View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7836_low_19 (Length: 341)

Name: NF7836_low_19
Description: NF7836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7836_low_19
NF7836_low_19
[»] chr7 (48 HSPs)
chr7 (49-241)||(9623168-9623361)
chr7 (50-214)||(42515533-42515697)
chr7 (50-208)||(6719067-6719225)
chr7 (50-198)||(2941750-2941899)
chr7 (50-198)||(9124963-9125112)
chr7 (50-198)||(42515096-42515245)
chr7 (50-196)||(13125129-13125276)
chr7 (50-198)||(28495858-28496007)
chr7 (50-208)||(2193251-2193409)
chr7 (54-198)||(11517386-11517530)
chr7 (50-208)||(34405584-34405742)
chr7 (50-163)||(2465772-2465886)
chr7 (49-194)||(35474113-35474259)
chr7 (50-198)||(2611645-2611794)
chr7 (50-194)||(36422260-36422405)
chr7 (50-197)||(28495601-28495749)
chr7 (50-158)||(2465968-2466077)
chr7 (50-198)||(6747591-6747740)
chr7 (50-214)||(46425730-46425894)
chr7 (50-208)||(2189139-2189297)
chr7 (49-198)||(18833290-18833440)
chr7 (49-198)||(25182365-25182515)
chr7 (50-198)||(679821-679969)
chr7 (244-322)||(9623061-9623140)
chr7 (49-192)||(29357448-29357592)
chr7 (49-178)||(26421752-26421882)
chr7 (67-172)||(31743834-31743940)
chr7 (42-137)||(26421290-26421386)
chr7 (49-214)||(22529227-22529392)
chr7 (49-194)||(36015403-36015549)
chr7 (50-112)||(13122498-13122561)
chr7 (49-214)||(33316716-33316877)
chr7 (53-214)||(35527117-35527278)
chr7 (50-198)||(5406581-5406730)
chr7 (50-137)||(31406577-31406665)
chr7 (88-209)||(29039052-29039172)
chr7 (50-106)||(7646471-7646528)
chr7 (10-49)||(9625111-9625150)
chr7 (50-136)||(16192385-16192472)
chr7 (49-130)||(7461343-7461424)
chr7 (50-89)||(43776283-43776322)
chr7 (50-103)||(7646514-7646568)
chr7 (102-208)||(26957603-26957708)
chr7 (92-137)||(43233478-43233523)
chr7 (53-152)||(11372501-11372601)
chr7 (55-162)||(20966091-20966199)
chr7 (124-193)||(13124769-13124838)
chr7 (122-162)||(16811912-16811952)
[»] chr4 (57 HSPs)
chr4 (49-241)||(13613884-13614077)
chr4 (50-208)||(12691986-12692144)
chr4 (49-214)||(50398979-50399144)
chr4 (50-214)||(50398525-50398689)
chr4 (50-198)||(35871632-35871780)
chr4 (49-198)||(49998640-49998790)
chr4 (50-198)||(44471312-44471461)
chr4 (50-208)||(24629420-24629578)
chr4 (50-198)||(4127876-4128025)
chr4 (50-214)||(51331268-51331432)
chr4 (57-208)||(4127431-4127582)
chr4 (49-208)||(21220317-21220476)
chr4 (50-208)||(23942776-23942934)
chr4 (49-208)||(29628654-29628812)
chr4 (49-214)||(14351784-14351949)
chr4 (54-214)||(9423849-9424009)
chr4 (50-194)||(21067290-21067435)
chr4 (50-208)||(1645736-1645894)
chr4 (50-198)||(31817839-31817988)
chr4 (50-208)||(24628964-24629125)
chr4 (50-136)||(50814812-50814899)
chr4 (60-198)||(14572148-14572286)
chr4 (50-198)||(23350270-23350419)
chr4 (54-153)||(7678613-7678713)
chr4 (50-138)||(44470862-44470950)
chr4 (244-322)||(13614105-13614184)
chr4 (54-208)||(53996106-53996260)
chr4 (50-138)||(27026567-27026655)
chr4 (50-208)||(3169201-3169359)
chr4 (54-208)||(4185709-4185864)
chr4 (49-198)||(31817384-31817534)
chr4 (50-158)||(14571708-14571817)
chr4 (50-137)||(1464212-1464300)
chr4 (54-137)||(27029342-27029426)
chr4 (50-124)||(15306078-15306153)
chr4 (50-137)||(23943229-23943317)
chr4 (53-135)||(23091501-23091584)
chr4 (88-198)||(8467826-8467936)
chr4 (54-198)||(17029334-17029479)
chr4 (64-209)||(24271552-24271699)
chr4 (45-138)||(17628575-17628669)
chr4 (55-136)||(52048659-52048740)
chr4 (50-133)||(33764929-33765013)
chr4 (10-49)||(13612096-13612135)
chr4 (50-176)||(21067760-21067884)
chr4 (50-136)||(27578444-27578531)
chr4 (88-215)||(43928989-43929116)
chr4 (99-162)||(53391927-53391990)
chr4 (88-198)||(41869922-41870032)
chr4 (50-138)||(20306151-20306237)
chr4 (92-198)||(17028878-17028984)
chr4 (88-136)||(23976245-23976293)
chr4 (49-135)||(42838690-42838780)
chr4 (55-145)||(4186224-4186315)
chr4 (50-87)||(11828472-11828509)
chr4 (55-139)||(34554492-34554577)
chr4 (50-137)||(27578896-27578984)
[»] chr5 (41 HSPs)
chr5 (49-198)||(3886593-3886743)
chr5 (50-198)||(2473963-2474112)
chr5 (50-208)||(17445448-17445606)
chr5 (53-198)||(189072-189218)
chr5 (45-198)||(22556540-22556694)
chr5 (50-198)||(8642027-8642176)
chr5 (50-208)||(10927396-10927554)
chr5 (50-208)||(34867785-34867943)
chr5 (50-198)||(1821910-1822059)
chr5 (50-209)||(8391315-8391473)
chr5 (50-208)||(10926939-10927097)
chr5 (54-208)||(21886143-21886297)
chr5 (50-194)||(2193824-2193969)
chr5 (50-198)||(2474409-2474558)
chr5 (54-214)||(20039472-20039631)
chr5 (50-208)||(42788639-42788797)
chr5 (45-198)||(22556973-22557127)
chr5 (50-158)||(34371656-34371765)
chr5 (50-158)||(34372112-34372221)
chr5 (50-198)||(3887050-3887199)
chr5 (50-208)||(27646828-27646986)
chr5 (50-198)||(39146943-39147092)
chr5 (50-209)||(30719798-30719957)
chr5 (53-194)||(18304439-18304581)
chr5 (50-208)||(15513005-15513164)
chr5 (50-198)||(30684549-30684698)
chr5 (49-115)||(29680099-29680166)
chr5 (52-137)||(4673466-4673552)
chr5 (50-192)||(24182239-24182381)
chr5 (54-138)||(20858538-20858623)
chr5 (62-153)||(18750201-18750293)
chr5 (50-112)||(11757274-11757337)
chr5 (87-197)||(11160712-11160822)
chr5 (56-136)||(4657992-4658073)
chr5 (122-198)||(22975076-22975152)
chr5 (88-214)||(5066923-5067048)
chr5 (96-209)||(2058696-2058808)
chr5 (88-153)||(42429194-42429259)
chr5 (88-159)||(16370740-16370811)
chr5 (88-198)||(43356652-43356760)
chr5 (50-138)||(32574651-32574740)
[»] scaffold0020 (1 HSPs)
scaffold0020 (50-198)||(107456-107605)
[»] chr3 (40 HSPs)
chr3 (50-198)||(31284269-31284418)
chr3 (50-194)||(28561754-28561899)
chr3 (50-198)||(16811385-16811534)
chr3 (54-194)||(39653172-39653313)
chr3 (50-198)||(41472305-41472453)
chr3 (50-194)||(50347754-50347899)
chr3 (49-190)||(25239069-25239211)
chr3 (50-194)||(11180027-11180172)
chr3 (50-208)||(14813944-14814102)
chr3 (50-159)||(13150547-13150657)
chr3 (49-198)||(39640941-39641091)
chr3 (50-198)||(8067284-8067433)
chr3 (50-198)||(20885110-20885259)
chr3 (50-198)||(25230241-25230390)
chr3 (50-198)||(25237828-25237977)
chr3 (50-198)||(25248115-25248264)
chr3 (50-198)||(27187323-27187472)
chr3 (50-214)||(2911084-2911248)
chr3 (50-194)||(13150092-13150237)
chr3 (50-198)||(30529691-30529840)
chr3 (50-194)||(32227509-32227653)
chr3 (53-198)||(7477195-7477341)
chr3 (53-198)||(7493885-7494031)
chr3 (50-198)||(25230698-25230847)
chr3 (50-198)||(25238285-25238434)
chr3 (50-194)||(32227214-32227359)
chr3 (50-152)||(32386727-32386830)
chr3 (50-138)||(14820218-14820307)
chr3 (50-162)||(25238677-25238790)
chr3 (50-137)||(4067353-4067441)
chr3 (50-208)||(37045030-37045188)
chr3 (49-134)||(25802540-25802626)
chr3 (54-198)||(16810929-16811074)
chr3 (58-214)||(32796936-32797092)
chr3 (50-162)||(29224364-29224477)
chr3 (50-198)||(41474001-41474150)
chr3 (55-136)||(26309987-26310069)
chr3 (50-133)||(25802997-25803081)
chr3 (54-137)||(31103955-31104041)
chr3 (92-134)||(3890046-3890088)
