    
T  2460111 acttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagct 2460191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 197
Target Start/End: Complemental strand, 4006736 - 4006665
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 197  Q
    ||||||||| |||||| ||||||| |||||| |||||  |||||||||||||||||  ||| |||||||||||    
T  4006736 atagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatc-atttgttatagaaata 4006665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 181
Target Start/End: Complemental strand, 4081013 - 4080884
Alignment:
Q  50 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 149  Q
    |||| |||| |||||| |||||||||||||  |||  |||||||||||| | ||| ||||  |||||| |  || ||||||| |  ||| |||||||| |    
T  4081013 tttgagagattttatgaaaacaacttatgccatgttcataagttgttttcaacttatttc--taagctctgaagaatagcttctgcaaaaagcttataat 4080916  T
Q  150 ttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||||| |||||||||| ||| ||||    
T  4080915 ttatatgaaaaccgtttgactttgtttcatct 4080884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 24774748 - 24774693
Alignment:
Q  157 aaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    ||||| ||||||||||||||||| | ||| |||||||||||| ||||||||||||||    
T  24774748 aaaacagtttgactttattttatat-tttgttatagaaatagtttatatataagcac 24774693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 240
Target Start/End: Original strand, 32386578 - 32386725
Alignment:
Q  92 ttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttata 191  Q
    ||||||| | ||| ||| |||||||| || || ||| || || |||||| | ||||  ||||||||||||  |||||| ||||||||||| ||| |||      
T  32386578 ttgttttcagcttattttcataagctctccaggataactaatgaaaacaacgtataccttatatgaaaacaatttgaccttattttatct-tttcttagt 32386676  T
Q  192 gaaatagattatatataagcacatatatgagaaacacttatcctataag 240  Q
    |||||||  |||| |||||||| ||||||| ||||| |||| |||||||    
T  32386677 gaaatagtctatacataagcacttatatgataaacatttatactataag 32386725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 2112222 - 2112152
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaat 196  Q
    |||| |||| |||||| ||||||||||||||| ||||  ||| |||||||||||||| ||| ||||||||||    
T  2112222 atagtttatgaaaacaacttatagtttatatg-aaacaatttaactttattttatctttttattatagaaat 2112152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 56 - 219
Target Start/End: Complemental strand, 7148757 - 7148596
Alignment:
Q  56 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatat 155  Q
    |||| ||| ||||||||||||||  ||||| ||||| | |||| | ||| ||| |||||||| || ||  ||||||||||||| | ||||||| ||||||    
T  7148757 agagcttacggaaacaacttatgacttgtccataagctattttcaacttattttcataagctctccagggtagcttattaaaataccttatagcttatat 7148658  T
Q  156 gaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatat 219  Q
    | |||  ||| || ||| |||||||| ||  || ||||||||| ||||| |||||||| |||||    
T  7148657 gtaaagagttgga-ttttttttatct-ttagttgtagaaatagcttatacataagcacttatat 7148596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 176
Target Start/End: Complemental strand, 10032605 - 10032542
Alignment:
Q  113 aagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 176  Q
    |||||| |||||||||||||| || ||||||||||| ||||||||||   ||||| ||||||||    
T  10032605 aagcttgctagcatagcttataaagacagcttatagcttatatgaaattagtttgcctttattt 10032542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 24836264 - 24836318
Alignment:
Q  142 cttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 197  Q
    ||||||||||||| ||||||  |||||||||||||||||| ||| |||||||||||    
T  24836264 cttatagtttatacgaaaacaatttgactttattttatct-tttgttatagaaata 24836318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 30523745 - 30523627
Alignment:
Q  61 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 160  Q
    |||||||||||||||||||  |||  ||||| |||||| | ||  |||| |||| || || || ||||||||| |||| | ||||||| ||||||||| |    
T  30523745 ttatggaaacaacttatgccatgttcataagctgttttcaactaatttctataacctctcaaggatagcttatgaaaa-aacttatagcttatatgaaga 30523647  T
Q  161 cggtttgactttattttatc 180  Q
    || |||||| ||||||||||    
T  30523646 cgatttgacattattttatc 30523627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 32976088 - 32975887
Alignment:
Q  37 acttgtgagcttgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 135  Q
    |||||||||  ||||||  |||| |||| |||||| |||||| |||| || ||||| |||||| | | || ||| |||| | ||| || ||||||||| |    
T  32976088 acttgtgagactgtttggaagagcttatagaaacagcttatgacatt-tccataagctgttttcagcgtgcttctataatcattccaggatagcttatga 32975990  T
Q  136 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcct 235  Q
    ||||| ||||| | || |||  |||| ||||||||||||||||| | ||| ||| |||||||  ||||| |||| ||| |||||||||| | ||||| ||    
T  32975989 aaacaacttattgcttctattgaaacagtttgactttattttatat-tttgttacagaaataacttatacataaacacttatatgagaagcgcttatgct 32975891  T
Q  236 ataa 239  Q
    ||||    
T  32975890 ataa 32975887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 33787774 - 33787876
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatat 205  Q
    |||||||||||| || |  ||| ||||| |||||||||||||  |||||||||| |  ||||||||| |||||| | ||| |||||||||||| |||||     
T  33787774 tttccataagctctccaagataacttatgaaaacagcttataacttatatgaaatcaatttgactttgttttatat-tttgttatagaaatagtttatac 33787872  T
Q  206 ataa 209  Q
    ||||    
T  33787873 ataa 33787876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 242
Target Start/End: Original strand, 3204593 - 3204706
Alignment:
Q  128 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaaca 227  Q
    |||||| ||||||  || ||| |||||||||||| ||| ||||||||||||||| ||| |||||||| ||| ||||   ||||||| ||||||| | | |    
T  3204593 gcttatgaaaacaatttctagcttatatgaaaacagttcgactttattttatct-tttattatagaagtagtttattcgtaagcacttatatgatataaa 3204691  T
Q  228 cttatcctataagcg 242  Q
    ||||  |||||||||    
T  3204692 cttacactataagcg 3204706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 4247077 - 4247181
Alignment:
Q  93 tgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatag 192  Q
    |||||| | ||||||| ||||||| |||||| | | ||||| |||||||||||||  |||||||||||| |    ||| |||||||||| ||| ||||||    
T  4247077 tgttttcagcttgttttcataagccttctaggacaacttatgaaaacagcttataacttatatgaaaacagaccaactctattttatct-tttgttatag 4247175  T
Q  193 aaatag 198  Q
    ||||||    
T  4247176 aaatag 4247181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 203
Target Start/End: Complemental strand, 24782096 - 24782004
Alignment:
Q  110 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 203  Q
    |||||||| || || |||| ||||||||  ||||||||  ||||||||||||  ||||| || ||||||||| ||| |||||||||||| ||||    
T  24782096 cataagctctcaaggatagtttattaaagtagcttataacttatatgaaaacaatttgatttgattttatct-tttgttatagaaatagcttat 24782004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 31624278 - 31624202
Alignment:
Q  127 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 204  Q
    ||||||||||||||||| |||| ||||| ||||||  ||| |  ||||||||||| ||| |||||||||||| |||||    
T  31624278 agcttattaaaacagctaatagattatacgaaaacaatttaaacttattttatct-tttgttatagaaatagcttata 31624202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 181
Target Start/End: Complemental strand, 33887941 - 33887796
Alignment:
Q  36 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 135  Q
    |||||||||  ||||||| |||| |||||| ||| | ||||||   |||  | |||||||||| | ||| ||||||||||| ||  || ||||||||| |    
T  33887941 cacttgtgacattgtttgagagaatttatgaaaatagcttatgacatgttcacaagttgttttcaacttatttccataagcatttcaggatagcttatga 33887842  T
Q  136 aaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||| |||| | |||||  ||||| |||||| ||| ||||||||    
T  33887841 aaacagtttattgattatactaaaacagtttgagtttgttttatct 33887796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 4246432 - 4246396
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaac 161  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  4246432 atagcttatgaaaacagcttatagattatatgaaaac 4246396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 6654655 - 6654552
Alignment:
Q  107 ttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatata 206  Q
    ||||||||||| || |  ||||| ||||||||||||||| |||||| |  |||||  |||||||| ||||||| | ||| |||||||||||  ||||| |    
T  6654655 ttccataagctctccaagatagcatattaaaacagcttaaagtttaaacaaaaacaatttgacttaattttat-tatttgttatagaaataacttataca 6654557  T
Q  207 taagc 211  Q
    |||||    
T  6654556 taagc 6654552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 25426192 - 25426136
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||| |||| ||||||||| ||| |||||| |  ||||||||||||||||||    
T  25426192 atagcttataaaaatagcttatagcttacatgaaagcaatttgactttattttatct 25426136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 28660788 - 28660864
Alignment:
Q  105 gtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||||||||  || |||| |||| ||||||  ||||| ||||||||||||   ||| ||||||||||||||    
T  28660788 gtttccataagcttttaaggatagtttatgaaaacaatttataatttatatgaaaataatttaactttattttatct 28660864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 32917310 - 32917266
Alignment:
Q  34 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatg 78  Q
    ||||||||||||  |||||| ||||| ||||||||||||||||||    
T  32917310 aacacttgtgagactgtttgggagagcttatggaaacaacttatg 32917266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 28586777 - 28586909
Alignment:
Q  88 taagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttt 187  Q
    |||| |||||| | ||| |||| ||||||| ||||| ||||||  | ||||||||||||| ||||||||||||| ||||||||||||||||||| ||| |    
T  28586777 taagctgttttcagcttatttcgataagctctctaggatagctcgtcaaaacagcttataatttatatgaaaacagtttgactttattttatct-tttgt 28586875  T
Q  188 tatagaaatagattatatataagcacatatatga 221  Q
    |||||||||||  |||| |||| |||||||||||    
T  28586876 tatagaaatagtgtatacataaccacatatatga 28586909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 212
Target Start/End: Complemental strand, 16889826 - 16889671
Alignment:
Q  56 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatat 155  Q
    |||| ||||| ||||| ||||| |  |||| |||||||||||| |  || ||||||||| || ||||||||||||||| |||||||||||||| || |||    
T  16889826 agagattatgaaaacagcttatactatgtctataagttgttttcagattatttccataaactctctagcatagcttatgaaaacagcttatagcttctat 16889727  T
Q  156 gaaaacggtttgactttattttatctcttttttatagaaatagattatatataagca 212  Q
     ||||| ||||||||| | ||||||| ||| |||| ||||||| ||||| |||||||    
T  16889726 aaaaacagtttgacttaagtttatct-tttgttatggaaatagcttatacataagca 16889671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 241
Target Start/End: Original strand, 20982207 - 20982298
Alignment:
Q  149 tttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataagc 241  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||||||| ||||| |||||||| ||||||| || ||||||| ||||||||    
T  20982207 tttatatgaaaacgggttgactttattttatc-ctttgttatagaaatagcttatacataagcacttatatgataagcacttatgctataagc 20982298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 198
Target Start/End: Complemental strand, 14295598 - 14295456
Alignment:
Q  55 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 154  Q
    ||||| ||||| ||||| ||||||   |||| ||||| |||||| | |||  ||| | ||||| || || ||||||||  |||||||||||||| |||||    
T  14295598 gagagcttatgaaaacagcttatgatatgtcgataagctgttttcagcttacttctaaaagctctccaggatagcttacgaaaacagcttatagcttata 14295499  T
Q  155 tgaaaacggtttgactttattttatctcttttttatagaaatag 198  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||||    
T  14295498 tgaaaacagtttgactttattttatct-tttgttatagaaatag 14295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 39 - 197
Target Start/End: Original strand, 37588322 - 37588479
Alignment:
Q  39 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa 138  Q
    |||||||  |||||| ||||| ||||| | ||||| |||| | ||| |||||| |||||| | ||| |||||||||||| || || ||| ||||| ||||    
T  37588322 ttgtgagactgtttgagagagcttatgaatacaacctatgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaa 37588421  T
Q  139 cagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 197  Q
    || ||||||| ||||||||||||  ||||| || ||||||||| ||| |||||||||||    
T  37588422 caacttatagcttatatgaaaactttttgatttgattttatct-tttattatagaaata 37588479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 80 - 213
Target Start/End: Complemental strand, 12975413 - 12975282
Alignment:
Q  80 attgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 179  Q
    |||||| |||||||||||| | ||| || ||||||||| || |  ||||||||| || ||||||||||| ||||||||||||  ||||| ||||||||||    
T  12975413 attgtccataagttgttttcaacttatt-ccataagctctccaagatagcttatgaacacagcttatagcttatatgaaaacaatttgattttattttat 12975315  T
Q  180 ctcttttttatagaaatagattatatataagcac 213  Q
     ||||| |||||| ||||| || |||||||||||    
T  12975314 -tctttgttataggaatagtttgtatataagcac 12975282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 39128659 - 39128545
Alignment:
Q  127 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaac 226  Q
    ||||||| |||| || ||||||||||| ||| |||  |||||||||||||||||| ||| |||||||| ||| ||||| |||||||||||||| | |||     
T  39128659 agcttataaaaatagtttatagtttatttgagaacaatttgactttattttatct-tttgttatagaattagcttatacataagcacatatattaaaaaa 39128561  T
Q  227 acttatcctataagcg 242  Q
     ||||| |||||||||    
T  39128560 gcttatgctataagcg 39128545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 18875421 - 18875331
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttt 177  Q
    |||||||||||| | |||||||||||||||| || || ||| |||||||||||||||||||  || ||||||| |  ||||||||||||||    
T  18875421 ataagttgttttcaacttgtttccataagctctccaggatatcttattaaaacagcttataacttgtatgaaatcaatttgactttatttt 18875331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 9202800 - 9202912
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatat-atgagaaaca 227  Q
    ||||| |||||||||||| | ||||||||||||  ||| |||||||||||||| |||  || |||||||| |||||||||||||| ||| |||| |||||    
T  9202800 cttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatct-tttgctacagaaatagcttatatataagcacttatcatgataaaca 9202898  T
Q  228 cttatcctataagc 241  Q
    ||| | ||||||||    
T  9202899 cttgtgctataagc 9202912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 50 - 203
Target Start/End: Complemental strand, 35960510 - 35960359
Alignment:
Q  50 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 149  Q
    |||| ||||| |||||||| ||||||| |   |||| ||||| |||||| | ||| ||||  || |||||| || ||||||||| ||| || ||||||||    
T  35960510 tttgagagagcttatggaagcaacttacgacatgtccataagatgtttttagcttatttctttacgctttccaggatagcttatgaaatcaacttatagt 35960411  T
Q  150 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 203  Q
    ||||||| |||  ||||||||||||||||||| ||| |||||||||||| ||||    
T  35960410 ttatatg-aaatagtttgactttattttatct-tttattatagaaatagtttat 35960359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 211
Target Start/End: Complemental strand, 12425639 - 12425508
Alignment:
Q  79 cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttta 178  Q
    |||||||||||||||||||| | ||| ||| |||||| | || |  ||||||| | |||||||||||||| ||||| ||||||  ||| |||||||||||    
T  12425639 cattgtcaataagttgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttatttta 12425540  T
Q  179 tctcttttttatagaaatagattatatataagc 211  Q
    ||| |||  |||| |||||| ||||| ||||||    
T  12425539 tct-tttactatataaatagtttatacataagc 12425508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 32059642 - 32059693
Alignment:
Q  130 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  32059642 ttatgaaaacagcttatagcttatatgaaaacagtttgactttattttatct 32059693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 211
Target Start/End: Complemental strand, 32172764 - 32172590
Alignment:
Q  36 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 135  Q
    |||||||||| | ||||| ||||| ||||||||||||||||||   |||| |||||   |||| | ||| ||||||| || | |  |  ||||||||| |    
T  32172764 cacttgtgagatagtttgggagagcttatggaaacaacttatgacatgtccataagccattttcagcttatttccattagttcttcatgatagcttatga 32172665  T
Q  136 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 211  Q
    ||||||||||||| ||||||| ||||   ||||||| ||||||||| ||| || ||||||||| ||||| ||||||    
T  32172664 aaacagcttatagcttatatgtaaacaacttgacttcattttatct-tttgttgtagaaatagtttatacataagc 32172590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 240
Target Start/End: Original strand, 37063147 - 37063236
Alignment:
Q  150 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataag 240  Q
    |||||||||||  ||||||||||||||||||| ||| |||||||||||| ||||| |||||||  ||||||| || || |||| |||||||    
T  37063147 ttatatgaaaatagtttgactttattttatct-tttgttatagaaatagtttatacataagcatttatatgacaagcatttatgctataag 37063236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 197
Target Start/End: Original strand, 37526161 - 37526318
Alignment:
Q  39 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa 138  Q
    |||||||  |||||| ||||| ||||| | ||||| ||||   ||| |||||| |||||| | ||| |||||||||||| || || | | ||||| ||||    
T  37526161 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaa 37526260  T
Q  139 cagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 197  Q
    || ||||||| ||||||||||||  ||||| || ||||||||| ||| |||||||||||    
T  37526261 caacttatagcttatatgaaaactttttgatttgattttatct-tttattatagaaata 37526318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 38047886 - 38047959
Alignment:
Q  108 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||| || || ||||||||| |||||||| |||||| ||||||||||   ||||||||||||||||||    
T  38047886 tccataagctctccaggatagcttatgaaaacagcatatagtatatatgaaaataatttgactttattttatct 38047959  T

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Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 39257438 - 39257521
Alignment:
Q  128 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    |||||| |||||| ||||||||||||||||||| ||||||||||||||||| || ||| ||||||| ||||  |||| ||||||||    
T  39257438 gcttatgaaaacaacttatagtttatatgaaaa-ggtttgactttattttacct-tttgttatagagatagcatatacataagcac 39257521  T

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Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 7096203 - 7096262
Alignment:
Q  153 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    |||||||| |||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  7096203 tatgaaaatggtttgactttattttatct-tttgttatagaaatagcttatacataagcac 7096262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 19177491 - 19177396
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactta 231  Q
    |||||| ||||||| |||||||||||| ||| ||||| ||||||||| | | || ||||||||| ||||| |||||||| ||||||| || ||||||    
T  19177491 aaaacaacttatagcttatatgaaaacagttagacttaattttatct-tctgttgtagaaatagtttatacataagcacttatatgataatcactta 19177396  T

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Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 30217192 - 30217045
Alignment:
Q  36 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 135  Q
    ||||||||||  |||||  ||||| ||||||||  | ||||||||| ||| |||||||||||||   || |||||||||||| || || ||||||||| |    
T  30217192 cacttgtgagactgtttaggagagcttatggaattatcttatgcat-gtccataagttgttttaggtttatttccataagctctccaggatagcttatga 30217094  T
Q  136 aaacagcttatagtttatatgaaaacggtttgactttattttatctctt 184  Q
    || |||||||||| |||  |||||    || ||||||||||||||||||    
T  30217093 aagcagcttatagattacgtgaaattaattagactttattttatctctt 30217045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 147
Target Start/End: Original strand, 1437611 - 1437697
Alignment:
Q  61 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat-taaaacagcttata 147  Q
    ||||||||||||||||| ||| ||| |||||| ||||| ||||||||||||| ||||||| |  |||||||||  |||||||||||||    
T  1437611 ttatggaaacaacttatacat-gtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaaacagcttata 1437697  T

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Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 35135727 - 35135821
Alignment:
Q  142 cttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctat 237  Q
    ||||||| |||||||||||  ||||||||||||||||||| ||| |||||||||||  ||||| |||| ||| ||||||  || ||||||| ||||    
T  35135727 cttatagcttatatgaaaatagtttgactttattttatct-tttgttatagaaatatcttatacataaacacttatatgttaagcacttatgctat 35135821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 14980517 - 14980471
Alignment:
Q  133 ttaaaacagcttatagtttatatgaaaacggtttgactttattttat 179  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||    
T  14980517 ttaaaacaggttatagtttagatgaaaacagtttgactttattttat 14980471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 26209461 - 26209566
Alignment:
Q  125 atagcttattaaaacagcttatagtttata-tgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgaga 223  Q
    ||||||||| |||||||||||||| ||||| |||||||  || ||||||||||||||   || |||||||||||  ||||| ||||||| |||| ||| |    
T  26209461 atagcttatgaaaacagcttatagcttatattgaaaacaattggactttattttatc---ttgttatagaaataacttatacataagcaaatatgtgata 26209557  T
Q  224 aacacttat 232  Q
    | |||||||    
T  26209558 agcacttat 26209566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 12595789 - 12595857
Alignment:
Q  126 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaa 195  Q
    |||||||| ||| ||||| |||||||||||||||||  ||| |||||||||||||| ||| |||||||||    
T  12595789 tagcttatgaaaccagctcatagtttatatgaaaacaatttaactttattttatct-tttgttatagaaa 12595857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 35095870 - 35095926
Alignment:
Q  164 tttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    |||||||||||||||||| ||| |||||||||||| ||| |||||||||| |||||||    
T  35095870 tttgactttattttatct-tttgttatagaaatagtttaaatataagcacttatatga 35095926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 36542260 - 36542373
Alignment:
Q  55 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 154  Q
    |||| |||||||||||| ||||||   |||| | ||| |||||| | ||| |||||| ||||| ||||| |||||||||  || |||||||||| |||||    
T  36542260 gagattttatggaaacatcttatgacatgtccagaagctgtttttaacttatttccacaagctctctaggatagcttatggaatcagcttatagcttata 36542359  T
Q  155 tgaaaacggtttga 168  Q
    ||| ||| ||||||    
T  36542360 tgagaacagtttga 36542373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 38829698 - 38829770
Alignment:
Q  140 agcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    |||||||||||||| |||||||  | |||||| ||||||||| ||| ||||| |||||| ||||||||||||||    
T  38829698 agcttatagtttatttgaaaaccatatgacttaattttatct-tttattataaaaataggttatatataagcac 38829770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 41957430 - 41957535
Alignment:
Q  56 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatat 155  Q
    |||| ||| ||||||| ||||||   |||| |||||||||||| ||||| ||| |||||| | || || ||||||||| |||||||||||||  ||| ||    
T  41957430 agagcttacggaaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttataacttacat 41957529  T
Q  156 gaaaac 161  Q
    ||||||    
T  41957530 gaaaac 41957535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 36539764 - 36539712
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||| |||||| ||||||| |||||||||||| | |||||||||||||||||    
T  36539764 cttataaaaacaacttatagcttatatgaaaacaggttgactttattttatct 36539712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 41277398 - 41277454
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||| |||||| ||| ||  |||||||||||| |||||||||||||||||||    
T  41277398 atagcttatgaaaacaacttttaacttatatgaaaacagtttgactttattttatct 41277454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 583838 - 583877
Alignment:
Q  142 cttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  583838 cttatagcttatatgaaaacagtttgactttattttatct 583877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 203
Target Start/End: Original strand, 3970687 - 3970806
Alignment:
Q  84 tcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctct 183  Q
    |||||||| | |||| | ||| ||| |||||||| || || ||||||||| |||  ||||| ||| ||||| |||| | | ||||||||||||||||| |    
T  3970687 tcaataagctattttcagcttattttcataagctctccagtatagcttatgaaattagcttctagattataagaaagcagattgactttattttatcttt 3970786  T
Q  184 tttttatagaaatagattat 203  Q
     | |||||||||||| ||||    
T  3970787 gtgttatagaaatagtttat 3970806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 180
Target Start/End: Complemental strand, 6109596 - 6109452
Alignment:
Q  34 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 133  Q
    ||||||||||||  | |||  ||||| ||||||||| || |||||   |||| |||||||||||| | ||| |||||| ||||| || | ||||||| ||    
T  6109596 aacacttgtgagaatattttggagagcttatggaaaaaaattatgatatgtccataagttgttttcagcttatttccaaaagctctcgaacatagctaat 6109497  T
Q  134 taaaacagcttatagtttatatgaaaacggtttgactttattttatc 180  Q
     | || ||||||||| | ||||||||||  | |||||||||||||||    
T  6109496 gagaatagcttatagctaatatgaaaac--tgtgactttattttatc 6109452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 8177581 - 8177620
Alignment:
Q  121 tagcatagcttattaaaacagcttatagtttatatgaaaa 160  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  8177581 tagcatagcttatgaaaacagtttatagtttatatgaaaa 8177620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 15003543 - 15003618
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||||| ||| | ||||||||| |||||  ||||||| ||||||||| |  |||||| ||||||||||||    
T  15003543 tttccataagctctcttggatagcttatgaaaaccacttatagcttatatgaagagagtttgattttattttatct 15003618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 18704041 - 18704178
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||| |||||||||||| | ||| |||||||||| | | |   ||||||||| |||||| ||||||| |||||| ||||  | ||||||||| |||||||    
T  18704041 tgtctataagttgttttcagcttatttccataagatctttgtaatagcttatgaaaacaacttatagcttatataaaaatagcttgacttta-tttatct 18704139  T
Q  182 cttttttatagaaatagattatatataagcacatatatga 221  Q
     ||| |||||||||||  ||||| ||||| || |||||||    
T  18704140 -tttgttatagaaataacttatacataagaacttatatga 18704178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 197
Target Start/End: Original strand, 37690598 - 37690756
Alignment:
Q  39 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagctt-attaaa 137  Q
    |||||||  |||||| ||||| ||||| | ||||| ||||   ||| |||||| |||||| | ||| |||||||||||| || |  ||| ||| || |||    
T  37690598 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccataataactttatgaaa 37690697  T
Q  138 acagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 197  Q
    ||| ||||||| ||||||||||||  ||||| || ||||||||| ||| |||||||||||    
T  37690698 acaacttatagcttatatgaaaactttttgatttgattttatct-tttattatagaaata 37690756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 38831486 - 38831587
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatat 205  Q
    ||||||| |||| ||||  ||||||||  |||||| |||||  |||||| |||||| ||||||||||||||||||| ||| | | |||||||| ||||||    
T  38831486 tttccatcagctatctatgatagcttaa-aaaacaacttatcatttatacgaaaacagtttgactttattttatct-tttataacagaaatagcttatat 38831583  T
Q  206 ataa 209  Q
    ||||    
T  38831584 ataa 38831587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 19113146 - 19113271
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatat 205  Q
    ||||||| | || ||||| ||| || ||| ||||| ||||||||||||| |||||   || ||| ||||||||| | ||| ||||| |||||| |||||     
T  19113146 tttccattacctctctagaataactcattgaaacaacttatagtttataagaaaaaaattcgacattattttat-tttttgttataaaaatagtttatac 19113244  T
Q  206 ataagcacatatatgagaaacacttat 232  Q
    |||||||  ||||||| ||||||||||    
T  19113245 ataagcaattatatgataaacacttat 19113271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 19369330 - 19369276
Alignment:
Q  130 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctt 184  Q
    |||| ||| ||||||||||||||||||||||| ||| ||  ||||||||||||||    
T  19369330 ttatgaaaccagcttatagtttatatgaaaacagttcgagcttattttatctctt 19369276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 26390760 - 26390893
Alignment:
Q  48 tgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttat 146  Q
    |||||| ||||| | || ||||||||||||  ||| ||| ||||| |||||| | ||| |||||||||||| || || ||| ||||  ||| || |||||    
T  26390760 tgtttgagagagctgatagaaacaacttatctcatagtccataagctgttttcaccttatttccataagctctccaggataacttaggaaaccatcttat 26390859  T
Q  147 agtttatatgaaaacggtttgactttattttatct 181  Q
    || |||||||||||| |||| || |||||||||||    
T  26390860 agcttatatgaaaacagtttaac-ttattttatct 26390893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 15074754 - 15074883
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||| ||||| |||||| | ||| ||||||||||||||| || ||| ||||| |||||| ||||||| |   |||||||| |||||| | |||| |||||    
T  15074754 tgtccataagctgttttcagcttatttccataagctttccagtataacttatgaaaacaacttatagct--catgaaaacagtttgattatattctatct 15074851  T
Q  182 cttttttatagaaatagatt-atatataagcac 213  Q
     ||| |||||||||||  || ||||||||||||    
T  15074852 -tttattatagaaataacttcatatataagcac 15074883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 18700475 - 18700399
Alignment:
Q  56 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 133  Q
    |||| ||||||||||||||||||   |||| |||||||||||| | ||| | ||||||||||||| || |||||||||    
T  18700475 agagcttatggaaacaacttatgacatgtctataagttgttttcagctt-tatccataagctttcaaggatagcttat 18700399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 18857450 - 18857503
Alignment:
Q  127 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc 180  Q
    ||||||| |||||||||||||| |||||  |||||  |||||||||||||||||    
T  18857450 agcttatgaaaacagcttatagattatagaaaaacaatttgactttattttatc 18857503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 37198111 - 37198184
Alignment:
Q  108 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||| |||||||||||| || ||||||  |||||  ||| |||||| | |||||| ||||||||||||    
T  37198111 tccataagctatctagcatagctaatgaaaacaatttataacttaaatgaaatcagtttgattttattttatct 37198184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 161
Target Start/End: Original strand, 2569679 - 2569779
Alignment:
Q  61 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 160  Q
    ||||||||| | ||||||   |||| ||||| ||||||||  || | | |||||||||| ||  |||| |||| |||||||||||||| |||||||||||    
T  2569679 ttatggaaatagcttatgacatgtccataagctgttttaagtttatattcataagctttttatgatagtttatgaaaacagcttatagattatatgaaaa 2569778  T
Q  161 c 161  Q
    |    
T  2569779 c 2569779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 8481236 - 8481157
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 209  Q
    ||||| ||||||||||||||| ||||| |||   |||| |||||||||||||| ||| ||||| ||||| |||||| ||||    
T  8481236 cttatgaaaacagcttatagtgtatataaaatttgtttaactttattttatct-tttattatataaataaattatacataa 8481157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 10272415 - 10272535
Alignment:
Q  61 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 160  Q
    |||| |||||||||||||   ||||  ||||||||||| | ||| ||| ||||| || || |  || |||||| |||||| ||||||| ||||| |||||    
T  10272415 ttatagaaacaacttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaa 10272514  T
Q  161 cggtttgactttattttatct 181  Q
    |  |||||||| |||||||||    
T  10272515 caatttgacttaattttatct 10272535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 12595503 - 12595586
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    ||||| ||| ||||||||| |||||| ||||||  ||||| |||||||||||| |||  ||||||||||| ||||| | ||||||    
T  12595503 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatct-tttgctatagaaatagcttatacacaagcac 12595586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 14599353 - 14599425
Alignment:
Q  127 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt-ttatagaaatag 198  Q
    |||||||  ||||| ||||||  |||||||||||| ||||||||| ||||||||  |||| ||||||||||||    
T  14599353 agcttatcgaaacaacttataacttatatgaaaacagtttgacttaattttatcagttttgttatagaaatag 14599425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 26516422 - 26516366
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||| ||||||| |||||  ||||||||||   |||||||||||||||||||    
T  26516422 atagcttatgaaaacagtttataacttatatgaaagtagtttgactttattttatct 26516366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 29116998 - 29117049
Alignment:
Q  145 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 197  Q
    |||| ||||| |||||| ||||||||||||||||||| ||| |||||||||||    
T  29116998 atagcttatacgaaaacagtttgactttattttatct-tttgttatagaaata 29117049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 31694528 - 31694445
Alignment:
Q  137 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    |||| |||||||||| ||| ||||| ||||||||||| ||||| | ||| ||||||| |||| ||||  |||||||| |||||||    
T  31694528 aacaacttatagtttgtataaaaacagtttgactttagtttatgt-tttgttatagacatagcttattcataagcacttatatga 31694445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 35550970 - 35550915
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||| |||| ||||||||||||||||||||||||||    |||||||||||||||||    
T  35550970 ataggttataaaaacagcttatagtttatatgaaaa-taattgactttattttatct 35550915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 41017745 - 41017697
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttatttt 177  Q
    ||||| |||||| ||||||| ||||| ||||| ||||||||||||||||    
T  41017745 cttatgaaaacaacttatagcttataggaaaatggtttgactttatttt 41017697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 6e-22; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 61 - 242
Target Start/End: Complemental strand, 4558884 - 4558704
Alignment:
Q  61 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 160  Q
    ||||||||| ||||||||   |||| |||||||||||| |  || |||||||||||| ||||| |||||||||  |||||||||||||  ||||||||||    
T  4558884 ttatggaaataacttatgatgtgtctataagttgtttttagtttatttccataagctctctaggatagcttatggaaacagcttatagcatatatgaaaa 4558785  T
Q  161 cggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataagcg 242  Q
       ||| |||||||||||||| ||| |||||||||||| ||||| |||| ||| || || | ||||  |||| |||||||||    
T  4558784 taatttaactttattttatct-tttattatagaaatagcttatacataaacacttacataataaacgtttatgctataagcg 4558704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 82 - 239
Target Start/End: Original strand, 28769344 - 28769500
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||| |||||||||||| | ||| ||||||||| || || |  ||||||||| |||||||||||||| ||||| |||||  ||||||||| |||||||      
T  28769344 tgtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttataagaaaatagtttgacttaattttat-a 28769442  T
Q  182 cttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataa 239  Q
     ||| |||||| ||||| ||||| |||||||  ||||||| || ||||||| ||||||    
T  28769443 gtttgttataggaatagcttatacataagcatttatatgataagcacttatgctataa 28769500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 210
Target Start/End: Complemental strand, 12361257 - 12361130
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||| ||||| |||||| | ||| ||||||| |||| ||  | ||| ||||| |||||||||||||| ||||||||||||  |||||||| |||||||||    
T  12361257 tgtccataagctgttttcaacttatttccattagctctcctgaataacttatgaaaacagcttatagcttatatgaaaacaatttgacttcattttatct 12361158  T
Q  182 cttttttatagaaatagattatatataag 210  Q
     || ||||||||||||  |||||||||||    
T  12361157 -ttatttatagaaataacttatatataag 12361130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 27728063 - 27728141
Alignment:
Q  119 tctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 198  Q
    ||||| ||||||||| |||||| || ||| ||||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  27728063 tctaggatagcttatgaaaacaactaatactttatatgaaaatagtttgactttattttatct-ttttttatagaaatag 27728141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 33209268 - 33209350
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatata 208  Q
    ||||||||| |||| |||||||||||||||||||||| ||| ||||||||||||||| ||  |||||||||||| |||| ||||    
T  33209268 atagcttataaaaatagcttatagtttatatgaaaacagttcgactttattttatct-ttcattatagaaatagcttatttata 33209350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 35298525 - 35298621
Alignment:
Q  125 atagcttattaaaacagcttatagtttata-tgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||||| |||||| ||||||||||||| ||||||| ||||| ||||||||||||| ||| |||  ||||||| ||||| |||||||| |||||||    
T  35298525 atagcttatgaaaacaacttatagtttatattgaaaactgtttggctttattttatct-tttgttactgaaatagcttatacataagcacttatatga 35298621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 39551180 - 39551359
Alignment:
Q  48 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 147  Q
    |||||| |||| |||||||||||||||||||   |||| | ||| |||||| | ||| |||  ||||||| || || | ||||||| |||||| ||||||    
T  39551180 tgtttgggagaatttatggaaacaacttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagcttatgaaaacaacttata 39551279  T
Q  148 gtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacac 228  Q
    | || |||||| || ||||  ||||||||||||| ||| |||| ||| ||| ||||| |||| ||| ||||||| ||||||    
T  39551280 gcttgtatgaagacagtttagctttattttatct-tttattatggaagtaggttatacataaacacttatatgataaacac 39551359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 213
Target Start/End: Complemental strand, 29973122 - 29973016
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatat 205  Q
    ||||||||| || || || ||||||||| |||||| ||||||| |||| ||||||  |||||||||||||||| || | | ||| |||||||| ||||||    
T  29973122 tttccataaactctcaaggatagcttatgaaaacaacttatagcttatgtgaaaatagtttgactttattttacct-tgtgttaaagaaatagcttatat 29973024  T
Q  206 ataagcac 213  Q
    ||||||||    
T  29973023 ataagcac 29973016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 35534931 - 35535004
Alignment:
Q  147 agtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||||  ||||| |||||||||||||||| || ||| |||||||||||| |||||||||||||| |||||||    
T  35534931 agtttatacaaaaacagtttgactttattttaact-tttattatagaaatagcttatatataagcacttatatga 35535004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 4763957 - 4763884
Alignment:
Q  108 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||| |  || ||||||||  |||||||||||||| |||| |||||||||||||| ||||||||||||    
T  4763957 tccataagctcttcaggatagcttagaaaaacagcttatagcttatgtgaaaacggtttgaatttattttatct 4763884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 239
Target Start/End: Complemental strand, 10727233 - 10727106
Alignment:
Q  110 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 209  Q
    |||||||||| ||| ||||||||| |||||| ||||||  |||| |||||||  ||||| ||||||| |||| |||  ||||||||||| ||||  ||||    
T  10727233 cataagctttttagaatagcttat-aaaacaacttataacttatgtgaaaacactttgaatttatttcatct-tttgctatagaaatagcttatgcataa 10727136  T
Q  210 gcacatatatgagaaacacttatcctataa 239  Q
    |||| |||||||  ||||||||| ||||||    
T  10727135 gcacttatatgatgaacacttatgctataa 10727106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 180
Target Start/End: Original strand, 30191112 - 30191244
Alignment:
Q  48 tgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttat 146  Q
    |||||| ||||| |||||||||||||||||| |||  |||| || ||||||| | ||| ||||||||| | ||  || ||||||||| |||| |||||||    
T  30191112 tgtttgggagagcttatggaaacaacttatgacatgttcaa-aacttgttttcagcttatttccataaacatttcaggatagcttatcaaaatagcttat 30191210  T
Q  147 agtttatatgaaaacggtttgactttattttatc 180  Q
    || |||||||  | | ||||||||||||||||||    
T  30191211 agattatatgtgagcagtttgactttattttatc 30191244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 204
Target Start/End: Original strand, 1470867 - 1470982
Alignment:
Q  88 taagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttt 187  Q