[»] chr1 (43 HSPs)
chr1 (54-198)||(20061188-20061333)
chr1 (50-208)||(20054073-20054231)
chr1 (50-208)||(20054529-20054687)
chr1 (50-208)||(20054985-20055143)
chr1 (50-208)||(20055441-20055599)
chr1 (50-208)||(20055897-20056055)
chr1 (50-208)||(20056353-20056511)
chr1 (50-208)||(20057256-20057414)
chr1 (50-208)||(20845654-20845812)
chr1 (50-208)||(43057516-43057674)
chr1 (49-198)||(50002699-50002849)
chr1 (50-198)||(35759601-35759750)
chr1 (50-198)||(35760907-35761056)
chr1 (57-208)||(50002285-50002436)
chr1 (50-208)||(38340901-38341059)
chr1 (49-198)||(2634928-2635078)
chr1 (50-191)||(20057712-20057854)
chr1 (53-214)||(30872946-30873107)
chr1 (50-208)||(52250201-52250359)
chr1 (50-198)||(16451926-16452075)
chr1 (50-198)||(16461079-16461228)
chr1 (50-208)||(43057058-43057215)
chr1 (50-198)||(46693728-46693878)
chr1 (49-138)||(20056808-20056898)
chr1 (54-138)||(20060337-20060422)
chr1 (49-214)||(12883513-12883678)
chr1 (55-198)||(2328319-2328463)
chr1 (50-152)||(51372867-51372970)
chr1 (51-198)||(31822657-31822805)
chr1 (50-208)||(50003068-50003226)
chr1 (49-191)||(16907245-16907388)
chr1 (53-137)||(12728056-12728142)
chr1 (50-198)||(23180734-23180883)
chr1 (51-224)||(7548070-7548243)
chr1 (50-104)||(52250641-52250696)
chr1 (50-104)||(52250978-52251033)
chr1 (265-312)||(7096886-7096933)
chr1 (92-208)||(10820587-10820702)
chr1 (54-137)||(16440576-16440660)
chr1 (55-210)||(16410721-16410877)
chr1 (88-209)||(2634459-2634580)
chr1 (266-318)||(7584358-7584410)
chr1 (70-133)||(31823097-31823161)
[»] chr2 (34 HSPs)
chr2 (50-197)||(30966695-30966843)
chr2 (49-241)||(33174918-33175112)
chr2 (50-198)||(24818330-24818479)
chr2 (50-194)||(16378945-16379090)
chr2 (50-194)||(41754297-41754442)
chr2 (53-208)||(18098874-18099029)
chr2 (50-197)||(30966239-30966387)
chr2 (50-208)||(25434049-25434207)
chr2 (50-194)||(25337990-25338135)
chr2 (50-198)||(29804686-29804835)
chr2 (50-208)||(11388184-11388340)
chr2 (50-198)||(1912529-1912677)
chr2 (49-208)||(16379388-16379547)
chr2 (50-214)||(33174494-33174656)
chr2 (50-198)||(5399810-5399959)
chr2 (50-158)||(8256570-8256679)
chr2 (49-191)||(83028-83171)
chr2 (50-241)||(38898905-38899098)
chr2 (53-138)||(33771065-33771151)
chr2 (88-209)||(1953149-1953269)
chr2 (50-198)||(29259613-29259762)
chr2 (49-191)||(27882918-27883061)
chr2 (50-162)||(11394575-11394686)
chr2 (49-208)||(1707037-1707195)
chr2 (50-198)||(15619902-15620051)
chr2 (50-193)||(30963713-30963857)
chr2 (50-175)||(20502050-20502175)
chr2 (53-137)||(8073957-8074042)
chr2 (92-208)||(18447954-18448069)
chr2 (56-137)||(13191039-13191121)
chr2 (92-138)||(30963299-30963345)
chr2 (50-137)||(30961876-30961964)
chr2 (88-138)||(15639798-15639848)
chr2 (53-90)||(32377712-32377749)
[»] chr8 (40 HSPs)
chr8 (50-208)||(10844878-10845036)
chr8 (50-208)||(22026374-22026532)
chr8 (50-208)||(27925894-27926052)
chr8 (50-198)||(2044062-2044211)
chr8 (49-208)||(41659097-41659256)
chr8 (50-194)||(10844608-10844753)
chr8 (50-194)||(12827247-12827392)
chr8 (50-197)||(17103086-17103234)
chr8 (50-208)||(22548988-22549146)
chr8 (50-208)||(32292392-32292550)
chr8 (50-194)||(22548542-22548687)
chr8 (50-194)||(28453346-28453491)
chr8 (50-198)||(34308472-34308621)
chr8 (50-198)||(8080335-8080484)
chr8 (50-138)||(25144836-25144925)
chr8 (50-162)||(25147576-25147689)
chr8 (50-198)||(27022331-27022480)
chr8 (49-209)||(27819238-27819398)
chr8 (50-198)||(34308928-34309081)
chr8 (41-191)||(28375038-28375189)
chr8 (50-198)||(6464903-6465052)
chr8 (50-192)||(25147977-25148120)
chr8 (50-162)||(12100731-12100844)
chr8 (54-190)||(21316106-21316243)
chr8 (58-198)||(22840530-22840671)
chr8 (50-192)||(33852251-33852394)
chr8 (50-138)||(41913034-41913123)
chr8 (88-192)||(27021911-27022015)
chr8 (50-203)||(3745100-3745254)
chr8 (49-189)||(1297020-1297161)
chr8 (55-162)||(15819014-15819121)
chr8 (54-124)||(31283648-31283719)
chr8 (49-198)||(15567548-15567698)
chr8 (54-137)||(30527479-30527563)
chr8 (53-183)||(3744657-3744788)
chr8 (92-193)||(22705181-22705282)
chr8 (53-113)||(25307855-25307914)
chr8 (88-137)||(30334940-30334989)
chr8 (92-137)||(6466775-6466820)
chr8 (92-137)||(15568041-15568086)
[»] scaffold0018 (1 HSPs)
scaffold0018 (50-198)||(10304-10453)
[»] chr6 (42 HSPs)
chr6 (50-214)||(20896681-20896845)
chr6 (50-196)||(13492795-13492942)
chr6 (50-214)||(6330905-6331069)
chr6 (50-198)||(16519972-16520121)
chr6 (50-198)||(17027524-17027673)
chr6 (50-214)||(17850907-17851071)
chr6 (50-208)||(20850316-20850474)
chr6 (55-208)||(3652481-3652634)
chr6 (56-198)||(7911882-7912025)
chr6 (50-241)||(20126175-20126368)
chr6 (50-198)||(7912314-7912463)
chr6 (50-198)||(9352066-9352215)
chr6 (50-158)||(13191506-13191615)
chr6 (50-138)||(13492396-13492485)
chr6 (50-198)||(17731102-17731255)
chr6 (63-194)||(27334169-27334301)
chr6 (63-194)||(27394909-27395041)
chr6 (50-208)||(2681209-2681367)
chr6 (54-208)||(23986314-23986468)
chr6 (54-207)||(9440306-9440459)
chr6 (49-138)||(15929646-15929736)
chr6 (50-214)||(17851363-17851527)
chr6 (54-194)||(2720560-2720702)
chr6 (69-214)||(31821704-31821849)
chr6 (50-162)||(11062325-11062438)
chr6 (54-138)||(20735759-20735844)
chr6 (50-192)||(21311981-21312124)
chr6 (50-198)||(21311519-21311668)
chr6 (51-194)||(23776449-23776592)
chr6 (50-176)||(2890832-2890959)
chr6 (54-194)||(14771716-14771857)
chr6 (54-138)||(28583027-28583112)
chr6 (53-198)||(28065831-28065980)
chr6 (49-172)||(9440849-9440973)
chr6 (64-138)||(15929263-15929338)
chr6 (62-136)||(17205405-17205479)
chr6 (50-103)||(28780209-28780263)
chr6 (121-198)||(9440493-9440570)
chr6 (55-138)||(1991617-1991701)
chr6 (92-198)||(32292889-32292995)
chr6 (49-153)||(33774994-33775101)
chr6 (54-138)||(20732642-20732727)
[»] scaffold0499 (1 HSPs)
scaffold0499 (50-192)||(2044-2187)
[»] scaffold0322 (1 HSPs)
scaffold0322 (50-198)||(18970-19119)
[»] scaffold0047 (2 HSPs)
scaffold0047 (50-198)||(18128-18276)
scaffold0047 (50-198)||(17591-17740)
[»] scaffold0168 (1 HSPs)
scaffold0168 (50-198)||(2746-2895)
[»] scaffold0024 (1 HSPs)
scaffold0024 (50-198)||(105724-105873)
[»] scaffold0022 (4 HSPs)
scaffold0022 (50-198)||(162671-162820)
scaffold0022 (56-162)||(69814-69921)
scaffold0022 (50-106)||(163167-163224)
scaffold0022 (50-103)||(163127-163181)
[»] scaffold0243 (1 HSPs)
scaffold0243 (50-208)||(1215-1373)
[»] scaffold0040 (1 HSPs)
scaffold0040 (50-198)||(2203-2352)
[»] scaffold0333 (2 HSPs)
scaffold0333 (54-208)||(4556-4710)
scaffold0333 (50-132)||(5091-5174)
[»] scaffold0007 (1 HSPs)
scaffold0007 (88-198)||(142306-142416)
[»] scaffold0002 (1 HSPs)
scaffold0002 (50-194)||(154765-154910)
[»] scaffold0005 (2 HSPs)
scaffold0005 (60-198)||(245090-245228)
scaffold0005 (50-158)||(245559-245668)
[»] scaffold0389 (1 HSPs)
scaffold0389 (50-115)||(13526-13592)
[»] scaffold0664 (1 HSPs)
scaffold0664 (68-192)||(3993-4118)
[»] scaffold0088 (1 HSPs)
scaffold0088 (90-208)||(23668-23785)
[»] scaffold0557 (1 HSPs)
scaffold0557 (53-153)||(2154-2255)
[»] scaffold0391 (1 HSPs)
scaffold0391 (53-146)||(14797-14891)
[»] scaffold0277 (1 HSPs)
scaffold0277 (50-103)||(14695-14749)
[»] scaffold0036 (1 HSPs)
scaffold0036 (62-208)||(26064-26211)


Alignment Details
Target: chr7 (Bit Score: 144; Significance: 1e-75; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 49 - 241
Target Start/End: Complemental strand, 9623361 - 9623168
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9623361 acacgcttaactgtggagttcttatagaatgaactaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagtactccttcta 9623262  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtct--aagttgtcaggtaccactcattatcatg 241  Q
    |||||||||||||||||||||| ||||| | |||||||||||||| ||  ||||||||||| |||  ||||||||||||||||||||||||||||    
T  9623261 ccatggagtctcatgcatgcacaacctctggatccctctcattcc-attgtgattcggtttatctaaaagttgtcaggtaccactcattatcatg 9623168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 50 - 214
Target Start/End: Complemental strand, 42515697 - 42515533
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||  |||||| |    
T  42515697 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacacttcttataagccttccttcaa 42515598  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    ||||| |||||||| | | |||| |||||| ||||||||||||| |||| |||||||||| |||||    
T  42515597 ccatgtagtctcatacctacacggcctcaggatccctctcattctgatg-tgattcggttcgtcta 42515533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 6719067 - 6719225
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| |    
T  6719067 cacgcttaactctggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcattccttcaa 6719166  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | | |||  |||||| |||||||||||||| ||| ||||||||||    
T  6719167 ccatgtagtcccatacctacacagcctcaggatccctctcattccaatg-tgattcggtt 6719225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 2941750 - 2941899
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||  |||||| |    
T  2941750 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttatcagccttccttcaa 2941849  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | || ||| |||||| ||||||||||||| |||||    
T  2941850 ccatgcagtcccatacctgtacggcctcaggatccctctcattctgatgt 2941899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 9125112 - 9124963
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||  |    
T  9125112 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttcctttaa 9125013  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||  |||||||| | |||||| |||||  ||| |||||||||||||||    
T  9125012 ccatacagtctcatacctgcacggcctcaagatctctctcattccgatgt 9124963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 42515245 - 42515096
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||||||   |||||| |    
T  42515245 cacgcttaactgtggagttcttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaa 42515146  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
     |||| |||||||| | |||||| |||||| |||||||||||||||||||    
T  42515145 tcatgcagtctcatacctgcacggcctcaggatccctctcattccgatgt 42515096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 50 - 196
Target Start/End: Original strand, 13125129 - 13125276
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| |    
T  13125129 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaa 13125228  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgat 196  Q
    ||||| |||| ||| | |||| | |||||  |||||||||||||||||    
T  13125229 ccatgcagtcccatacctgcagggcctcaagatccctctcattccgat 13125276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 28496007 - 28495858
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | |||| |||||||||||  |||||| |    
T  28496007 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacagttcttataagccttccttcaa 28495908  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | | |||| |||||  |||||||||||||||||||    
T  28495907 ccatgtagtcccatacctacacggcctcaagatccctctcattccgatgt 28495858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 2193409 - 2193251
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaa-agaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||| |||  |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  2193409 cacgcttaactgtggagttcctatgaaatgagctaccgaatagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 2193310  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | ||||||  ||||| | ||||||||||||| || ||||||||||    
T  2193309 ccatgcagtcccatacctgcacggtctcaggaaccctctcattccggtg-tgattcggtt 2193251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 54 - 198
Target Start/End: Original strand, 11517386 - 11517530
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 152  Q
    |||||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||    
T  11517386 cttaactgcggagttcttatggaatgagctaccgaaaagtagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttc-accat 11517484  T
Q  153 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    | |||| ||| | || ||| |||||| |||||||||||||||||||    
T  11517485 gcagtcccatacctgtacggcctcaggatccctctcattccgatgt 11517530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 34405584 - 34405742
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  34405584 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcctgttgatataggtagtacccaacaattcttataagccttccttcaa 34405683  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | | || | ||| || ||||||||||||||| || ||||||||||    
T  34405684 ccatgtagtcccatacctacaaggccttaggatccctctcattccggtg-tgattcggtt 34405742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 2465886 - 2465772
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||  |||||| |    
T  2465886 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaactcttataagccttccttcaa 2465787  T
Q  149 ccatggagtctcatg 163  Q
    ||||| |||| ||||    
T  2465786 ccatgtagtcccatg 2465772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 194
Target Start/End: Original strand, 35474113 - 35474259
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    ||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||| || |||  ||||||||||||||||   | ||||     
T  35474113 acacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataagtagtactaaacaattcttataagtctttcttca 35474212  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    |||||| |||||||| | | |||||||| || |||||||||||||||    
T  35474213 accatgtagtctcatacctacacgacctaaggatccctctcattccg 35474259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 2611645 - 2611794
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||| ||||| | ||| ||||||||||||||||||  |||||| |    
T  2611645 cacgcttaactatggagttcttatagaatgggctaccaaaaagaagatgcatcttgttgttatagatagtaccaaacaattcttataagccttccttcca 2611744  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||  |||||||| | | || |||||||| | |||||||||||||||||    