    ||||||||||| ||||| ||| | ||| ||||  |  |||| |||| |||||||||||||| ||||||||||    |||||||||||||||||| ||| |    
T  1470867 taagttgttttcatcttattttcctaaacttttcatgataggttatgaaaacagcttatagcttatatgaaagtaatttgactttattttatct-tttat 1470965  T
Q  188 tatagaaatagattata 204  Q
    ||||||||||| |||||    
T  1470966 tatagaaatagcttata 1470982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 8799427 - 8799332
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||||| |||||| |||||| ||||| || |||  ||||||||||||||||||| ||| |||||||||||   || ||| ||||||||||||||    
T  8799427 atagcttataaaaacaccttataatttatctggaaatagtttgactttattttatct-tttgttatagaaataacatacatacaagcacatatatga 8799332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 14482185 - 14482110
Alignment:
Q  164 tttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataag 240  Q
    |||||||||||||||||| ||| |||||||||||| ||||| |||||||| ||||||| || |||| || |||||||    
T  14482185 tttgactttattttatct-tttgttatagaaatagtttatacataagcacttatatgataagcactaatgctataag 14482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 6509332 - 6509407
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||| ||||||| || || ||||||||| |||||||||||||| |||||| || ||  ||||||||||||||||||    
T  6509332 tttcaataagctctccaggatagcttatgaaaacagcttatagcttatataaatacaatttgactttattttatct 6509407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 181
Target Start/End: Complemental strand, 6950435 - 6950288
Alignment:
Q  34 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 133  Q
    |||| ||||||| ||||||| ||||| ||||| ||||||| ||||   |||| |||||||||||| | ||| |||||||||||| | ||| ||| ||| |    
T  6950435 aacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataagttgttttcagcttatttccataagctctttaggataactttt 6950336  T
Q  134 --taaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
      ||||  ||||||||  |||||||||||| ||||| ||||| |||||||    
T  6950335 tataaattagcttata--ttatatgaaaacagtttgtctttactttatct 6950288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 11183625 - 11183495
Alignment:
Q  67 aaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggttt 166  Q
    ||||||||||||   |||| ||||| |||||| | ||| |||||||||||| || ||  |||||| | |||||||||||||| | ||||||  || ||||    
T  11183625 aaacaacttatgatatgtctataagctgttttcagcttatttccataagctctccagggtagcttgtgaaaacagcttatagctaatatgaggacagttt 11183526  T
Q  167 gactttattttatctcttttttatagaaatag 198  Q
    |||||| |||||||| || ||| |||||||||    
T  11183525 gactttgttttatctgttgttt-tagaaatag 11183495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 239
Target Start/End: Original strand, 3645884 - 3645977
Alignment:
Q  145 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataa 239  Q
    |||| |||||||||||  |||||| ||| |||||| | ||| |||||||||||| ||||| | |||||| ||||||| |||||||||| ||||||    
T  3645884 atagcttatatgaaaatagtttgattttgttttatat-tttcttatagaaatagcttatacacaagcacttatatgataaacacttatgctataa 3645977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 10076335 - 10076410
Alignment:
Q  136 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    |||||||||||| |||||||||||||  ||||||||  || ||| | ||| |||||||||||||||||| ||||||||    
T  10076335 aaacagcttataatttatatgaaaacaatttgactt--ttatatttttttattatagaaatagattatacataagcac 10076410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 34770920 - 34770858
Alignment:
Q  119 tctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||| ||||||||| |||||| ||||||| ||| ||||||||  ||||||||||||||||||    
T  34770920 tctaggatagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatct 34770858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 43704392 - 43704473
Alignment:
Q  93 tgttttaatcttgtttccataagctttctagcata--gcttattaaaacagcttatagtttatatgaaaacggtttgacttt 172  Q
    |||||||| ||| ||||||||||||||  || |||   ||||| |||||| |||||||||||||||||||| ||||||||||    
T  43704392 tgttttaagcttatttccataagcttttgaggataactcttatgaaaacaacttatagtttatatgaaaacagtttgacttt 43704473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 34563244 - 34563156
Alignment:
Q  153 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataagcg 242  Q
    ||||||||  |||||||||||||||||| |||| | |||||||||  |||||||||||||| ||||||| |||   |||| |||||||||    
T  34563244 tatgaaaattgtttgactttattttatc-ctttgtcatagaaataacttatatataagcacttatatgataaatgtttatgctataagcg 34563156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 242
Target Start/End: Complemental strand, 35869859 - 35869743
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaa 224  Q
    ||||||||| |||||| ||||||| |||||||||||  |||||| |||||||||| | ||| || ||||||| | ||||| ||||| || ||||||| ||    
T  35869859 atagcttatgaaaacaacttatagcttatatgaaaattgtttgaatttattttatat-tttgttgtagaaatcgcttatacataagaacttatatgataa 35869761  T
Q  225 acacttatcctataagcg 242  Q
       ||||| |||||||||    
T  35869760 gtgcttatgctataagcg 35869743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 3936870 - 3936787
Alignment:
Q  126 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 210  Q
    |||||||  |||||||||||||| ||||| ||| ||  |||  |||||||||||| |||| |||||||||||||||||| |||||    
T  3936870 tagcttacgaaaacagcttatagcttataggaagacaatttagctttattttatc-ctttgttatagaaatagattatacataag 3936787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 10079080 - 10079140
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 147  Q
    |||||||||||||| ||| ||||||||| ||||| || |||||| || |||||||||||||    
T  10079080 ataagttgttttaagcttctttccataaactttccagaatagctcatgaaaacagcttata 10079140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 231
Target Start/End: Complemental strand, 13652327 - 13652132
Alignment:
Q  36 cacttgtgagcttgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatt 134  Q
    |||||||||| |||||||  |||| ||||||| |||| ||||  || || | ||||| ||||||   ||| ||||| |||||| || || |||||||||     
T  13652327 cacttgtgaggttgtttggaagagcttatggacacaaattataacaatgactataagctgttttctacttatttccttaagctctccagaatagcttata 13652228  T
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactta 231  Q
    ||||||  |||||  ||||||||||||  ||| |||| |||  |||| |||  ||||||||||| ||||| |||||||| || |||| |||||||||    
T  13652227 aaaacaatttataacttatatgaaaacaatttcacttcattccatct-tttgctatagaaatagcttatacataagcacttagatgataaacactta 13652132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 231
Target Start/End: Complemental strand, 13710970 - 13710775
Alignment:
Q  36 cacttgtgagcttgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatt 134  Q
    |||||||||| |||||||  |||| ||||||| |||| ||||  || || | ||||| ||||||   ||| ||||| |||||| || || |||||||||     
T  13710970 cacttgtgaggttgtttggaagagcttatggacacaaattataacaatgactataagctgttttctacttatttccttaagctctccagaatagcttata 13710871  T
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactta 231  Q
    ||||||  |||||  ||||||||||||  ||| |||| |||  |||| |||  ||||||||||| ||||| |||||||| || |||| |||||||||    
T  13710870 aaaacaatttataacttatatgaaaacaatttcacttcattccatct-tttgctatagaaatagcttatacataagcacttagatgataaacactta 13710775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 30277255 - 30277315
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 147  Q
    |||||||||||| | ||| ||||||||| || ||||| ||||||||| |||||||||||||    
T  30277255 ataagttgttttcagcttatttccataaactctctaggatagcttatgaaaacagcttata 30277315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 39392747 - 39392822
Alignment:
Q  163 gtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataa 239  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| |||  ||| ||||||| || ||||||| ||||||    
T  39392747 gtttgactttattttatct-tttgttatagaaatagtttatacatagccacttatatgataagcacttatgctataa 39392822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 231
Target Start/End: Original strand, 41620245 - 41620444
Alignment:
Q  31 atgaacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagct 130  Q
    |||||||| ||||||  |||| | || ||||||||||||||| |||||   |||| ||||||||||||   ||| ||| || |||||    |  ||||||    
T  41620245 atgaacacctgtgaggctgttagggaaagtttatggaaacaaattatgacatgtccataagttgttttccgcttattttcaaaagctcgacaagatagct 41620344  T
Q  131 tattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactt 230  Q
    ||| |||||||||| |||  |||||||| |   |||||||||||||||||| ||| ||| | |||||  |||||||||||||| | ||||| || |||||    
T  41620345 tataaaaacagcttttagaatatatgaacataatttgactttattttatct-tttgttacaaaaataacttatatataagcacttgtatgataaccactt 41620443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 44865587 - 44865647
Alignment:
Q  100 atcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 160  Q
    ||||| ||||||||| || ||||| ||||||||| ||| |||||||||| |||||||||||    
T  44865587 atcttatttccataaactctctagtatagcttataaaaccagcttatagcttatatgaaaa 44865647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 8060768 - 8060669
Alignment:
Q  48 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 147  Q
    |||||| ||||| ||||| |||||| ||||| |  ||  ||||||| |||| | ||| |||||||||||| ||||| || |||||| |||||||||||||    
T  8060768 tgtttgagagagcttatgaaaacaaattatggaaagttcataagttattttcagcttatttccataagctctctaggattgcttatgaaaacagcttata 8060669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 209
Target Start/End: Complemental strand, 9700066 - 9699940
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||| ||||| |||||| | ||| ||| |||||||| ||| | ||| | ||| ||||||||||||| ||||| |||||||  |||||| |||||||| ||    
T  9700066 tgtccataagctgttttcaccttattttcataagctctcttgaataacatatgaaaacagcttataatttatttgaaaacaatttgaccttattttaact 9699967  T
Q  182 cttttttatagaaatagattatatataa 209  Q
     ||| |||| ||||||| ||||| ||||    
T  9699966 -tttgttatcgaaatagcttatacataa 9699940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 212
Target Start/End: Complemental strand, 11795146 - 11795028
Alignment:
Q  93 tgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatag 192  Q
    |||||| | ||| |||||||||||| || |  ||||||||| ||| |||||||||  |||||||||||| || |||||||||| ||| | ||| | ||||    
T  11795146 tgttttcagcttatttccataagctctccataatagcttatgaaatcagcttataacttatatgaaaacagtgtgactttattgtatgt-tttgtcatag 11795048  T
Q  193 aaatagattatatataagca 212  Q
    ||| || ||||| |||||||    
T  11795047 aaaaagcttatacataagca 11795028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 26820216 - 26820150
Alignment:
Q  130 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 197  Q
    |||| ||||| ||||||||||||||  ||||  ||||||||||||||||||| ||| |||||||||||    
T  26820216 ttatgaaaacggcttatagtttataacaaaatagtttgactttattttatct-tttgttatagaaata 26820150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 30013240 - 30013189
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 176  Q
    ||||||||| |||||||||||||| ||||||| |||| ||||||||| ||||    
T  30013240 atagcttatgaaaacagcttatagcttatatggaaacagtttgacttaattt 30013189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 42215316 - 42215411
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctc 182  Q
    ||||| |||||| | ||| ||| |||||||| || || ||||| ||| |||| || |||||| |||||  ||||| ||||||||||||||||||||    
T  42215316 ataagctgttttcagcttatttacataagctctccaggatagcatatgaaaataggttatagattatacaaaaacagtttgactttattttatctc 42215411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 176
Target Start/End: Original strand, 26284800 - 26284894
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 176  Q
    |||| |||||||||||| | ||| ||| |||||||| |  || ||| ||||  |||||| ||| || ||||||||||||| ||||||||||||||    
T  26284800 tgtctataagttgttttcagcttattttcataagctatacaggataacttacgaaaacaacttgtactttatatgaaaacagtttgactttattt 26284894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 29699266 - 29699161
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcc 234  Q
    |||||||||||||  ||| |||| |||  |||||||||||||||||| ||| |||||||||||  || || |||||||  ||||||| ||| | |||| |    
T  29699266 aaaacagcttataacttagatgacaacattttgactttattttatct-tttgttatagaaataacttgtacataagcatttatatgataaatatttatgc 29699168  T
Q  235 tataagc 241  Q
    |||||||    
T  29699167 tataagc 29699161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 31862553 - 31862459
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||| |||||| | ||| ||| |||||||| ||||| ||| ||||| |||||| ||||||| ||||| || ||  |||||||||||| ||||||    
T  31862553 ataagctgttttcagcttattttcataagctctctaggataacttatgaaaacatcttatagcttatacgagaatagtttgactttatattatct 31862459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 35453671 - 35453784
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaa 224  Q
    ||||||||  |||||| | ||||  ||||||||||   |||| |||||||||||||| ||| || |||||| |||||||||||||| || ||||||| ||    
T  35453671 atagcttaaaaaaacaacctataacttatatgaaactagtttaactttattttatct-tttgttgtagaaacagattatatataagtacttatatgacaa 35453769  T
Q  225 acacttatcctataa 239  Q
     | ||||| ||||||    
T  35453770 gcgcttatgctataa 35453784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 40280185 - 40280227
Alignment:
Q  36 cacttgtgagcttgtttgtgagagtttatggaaacaacttatg 78  Q
    ||||| |||| ||||||| ||||||||||||||||||||||||    
T  40280185 cacttatgagattgtttgagagagtttatggaaacaacttatg 40280227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 42597420 - 42597339
Alignment:
Q  128 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 210  Q
    |||||| |||||| ||||||| ||  ||||||||  ||| |||||||||||||| ||| |||||||||||| ||||| |||||    
T  42597420 gcttatgaaaacaacttatagcttgcatgaaaacaattttactttattttatct-tttgttatagaaatagcttatacataag 42597339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 6918236 - 6918320
Alignment:
Q  134 taaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatat 219  Q
    |||| ||| |||||| ||||  |||||| ||||||||||||||||||| ||| ||||| |||||| ||||||| || ||| |||||    
T  6918236 taaagcagtttatagcttattagaaaacagtttgactttattttatct-tttattatataaatagcttatatacaaacacttatat 6918320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 8629070 - 8629025
Alignment:
Q  187 ttatagaaatagattatatataagcacatatatgagaaacacttat 232  Q
    |||||||||||| ||||| |||||||| ||||||| ||||||||||    
T  8629070 ttatagaaatagcttataaataagcacttatatgataaacacttat 8629025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 31885094 - 31885162
Alignment:
Q  112 taagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||| ||||| ||||||||  ||||||| |||||| |||||  |||||||||||||||| ||||||||    
T  31885094 taagctctctaggatagcttac-aaaacagtttatagcttatacaaaaacggtttgactttcttttatct 31885162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 39561557 - 39561661
Alignment:
Q  93 tgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatag 192  Q
    |||||| | ||| ||||||||||||||  |  ||||||||  |||||| ||||||||||| ||||||||   | |||||||||||||  |||| ||||||    
T  39561557 tgttttcagcttatttccataagcttttcatgatagcttacgaaaacaacttatagtttagatgaaaacaaatcgactttattttat-actttgttatag 39561655  T
Q  193 aaatag 198  Q
    ||||||    
T  39561656 aaatag 39561661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 40356854 - 40356798
Alignment:
Q  164 tttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    |||||||||||||||||| ||| ||||| |||||| ||||| |||||||| |||||||    
T  40356854 tttgactttattttatct-tttattatataaatagcttatagataagcacttatatga 40356798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 787158 - 787210
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||| ||||||| |||||| |||||||| |||  ||||||||||||||||||    
T  787158 cttatgaaaacagtttatagcttatatgataacaatttgactttattttatct 787210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 8062394 - 8062322
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 154  Q
    |||| ||||| |||||| | ||| ||||||||| || ||||  ||||||||| |||||||||||||| |||||    
T  8062394 tgtccataagatgttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagcttata 8062322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 30040598 - 30040664
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 197  Q
    ||||| |||||| ||||||||||||| |||||| | ||||||||||| ||| ||||| |||||||||||    
T  30040598 cttatgaaaacaacttatagtttata-gaaaacagattgactttattctat-tctttgttatagaaata 30040664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 31705145 - 31705073
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 159  Q
    ||||| |||||| | ||| ||||||||| || || || | ||||||| |||||||||||||| ||||||||||    
T  31705145 ataagctgttttcagcttatttccataaactctcaaggacagcttatgaaaacagcttatagcttatatgaaa 31705073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 39049385 - 39049305
Alignment:
Q  34 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataa 114  Q
    |||| ||||||| |||||||||| || ||||| |||||||||||    |||||||||| |||||| | ||||||| |||||    
T  39049385 aacatttgtgagattgtttgtgaaagcttatgaaaacaacttataacatgtcaataagctgttttcaacttgtttgcataa 39049305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 41336693 - 41336749
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||| ||||||  || ||||||||||||||||  ||||||| ||||||||||    
T  41336693 atagcttatgaaaacaagttctagtttatatgaaaacaatttgactatattttatct 41336749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 110 - 221
Target Start/End: Complemental strand, 44319986 - 44319877
Alignment:
Q  110 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 209  Q
    |||||| | ||||| ||||||||| |||| ||||| ||| |||||||||||| ||| ||||||||||||  |||||||||||||||||| ||||| || |    
T  44319986 cataagttctctaggatagcttatcaaaatagcttgtagcttatatgaaaacagttcgactttatttta--tcttttttatagaaatagtttatacatga 44319889  T
Q  210 gcacatatatga 221  Q
    |||| |||||||    
T  44319888 gcacttatatga 44319877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 36 - 220
Target Start/End: Complemental strand, 4071989 - 4071811
Alignment:
Q  36 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 135  Q
    ||||||||||  |||||| ||||| ||||| ||||| ||||||  ||||   ||||||||||| | ||| | |||||||||| ||||   |||||||| |    
T  4071989 cacttgtgagactgtttgagagagcttatgaaaacagcttatgatttgttggtaagttgttttcagctt-tgtccataagctctcta---tagcttatca 4071894  T
Q  136 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatg 220  Q
     |||| ||||||| |||||||||||   |||||||||||||||||| ||| |||||||||||| |||||||||| ||| ||||||    
T  4071893 taacaacttatagcttatatgaaaataatttgactttattttatct-tttgttatagaaatag-ttatatataaacacttatatg 4071811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 60 - 198
Target Start/End: Complemental strand, 24929580 - 24929443
Alignment:
Q  60 tttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 159  Q
    |||||||||||| ||||||   |||  |||| ||||||| | ||| |||||||||||| ||||| | || |||| |||||| ||||||| || |||||||    
T  24929580 tttatggaaacagcttatggcatgttcataaattgttttcagcttatttccataagctctctagtagagtttatgaaaacaacttatagcttttatgaaa 24929481  T
Q  160 acggtttgactttattttatctcttttttatagaaatag 198  Q
    || ||| ||||||||||||||| ||| ||||||||||||    
T  24929480 acagttagactttattttatct-tttgttatagaaatag 24929443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 54325085 - 54325180
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||| | |||| ||||||||| |||||||||||| ||||||||||||||||||| ||| | |||||||||| ||||| | |||||| |||||||    
T  54325085 atagcttttgaaaatagcttatagcttatatgaaaacagtttgactttattttatct-tttgtaatagaaatagtttatacacaagcacttatatga 54325180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 221
Target Start/End: Original strand, 8422897 - 8422980
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    |||||| ||||||| ||||||||||||  |  ||||||||||||||| ||||||||| |||||| ||||| ||||||||||||||||    
T  8422897 aaaacaacttatagcttatatgaaaacaat--gactttattttatct-ttttttataaaaatagcttatacataagcacatatatga 8422980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 30338650 - 30338727
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    ||||||| |||||| |||||||||||| |||| |||||||| ||||| ||| |||||||||||| ||||| ||||||||    
T  30338650 aaaacagtttatagcttatatgaaaacagtttaactttattctatct-tttgttatagaaatagtttatacataagcac 30338727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 36734893 - 36734820
Alignment:
Q  147 agtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||||||||||  |||||||||||||||| || ||| ||||||||| |||||||| |||||||| |||||||    
T  36734893 agtttatatgaaaatagtttgactttattttacct-tttgttatagaaagagattatacataagcacttatatga 36734820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 230
Target Start/End: Complemental strand, 21157822 - 21157686
Alignment:
Q  93 tgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatag 192  Q
    |||||| | ||| |||||||||||| |  || ||||| ||| |||||| ||||||| ||| |||||||| ||||||||||| |||||  |||| ||||      
T  21157822 tgtttttagcttatttccataagctcttcaggatagcatatgaaaacatcttatagcttacatgaaaacagtttgactttagtttat-actttgttatca 21157724  T
Q  193 aaatagattatatataagcacatatatgagaaacactt 230  Q
    |||||| | ||| |||||||| ||||||| ||||||||    
T  21157723 aaatagctgatacataagcacttatatgataaacactt 21157686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 11389531 - 11389461
Alignment:
Q  142 cttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    |||||||||||||| ||||| |||| |||||| ||||||| |||||||||||||||  ||||| ||||||||    
T  11389531 cttatagtttatattaaaacagtttaactttactttatct-ttttttatagaaataatttatacataagcac 11389461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 24091549 - 24091434
Alignment:
Q  61 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 160  Q
    ||||||||||||||||||  |||   || ||||||||| |  |||||||||||| | ||| || ||| ||||| ||||||| |||||| |||||||||||    
T  24091549 ttatggaaacaacttatgatttgcacattagttgttttcagtttgtttccataaaccttccaggataacttatgaaaacagtttatagcttatatgaaaa 24091450  T
Q  161 cggtttgactttattt 176  Q
       |||||||||||||    
T  24091449 taatttgactttattt 24091434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 210
Target Start/End: Original strand, 45128280 - 45128442
Alignment:
Q  47 ttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttat 146  Q
    ||||||| ||||| |||||||||||||| ||    |||| || || |||||| | ||| |||||||||||||| ||| | || |||| ||||||  ||||    
T  45128280 ttgtttgagagagcttatggaaacaactgatatcatgtccatgagctgttttcagcttatttccataagctttataggacagtttatgaaaacaatttat 45128379  T
Q  147 agtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 210  Q
    || |||||||| ||   ||||| || ||||||||| ||| |||||||||||| ||||| |||||    
T  45128380 agcttatatgagaataatttgatttgattttatct-tttgttatagaaatagtttatacataag 45128442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 53626795 - 53626729
Alignment:
Q  128 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaa 195  Q
    |||||| |||||||||||||| ||||||||||||  ||||| |||||||||||| ||| |||||||||    
T  53626795 gcttatgaaaacagcttatagcttatatgaaaacattttgaatttattttatct-tttgttatagaaa 53626729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 2980514 - 2980625
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctc----ttttttatagaaatagattatatataagcacatatatg 220  Q
    ||||||||| | |||| ||||||  || ||||||||  ||||||||||||||| | ||    ||| |||||||||||| ||||| |||||||| ||||||    
T  2980514 atagcttatgagaacaacttataacttgtatgaaaatagtttgactttattttgtttcattttttgttatagaaatagcttatacataagcacttatatg 2980613  T
Q  221 agaaacacttat 232  Q
    | ||||||||||    
T  2980614 ataaacacttat 2980625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 4191734 - 4191661
Alignment:
Q  153 tatgaaaacggtttgactttattttatctctttt-ttatagaaatagattatatataagcacatatatgagaaac 226  Q
    ||||||||| ||||||||||||||| | |||||| |||||||||||| ||||| |||||||| ||||||| ||||    
T  4191734 tatgaaaacagtttgactttatttt-tatcttttgttatagaaatagcttatacataagcacttatatgataaac 4191661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 7694020 - 7694114
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||||| | ||| ||||||||| || || || ||| ||||| |||||||||||||| |||||  ||||| ||||||||| |||| ||||    
T  7694020 ataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagcttatacaaaaacagtttgacttcatttcatct 7694114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 190
Target Start/End: Original strand, 30581700 - 30581790
Alignment:
Q  100 atcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttat 190  Q
    ||||| ||||||||| || || |  ||| |||||||||||||||||||| ||||| |||||  ||||||||| ||||||||| || |||||    
T  30581700 atcttatttccataaactctccaagataacttattaaaacagcttatagcttatacgaaaatagtttgacttcattttatcttttatttat 30581790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 32066453 - 32066549
Alignment:
Q  120 ctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatata 218  Q
    |||| ||||||||| |||||||||||||| | ||||||| ||||||| | |||||||||||| ||| ||||| || ||| ||||| |||||||| ||||    
T  32066453 ctaggatagcttataaaaacagcttatagctcatatgaacacggttt-aatttattttatct-tttgttataaaagtagtttatacataagcacttata 32066549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 32724116 - 32724043
Alignment:
Q  150 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaa 224  Q
    |||||||||||  ||||||||||||||||||| ||| | |||||||||||||| | ||||||||  |||||||||    
T  32724116 ttatatgaaaatagtttgactttattttatct-tttgtaatagaaatagattagacataagcactgatatgagaa 32724043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 49219199 - 49219090
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 186  Q
    |||||||||||| | ||| ||||||||| || | ||  |||| |||| |||||| ||||||| |||||||||||   |||||||||||||||| | |||     
T  49219199 ataagttgttttcagcttatttccataatctctttaagatagtttatgaaaacaacttatagcttatatgaaaataatttgactttattttatat-tttg 49219101  T
Q  187 ttatagaaata 197  Q
    |||||||||||    
T  49219100 ttatagaaata 49219090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 55870390 - 55870467
Alignment:
Q  126 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 204  Q
    |||||||| |||||| ||||||| |||| ||||||| |||||||||||||| |||| ||| ||||| |||| |||||||    
T  55870390 tagcttatgaaaacaacttatagcttatgtgaaaacagtttgactttatttgatct-tttgttataaaaatggattata 55870467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 18020013 - 18019944
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttata-gtttatatgaaaacggtttgactttat 174  Q
    ||||||||| || ||||||||||||||| |||||| || | | |||||||||||||| ||||||||||||    
T  18020013 tttccataaactctctagcatagcttatgaaaacaactcacaagtttatatgaaaacagtttgactttat 18019944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 179
Target Start/End: Complemental strand, 23819197 - 23819057
Alignment:
Q  39 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagct-ttctagcatagcttattaaa 137  Q
    |||||||  ||||||  |||||||| | ||||| ||||||   |||| |||||||||||| ||||| |||| ||||||| ||| || ||||||||| |||    
T  23819197 ttgtgagactgtttggaagagtttaagaaaacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaag-atagcttatgaaa 23819099  T
Q  138 acagcttatagtttatatgaaaacggtttgactttattttat 179  Q
    |||  |||||  |||||||||||| ||||||||  |||||||    
T  23819098 acatgttataacttatatgaaaacagtttgactacattttat 23819057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 242
Target Start/End: Complemental strand, 24444060 - 24443944
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaa 224  Q
    ||||||||| |||||| ||||||| |||||||||||  |||||| |||||||||| | ||| || ||||||| | ||||| ||||| || ||||||| ||    
T  24444060 atagcttatgaaaacaacttatagcttatatgaaaattgtttgaatttattttatat-tttgttgtagaaatcgcttatacataagaacttatatgataa 24443962  T
Q  225 acacttatcctataagcg 242  Q
       ||||| |||||||||    
T  24443961 gtgcttatgctataagcg 24443944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 30207582 - 30207713
Alignment:
Q  88 taagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttt 187  Q
    |||| |||||| | ||| ||||||||| || ||||   |||||||| |||||| ||||||| |||||||||||| |||||| |||||||||| | ||| |    
T  30207582 taagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttatatgaaaacagtttga-tttattttat-tttttgt 30207679  T
Q  188 tatagaaatagattatatataagcacatatatga 221  Q
    ||||||| ||   |||| |||||||| |||||||    
T  30207680 tatagaactaacatatacataagcacttatatga 30207713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 221
Target Start/End: Complemental strand, 3891611 - 3891504
Alignment:
Q  111 ataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 210  Q
    ||||||| ||||| ||||||||| |||||| |||| |  |||||  ||||||||| ||||||||||||||    | |||||||||||| ||||  |||||    
T  3891611 ataagctctctaggatagcttataaaaacaacttacatattatacaaaaacggttcgactttattttatc---ctgttatagaaatagtttattcataag 3891515  T
Q  211 cacatatatga 221  Q
    ||| |||||||    
T  3891514 cacttatatga 3891504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 18630702 - 18630607
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||| | |||||| ||||||| ||||||||||||   ||||||||||||||||| ||| |||| ||||||| ||||  |||||| | |||||||    
T  18630702 atagcttgtgaaaacaacttatagcttatatgaaaaccaattgactttattttatct-tttgttattgaaatagtttatgcataagcgcttatatga 18630607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 19422420 - 19422345
Alignment:
Q  145 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||||||||||||  ||||||||||||| ||||| ||| |||||||||||  ||||| |||||||  |||||||    
T  19422420 atagtttatatgaaaaatgtttgactttattatatct-tttgttatagaaataacttatacataagcatttatatga 19422345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 27123312 - 27123392
Alignment:
Q  37 acttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagct 117  Q
    |||||||||  |||||| ||||| ||||||||||||||||||   ||||  ||||||||||| | ||| ||||||||||||    
T  27123312 acttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagct 27123392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 46859952 - 46859896
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||| |||| |||||||||||||| || |||||||| | ||||||||||||||||||    
T  46859952 ataggttataaaaacagcttatagattgtatgaaaatgatttgactttattttatct 46859896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 13949893 - 13949948
Alignment:
Q  126 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||  ||||| ||||||| ||||||||||||  ||||||||||||||||||    
T  13949893 tagcttatacaaacaacttatagcttatatgaaaacaatttgactttattttatct 13949948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 181
Target Start/End: Original strand, 6987703 - 6987845
Alignment:
Q  39 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa 138  Q
    |||||||  |||||| ||||| ||||||| ||||||||||   |||| ||||  | |||| | ||| |||||||||||| || || ||||| ||  ||||    
T  6987703 ttgtgagactgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttatttccataagctctccaggatagcgtaaaaaaa 6987802  T
Q  139 cagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
     | || |||||| ||| |||||| |||||||||| ||||||||    
T  6987803 taactaatagttaatacgaaaacagtttgactttgttttatct 6987845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 29373939 - 29374020
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 211  Q
    ||||| ||||||  |||||| ||||||||| ||  |||||| ||||||||||| | | |||||||||||| ||||||||||||    
T  29373939 cttatgaaaacaaattatagcttatatgaatacattttgacattattttatct-tctgttatagaaatagcttatatataagc 29374020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 31038877 - 31038971
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||||| | ||| |||| ||||| | ||||  | ||||||| ||||  |||||||  ||||||||||||  ||||||||||||||||||    
T  31038877 ataagttgttttcaacttatttctataagttctctattagagcttataaaaatggcttataacttatatgaaaacaatttgactttattttatct 31038971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 47970302 - 47970245
Alignment:
Q  163 gtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||||| ||||||||| ||| |||||||||||| ||||| |||||||| |||||||    
T  47970302 gtttgacttcattttatct-tttgttatagaaatagcttatacataagcacttatatga 47970245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 50746017 - 50745936
Alignment:
Q  130 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagca 212  Q
    |||| |||||| ||| |||||||||| ||||| |||||| |||||||||||| ||| ||||| |||||| ||| | |||||||    
T  50746017 ttataaaaacaacttgtagtttatataaaaacagtttgattttattttatct-tttgttataaaaatagcttagacataagca 50745936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 2841732 - 2841675
Alignment:
Q  41 gtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgtttt 98  Q
    ||||| ||||||| ||||||||||| || |||||||||   |||||||||||||||||    
T  2841732 gtgagattgtttgcgagagtttatgaaagcaacttatgacatgtcaataagttgtttt 2841675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 2996672 - 2996539
Alignment:
Q  48 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 147  Q
    |||||| ||||| ||||| ||||||||||||   |||| ||||| | |||| | ||| ||| |||| ||| || |  ||||||||| |||||| ||||||    
T  2996672 tgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttata 2996573  T
Q  148 gtttatatgaaaacggtttgactttattttatct 181  Q
      |||||| |||||  ||||||| ||||||||||    
T  2996572 acttatataaaaacaatttgactgtattttatct 2996539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 21953297 - 21953217
Alignment:
Q  123 gcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 204  Q
    ||||||||||| ||||  |||||||| |||||| ||||  |||||||||||||||  || ||| |||||||||||| |||||    
T  21953297 gcatagcttatcaaaatggcttatagcttatataaaaagagtttgactttattttccct-tttgttatagaaatagtttata 21953217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 32920431 - 32920504
Alignment:
Q  108 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||| ||||  || ||| ||||| |||||| ||||||| || ||| |||||| ||||||||||||||||||    
T  32920431 tccataaacttttcaggataacttatgaaaacaacttatagcttctattaaaacgatttgactttattttatct 32920504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 42321937 - 42321982
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatc 180  Q
    |||||| |||||| |||||||||||||  |||||||||||||||||    
T  42321937 aaaacaacttataatttatatgaaaacaatttgactttattttatc 42321982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 42866108 - 42866047
Alignment:
Q  107 ttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttga 168  Q
    ||||||||||| || || ||||||||| |||||| ||||||| |||||| ||||| ||||||    
T  42866108 ttccataagctctcaaggatagcttatgaaaacaacttatagcttatataaaaacagtttga 42866047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 43824343 - 43824270
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 160  Q
    |||||||||||| | ||| ||||||||||||||| || ||| ||||  |||| ||||||||  |||||||||||    
T  43824343 ataagttgttttcagcttatttccataagctttccaggataacttacgaaaaaagcttataacttatatgaaaa 43824270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 927498 - 927442
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||  |||||  |||||| |||||||||||| |||||||||||||| ||||    
T  927498 atagcttatgcaaacaagttatagcttatatgaaaacagtttgactttatttcatct 927442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 3175973 - 3175917
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||| |||||||||||||  |||  |||||||  ||||||||||||||||||    
T  3175973 atagcttatgaaaacagcttataacttacttgaaaacaatttgactttattttatct 3175917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 7368090 - 7368181
Alignment:
Q  112 taagctttctagcatagcttattaaaacagcttata-gtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 203  Q
    |||||| ||||| |||||||||  ||||| |||||| | ||||||||||||  ||||||||||||||| || ||| | |||||||||| ||||    
T  7368090 taagctctctagaatagcttatggaaacaacttataagcttatatgaaaacaatttgactttatttta-ctttttatcatagaaatagtttat 7368181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 18628555 - 18628643
Alignment:
Q  89 aagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttt 177  Q
    |||||||||| | ||| |||||||||||| || |  ||| ||||| ||||||| |||||  |||||| ||||| |||||||| ||||||    
T  18628555 aagttgttttcagcttatttccataagctctccaagataacttatgaaaacagtttataacttatataaaaacagtttgactatatttt 18628643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 30024704 - 30024609
Alignment:
Q  143 ttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataa 239  Q
    |||||| ||||||||||||  ||| |||||||||||||| ||| |||||||||||  ||||  ||||| || ||||||| |||| ||| | ||||||    
T  30024704 ttatagcttatatgaaaacaattttactttattttatct-tttgttatagaaataacttatgcataagtacttatatgataaacgcttctactataa 30024609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 41097295 - 41097343
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttatttt 177  Q
    ||||| |||||||||||||| | |||||||||| ||||||||| |||||    
T  41097295 cttatgaaaacagcttataggtaatatgaaaacagtttgacttaatttt 41097343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 41701514 - 41701561
Alignment:
Q  150 ttatatgaaaacggtttgactttattttatctcttttttatagaaatag 198  Q
    ||||||||||||| |||||||||||||||||| ||| ||||| ||||||    
T  41701514 ttatatgaaaacgatttgactttattttatct-tttgttatataaatag 41701561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 51630133 - 51630077
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||| |||| ||||||||| |||||| |||||  ||| ||||||||||||||    
T  51630133 atagcttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatct 51630077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 56055810 - 56055739
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 159  Q
    |||||||||||| ||||| ||| ||||||| ||| || ||||||  |||||| ||||||||| ||||||||||    
T  56055810 ataagttgtttttatcttattttcataagc-ttccaggatagctagttaaaatagcttatagcttatatgaaa 56055739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 17952749 - 17952844
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||||| |||||| ||| ||| |||||||||||  ||||||||||||||||||| ||| |||||||||||| |||||||||||| | |||||||    
T  17952749 atagcttatgaaaacatcttgtagcttatatgaaaatagtttgactttattttatct-tttgttatagaaatagcttatatataagctcttatatga 17952844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 9556331 - 9556206
Alignment:
Q  55 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 154  Q
    ||||| ||||| |||||||| |||   |||| |||||| | ||| | ||| ||| |||||||||||||| ||||||||| ||||||| |||||| || ||    
T  9556331 gagagcttatgaaaacaactaatgacatgtccataagtagatttcaacttattttcataagctttctaggatagcttatgaaaacagtttatagcttgta 9556232  T
Q  155 tgaaaacggtttgactttattttatc 180  Q
    |||||||   ||||||||||||||||    
T  9556231 tgaaaacacgttgactttattttatc 9556206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 221
Target Start/End: Original strand, 28803537 - 28803649
Alignment:
Q  108 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatat 207  Q
    |||||||||| || || |||| |||  |||||| ||| ||| |||||||||| | ||||||||||||||||||| ||| |||| ||||||  ||||||||    
T  28803537 tccataagctctccaggatagtttaagaaaacaacttgtagcttatatgaaatcagtttgactttattttatct-tttgttatcgaaataacttatatat 28803635  T
Q  208 aagcacatatatga 221  Q
    |||||| |||||||    
T  28803636 aagcacttatatga 28803649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 33256759 - 33256706
Alignment:
Q  128 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||| ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  33256759 gcttatgaaaactgcttatagtttatatgaaaacagtttgactttattttatct 33256706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 110 - 221
Target Start/End: Original strand, 33267556 - 33267659
Alignment:
Q  110 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 209  Q
    |||||||| || |||||||||||| |||||||||||||       ||||||| |||| ||||||||||| || ||| |||||||||||||||||| ||||    
T  33267556 cataagctctccagcatagcttataaaaacagcttata-------tgaaaacagtttaactttatttta-ctgtttgttatagaaatagattatacataa 33267647  T
Q  210 gcacatatatga 221  Q
    |||| |||||||    
T  33267648 gcacttatatga 33267659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 12215845 - 12215742
Alignment:
Q  109 ccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatata 208  Q