T  2611745 ccatatagtctcatacctacatgacctcaggacccctctcattccgatgt 2611794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 36422405 - 36422260
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  36422405 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 36422306  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||||| |||| ||| | | || | ||| || |||||||||||||||    
T  36422305 ccatgtagtcccatacctacaaggccttaggatccctctcattccg 36422260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 28495601 - 28495749
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||   |   |||||||||||||||   |||||| |    
T  28495601 cacgcttaactgtggagttcttatggaatgagctacctaaaagaagatgcatcttgttgatataggtaaaactcaacaattcttataagtcttccttcaa 28495700  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatg 197  Q
    ||||| |||| ||| | | ||||||||||| ||||||||||||||||||    
T  28495701 ccatgtagtcccatacctacacgacctcaggatccctctcattccgatg 28495749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 2466077 - 2465968
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| ||| ||||||| ||||||||||  |||||| |    
T  2466077 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcaacttgttgatataggtagtaccaaacaactcttataagccttccttcaa 2465978  T
Q  149 ccatggagtc 158  Q
    ||||| ||||    
T  2465977 ccatgtagtc 2465968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 6747591 - 6747740
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||| |||| ||||  |||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  6747591 cacgcttaactgtggagtttttatggaataggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatccttccttcaa 6747690  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| ||| |||| | | |||| |||||| |||||||||||||| ||||    
T  6747691 ccatgtagtatcatacctacacggcctcaggatccctctcattccaatgt 6747740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 214
Target Start/End: Complemental strand, 46425894 - 46425730
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||||||  || ||||||||||||||||||  |  ||| |    
T  46425894 cacgcttaactgtggagttcttatggaataagataccgaaaagaagatgcatcttgttgatataggtaataccaaacaattcttataagccttatttcaa 46425795  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    ||||| |||| ||| | | || |  ||||| |||||||||||||||||| |||||||| |||||||    
T  46425794 ccatgtagtcccatacctacatggtctcaggatccctctcattccgatg-tgattcggcttgtcta 46425730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 2189297 - 2189139
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||| ||  ||||||||||||||||||  || ||| |    
T  2189297 cacgcttaactgtggagttcttatgaaatgagctatcgaaaagaagatgcatcttgttgatataggtagtgccaaacaattcttataagccttctttcaa 2189198  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||  | |||||  |||||| | ||||||||||||| || ||||||||||    
T  2189197 ccatgcagtcccacacctgcacagcctcaggaaccctctcattccggtg-tgattcggtt 2189139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 198
Target Start/End: Complemental strand, 18833440 - 18833290
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    |||||||||||||||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||| |||  ||||||||| |||||||  ||| ||     
T  18833440 acacgcttaactgtggagttcttatgtaattagctaccgaaaagaagatgcatcttgttgatataggtagtactaaacaattcatataagctttccctca 18833341  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    |||||| |||  ||| | || ||| |||||| | |||||||||||||||||    
T  18833340 accatgcagttccatacctgtacggcctcaggaaccctctcattccgatgt 18833290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 198
Target Start/End: Complemental strand, 25182515 - 25182365
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    |||| |||||||||| ||||||||| ||||||| ||||||||  |||||| ||||||||||||||||| ||| |||||||||||||||||   ||||||     
T  25182515 acacacttaactgtgaagttcttatggaatgagttaccgaaaataagatgtatcttgttgatataggtagtaccaaacaattcttataagtcttccttca 25182416  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    |||||| |||||||| | |||||   ||||| ||| |||||||||||||||    
T  25182415 accatgcagtctcatacttgcacagtctcaggatctctctcattccgatgt 25182365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 679969 - 679821
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||| ||||||  |||||| ||||||||||||||||||||| ||| | ||||||||||||||||  ||||||      
T  679969 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaatatgcatcttgttgatataggtagta-ccaacaattcttataagccttccttcag 679871  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| | || ||| | | ||||||||||| ||||||||||||| |||||    
T  679870 ccatgtactcccatacctacacgacctcaggatccctctcattctgatgt 679821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 244 - 322
Target Start/End: Complemental strand, 9623140 - 9623061
Alignment:
Q  244 cctcatcagcttgggtgttatattgaccgatgctctatctttgtcgtgatggttctcccact-cgggcttggcatactga 322  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| || ||||||||||||||    
T  9623140 cctcatcagcttgggtgttatattgaccgatgctctatttttgtcgtgatgtttctcccactgcgagcttggcatactga 9623061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 49 - 192
Target Start/End: Original strand, 29357448 - 29357592
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    ||||| ||||||||| |||||||||  || | |||| ||||| ||||||||||||||||||||||| | ||| |||||||||||||||| || ||||||     
T  29357448 acacggttaactgtgtagttcttatgaaacgggctatcgaaaagaagatgcatcttgttgatatagttagtaccaaacaattcttataaacattccttca 29357547  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattc 192  Q
    |||||| |||| ||| | ||||||||||| | || ||||||||||    
T  29357548 accatgcagtcccatacctgcacgacctcgggatacctctcattc 29357592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 26421752 - 26421882
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    ||||||||||||||| ||||||||| ||||| |||||||||| |||||| |||||||||| ||||||  ||| | |||||||||||| |||  | ||||     
T  26421752 acacgcttaactgtgtagttcttatggaatgggctaccgaaaagaagattcatcttgttggtatagggagtacctaacaattcttatgagccttacttca 26421851  T
Q  148 accatggagtctcatgcatgcacgacctcag 178  Q
    |||||| |||||||| |||||||| ||||||    
T  26421852 accatgcagtctcatacatgcacggcctcag 26421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 31743834 - 31743940
Alignment:
Q  67 ttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgca 165  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||||| | | | ||||| ||||||||||||| |||||| |||||| ||||||||||     
T  31743834 ttcttatggaatgggctaccgaaaagaagatgcatcttgttgatatagatagcaccaaaccattcttataagcattccttcaaccatgcagtctcatgct 31743933  T
Q  166 tgcacga 172  Q
    |||||||    
T  31743934 tgcacga 31743940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 137
Target Start/End: Original strand, 26421290 - 26421386
Alignment:
Q  42 aattcagacacgcttaactgtggagttcttatagaatgagctaccgaaagaag-atgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    |||||| ||||| ||||||||||||||||||| |||||  ||||||||| ||  ||||||||||||||||||||| ||||||| |||||||||||||    
T  26421290 aattcaaacacgtttaactgtggagttcttatggaatggactaccgaaaaaaatatgcatcttgttgatataggtagtatcaagcaattcttataag 26421386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 22529227 - 22529392
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    ||||||||||||||| ||||||| |  |||||| ||| |||| |||||||||||||||| |||||| | ||| |||||| |||||||||||  ||||||     
T  22529227 acacgcttaactgtgaagttcttttgtaatgagttactgaaaagaagatgcatcttgtttatatagatagtaccaaacatttcttataagccttccttca 22529326  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    |||||| || | ||| | | || |||||||| ||||||||||||| |||  |||||||||| |||||    
T  22529327 accatgtaggcccatacttacatgacctcaggatccctctcattcggat-atgattcggttcgtcta 22529392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 194
Target Start/End: Original strand, 36015403 - 36015549
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    ||||| ||||||||| ||||||||| ||||| ||||   ||| ||||| |||||||||||||||| || ||| |||||||||||| |||||  ||||||     
T  36015403 acacgtttaactgtgaagttcttatggaatgggctatttaaaagaagaggcatcttgttgatatatgtagtaccaaacaattcttttaagctttccttca 36015502  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||||||||||||||| | |||||  |||  | |||||||||||||||    
T  36015503 accatggagtctcatacttgcactgccttgggatccctctcattccg 36015549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 13122498 - 13122561
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 112  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  13122498 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatata 13122561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 33316877 - 33316716
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||| |||| ||||||||||||||||  || ||||||||||  |||  ||||||||||||||| ||  | |||||||||||||||||    |||||| |    
T  33316877 acacgtttaattgtggagttcttatagtttgggctaccgaaa--aga--catcttgttgatataagtattgtcaaacaattcttataatttttccttcaa 33316782  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    ||||| |||||||| | |||||||| ||| |||   |||||||||||||| ||||| |||||||||    
T  33316781 ccatgtagtctcatacctgcacgacatcaaaatttatctcattccgatgtggattcagtttgtcta 33316716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 53 - 214
Target Start/End: Original strand, 35527117 - 35527278
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 151  Q
    ||||||||||||||||| ||| |||||  |||| |||| ||| ||||||||||||||||||||| | | ||||||||||||||||||  || ||| ||||    
T  35527117 gcttaactgtggagttcctatggaatggactactgaaaagaatatgcatcttgttgatataggtagcaccaaacaattcttataagccttctttcaacca 35527216  T
Q  152 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
       |||| |||   ||||||||||| | |||||||||||| || || |||||||||| |||||    
T  35527217 accagtcccatatttgcacgacctcgggatccctctcatttcggtg-tgattcggttcgtcta 35527278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 5406581 - 5406730
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |  || || ||| |||  ||||||||||||||||||||||||  || ||||||||||||||||    |||||| |    
T  5406581 cacgcttaactgtggagttcttatggtttgggcaaccaaaaataagatgcatcttgttgatataggtaataccaaacaattcttataaatcttccttcaa 5406680  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| |  ||||||| | || |||||| ||||||||||||    
T  5406681 ccatgcagtcccataccggcacgactttaggatccctatcattccgatgt 5406730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 31406577 - 31406665
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    ||||||||||||||||||||||||  || | |||||||||| |||||||||||||||||||||||||   | ||||||||||| |||||    
T  31406577 cacgcttaactgtggagttcttatgaaacgggctaccgaaaagaagatgcatcttgttgatataggtaacaccaaacaattctaataag 31406665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 209
Target Start/End: Original strand, 29039052 - 29039172
Alignment:
Q  88 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactcc-ttctaccatggagtctcatgcatgcacgacctcagaatccctc 186  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||| ||||| |||| ||| |||||| |||| |||   | |||| |||||| || ||||    
T  29039052 aaagaagatgcatgttgttgatataggtagtaccaaacaattcttgtaagc-ctccattcaaccatgtagtcacatatctacacggcctcaggatgcctc 29039150  T
Q  187 tcattccgatgttgattcggttt 209  Q
    ||||||||||| |||||||||||    
T  29039151 tcattccgatg-tgattcggttt 29039172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 7646471 - 7646528
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgtt 106  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  7646471 cacgcttaactgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgtt 7646528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 9625150 - 9625111
Alignment:
Q  10 attatactttggtcaagaagaaatcacagtagaattcaga 49  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9625150 attatactttggtcaagaagaaatcacagtagaattcaga 9625111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 16192472 - 16192385
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataa 136  Q
    ||||||| |||||  ||||||||| ||||| |||||| ||| ||||||||||||||||||| |||||  || ||||||||||||||||    
T  16192472 cacgcttcactgtatagttcttatggaatgggctaccaaaacgaagatgcatcttgttgatgtaggtaataccaaacaattcttataa 16192385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 7461343 - 7461424
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattc 130  Q
    |||||||||||||| |||||||||| |||||| ||||| ||| ||||||| |||||||| |||||| | ||||||||||||||    
T  7461343 acacgcttaactgtagagttcttat-gaatgaactaccaaaaagaagatgtatcttgtttatatagttagtatcaaacaattc 7461424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 43776283 - 43776322
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaa 89  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  43776283 cacgcttaactgtggagttcttatggaatgagctaccgaa 43776322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 7646568 - 7646514
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 103  Q
    |||||||||||||||||||||||| ||||||| ||||| ||| ||||||||||||    
T  7646568 cacgcttaactgtggagttcttatggaatgagttaccgaaaacaagatgcatctt 7646514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 26957603 - 26957708
Alignment:
Q  102 ttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttga 201  Q
    |||||||||||||| ||| ||||||||||||||||||  || ||| |||||| |||  ||| | | |||  |||||  |||||||||||||||||| |||    
T  26957603 ttgttgatataggtagtaccaaacaattcttataagccttctttcaaccatgtagttccatacctacacagcctcaagatccctctcattccgatg-tga 26957701  T
Q  202 ttcggtt 208  Q
    |||||||    
T  26957702 ttcggtt 26957708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 43233523 - 43233478
Alignment:
Q  92 aagatgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||    
T  43233523 aagatgcatcttgttgatatagatagtaccaaacaattcttataag 43233478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 11372601 - 11372501
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 151  Q