    ||||||||| || || || |||||| ||||||||||||||  |||||| |||||| | ||||||||||||||| ||| || ||||||||| ||||| |||    
T  12215845 ccataagctctcaaggatggcttataaaaacagcttatagcatatatggaaacgggtcgactttattttatct-tttgttgtagaaatagtttatacata 12215747  T
Q  209 agcac 213  Q
    |||||    
T  12215746 agcac 12215742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 6227811 - 6227701
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 186  Q
    |||||||||||| | |||||| ||||||||| || |  ||||||||| |||||  |||||||||||||| |||||||||| | || ||||||||| |||     
T  6227811 ataagttgttttcagcttgttaccataagctctccaaaatagcttatgaaaaccacttatagtttatataaaaacggtttaatttaattttatct-tttg 6227713  T
Q  187 ttatagaaatag 198  Q
    ||||| ||||||    
T  6227712 ttatataaatag 6227701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 18962086 - 18962188
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaa 224  Q
    ||||||||| |||| || |||||| |||||||||||| |||| |||||||||||||| ||| ||||| |||||| | ||| |||||||| || |||| ||    
T  18962086 atagcttatgaaaatagtttatagcttatatgaaaacagtttaactttattttatct-tttgttataaaaatagctaatacataagcacttacatgataa 18962184  T
Q  225 acac 228  Q
    ||||    
T  18962185 acac 18962188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 18884883 - 18884789
Alignment:
Q  146 tagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataag 240  Q
    |||| ||||||||||| |||||| |||||||||| | |||||||||||||||  ||||| || ||||| ||||||| ||| ||| || |||||||    
T  18884883 tagtgtatatgaaaacagtttgattttattttatattttttttatagaaataacttatacatgagcacttatatgataaaaactaatgctataag 18884789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 22681195 - 22681289
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||| |||||| | ||| |||||||||| | ||||| |||| |||| |||||||||||||| ||||||||||||  |||| |||| ||||||||    
T  22681195 ataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatct 22681289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 221
Target Start/End: Original strand, 7103492 - 7103624
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa-cagcttatagtttatatgaaaacggtttgactttattttatctcttt 185  Q
    |||||||||||| | ||| ||| || || || ||||  ||||||||| |||| |||||||||| |||||| ||||| ||||||||||||||||||   ||    
T  7103492 ataagttgtttttagcttattttcacaaactctctaagatagcttatgaaaaacagcttatagcttatattaaaacagtttgactttattttatc---tt 7103588  T
Q  186 tttatagaaatagattatatataagcacatatatga 221  Q
     ||||| | |||| || || ||||||||||||||||    
T  7103589 gttataaatatagtttctacataagcacatatatga 7103624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 207
Target Start/End: Original strand, 1939323 - 1939461
Alignment:
Q  68 aacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatag-tttatatgaaaacggttt 166  Q
    |||||||||||   |||| ||||| |||||| | ||| |||||||||||| || || ||||||||| ||||||| |||||| |  |||||||||  ||||    
T  1939323 aacaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaacag-ttatagctcaatatgaaaatagttt 1939421  T
Q  167 gactttattttatctcttttttatagaaatagattatatat 207  Q
     |||||||||||||| ||| |||||||||||  ||||||||    
T  1939422 cactttattttatct-tttgttatagaaataacttatatat 1939461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 5043608 - 5043664
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||| |||||| ||| ||| |||||||||||| |||||||||||||||||||    
T  5043608 atagcttatgaaaacaacttctagcttatatgaaaacagtttgactttattttatct 5043664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 11513920 - 11513864
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||| |||||| ||||||| ||||||||||||  ||||||||||||||||||    
T  11513920 atagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatct 11513864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 181
Target Start/End: Complemental strand, 43141953 - 43141837
Alignment:
Q  65 ggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggt 164  Q
    ||||||||||||||   || | |||||||||||| || || ||||||||| || |  || ||||||||| |||||| ||||||| ||||||| ||||  |    
T  43141953 ggaaacaacttatgacatgcccataagttgttttcattttatttccataaactcttcaggatagcttatgaaaacatcttatagcttatatggaaacaat 43141854  T
Q  165 ttgactttattttatct 181  Q
    ||||||||| |||||||    
T  43141853 ttgactttactttatct 43141837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 5133813 - 5133703
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatat 205  Q
    |||||||||||| |||   ||| ||| | |||||||||||||  |||||| ||||| ||||  ||||||||||||| ||| |||||||||||| |||||     
T  5133813 tttccataagctctcttagataacttttgaaaacagcttatatcttatataaaaacagtttatctttattttatct-tttgttatagaaatagcttatac 5133715  T
Q  206 ataagcacatat 217  Q
    ||||||| ||||    
T  5133714 ataagcaaatat 5133703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 212
Target Start/End: Complemental strand, 13866911 - 13866825
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagca 212  Q
    |||||| || |||| ||||||||| |||||| ||||| ||||||||| ||||||||| |||  ||||||||||| ||||| |||||||    
T  13866911 atagctaatgaaaagagcttatagattatataaaaacagtttgacttaattttatct-tttgctatagaaatagtttatacataagca 13866825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 212
Target Start/End: Original strand, 32098384 - 32098442
Alignment:
Q  153 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagca 212  Q
    |||||||||  |||||||||||||||||| ||| |||||||||||| |||||||||||||    
T  32098384 tatgaaaacactttgactttattttatct-tttgttatagaaatagcttatatataagca 32098442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 33192190 - 33192128
Alignment:
Q  150 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    |||||||||||| ||||||||||||||||||| | | |||||||||||| || |||||||||||    
T  33192190 ttatatgaaaacagtttgactttattttatct-tatgttatagaaatagtttttatataagcac 33192128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 177
Target Start/End: Original strand, 33525945 - 33526067
Alignment:
Q  55 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 154  Q
    ||||||| |||||||||||||||    |||| |||||||| ||| | ||| |||| |||| | |||||| ||||||||| |||| |||||||    ||||    
T  33525945 gagagttcatggaaacaacttataacatgtccataagttggtttcagcttatttctataaaccttctagtatagcttatgaaaaaagcttattacatata 33526044  T
Q  155 tgaaaacggtttgactttatttt 177  Q
    ||||||  |||||||||||||||    
T  33526045 tgaaaatagtttgactttatttt 33526067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 3059303 - 3059372
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttata-gtttatatgaaaacggtttgactttat 174  Q
    ||||||||| || ||||||||||||||| |||||| || | | |||||||||||||| ||||||||||||    
T  3059303 tttccataaactctctagcatagcttatgaaaacaactcacaagtttatatgaaaacagtttgactttat 3059372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 221
Target Start/End: Complemental strand, 9478398 - 9478226
Alignment:
Q  48 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 147  Q
    |||||| ||||||||||| |||||||||||    |||| ||||| |||||| |||||  |||||| | || || |  ||||||||  || ||||| ||||    
T  9478398 tgtttgagagagtttatgcaaacaacttattacatgtccataagctgttttcatcttacttccatcaactctccacgatagcttacgaacacagcatata 9478299  T
Q  148 gtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    | |||||||||||   ||||| ||||||||||||   | |||||||||||| ||||| |||| ||| |||||||    
T  9478298 gcttatatgaaaatattttgagtttattttatct-actgttatagaaatagcttatacataaacacttatatga 9478226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 209
Target Start/End: Complemental strand, 25790185 - 25790065
Alignment:
Q  88 taagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttt 187  Q
    |||| |||||| | ||| ||| |||||||| || || |||| ||||  |||||  || ||| |||||||||||| ||||||||| | ||||||| |||||    
T  25790185 taagctgttttgaacttattttcataagctctccaggatagattatccaaacaatttgtagcttatatgaaaacagtttgacttcactttatct-ttttt 25790087  T
Q  188 tatagaaatagattatatataa 209  Q
    |||||||||| |||||| ||||    
T  25790086 tatagaaatatattatacataa 25790065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 28039315 - 28039436
Alignment:
Q  60 tttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 159  Q
    |||||| |||||| |||||  ||||  ||||| |||||| | ||| |||||||||  |||| |  | ||||||| ||||  |||||||||||||||||||    
T  28039315 tttatgaaaacaagttatgacttgttcataagctgttttcagcttatttccataacttttccaagaaagcttatgaaaattgcttatagtttatatgaaa 28039414  T
Q  160 acggtttgactttattttatct 181  Q
    ||  || |||||||||||||||    
T  28039415 acaattggactttattttatct 28039436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 31461421 - 31461365
Alignment:
Q  164 tttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||| ||| |||||||    
T  31461421 tttgactttattttatct-tttgttatagaaatagcttatatataaccacttatatga 31461365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 33942169 - 33942116
Alignment:
Q  128 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||| |||||| ||||||| ||| |||||||| |||||||||||||||||||    
T  33942169 gcttatgaaaacaacttatagcttacatgaaaacagtttgactttattttatct 33942116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 34054936 - 34055036
Alignment:
Q  112 taagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 211  Q
    |||||| | ||| ||||||||| |||||| ||||||   |||||| |||| ||||| ||||||||||||| ||| ||||||||||||  |||| ||||||    
T  34054936 taagctctataggatagcttatgaaaacaccttatatcatatatgtaaacagtttgcctttattttatct-tttgttatagaaatagcctatacataagc 34055034  T
Q  212 ac 213  Q
    ||    
T  34055035 ac 34055036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 37034038 - 37033982
Alignment:
Q  153 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 210  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||| ||||| |||||    
T  37034038 tatgaaaatcgtttgactttattttatct-ttttttatagaaatagtttatacataag 37033982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 131
Target Start/End: Original strand, 41809202 - 41809299
Alignment:
Q  34 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagctt 131  Q
    ||||||||||||  || |||| |||| || |||||||||||||||   |||  |||||||||||| | ||| |||||||||||||||||  |||||||    
T  41809202 aacacttgtgagactgattgtaagagcttgtggaaacaacttatgacatgttcataagttgtttttagcttatttccataagctttctaagatagctt 41809299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 241
Target Start/End: Original strand, 42817387 - 42817539
Alignment:
Q  88 taagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttt 187  Q
    ||||||||||| | |||  ||||||||||| |  || ||||||||| ||||||| ||||   |||||||||||| | ||||||| ||||||||| |||      
T  42817387 taagttgtttttagcttacttccataagctcttcagaatagcttatgaaaacagtttattacttatatgaaaacagcttgacttcattttatct-tttgg 42817485  T
Q  188 tatagaaatagattatatataagcacatatatgagaaacacttatcctataagc 241  Q
    ||||||||||   |||| || | ||| ||||||| |||| ||||| ||||||||    
T  42817486 tatagaaataacatataaatcaacacttatatgataaacgcttatgctataagc 42817539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 11393433 - 11393528
Alignment:
Q  145 atagtttatatgaaaacgg-tttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataag 240  Q
    |||| |||||||||||||  ||||| |||||| ||||| |||  ||||||||||| ||||| |||||||| ||||||| |||||||| | |||||||    
T  11393433 atagcttatatgaaaacgaatttgaatttattatatct-tttgatatagaaatagcttatagataagcacttatatgataaacacttgtgctataag 11393528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 11410094 - 11410189
Alignment:
Q  145 atagtttatatgaaaacgg-tttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataag 240  Q
    |||| |||||||||||||  ||||| |||||| ||||| |||  ||||||||||| ||||| |||||||| ||||||| |||||||| | |||||||    
T  11410094 atagcttatatgaaaacgaatttgaatttattatatct-tttgatatagaaatagcttatagataagcacttatatgataaacacttgtgctataag 11410189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 25609882 - 25609731
Alignment:
Q  61 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 160  Q
    ||||||||||||||||||     || ||| |||||||| |  || ||||| ||| |||||||| |||  || | |||||| ||||||| ||||| |||||    
T  25609882 ttatggaaacaacttatgacaaatccatatgttgttttcaatttctttccttaaactttctagtataatttctaaaaacaacttatagcttatacgaaaa 25609783  T
Q  161 cggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
        ||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  25609782 taaattgactttattttatct-tttcttatagaaatagcttatacataagcac 25609731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 37053616 - 37053521
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    |||||| || |||| | ||||||  |||||||||||| ||||||||||||||||| | | | ||||||||||||  |||| |||||||| |||||||    
T  37053616 atagctaatgaaaaaaacttataacttatatgaaaacagtttgactttattttat-tttctgttatagaaatagtctatacataagcacttatatga 37053521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 14666633 - 14666514
Alignment:
Q  62 tatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaac 161  Q
    |||||||||||||||||   |||  ||| |||||||| | ||| ||| ||||||| | | |  ||||||| | |||||| ||||||  |||||||||| |    
T  14666633 tatggaaacaacttatgacatgttcataggttgttttcaccttattttcataagcataccaagatagcttgtgaaaacaacttataacttatatgaaatc 14666534  T
Q  162 ggtttgactttattttatct 181  Q
     |||||||||||||||||||    
T  14666533 agtttgactttattttatct 14666514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 212
Target Start/End: Complemental strand, 15377787 - 15377701
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagca 212  Q
    ||||||||| |||||||||||||  ||||||||||||  | | ||||||||||||| ||||  ||||||| ||| ||||| |||||||    
T  15377787 atagcttatgaaaacagcttataacttatatgaaaacaatctaactttattttatc-ctttggtatagaagtagcttataaataagca 15377701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 18066150 - 18066099
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 176  Q
    ||||||||| |||||||||||||| ||||||||||||  ||| |||||||||    
T  18066150 atagcttatgaaaacagcttatagcttatatgaaaacaatttaactttattt 18066099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 18840861 - 18840762
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||||||||||| ||||| |||||||||||| || |  | | ||||| ||| ||||||||||  ||||| ||||  | ||| |||||||||||||    
T  18840861 tgtcaataagttgttttcatcttatttccataagctctccaagacatcttataaaaccagcttatagaatatattaaaatagcttggctttattttatct 18840762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 209
Target Start/End: Complemental strand, 42458041 - 42457887
Alignment:
Q  55 gagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttat 153  Q
    ||||||||||| ||||||||||   |||| ||||||||||||||| | ||| ||| |||| | | ||||  ||||||||| || |||||| | || |||     
T  42458041 gagagtttatgaaaacaacttaaaacattttcaataagttgttttcagcttattttcatatgttctctaagatagcttatgaatacagctaagagcttaa 42457942  T
Q  154 atgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 209  Q
    |  |||||  ||| |||||||||||||| |||  ||||||||||||||||| ||||    
T  42457941 acaaaaacaatttaactttattttatct-tttactatagaaatagattatacataa 42457887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 3102710 - 3102609
Alignment:
Q  130 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacact 229  Q
    |||| ||||||||| |||| |||||| ||||  ||||||||||||||||| | |||  |||| |||||| ||||| |||||||  ||||||| ||||| |    
T  3102710 ttatgaaaacagctaatagattatataaaaatagtttgactttattttatat-tttgctataaaaatagcttatacataagcagttatatgataaacatt 3102612  T
Q  230 tat 232  Q
    |||    
T  3102611 tat 3102609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 3235442 - 3235483
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttatttt 177  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  3235442 aaaacagcttatagtttatatg-aaacagtttgactttatttt 3235483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 3673829 - 3673724
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaa 224  Q
    |||||| || |||| | ||||||  ||||||||||||  ||| |||||||||||| | ||| |||||||||||  | ||| |||||||| ||||||| ||    
T  3673829 atagctaatgaaaaaaacttataacttatatgaaaacaatttaactttattttatat-tttgttatagaaataactaatacataagcacttatatgacaa 3673731  T
Q  225 acactta 231  Q
    |||||||    
T  3673730 acactta 3673724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 4550789 - 4550743
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||| |||||||||||||||||||| | ||||| |||||||||||    
T  4550789 aaaacaacttatagtttatatgaaaacagcttgacgttattttatct 4550743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 221
Target Start/End: Original strand, 13630339 - 13630424
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    |||||| ||||| | |||||||||||| |||||||||||| |||||| |||  || |||||||  ||||| |||||||| |||||||    
T  13630339 aaaacaacttattgattatatgaaaacagtttgactttatcttatct-tttgatagagaaataacttatacataagcacctatatga 13630424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 13736326 - 13736392
Alignment:
Q  110 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 176  Q
    |||||||| ||||| ||||||||| |||||||||||||| | || ||||||  ||||||||| ||||    
T  13736326 cataagctctctagtatagcttatgaaaacagcttatagctgatgtgaaaatagtttgacttcattt 13736392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 209
Target Start/End: Original strand, 30537537 - 30537658
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 186  Q
    ||||| |||||||  ||| ||||  |||||| || || ||||||||  | || ||||||||| |||||||||||| |||||||||||| | |||| ||      
T  30537537 ataagctgttttaggcttatttcattaagctctccagaatagcttacgagaatagcttatagcttatatgaaaactgtttgactttatatgatct-ttag 30537635  T
Q  187 ttatagaaatagattatatataa 209  Q
    |||||||||||| ||| ||||||    
T  30537636 ttatagaaatagcttacatataa 30537658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 35459907 - 35459818
Alignment:
Q  150 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataag 240  Q
    ||||| ||||||  |||||||||||||||||| |||  |||| |||||| ||||| | || ||| ||||||| |||||||||| |||||||    
T  35459907 ttatacgaaaacaatttgactttattttatct-tttggtatacaaatagcttatacaaaatcacttatatgataaacacttatgctataag 35459818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 6547285 - 6547248
Alignment:
Q  36 cacttgtgagcttgtttgtgagagtttatggaaacaac 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  6547285 cacttgtgagactgtttgtgagagtttatggaaacaac 6547248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 7283079 - 7283002
Alignment:
Q  64 tggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacag 141  Q
    |||||||||||||||   |||| |||||||||||| ||||| | |||||||||| ||   |||||||||| |||||||    
T  7283079 tggaaacaacttatgatatgtccataagttgttttcatcttatatccataagctctcccacatagcttatgaaaacag 7283002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 147
Target Start/End: Complemental strand, 11488388 - 11488277
Alignment:
Q  34 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 133  Q
    ||||||| | || |||||| |||||| ||||| |||||||||||| || |||| ||||||||||| | ||| ||| ||||| || || || |||||||||    
T  11488388 aacacttttaagattgtttatgagagcttatgaaaacaacttatg-atggtca-taagttgttttcagcttatttgcataatctctccaggatagcttat 11488291  T
Q  134 taaaacagcttata 147  Q
     ||| |||||||||    
T  11488290 gaaagcagcttata 11488277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 15780099 - 15780006
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||||| |||||| ||||||| |||||||||||| ||||   |||||||||||| ||| ||||||| || | ||||| ||||| || |||||||    
T  15780099 atagcttatgaaaacaacttatagattatatgaaaaccgttt--atttattttatct-tttgttatagagattgtttataaataagaacttatatga 15780006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 30552614 - 30552727
Alignment:
Q  48 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagtt-gttttaatcttgtttccataagctttctagcatagcttattaaaacagcttat 146  Q
    |||||| || || |||| |||||||||||||   |||||||||||| ||||| | ||| |||||||||||| ||||| |||| |||| |||| |  ||||    
T  30552614 tgtttgagataggttatcgaaacaacttatgacatgtcaataagttggtttttagcttatttccataagctctctaggatagtttatgaaaataatttat 30552713  T
Q  147 agtttatatgaaaa 160  Q
    || | |||||||||    
T  30552714 agctgatatgaaaa 30552727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 31740019 - 31740079
Alignment:
Q  137 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 198  Q
    |||| ||||||| |||||||||||  ||||||||||||||||||| ||  ||||||||||||    
T  31740019 aacaacttatagcttatatgaaaatagtttgactttattttatct-ttagttatagaaatag 31740079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 35329880 - 35329972
Alignment:
Q  138 acagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactta 231  Q
    ||||||||||| |||| ||||| | | ||||||||||||||||| | | |||| ||||||| ||||  |||| ||| ||||||| |||||||||    
T  35329880 acagcttatagcttatgtgaaagcagcttgactttattttatct-tatgttatggaaatagtttatgcataaacacttatatgataaacactta 35329972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 1493565 - 1493656
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||| |||||||| ||||| ||||||||||||   | |||||||||||||||  || ||||||||| || ||||| |||||||  |||||||    
T  1493565 cttatgaaaacagcatatagcttatatgaaaacaactagactttattttatct-attgttatagaaagagtttataaataagcaattatatga 1493656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 221
Target Start/End: Original strand, 6993757 - 6993866
Alignment:
Q  110 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 209  Q
    |||||||| || |||||||||||| |||||| | ||||| ||||||||| |   |||||| ||||||||  |||||| | ||||||||| ||| | ||||    
T  6993757 cataagctctcaagcatagcttatgaaaacaacctatagcttatatgaatataatttgaccttatttta--tcttttgtgtagaaataggttaaacataa 6993854  T
Q  210 gcacatatatga 221  Q
    | || |||||||    
T  6993855 gtacttatatga 6993866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 9395142 - 9395083
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaa 195  Q
    |||||||||||||| ||||||||||||  |||  ||||||||||||| |||| ||||||||    
T  9395142 aaaacagcttatagattatatgaaaacaatttagctttattttatct-ttttctatagaaa 9395083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 9551599 - 9551547
Alignment:
Q  127 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 179  Q
    ||||||| |||| || ||||||||||||  ||||| |||||||||||||||||    
T  9551599 agcttatgaaaataggttatagtttatacaaaaacagtttgactttattttat 9551547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 25800851 - 25800815
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaac 161  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  25800851 atagcttatgaaaacagcttatagcttatatgaaaac 25800815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 26282057 - 26282117
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggttt 166  Q
    ||||||||||||||| |  ||||| ||| | ||||||||||||||||||||| ||| ||||    
T  26282057 tttccataagctttccatgatagcctatgacaacagcttatagtttatatgataacagttt 26282117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 28810431 - 28810514
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatat 219  Q
    ||||||| |||||| ||||||| |||| ||| || |||||||||| | ||| |||||| ||||| |||||  |||||||||||||    
T  28810431 aaaacagattatagcttatatggaaacagttcgaatttattttatat-tttattataggaatagcttatacttaagcacatatat 28810514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 29430765 - 29430695
Alignment:
Q  137 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 209  Q
    |||||||||||| ||||| |||||| ||||||||||| |||| || ||| |||||||||||| ||||| ||||    
T  29430765 aacagcttatagcttataagaaaacagtttgacttta-tttaact-tttgttatagaaatagcttatacataa 29430695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 32821900 - 32821808
Alignment:
Q  56 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatag 148  Q
    ||||||||| |||||||||||||   |||| ||||| |||||| |  || |||| ||||||| | ||| ||||||||| ||||||| ||||||    
T  32821900 agagtttatagaaacaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaacagtttatag 32821808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 33197327 - 33197382
Alignment:
Q  165 ttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||||||| ||||| ||| |||||||||||| ||||| |||||||| |||||||    
T  33197327 ttgactttattctatct-tttgttatagaaatagcttatagataagcacttatatga 33197382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 37766810 - 37766766
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttat 179  Q
    |||||| ||||||||||||| ||||||  ||||||||||||||||    
T  37766810 aaaacaacttatagtttatacgaaaacattttgactttattttat 37766766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 43299451 - 43299507
Alignment:
Q  126 tagcttattaaaacagcttatag-tttatatgaaaacggtttgactttattttatct 181  Q
    |||||||| |||||| ||||||| ||||||  ||||| |||||||||||||||||||    
T  43299451 tagcttatgaaaacaacttatagatttatacaaaaacagtttgactttattttatct 43299507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 241
Target Start/End: Complemental strand, 47004108 - 47003994
Alignment:
Q  126 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaa 225  Q
    |||||||| |||||||||||||||| |||| ||||  |||||||||||||||||||  || |||||||||||| ||| |||||| ||| ||||||| |||    
T  47004108 tagcttatgaaaacagcttatagttcatataaaaatagtttgactttattttatct-attgttatagaaatagcttacatataaacacttatatgataaa 47004010  T
Q  226 cacttatcctataagc 241  Q
    || || | ||||||||    
T  47004009 catttttgctataagc 47003994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 9527140 - 9527225
Alignment:
Q  127 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||||||| ||||| ||| ||||||| ||||  |||||||||||||    
T  9527140 agcttatgaaaacaacttatagtttatatgaaaacagtttgactttattatatct-tttgttatagatatagcgtatatataagcac 9527225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 241
Target Start/End: Original strand, 27481253 - 27481457
Alignment:
Q  36 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 135  Q
    |||||||||| ||||||||||||| |||| | || |||||| |   |||| ||||  ||||||    || |||||||||||| || |  ||||||||| |    
T  27481253 cacttgtgagattgtttgtgagagcttatagcaataacttacgatatgtctataaactgttttgggtttatttccataagctatccatgatagcttatga 27481352  T
Q  136 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcct 235  Q
    ||| | ||||||| ||||||| |||| |||||||||  ||||||| |||| |||||||||||| ||||| |||| ||| ||||| | ||||| |||| ||    
T  27481353 aaataacttatagcttatatggaaacagtttgacttcgttttatc-ctttgttatagaaatagcttatacataaacacttatataataaacatttatgct 27481451  T
Q  236 ataagc 241  Q
    ||||||    
T  27481452 ataagc 27481457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 3802187 - 3802265
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 204  Q
    ||||||| | ||||||||||||| |||||||||||||| ||||||||||||||| || ||| |||||||||||| |||||    
T  3802187 atagcttttaaaaacagcttataatttatatgaaaacgatttgactttattttacct-tttattatagaaatagcttata 3802265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 125 - 220
Target Start/End: Complemental strand, 11208471 - 11208377
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatg 220  Q
    ||||||||| |||||| | ||||||||||||||||||||||||| |||||||||||| ||| || ||||| ||  |||||||||||| | ||||||    
T  11208471 atagcttatgaaaacaacatatagtttatatgaaaacggtttgagtttattttatct-tttgttgtagaattatcttatatataagcgcttatatg 11208377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 210
Target Start/End: Original strand, 27121557 - 27121718
Alignment:
Q  40 tgtgagcttgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa 138  Q
    |||||| ||||||| ||||||||||||||| | |||||| ||||  ||||||| |||||| | |||||||||||||||| || || |||||||||| | |    
T  27121557 tgtgagattgtttgggagagtttatggaaatagcttatgacatt--caataagctgttttcaacttgtttccataagctctcaagtatagcttatttaca 27121654  T
Q  139 cagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 210  Q
    ||||       ||||||||||||  |||||||||||||||||  ||| |||||||||||  ||||| |||||    
T  27121655 cagc-------ttatatgaaaacaatttgactttattttatc-atttattatagaaatatcttatacataag 27121718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 213
Target Start/End: Complemental strand, 33894738 - 33894558
Alignment:
Q  36 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagctta--- 132  Q
    ||||||||||  |||||||||||| ||||| ||||| | ||||   |||| |||||||||||| | ||| |||| |||| ||||| || ||||||||       
T  33894738 cacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataagttgttttcagcttatttcaataaactttccaggatagcttaagt 33894639  T
Q  133 --ttaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
      | |||||| | || || |||||||||||| ||||||||| ||||||||| ||| |||||||||||| ||||| ||||||||    
T  33894638 tgtaaaaacaacataaagcttatatgaaaacagtttgactt-attttatct-tttgttatagaaatagcttatacataagcac 33894558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 197
Target Start/End: Original strand, 48157082 - 48157239
Alignment:
Q  39 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa 138  Q
    |||||||  |||||| ||||| |||| ||||||||||||||  |||| ||||| |||||| | ||| |||||||||| | ||  | ||||||| | ||||    
T  48157082 ttgtgagactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagcttatttccataagatctcccgaatagcttgtgaaaa 48157181  T
Q  139 cagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 197  Q
    ||  |||||| |||||| |||||  ||| |||||||||||||| ||| |||||||||||    
T  48157182 caaattatagcttatattaaaacaatttcactttattttatct-tttattatagaaata 48157239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 28340878 - 28340985
Alignment:
Q  111 ataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 210  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||||||| |||  |||||||| |||| |||| ||| ||||| ||||||  |||| |||||    
T  28340878 ataagctctctaggatagcttatgaaaacagcttatagcttatatgacaacaatttgacttcatttcatct-tttattataaaaatagcatatagataag 28340976  T
Q  211 cacatatat 219  Q
    ||| |||||    
T  28340977 cacttatat 28340985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 38010774 - 38010680
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||| |||||| | ||| |||||||||| | ||||| |||| |||| |||||||||||||| ||||||||||||  |||| |||| ||||||||    
T  38010774 ataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatct 38010680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 210
Target Start/End: Complemental strand, 4966266 - 4966094
Alignment:
Q  37 acttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaa 136  Q
    |||||||||  |||||  ||||| |||| ||||| |||||||   |||| |||||||||||| |  || |||||||||||| |  || || |||||| ||    
T  4966266 acttgtgagactgtttaggagagcttatagaaaccacttatgatatgtccataagttgttttcagtttatttccataagctcttcaggatggcttatgaa 4966167  T
Q  137 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 210  Q
    |||||||||||  | |||||||||| ||||||  |||||||||| |||| || | ||||||  |||||||||||    
T  4966166 aacagcttatacctaatatgaaaactgtttgatattattttatc-ctttgttgtggaaataacttatatataag 4966094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 17989073 - 17989125
Alignment:
Q  127 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 179  Q
    ||||||| ||||||  ||||||||||||||||||| |||||||||||||||||    
T  17989073 agcttatgaaaacaaattatagtttatatgaaaacagtttgactttattttat 17989125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 1417285 - 1417203
Alignment:
Q  126 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 209  Q
    |||||||| |||||| ||||| | ||||||||||||  |||||||||||||||||| ||| ||||| |||||| ||||| ||||    
T  1417285 tagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatct-tttgttatataaatagtttatacataa 1417203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 204
Target Start/End: Original strand, 5006484 - 5006635
Alignment:
Q  50 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 149  Q
    ||||||| || |||||||||||||||||    |||| |||||||||||| | ||| |  |||| | || || ||  |||||||| ||||||  |||||      
T  5006484 tttgtgaaagcttatggaaacaacttataacatgtctataagttgtttttaccttct--ccatgaactctccagggtagcttatgaaaacaatttatacc 5006581  T
Q  150 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 204  Q
    |||||||||||| ||||||||||||||||||| ||| |||||| ||||| |||||    
T  5006582 ttatatgaaaacagtttgactttattttatct-tttgttataggaatagcttata 5006635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 213
Target Start/End: Complemental strand, 23721528 - 23721436
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctt----ttttatagaaatagattatatataagcac 213  Q
    ||||||||| |||||| ||||||||||| |||||||  ||||||||||||| || || ||    |||||||||||||| ||||| ||||||||    
T  23721528 atagcttataaaaacaacttatagtttaaatgaaaatagtttgactttattctaactttttttattttatagaaatagtttatacataagcac 23721436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 24973957 - 24973871
Alignment:
Q  134 taaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    |||||||| ||||||| |||||| ||||  ||||| |||||||||||| ||| |||||||||||| || || |||||||| |||||||    
T  24973957 taaaacagtttatagtctatatggaaacaatttgaatttattttatct-tttgttatagaaatagcttttacataagcacttatatga 24973871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 179
Target Start/End: Original strand, 28340427 - 28340498
Alignment:
Q  108 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 179  Q
    |||||||||| || |||||||||| | |||||| ||||||  ||| |||||||| |||||||||||||||||    
T  28340427 tccataagctctccagcatagcttctgaaaacaacttataacttacatgaaaacagtttgactttattttat 28340498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 29363559 - 29363484
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||||| || || ||| ||||| | |||||||||||  | |||||||||| |||||||||||||||||||    
T  29363559 tttccataagctctccaggataacttatgataacagcttataactaatatgaaaacagtttgactttattttatct 29363484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 212
Target Start/End: Original strand, 3500940 - 3501100
Alignment:
Q  50 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 149  Q
    |||||||||| ||||||||| ||||||||   |||  || || |||||| | ||| |||||||| ||||  ||| |||| | || || ||| |||||| |    
T  3500940 tttgtgagagcttatggaaataacttatgacatgtacatcagctgttttcagcttatttccatacgctta-taggatagttaatgaatacaacttatatt 3501038  T
Q  150 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagca 212  Q
    ||||||||||| | |||||||||||||||||| ||| ||||| || ||| ||||| |||||||    
T  3501039 ttatatgaaaatgatttgactttattttatct-tttattatataattagcttatacataagca 3501100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 5369739 - 5369789
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttatt 175  Q
    ||||||||| ||||||||||||||  ||||||||||| |||||||||||||    
T  5369739 atagcttatgaaaacagcttatagcatatatgaaaacagtttgactttatt 5369789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 10190836 - 10190766
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 176  Q
    ||||||||||||||  || |||| |||| ||||||  ||| ||||||||||||||| ||||||||||||||    
T  10190836 tttccataagcttttaagaatagtttatgaaaacaatttacagtttatatgaaaacagtttgactttattt 10190766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 27378838 - 27378962
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 186  Q
    |||||||||||| |  || ||| |||||||| || || |||| |||| ||||||| || |||||||||||||||| |||  ||||||||||| || |||     
T  27378838 ataagttgttttcagtttattttcataagctctccaggatagtttatgaaaacagattgtagtttatatgaaaacagttctactttatttta-ct-tttg 27378935  T
Q  187 ttatagaaatagattatatataagcac 213  Q
    | |||||||||| ||||| ||||||||    
T  27378936 taatagaaatagcttatacataagcac 27378962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 28165151 - 28165026
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 186  Q
    ||||| |||||| | ||| |||||||||||| || |  ||||||||| || |||| |||||| |||||| |||||  |||||||| ||||||||| |||     
T  28165151 ataagctgttttcaacttatttccataagctctccatgatagcttataaagacagtttatagcttatattaaaacaatttgacttcattttatct-tttg 28165053  T
Q  187 ttatagaaatagattatatataagcac 213  Q
    ||||||||| |  ||||| ||||||||    
T  28165052 ttatagaaagaacttatacataagcac 28165026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 31002781 - 31002727
Alignment:
Q  127 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||| |||||||||||||| |||||||||||   ||||||||||||||||||    
T  31002781 agcttatcaaaacagcttatagcttatatgaaaatattttgactttattttatct 31002727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 160
Target Start/End: Original strand, 33645939 - 33646044
Alignment:
Q  55 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatag-tttat 153  Q
    ||||| ||||||||||||||||||   |||| |||||||||||| |  || |||||||||||| || || ||||||||| ||||||| |||||| || ||    
T  33645939 gagagcttatggaaacaacttatgacatgtctataagttgtttttaggttatttccataagctctccag-atagcttatgaaaacagtttatagcttaat 33646037  T
Q  154 atgaaaa 160  Q
    |||||||    
T  33646038 atgaaaa 33646044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 176
Target Start/End: Complemental strand, 44822024 - 44821930
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 176  Q
    ||||||||||||||||| | ||| ||| |||||| | || || ||||||||| |||||||||||||  |||||  |||||  |||||||||||||    
T  44822024 tgtcaataagttgttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttatacaaaaacaatttgactttattt 44821930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 45777229 - 45777275
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||||    
T  45777229 aaaacaacttatagtttatatgaaaacagtttgacttaattttatct 45777275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 45813238 - 45813315
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    |||||| ||||||| ||||||||||||   ||||||||||||||||| |||  ||||||||||| ||||| ||||||||    
T  45813238 aaaacaacttatagattatatgaaaacaagttgactttattttatct-tttggtatagaaatagcttataaataagcac 45813315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 2048075 - 2048172
Alignment:
Q  110 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 209  Q
    |||||||||||||| |||||||||  ||| ||||||||| |||| ||||| | ||||||||||| ||||  |||||| || |||||||| ||||| ||||    
T  2048075 cataagctttctag-atagcttatgtaaaaagcttatagcttatctgaaatcagtttgactttaattta--tcttttgtaaagaaatagcttatacataa 2048171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 27548285 - 27548193
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatata 218  Q
    ||||||||| |||||||||||||| ||| ||||||||  || ||||||||||||||| |||  ||  ||||||| ||||| |||||||| ||||    
T  27548285 atagcttatgaaaacagcttatagcttaaatgaaaacaattagactttattttatct-tttgctaaggaaatagcttatagataagcacttata 27548193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 45593792 - 45593872
Alignment:
Q  150 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactta 231  Q
    |||||||||||| ||||||||||||||||| | ||| ||| |||||||| ||||| |||||||  ||||||| |||| ||||    
T  45593792 ttatatgaaaacagtttgactttattttatgt-tttgttacagaaatagcttatacataagcatttatatgataaactctta 45593872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 194
Target Start/End: Complemental strand, 46825120 - 46825052
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaa 194  Q
    ||||||||| ||||| | |||| | ||||||||||||  |||||||||||||||||| ||||||||||||    
T  46825120 atagcttatgaaaacggtttatggcttatatgaaaacaatttgactttattttatct-ttttttatagaa 46825052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 2727409 - 2727480
Alignment:
Q  126 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 198  Q
    |||||||| ||||||  |||||||| |||||||||  ||||| ||||||||||||| ||| ||||||||||||    
T  2727409 tagcttataaaaacaatttatagttgatatgaaaagagtttgcctttattttatct-tttgttatagaaatag 2727480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 3241435 - 3241368
Alignment:
Q  153 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||||| ||||||||||||||| | | ||| |||||||||||| || ||||||||||| |||||||    
T  3241435 tatgaaaacagtttgactttattttttat-tttgttatagaaatagcttctatataagcacttatatga 3241368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 7244696 - 7244629
Alignment:
Q  153 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||||| |||||||||| |||||||| |||  ||||||||||| ||||| |||||||| |||||||    
T  7244696 tatgaaaacagtttgactttcttttatct-tttgatatagaaatagcttatacataagcacttatatga 7244629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 12110382 - 12110326
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||| |||||||||||||| |||||  |||||  ||||||||||||||||||    
T  12110382 atagcttatgaaaacagcttatagcttataccaaaacaatttgactttattttatct 12110326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 33709466 - 33709382
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    ||||| ||||||| |||||| ||||||||| |  |||||| |||||||||||| ||| ||| || ||||| ||||| ||||||||    
T  33709466 cttatgaaaacagtttatagcttatatgaagatagtttgattttattttatctttttattaaagcaatagtttatacataagcac 33709382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 218
Target Start/End: Complemental strand, 46082129 - 46081963
Alignment:
Q  54 tgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagctt--attaaaacagcttatagttt 151  Q
    |||||| ||||| ||||||||||||   || | |||||||||||| | ||| ||| |||||||| || || ||||| |  || |||||| ||||||  ||    
T  46082129 tgagagcttatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataagctctccagaatagcgtctatgaaaacaacttataactt 46082030  T
Q  152 atatgaaaacggttt-gactttattttatctcttttttatagaaatagattatatataagcacatata 218  Q
    |||||||||| |||| |||||| ||||| || ||  |||||||||||| |||||||||| ||| ||||    
T  46082029 atatgaaaacagttttgactttgttttaact-ttcgttatagaaatagcttatatataatcacttata 46081963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 46281119 - 46281211
Alignment:
Q  56 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatag 148  Q
    |||||||| |||||||||||||||  |||| |||| ||||||| | ||| |||  ||||||  || || ||||||||| ||||||||||||||    
T  46281119 agagtttacggaaacaacttatgccatgtctataaattgttttcagcttatttatataagccctccagaatagcttataaaaacagcttatag 46281211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 181
Target Start/End: Complemental strand, 3468727 - 3468580
Alignment:
Q  34 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 133  Q
    ||||||| ||||  |||||  |||||||  ||||||||||| |||   |||| |||||||||||  | ||| |||||| ||| | ||||| |||| ||||    
T  3468727 aacacttttgagactgtttcggagagttgttggaaacaactaatgacatgtccataagttgtttccaacttatttccacaagttctctaggatagattat 3468628  T
Q  134 taaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
     |||| ||||||||  ||||| |||||  ||||||||| |||||||||    
T  3468627 gaaaaaagcttataacttatacgaaaatagtttgacttcattttatct 3468580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 35536114 - 35536044
Alignment:
Q  140 agcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 211  Q
    ||||||||  ||||||||||||  |||||||||||||||||| | | |||||||||||| ||||| ||||||    
T  35536114 agcttataacttatatgaaaacaatttgactttattttatct-tatgttatagaaatagcttatacataagc 35536044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 40688996 - 40689106
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 186  Q
    ||||| |||||| | ||| ||| |||||| | || || ||||||||| || ||||||||||| |||||||||||   ||| |||||||||||||| |||     
T  40688996 ataagctgttttgagcttattttcataagttatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttatct-tttg 40689094  T
Q  187 ttatagaaatag 198  Q
     |||||||||||    
T  40689095 ctatagaaatag 40689106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 44151485 - 44151584
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||| ||||| |||||| | ||| ||||||||||||||  |  |||| |||| |||||| ||||||| ||||||| |||| |||| |||||||| |||||    
T  44151485 tgtccataagatgttttcagcttatttccataagcttttcaagatagtttatgaaaacaacttatagcttatatggaaacagttttactttattctatct 44151584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 5276216 - 5276159
Alignment:
Q  155 tgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    |||||||||||||||||||| |||||| ||| ||||| |||||| ||||| ||||||||    
T  5276216 tgaaaacggtttgactttatgttatct-tttgttataaaaatagcttatacataagcac 5276159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 145
Target Start/End: Original strand, 9423576 - 9423662
Alignment:
Q  59 gtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagctta 145  Q
    |||||||||||||| |||||   |||  |||||||||||| | ||| |||| | ||||| || || |||||||||||||||||||||    
T  9423576 gtttatggaaacaatttatgacatgttcataagttgttttcagcttatttcaagaagctctccaggatagcttattaaaacagctta 9423662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 15328600 - 15328535
Alignment:
Q  153 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatat 219  Q
    |||| ||||| ||| |||||||||||||| ||| |||||||||||||||||  |||||||| |||||    
T  15328600 tatgtaaacgatttaactttattttatct-tttattatagaaatagattatgcataagcacttatat 15328535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 42656498 - 42656453
Alignment:
Q  164 tttgactttattttatctcttttttatagaaatagattatatataag 210  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||||    
T  42656498 tttgactttattttatct-tttgttatagaaatagcttatatataag 42656453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 2999181 - 2999141
Alignment:
Q  157 aaaacggtttgactttattttatctcttttttatagaaatag 198  Q
    ||||||||||||||||||||||||| ||| ||||||||||||    
T  2999181 aaaacggtttgactttattttatct-tttgttatagaaatag 2999141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 213
Target Start/End: Complemental strand, 7274482 - 7274396
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    ||||||||| |||| |||| ||||  || |||||||| ||||  |||||||||||||  || || ||||||||| ||||||||||||||    
T  7274482 atagcttatgaaaatagctgatagcatacatgaaaacagtttacctttattttatct--ttgttgtagaaatagtttatatataagcac 7274396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 24975906 - 24975810
Alignment:
Q  145 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataagcg 242  Q
    |||| |||||| ||||| ||| | ||||||||||||| ||| |||||||| ||||||||| || ||||| ||||||| || ||| ||| ||| |||||    
T  24975906 atagcttatataaaaacagttcgcctttattttatct-tttgttatagaagtagattatacatcagcacttatatgataagcacatatgctacaagcg 24975810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 25507385 - 25507336
Alignment:
Q  111 ataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 160  Q
    ||||||||||||| ||| ||||| |||||| ||||||| |||||||||||    
T  25507385 ataagctttctagaataacttatgaaaacaacttatagcttatatgaaaa 25507336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 212
Target Start/End: Original strand, 37064230 - 37064357
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagct--tattaaaacagctt-atagtttatatgaaaacggtttgactttattttatctct 183  Q
    ||||||||||||||  || ||| |||||||| ||||  ||||||  ||| |||||| ||| | |||||||||||||||  || ||||||||||| | | |    
T  37064230 ataagttgttttaagtttattttcataagctctctatgatagcttatatgaaaacaacttaagagtttatatgaaaacaattcgactttattttttgt-t 37064328  T
Q  184 tttttatagaaatagattatatataagca 212  Q
    |||||| |||||||| ||| |||||||||    
T  37064329 tttttacagaaatagtttagatataagca 37064357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 5373237 - 5373142
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactta 231  Q
    |||||| ||||||  |||||| |||| | || ||||||||||||||| ||| ||||||||||||  |||| |||||||| || |||| || ||||||    
T  5373237 aaaacaacttataacttatataaaaatgtttggactttattttatct-tttgttatagaaatagcatatacataagcacttacatgataagcactta 5373142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 22759227 - 22759136
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 198  Q
    |||||||||||| ||  | ||||||||| ||| |||||| ||| ||||||||||||  |||  ||||||||||||| ||| ||||| ||||||    
T  22759227 tttccataagctctcctggatagcttatgaaatcagcttttagcttatatgaaaacaattttcctttattttatct-tttgttatacaaatag 22759136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 27492817 - 27492722
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||||| |||||| |||||   |||||||||||  |||||| ||||||| | || ||| |||||||||||| ||||| ||||| || |||||||    
T  27492817 atagcttatgaaaacatcttattacttatatgaaaaaagtttgattttatttgaact-tttgttatagaaatagtttatacataagaacttatatga 27492722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 36538021 - 36537977
Alignment:
Q  34 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatg 78  Q
    |||||||||||| ||||||| ||||  ||||||||||||||||||    
T  36538021 aacacttgtgagattgtttgagagaacttatggaaacaacttatg 36537977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 181
Target Start/End: Original strand, 44178999 - 44179027
Alignment:
Q  153 tatgaaaacggtttgactttattttatct 181  Q
    |||||||||||||||||||||||||||||    
T  44178999 tatgaaaacggtttgactttattttatct 44179027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 48 - 242
Target Start/End: Complemental strand, 27675 - 27482
Alignment:
Q  48 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 147  Q
    |||||| ||||| ||||||||| | ||||||   || | |||||||||||| | ||| |||||| | |||| | |  |||| |||| |||||| ||||||    
T  27675 tgtttgggagagcttatggaaatagcttatgacatggctataagttgttttcagcttatttccacacgcttaccaagatagtttatgaaaacaacttata 27576  T
Q  148 gtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataagcg 242  Q
    ||||||||||||||  |||||||||||||||||| | | |||||||||||  ||||| |||||||| || |||| ||   ||||| |||||||||    
T  27575 gtttatatgaaaacaatttgactttattttatct-tctgttatagaaataacttatacataagcacttacatgataagagcttatgctataagcg 27482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 15361753 - 15361646
Alignment:
Q  107 ttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc-tcttttttatagaaatagattatat 205  Q
    |||||||| || || || ||| ||||| |||||||||||||| |||||||||||   |||||||||| |||||| ||||| |||||||||||| ||| |     
T  15361753 ttccataaactctcaagaatatcttatgaaaacagcttatagcttatatgaaaataatttgactttactttatcttctttgttatagaaatagtttacac 15361654  T
Q  206 ataagcac 213  Q
    ||||||||    
T  15361653 ataagcac 15361646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 198
Target Start/End: Original strand, 30259465 - 30259607
Alignment:
Q  56 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagctt-attaaaacagcttatagtttata 154  Q
    |||| |||| ||||||||||| |   ||||||||| ||||||| | ||| |||||||||||| || |  ||||||| ||  ||||||||||||| |||||    
T  30259465 agagcttatagaaacaacttacgacatgtcaataaattgttttcaacttatttccataagctctccatgatagctttatgcaaacagcttatagcttata 30259564  T
Q  155 tgaaaacggtttgactttattttatctcttttttatagaaatag 198  Q
    | ||| | ||||||||||||||||| | ||| ||||||||||||    
T  30259565 tcaaagcagtttgactttattttatat-tttgttatagaaatag 30259607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 39347972 - 39348071
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||| |||||||||||| | ||| ||||||||||||||  || |||| |||| |||||| ||||||| || ||||| || |||| |||||||||||||||    
T  39347972 tgtccataagttgttttcagcttatttccataagctttgcaggatagtttatgaaaacaacttatagcttgtatgagaatggttggactttattttatct 39348071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 49517091 - 49517021
Alignment:
Q  126 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 197  Q
    |||||||| |||||||||||||| ||| ||||||||  |||||||||||||||||| ||| |||||||||||    
T  49517091 tagcttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatct-tttgttatagaaata 49517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 52013956 - 52013833
Alignment:
Q  89 aagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttttt 188  Q
    |||||||||| | ||| |||||||||||  ||||| ||||||||  ||||||| || ||  |||||||||||| || || |||| || ||||| || |||    
T  52013956 aagttgtttttaacttatttccataagcactctaggatagcttacgaaaacaggttttaccttatatgaaaacagtatgtctttgttatatcttttcttt 52013857  T
Q  189 atagaaatagattatatataagca 212  Q
    |||||||||| ||||| |||||||    
T  52013856 atagaaatagcttatacataagca 52013833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 10199418 - 10199512
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||||| | ||| ||| |||||||| ||||  ||||||||| |||| ||||||| | ||||| |||||  |||||||||||||||||||    
T  10199418 ataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaaaagcttatcgattatacgaaaatagtttgactttattttatct 10199512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 210
Target Start/End: Complemental strand, 17420294 - 17420141
Alignment:
Q  56 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatat 155  Q
    |||| ||||| |||||||||||    |||| |||| ||||||| | ||| ||||||| || |||||   ||||||||  ||||||| |||||| ||||||    
T  17420294 agagcttatgaaaacaacttattacatgtccataaattgttttcaacttatttccattagttttctgagatagcttacgaaaacagtttatagcttatat 17420195  T
Q  156 gaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 210  Q
    |||||  ||| ||||||||||||||| ||| ||||| |||||| ||||| |||||    
T  17420194 gaaaattgttcgactttattttatct-tttcttataaaaatagtttatacataag 17420141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 33527199 - 33527272
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 203  Q
    ||||| |||||||||||||| |||||||||||| |||||||| |||||||||| ||| || ||||||||| ||||    
T  33527199 cttatgaaaacagcttatagattatatgaaaacagtttgactgtattttatct-tttgttttagaaatagcttat 33527272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 7218122 - 7218202
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatata 206  Q
    |||| |||| |||||| ||||||| ||||||||||||  ||||||||||||||| || ||| |||| |||||||||||||||    
T  7218122 ataggttatgaaaacaacttatagcttatatgaaaacaatttgactttattttacct-tttattatggaaatagattatata 7218202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 181
Target Start/End: Complemental strand, 15581365 - 15581220
Alignment:
Q  36 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 135  Q
    |||||||||| |||||||  |||| | ||||||||||||||||   |||| ||||| |||||| | | | |||| ||||||  ||||||||| ||||| |    
T  15581365 cacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtctataagctgttttcagcctatttctataagccctctagcataccttataa 15581266  T
Q  136 aaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||| ||||||||| |||||| ||||    || ||||||||||||||    
T  15581265 aaaaagcttatagcttatataaaaatatattaactttattttatct 15581220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 4363680 - 4363774
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||||| |||| || |||||| |||||||||||| ||||||| |||||| |||| ||| ||||| ||||||| |||| |||||||| |||||||    
T  4363680 atagcttatgaaaataggttatagcttatatgaaaacagtttgacattatttaatct-tttgttata-aaatagagtatacataagcacttatatga 4363774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 8130481 - 8130409
Alignment:
Q  102 cttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttat 174  Q
    |||||||||||||| |||| |  ||||||||| |||||| ||||||| |||| ||||||| ||||||||||||    
T  8130481 cttgtttccataagttttccatgatagcttatgaaaacaacttatagcttatgtgaaaacagtttgactttat 8130409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 48830124 - 48830180
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||| ||||||| |||||| |||||||||||  |||||||||||||||||||    
T  48830124 atagcttatgaaaacagtttatagcttatatgaaaatagtttgactttattttatct 48830180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 4868510 - 4868428
Alignment:
Q  36 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagcttt 119  Q
    ||||||||||  |||||| ||||||||||| ||||||||||||   ||||||||||||||||| | ||| ||| ||||||||||    
T  4868510 cacttgtgagactgtttgagagagtttatg-aaacaacttatgacatgtcaataagttgttttcaacttatttacataagcttt 4868428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 12477292 - 12477391
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||| |||||||||||| | ||| ||||||||  || || |  |||||||||||||| ||| ||||  ||| |||||||| |||||||||||||||||||    
T  12477292 tgtccataagttgttttcagcttatttccatacactctccatgatagcttattaaaaaagcatatatcttacatgaaaacagtttgactttattttatct 12477391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 15360899 - 15360845
Alignment:
Q  142 cttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 197  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  15360899 cttatagcttatatgaaaacagtttgactttattttatct-tttgttatagaaata 15360845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 17269307 - 17269177
Alignment:
Q  90 agttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttttta 189  Q
    ||||||||| | ||| || || |||||| || || ||||||||| |||||| ||||| | ||||||||||||  ||||||||||||||  || ||| ||     
T  17269307 agttgtttttaacttattaccgtaagctctccaggatagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttcact-tttgttc 17269209  T
Q  190 tagaaatagattatatataagcacatatatga 221  Q
    ||||||||  ||||| |||||||| |||||||    
T  17269208 tagaaataacttatacataagcacttatatga 17269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 25479638 - 25479547
Alignment:
Q  90 agttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||| | ||| ||| |||||||| ||||| ||||||||| |||||| |||||||  |||||||| ||  |||||| |||||||||||    
T  25479638 agttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagcctatatgaagacaatttgacgttattttatct 25479547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 33723398 - 33723508
Alignment:
Q  93 tgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatag 192  Q
    |||||| | ||| ||||||||||||||  ||  |||||||| ||||||| | |||||||||||||||||  ||||||||||| |||| |  || ||||||    
T  33723398 tgttttcagcttatttccataagctttacagggtagcttatgaaaacagttcatagtttatatgaaaacaatttgactttatgttat-tgattcttatag 33723496  T
Q  193 aaatagattata 204  Q
    |||||| |||||    
T  33723497 aaatagcttata 33723508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 5941505 - 5941582
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||||  | | ||||  |||||| ||||||||||||||    
T  5941505 aaaacggctcatagtttatatgaaaacagtttgactttattttatc-atctgttatcaaaatagcttatatataagcac 5941582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 180
Target Start/End: Complemental strand, 21012855 - 21012757
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc 180  Q
    |||| ||||| |||||| | ||||||| | |||||||||||| ||| ||||| |||||| |||||||  || |||||||| | | ||||||||||||||    
T  21012855 tgtcgataagatgttttcagcttgttttcgtaagctttctaggataacttatcaaaacatcttatagcataaatgaaaacagatcgactttattttatc 21012757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 35017641 - 35017540
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaac--ggtttgactttattttat 179  Q
    |||| ||||||| |||| | ||| |||||||||||| || || | ||||||| |||||||| ||||| ||||| ||||||   |||||||||||||||||    
T  35017641 tgtccataagttattttcaacttatttccataagctctccaggacagcttatgaaaacagcatatagattatacgaaaacagtgtttgactttattttat 35017542  T
Q  180 ct 181  Q
    ||    
T  35017541 ct 35017540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 44422736 - 44422666
Alignment:
Q  110 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc 180  Q
    |||||||| || || ||||||||| |||| ||||||||| |||||||||||| ||||||  ||||||||||    
T  44422736 cataagctctccaggatagcttataaaaatagcttatagcttatatgaaaacagtttgagattattttatc 44422666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 48282118 - 48282060
Alignment:
Q  163 gtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    ||||||||||||||||||| | |||||||||||||| || || |||||||| |||||||    
T  48282118 gtttgactttattttatctttcttttatagaaatagcttttacataagcacttatatga 48282060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 3319992 - 3320069
Alignment:
Q  137 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcaca 214  Q
    |||| |||||||||||||||||| | |||  |||||||||||||| ||||||||| ||||   ||||| |||||||||    
T  3319992 aacaacttatagtttatatgaaaccagttctactttattttatcttttttttatataaatttcttatacataagcaca 3320069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 15565879 - 15565936
Alignment:
Q  124 catagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||  ||||||||||||||||||||  ||||  |||||||||||||||||||    
T  15565879 catagcttaagaaaacagcttatagtttatacaaaaatagtttgactttattttatct 15565936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 17631149 - 17631221
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 198  Q
    ||||||||| | ||||||| | |||||| |||||||| ||| ||||||||||||||| ||| ||||||||||||    
T  17631149 atagcttatgagaacagctcaaagtttacatgaaaacagttagactttattttatct-tttgttatagaaatag 17631221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 25006082 - 25006135