    |||||||| |||||||||||| |  ||||||||| |||  || ||||||| ||||| || |||| ||| ||||||||||||||||||  |||||| ||||    
T  11372601 gcttaactttggagttcttatggtttgagctaccaaaaataacatgcatcatgttggtacaggtagtaccaaacaattcttataagccttccttcaacca 11372502  T
Q  152 t 152  Q
    |    
T  11372501 t 11372501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 162
Target Start/End: Complemental strand, 20966199 - 20966091
Alignment:
Q  55 ttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 153  Q
    ||||||||| ||||||||| ||||||||||||| ||| || || |||||||||| |||||||  ||  ||| ||||||||||||   |||||| | ||||    
T  20966199 ttaactgtgaagttcttatggaatgagctaccgaaaataatatacatcttgttggtataggtattacaaaataattcttataagtcatccttcaatcatg 20966100  T
Q  154 gagtctcat 162  Q
     ||||||||    
T  20966099 cagtctcat 20966091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 193
Target Start/End: Original strand, 13124769 - 13124838
Alignment:
Q  124 acaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcattcc 193  Q
    |||||||||||||||  |||||| |||||| |||| ||| | |||||| |||||  ||||||||||||||    
T  13124769 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagatccctctcattcc 13124838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 16811912 - 16811952
Alignment:
Q  122 aaacaattcttataagcactccttctaccatggagtctcat 162  Q
    |||||||||||||||||| |||||| |||||| ||||||||    
T  16811912 aaacaattcttataagcattccttcaaccatgtagtctcat 16811952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 1e-75; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 49 - 241
Target Start/End: Original strand, 13613884 - 13614077
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13613884 acacgcttaactgtggagttcttatagaatgaactaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagtactccttcta 13613983  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtct--aagttgtcaggtaccactcattatcatg 241  Q
    |||||||||||||||||||||| ||||| | |||||||||||||| ||  ||||||||||| |||  ||||||||||||||||||||||||||||    
T  13613984 ccatggagtctcatgcatgcacaacctctggatccctctcattcc-attgtgattcggtttatctaaaagttgtcaggtaccactcattatcatg 13614077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 12691986 - 12692144
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  12691986 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 12692085  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  12692086 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 12692144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 50398979 - 50399144
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||| ||| ||||||||||||||||||  ||||||     
T  50398979 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcgtgttgatataggtagtaccaaacaattcttataagccttccttca 50399078  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    |||||| | |||||| | | ||||  ||||| |||||||||||||||||| |||||||| |||||||    
T  50399079 accatgtaatctcatacctacacggtctcaggatccctctcattccgatg-tgattcggcttgtcta 50399144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 50 - 214
Target Start/End: Original strand, 50398525 - 50398689
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  50398525 cacgcttaactatggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 50398624  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    ||||| ||||  || | | |||| |||||| |||||||||||||||||| |||||||| |||||||    
T  50398625 ccatgtagtcctatacctacacggcctcaggatccctctcattccgatg-tgattcggcttgtcta 50398689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 35871780 - 35871632
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 149  Q
    |||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||||| |||||||  |||||| ||    
T  35871780 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaaatgcatcttgttgatataggtggtaccaaacaattcatataagccttccttcaac 35871681  T
Q  150 catggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    |||| |||| ||| | || ||| |||||| |||||||||||||||||||    
T  35871680 catgaagtcccatacctgtacggcctcaggatccctctcattccgatgt 35871632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 49 - 198
Target Start/End: Complemental strand, 49998790 - 49998640
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   ||||||     
T  49998790 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttca 49998691  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    |||||| |||| ||||| | |||  ||| || |||||||||||||||||||    
T  49998690 accatgcagtcccatgcctacacagccttaggatccctctcattccgatgt 49998640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 44471312 - 44471461
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| |    
T  44471312 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaa 44471411  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||||||| | || ||| |||||  ||| |||||||||||||||    
T  44471412 ccatgtagtctcatacctgtacggcctcaagatctctctcattccgatgt 44471461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 24629420 - 24629578
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||| ||||||| ||| ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||  |    
T  24629420 cacgcttaactgtggaattcttatggaacgaggtaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcattcctttaa 24629519  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | | ||||||||||| | ||||||||||||| || ||||||||||    
T  24629520 ccatgcagtcccatacctacacgacctcaggaaccctctcattccggtg-tgattcggtt 24629578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 4127876 - 4128025
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||| || ||||||||| ||||  |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  4127876 cacgcttaactctgaagttcttatggaattggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 4127975  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||  |||||||||| | || | |||||| |||||||||||||||||||    
T  4127976 ccatatagtctcatgcctacatggcctcaggatccctctcattccgatgt 4128025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 50 - 214
Target Start/End: Original strand, 51331268 - 51331432
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||| | ||| ||||||||||||||||||  |||||| |    
T  51331268 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgtatcttgttgatatagatagtaccaaacaattcttataagccttccttcaa 51331367  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    ||||| |||| ||| | | |||| |||||  || ||||||||||||||| |||||||| |||||||    
T  51331368 ccatgtagtcccatacctacacggcctcatgattcctctcattccgatg-tgattcggcttgtcta 51331432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 57 - 208
Target Start/End: Original strand, 4127431 - 4127582
Alignment:
Q  57 aactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatgga 155  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| || ||| |    
T  4127431 aactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaactatgta 4127530  T
Q  156 gtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||| ||| | | || | |||||| |||||||||||||||||| ||||||||||    