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttta 178  Q
    ||||||||| |||||| ||||||| ||||||||||||  |||||||||||||||    
T  25006082 atagcttatgaaaacaacttatagcttatatgaaaacaatttgactttatttta 25006135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 147
Target Start/End: Complemental strand, 27140575 - 27140478
Alignment:
Q  50 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 147  Q
    |||| ||||||||| ||||||| ||||||   |||| |||||||||||| | ||| ||| |||||||| || |  ||||||||| |||||||||||||    
T  27140575 tttgagagagtttaaggaaacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 27738211 - 27738284
Alignment:
Q  108 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||| ||  | ||||||||| ||||||  |||||| ||||||||||||  ||||||||||||||||||    
T  27738211 tccataagctctcctgtatagcttatgaaaacaaattatagcttatatgaaaacaatttgactttattttatct 27738284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 182
Target Start/End: Complemental strand, 6279464 - 6279364
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||| |||||||||||| | | | |||||||||||| ||||| ||||||||| |||| || ||| || ||||| ||||||  ||||  ||||||||||||    
T  6279464 tgtccataagttgttttcagcgtatttccataagctctctaggatagcttatgaaaatagtttaaagcttatacgaaaacaatttgtttttattttatct 6279365  T
Q  182 c 182  Q
    |    
T  6279364 c 6279364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 218
Target Start/End: Complemental strand, 6981557 - 6981422
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||||||||||| | | | ||||||||| || || || ||||||||  ||| ||||||||| ||||||| |||    ||||||||| |||||| |    
T  6981557 tgtcaataagttgttttcagcatatttccataaactctccagaatagcttaggaaatcagcttataatttatatcaaacaaatttgactttgttttat-t 6981459  T
Q  182 cttttttatagaaatagattatatataagcacatata 218  Q
     ||| |||||||||||  |||||||||| ||| ||||    
T  6981458 ttttgttatagaaataatttatatataaacacttata 6981422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 17422986 - 17423070
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 209  Q
    ||||| ||| |||||| ||||||| |||||||||| | | ||||||||||||||||  ||| ||||||||| || ||||| ||||    
T  17422986 atagcatatgaaaacaacttatagcttatatgaaatcagcttgactttattttatcgttttgttatagaaaaagcttatacataa 17423070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 178
Target Start/End: Original strand, 37272639 - 37272687
Alignment:
Q  130 ttattaaaacagcttatagtttatatgaaaacggtttgactttatttta 178  Q
    |||| |||||||||||||| |||||||||||| | ||||||||||||||    
T  37272639 ttatgaaaacagcttatagcttatatgaaaacagattgactttatttta 37272687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 45107619 - 45107550
Alignment:
Q  150 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    |||||||||||  ||||||||||||||||| |  || |||||||||||| ||||| |||||||| |||||||    
T  45107619 ttatatgaaaatagtttgactttattttattt--ttcttatagaaatagcttatagataagcacttatatga 45107550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 46499941 - 46499996
Alignment:
Q  164 tttgactttattttatctcttttttatagaaatagattatatataagcacatatatg 220  Q
    |||||||||||||||||| ||| |||||||||||| ||||| |||||||| ||||||    
T  46499941 tttgactttattttatct-tttcttatagaaatagcttatagataagcacttatatg 46499996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 781192 - 781255
Alignment:
Q  150 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    |||||||||||| |||| ||||||||||| || ||| ||||||||||   ||||||||||||||    
T  781192 ttatatgaaaacagtttcactttattttacctttttattatagaaattatttatatataagcac 781255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 180
Target Start/End: Complemental strand, 4215374 - 4215339
Alignment:
Q  145 atagtttatatgaaaacggtttgactttattttatc 180  Q
    ||||||||||||||||| ||||||||||||||||||    
T  4215374 atagtttatatgaaaacagtttgactttattttatc 4215339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 5592734 - 5592797
Alignment:
Q  126 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttttta 189  Q
    |||||||| |||||| ||||||| |||||||| |||  || ||||||||||||||| |||||||    
T  5592734 tagcttatgaaaacaacttatagcttatatgacaacaattcgactttattttatctttttttta 5592797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 6265112 - 6265026
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacata 216  Q
    ||||| ||||| |||||||||| || | |||||  |||||||||||||||| | ||| |||||||| ||| ||||||| |||||||||    
T  6265112 cttatgaaaacggcttatagttaatgtaaaaacaatttgactttattttat-tttttgttatagaagtagcttatataaaagcacata 6265026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 10581125 - 10581180
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc 180  Q
    ||||||||| |||||| ||||||| ||| |||||||  ||||||||||||||||||    
T  10581125 atagcttatgaaaacaacttatagcttaaatgaaaaaagtttgactttattttatc 10581180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 17628611 - 17628549
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 198  Q
    ||||||||||||| |||||||||||||  |||||||||| ||||||| |||  |||||||||||    
T  17628611 aaaacagcttataatttatatgaaaacaatttgactttactttatct-tttaatatagaaatag 17628549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 19462814 - 19462865
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 176  Q
    ||||||||| ||||||  ||| ||||||||||||||| ||||||||||||||    
T  19462814 atagcttatgaaaacaatttacagtttatatgaaaactgtttgactttattt 19462865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 23544687 - 23544773
Alignment:
Q  125 atagcttattaaaacagctta-tagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 211  Q
    ||||||||| ||||||| ||| ||| ||||||||||||  |||||||| ||||||||| ||||  |||||||||| ||||| ||||||    
T  23544687 atagcttatgaaaacagtttaatagcttatatgaaaacaatttgacttaattttatct-ttttccatagaaatagcttatacataagc 23544773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 28467337 - 28467411
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||| ||||||| |||||| |||||||| |||||| ||| ||| |||||||||||   ||||||||||||||||||    
T  28467337 tttcaataagctctctagc-tagcttatgaaaacaacttgtagcttatatgaaaataatttgactttattttatct 28467411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 186
Target Start/End: Complemental strand, 30257743 - 30257644
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 186  Q
    ||||| |||||| | ||| |||| ||||||  || || |||| |||| |||||| |||| || ||||||| |||| ||||||||||||||||||| ||||    
T  30257743 ataagctgttttcagcttatttctataagccctccaggatagtttatgaaaacaacttaaagcttatatggaaacagtttgactttattttatctttttt 30257644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 34179881 - 34179976
Alignment:
Q  86 aataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||||||| | | | ||||||||| ||||  || |||| |||| ||||||| |||||| ||| || |||||  ||||||||||||||||||    
T  34179881 aataagttgttttcagcgtatttccataaacttttcaggatagtttatgaaaacagtttatagcttagattaaaacaatttgactttattttatct 34179976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 240
Target Start/End: Original strand, 40304087 - 40304216
Alignment:
Q  109 ccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatata 208  Q
    |||||| || ||||| |||| |||| |||||||||||||  ||||||||||||  | ||| |||||||||||| ||| ||||| |||||| |||||  ||    
T  40304087 ccataaactatctaggatag-ttatgaaaacagcttataacttatatgaaaacaatgtgattttattttatct-tttgttatataaatagcttataccta 40304184  T
Q  209 agcacatatatgagaaacacttatcctataag 240  Q
    ||||   |||||| |||||||||  |||||||    
T  40304185 agcaataatatgataaacacttacactataag 40304216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 48748659 - 48748731
Alignment:
Q  153 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaaca 227  Q
    |||||||||  ||| ||||||||| ||||  ||| ||||||||||| ||||| |||||||||||||||| |||||    
T  48748659 tatgaaaacaatttaactttatttcatct--tttgtatagaaatagcttatacataagcacatatatgataaaca 48748731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 219
Target Start/End: Complemental strand, 4548743 - 4548649
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatat 219  Q
    ||||||||| ||||||||||||   || ||| ||||| ||||||||||||||||||| ||| ||| | ||||||  |||| || ||||| |||||    
T  4548743 atagcttatgaaaacagcttatgacttgtataaaaacagtttgactttattttatctttttgttacaaaaatagtctatacatgagcacttatat 4548649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 5756735 - 5756812
Alignment:
Q  126 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 204  Q
    |||||||  |||||| |||||| ||||||||||||| |||| ||||||| | |||| ||| |||||||||||| |||||    
T  5756735 tagcttacgaaaacaacttataatttatatgaaaacagtttaactttatatcatct-tttgttatagaaatagcttata 5756812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 181
Target Start/End: Complemental strand, 15515633 - 15515507
Alignment:
Q  55 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 154  Q
    ||||||||||| ||||||||||||   |||||||| | | |||| |  || |||||||||||| || |  ||| ||||| |||||| ||||||| |||||    
T  15515633 gagagtttatgaaaacaacttatgacatgtcaatacgctattttcaatttatttccataagctatccatgataacttatgaaaacaacttatagcttata 15515534  T
Q  155 tgaaaacggtttgactttattttatct 181  Q
     ||||||  ||||| |||||| |||||    
T  15515533 cgaaaacattttgattttattctatct 15515507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 16322909 - 16322815
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    |||||||||||| | ||| |||||||||||| |  |  ||||| ||| |||||||||||||  || ||||||||  |||||||| ||||||||||    
T  16322909 ataagttgtttttagcttatttccataagctcttcaaaatagcctatgaaaacagcttataacttctatgaaaatagtttgactatattttatct 16322815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 25005815 - 25005881
Alignment:
Q  95 ttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaac 161  Q
    |||||| |||||||  ||||||| || || ||||||||| |||||| ||||||| ||||||||||||    
T  25005815 ttttaagcttgtttttataagctctccaggatagcttatgaaaacaacttatagcttatatgaaaac 25005881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 204
Target Start/End: Original strand, 28689440 - 28689580
Alignment:
Q  65 ggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagct--tattaaaacagcttatagtttatatgaaaacg 162  Q
    ||||||| ||||||   |||| |||||||||||| | ||| ||| ||||||||||| |  ||||||  ||| |||||| ||||||| ||||||||||||     
T  28689440 ggaaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttatatgaaaacc 28689539  T
Q  163 gtttgactttattttatctcttttttatagaaatagattata 204  Q
      |||  |||||||||||| |||  ||||||||||| |||||    
T  28689540 acttgcatttattttatct-tttgatatagaaatagtttata 28689580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 29415642 - 29415684
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactt 171  Q
    ||||| |||||||||||||||||| || |||||||||||||||    
T  29415642 cttatgaaaacagcttatagtttacataaaaacggtttgactt 29415684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 45999354 - 45999423
Alignment:
Q  143 ttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    |||||| |||||||||| | |||||||||||| |||||| ||| |||||||||||| ||||| || |||||    
T  45999354 ttatagcttatatgaaagcagtttgactttatcttatct-tttgttatagaaatagcttatacatgagcac 45999423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 198
Target Start/End: Complemental strand, 3924710 - 3924574
Alignment:
Q  61 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 160  Q
    ||||| |||||| ||||| | |||  ||||||||||||   ||| ||||||||| || |  || ||||||||| |||||| || |||| ||||| |||||    
T  3924710 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactcttcaggatagcttataaaaacaactaatagattatacgaaaa 3924611  T
Q  161 cggtttgactttattttatctcttttttatagaaatag 198  Q
    | ||||| ||| ||||||||| | | ||||||||||||    
T  3924610 cagtttgccttgattttatct-tgtgttatagaaatag 3924574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 6659579 - 6659502
Alignment:
Q  82 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 159  Q
    |||| |||||||||||| | ||| |||| ||||||| ||| |  |||||||| |||||| ||||||| ||||||||||    
T  6659579 tgtccataagttgttttcagcttatttcgataagctctcttggttagcttatgaaaacatcttatagcttatatgaaa 6659502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 196
Target Start/End: Original strand, 12564505 - 12564616
Alignment:
Q  83 gtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctc 182  Q
    |||||||||||||||| | ||| |||||||||| | || |  ||||||||| |||||| | ||||  || |||| ||||||||||||||||  ||||||     
T  12564505 gtcaataagttgttttcagcttatttccataagttctccaagatagcttatgaaaacaacctataccttgtatg-aaacggtttgactttaggttatct- 12564602  T
Q  183 ttttttatagaaat 196  Q
    ||| ||||||||||    
T  12564603 tttgttatagaaat 12564616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 23902077 - 23902150
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 160  Q
    |||||||||||| | |||  ||||||||||| ||||  ||||||| | |||||| ||||||| |||||||||||    
T  23902077 ataagttgttttcagcttacttccataagctctctaagatagcttttgaaaacaacttatagcttatatgaaaa 23902150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 29666367 - 29666473
Alignment:
Q  135 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatata--taagcacatatatgagaaacacttat 232  Q
    |||||||||||||||||||||||||||  | | |||||||||||||| ||| |||| |||||||  ||||||  |||||||| || ||| |||| | |||    
T  29666367 aaaacagcttatagtttatatgaaaacaatat-actttattttatct-tttgttattgaaatagcgtatatatttaagcacaaatgtgataaacgcatat 29666464  T
Q  233 cctataagc 241  Q
     ||||||||    
T  29666465 gctataagc 29666473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 29793991 - 29794086
Alignment:
Q  145 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataagcg 242  Q
    |||| |||| |||||||  |||||||| ||||||||| ||| ||| | ||||||  |||| |||| ||||||||||| |||||||||| |||||||||    
T  29793991 atagcttatttgaaaacaatttgactt-attttatct-tttgttacaaaaatagcctatacataaacacatatatgaaaaacacttatgctataagcg 29794086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 47877129 - 47877088
Alignment:
Q  140 agcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||||||||||||||||  ||||| ||||||||||||    
T  47877129 agcttatagtttatatgaaaacaatttgattttattttatct 47877088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 51929804 - 51929845
Alignment:
Q  106 tttccataagctttctagcatagcttattaaaacagcttata 147  Q
    |||||||||||| ||||| ||||||||| |||||||||||||    
T  51929804 tttccataagctctctagaatagcttatgaaaacagcttata 51929845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 10586420 - 10586476
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||| ||||  |||||||||| ||||||||||  ||| ||||||||||||||    
T  10586420 atagcttatgaaaatggcttatagttcatatgaaaacaattttactttattttatct 10586476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 21516391 - 21516312
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 209  Q
    ||||| |||| | ||| ||||||||||||||||  |||||||| ||||||||| ||| ||||| |||||| ||||| ||||    
T  21516391 cttatgaaaataacttctagtttatatgaaaactatttgacttcattttatct-tttcttataaaaatagtttataaataa 21516312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 28788605 - 28788641
Alignment:
Q  144 tatagtttatatgaaaacggtttgactttattttatc 180  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  28788605 tatagcttatatgaaaacagtttgactttattttatc 28788641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 30371166 - 30371114
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||| |||||| ||||||| ||||||||||||  ||||| ||||||||||||    
T  30371166 cttatgaaaacaacttatagcttatatgaaaacaatttgagtttattttatct 30371114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 35080143 - 35080202
Alignment:
Q  150 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 210  Q
    ||||||| |||| ||||||||||||||||| | ||| |||||||||| | |||||||||||    
T  35080143 ttatatggaaacagtttgactttattttat-tttttgttatagaaattgcttatatataag 35080202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 45205090 - 45205034
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 181  Q
    ||||||||| |||||| ||| ||| ||||||| |||  |||||||||||||||||||    
T  45205090 atagcttatgaaaacaacttctagcttatatggaaatagtttgactttattttatct 45205034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 45804275 - 45804212
Alignment:
Q  149 tttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    ||||||||||||  ||||||||||||||||| | ||| |||||||||||  || |||||||||||    
T  45804275 tttatatgaaaatagtttgactttattttat-tatttattatagaaataacttttatataagcac 45804212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 1147 - 1217
Alignment:
Q  150 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    |||||||| ||  ||||||||||||||||||| ||| |||||||||||| ||||| |||||||| |||||||    
T  1147 ttatatgagaatagtttgactttattttatct-tttgttatagaaatagcttatacataagcacttatatga 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 244
Target Start/End: Original strand, 9823 - 9941
Alignment:
Q  125 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaa 224  Q
    |||| |||| |||||| | ||||  ||||||||||||  |||||||| ||||||| | ||| |||||||||||  ||||| |||||||| ||||||| ||    
T  9823 atagattatgaaaacaacctataacttatatgaaaactttttgacttaattttattt-tttgttatagaaataacttatacataagcacctatatgataa 9921  T
Q  225 acacttatcctataagcgat 244  Q
     || |||| |||||||||||    
T  9922 gcatttattctataagcgat 9941  T

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Target: scaffold0275 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 2828 - 2758
Alignment:
Q  150 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 221  Q
    |||||||| ||  ||||||||||||||||||| ||| |||||||||||| ||||| |||||||| |||||||    
T  2828 ttatatgagaatagtttgactttattttatct-tttgttatagaaatagcttatacataagcacttatatga 2758  T

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Target: scaffold0053 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 20197 - 20114
Alignment:
Q  129 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 213  Q
    ||||| |||||| || |||| |||||||| ||| ||||||||||||||||||| ||  ||||||||||||  |||| ||||||||    
T  20197 cttatgaaaacaactaatagcttatatgataactgtttgactttattttatct-ttggttatagaaatagtatatacataagcac 20114  T

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Target: scaffold0147 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 147
Target Start/End: Original strand, 12678 - 12775
Alignment:
Q  51 ttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatt-aaaacagcttata 147  Q
    ||||||||  ||||||||||||||||||   |||| |||||||||||| | |||   |||||||||| ||||  ||||||| || |||||||||||||    
T  12678 ttgtgagaccttatggaaacaacttatgacatgtccataagttgttttcagcttagctccataagctctctaagatagcttcttgaaaacagcttata 12775  T

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Target: scaffold0584 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0584
Description:

Target: scaffold0584; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 1343 - 1414
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 159  Q
    |||||||||||| ||||| ||| ||||||| ||| || ||||||  |||||| ||||||||| ||||||||||    
T  1343 ataagttgtttttatcttattttcataagc-ttccaggatagctagttaaaatagcttatagcttatatgaaa 1414  T

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Target: scaffold0446 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0446
Description:

Target: scaffold0446; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 5469 - 5540
Alignment:
Q  87 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 159  Q
    |||||||||||| ||||| ||| ||||||| ||| || ||||||  |||||| ||||||||| ||||||||||    
T  5469 ataagttgtttttatcttattttcataagc-ttccaggatagctagttaaaatagcttatagcttatatgaaa 5540  T

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Target: scaffold0072 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 4969 - 4878
Alignment:
Q  150 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataagcg 242  Q
    ||||||| |||| |||||| ||| |||||| | || || |||||||||| ||||||||| |||| ||||||| | ||| |||| |||||||||    
T  4969 ttatatggaaacagtttgaatttgttttatatattatt-atagaaatagcttatatataggcacttatatgatagacatttatgctataagcg 4878  T

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