T  4127531 gtcccatacctacatggcctcaggatccctctcattccgatg-tgattcggtt 4127582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 49 - 208
Target Start/End: Original strand, 21220317 - 21220476
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    ||||||||||||||| ||||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||     
T  21220317 acacgcttaactgtgtagttcttatagaatgagttaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcattccttca 21220416  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    |||||  ||| |||| | | || | |||||  ||||||||||||| |||| ||||||||||    
T  21220417 accatatagtttcatacctacatggcctcatgatccctctcattctgatg-tgattcggtt 21220476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 23942776 - 23942934
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||| |||||  ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  23942776 cacgcttaactgtggagttcttatggaatgtgctacaaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 23942875  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||  ||| | | |||| || ||| |||||||||||||||||| ||||||||||    
T  23942876 ccatgtagttccatacctacacggccccaggatccctctcattccgatg-tgattcggtt 23942934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 49 - 208
Target Start/End: Original strand, 29628654 - 29628812
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||||||||| ||||| |||||| ||  ||||  |||||||||||||||||| ||| |||||||||||||||||   |||||| |    
T  29628654 acacgcttaactgtggagttcttatggaatgggctaccaaacaaagacacatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaa 29628753  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||||||| | | |||| |||||| |||||||||||| ||||| ||||||||||    
T  29628754 ccatgtagtctcatacctacacggcctcaggatccctctcatttcgatg-tgattcggtt 29628812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 14351949 - 14351784
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    ||||||||||||||||||||||||| ||||  | |||| ||| ||||||||||||||||||||||| | ||| |||| || ||||| ||||  ||||||     
T  14351949 acacgcttaactgtggagttcttatggaataggataccaaaaagaagatgcatcttgttgatatagatagtaccaaaaaactcttacaagccttccttca 14351850  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    |||||| || ||||| ||||||||||||||| ||||||||||||| | || ||||||||||||||||    
T  14351849 accatgcagactcatacatgcacgacctcaggatccctctcattctggtg-tgattcggtttgtcta 14351784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 54 - 214
Target Start/End: Original strand, 9423849 - 9424009
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 152  Q
    ||||| |||| | ||||||| ||||| |||||  ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||  || ||| |||||    
T  9423849 cttaattgtgaaattcttatggaatgggctactagaaagaagatgcatcttgttgatataggtagtaccaaacaattattataagccttctttcaaccat 9423948  T
Q  153 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    | |||| ||| ||||||||||||||| ||||||||||||||| || |||||||||| |||||    
T  9423949 gcagtcccatacatgcacgacctcaggatccctctcattccggtg-tgattcggttcgtcta 9424009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 21067435 - 21067290
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| || ||| |||| |||| |||| ||   |||||| |    
T  21067435 cacgcttaattgtggagtacttttagaatgagctaccggaaagaagatgcatcttgttgatatatgtagtaccaaataattattattagtcttccttcaa 21067336  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||||| |||||||| ||||||||||||| | |||||||||||||||    
T  21067335 ccatgcagtctcatacatgcacgacctcgggatccctctcattccg 21067290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 1645736 - 1645894
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||||  || |||||||||||||||||   |||||| |    
T  1645736 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtaataccaaacaattcttataagtcttccttcaa 1645835  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | | |||| |||||  || ||||||||||||||| ||||||||||    
T  1645836 ccatgtagtcccatacctacacggcctcaagattcctctcattccgatg-tgattcggtt 1645894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 31817839 - 31817988
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||| || |||||||||  ||||  ||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||||||||  |||||| |    
T  31817839 cacgcttaactatgaagttcttatgaaatggactaccgaaaagaagatgcatcttgttggtataggtagtaccgaacaattcttataagccttccttcaa 31817938  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| |||||| ||||||| ||||||||| ||||||||||    
T  31817939 ccatgcagtcccatacatgcatgacctcataatccctcttattccgatgt 31817988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 24628964 - 24629125
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc---actcctt 145  Q
    |||||||||||||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||||||||||   | |||||    
T  24628964 cacgcttaactgtggagttcttatggaacgagctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctaattcctt 24629063  T
Q  146 ctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
      |||||| |||| ||| | | |||| |||||| | ||||||||||||| || ||||||||||    
T  24629064 taaccatgcagtcccatacctacacggcctcaggaaccctctcattccggtg-tgattcggtt 24629125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 50814812 - 50814899
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 136  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  50814812 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataa 50814899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 198
Target Start/End: Original strand, 14572148 - 14572286
Alignment:
Q  60 tgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtct 159  Q
    |||||||||||||| |  |  ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||   ||||| |||||| ||||     
T  14572148 tgtggagttcttatggtttaggctaccgaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttcaaccatgtagtcc 14572247  T
Q  160 catgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||| | | || | |||||| |||||||||||||||||||    
T  14572248 catacctacatggcctcaggatccctctcattccgatgt 14572286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 23350270 - 23350419
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||| || ||||||||| ||| |||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||  |||||| |    
T  23350270 cacgcttaactatgaagttcttatggaaggagctaccgaaaagaagatgcatcttgttgatataggaagtaccaaacaattcttataagccttccttcaa 23350369  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| | | | || ||| |||||  ||| |||||||||||||||    
T  23350370 ccatgcagtcccctacctgtacggcctcaagatctctctcattccgatgt 23350419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 7678613 - 7678713
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 152  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |||||    
T  7678613 cttaactgtggagttcttatggaataagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaaccat 7678712  T
Q  153 g 153  Q
    |    
T  7678713 g 7678713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 44470862 - 44470950
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    |||||||||||||||||||||||| ||||||| |||  | |||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  44470862 cacgcttaactgtggagttcttatggaatgagttacgaacagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 44470950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 244 - 322
Target Start/End: Original strand, 13614105 - 13614184
Alignment:
Q  244 cctcatcagcttgggtgttatattgaccgatgctctatctttgtcgtgatggttctcccact-cgggcttggcatactga 322  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| || ||||||||||||||    
T  13614105 cctcatcagcttgggtgttatattgaccgatgctctatttttgtcgtgatgtttctcccactgcgagcttggcatactga 13614184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 208
Target Start/End: Original strand, 53996106 - 53996260
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 152  Q
    |||||||||||||||||||| ||||||| |||| ||| ||||||| ||||||||||||||||| ||| ||||||||| ||||||||| |||||| |||||    
T  53996106 cttaactgtggagttcttatggaatgagataccaaaaagaagatgaatcttgttgatataggtagtaccaaacaatttttataagcattccttcaaccat 53996205  T
Q  153 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    | |||| |||   | ||   |||||| |||| ||||||||||||| ||||||||||    
T  53996206 gtagtcccatatctacatagcctcaggatccttctcattccgatg-tgattcggtt 53996260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 27026655 - 27026567
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    |||||||||||  | ||||||||| ||||| |||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  27026655 cacgcttaactacgtagttcttatggaatgggctaccaaaaaaagatgcatcttgttgatataggtagtatcaaacaattcttataagc 27026567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 3169359 - 3169201
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||| |||||||||||||| || || | |||| ||| ||||||||||||||||||||||||| ||| ||||||||| |||||||   |||||| |    
T  3169359 cacgcttaagtgtggagttcttatggattgggttaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataagtcttccttcaa 3169260  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | | |||| |||||  || ||||||||||||||| ||||||||||    
T  3169259 ccatgtagtcccatacctacacggcctcatgattcctctcattccgatg-tgattcggtt 3169201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 54 - 208
Target Start/End: Complemental strand, 4185864 - 4185709
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 152  Q
    ||||||||| |||||||| |||||||||||||| ||| ||||||||||||||||| |||| |||||||||||||||||||||| | | |||||  |||||    
T  4185864 cttaactgtagagttcttgtagaatgagctaccaaaaagaagatgcatcttgttggtatatgtggtatcaaacaattcttatatgtattcctttaaccat 4185765  T
Q  153 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    |  ||||||| | |||| | |||||  | ||||||||||  |||||  ||||||||    
T  4185764 gccgtctcatacctgcatggcctcatgaaccctctcattttgatgtgaattcggtt 4185709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 198
Target Start/End: Original strand, 31817384 - 31817534
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    |||||||||| ||| |||||||||  ||||| ||| | |||| |||||||||| |||||| ||||||| ||| ||||||||| |||||| |  ||||||     
T  31817384 acacgcttaattgtagagttcttaaggaatgggctgcggaaaagaagatgcattttgttggtataggtagtaccaaacaattattataaacgttccttca 31817483  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    |||||| |||||||| ||||||||||||||  |||||||| ||| ||||||    
T  31817484 accatgaagtctcatacatgcacgacctcatgatccctcttatttcgatgt 31817534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 14571708 - 14571817
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |  |  ||||| | |||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||| |    
T  14571708 cacgcttaactgtggagttcttatggtttaggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaa 14571807  T
Q  149 ccatggagtc 158  Q
    ||||| ||||    
T  14571808 ccatgaagtc 14571817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 1464300 - 1464212
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    |||||| || |||| |||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  1464300 cacgctaaattgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 1464212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 27029426 - 27029342
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    |||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||| || ||| |||| ||||||||||||    
T  27029426 cttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataagtagtaccaaataattcttataag 27029342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 15306078 - 15306153
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaa 124  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| ||| ||||    
T  15306078 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaa 15306153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 23943229 - 23943317
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    |||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||| | || |||||||    
T  23943229 cacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtaccaaatattttttataag 23943317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 23091501 - 23091584
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttata 135  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| ||||| || ||| ||||||||| |||||    
T  23091501 gcttaactgtggagtttttatagaataagctaccagaaagaagatgcatcttgttaatatatgtagtaccaaacaatttttata 23091584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 8467826 - 8467936
Alignment:
Q  88 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 187  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||||||   |||||| |||||| |||||||| | |||||   ||||| |||||| |    
T  8467826 aaagaagatgcatcttgttggtataggtagtaccaaacaattcttataagtcttccttcaaccatgtagtctcatacctgcacagtctcaggatcccttt 8467925  T
Q  188 cattccgatgt 198  Q
    ||||| |||||    
T  8467926 cattctgatgt 8467936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 198
Target Start/End: Complemental strand, 17029479 - 17029334
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 152  Q
    |||||||||||||||||||| |||| || |||| |||| || ||||||||||||||||||||| |||  |||||||| ||| |||   || ||| || ||    
T  17029479 cttaactgtggagttcttatggaataaggtaccaaaagtaatatgcatcttgttgatataggtagtactaaacaattattacaagtcttcattcaactat 17029380  T
Q  153 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    | |||| ||| | |||||||||||   |||||||||||||||||||    
T  17029379 gcagtcccatacttgcacgacctctagatccctctcattccgatgt 17029334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 209
Target Start/End: Original strand, 24271552 - 24271699
Alignment:
Q  64 gagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatg 163  Q
    |||||||||| ||||| |||||| ||| || ||||||||||||  ||||||| |||||||| |||||||||| |   | |||  |||||| ||||||||     
T  24271552 gagttcttatggaatgggctacccaaaaaatatgcatcttgttcgtataggtagtatcaaataattcttatatgtcttactttaaccatgtagtctcata 24271651  T
Q  164 catg--cacgacctcagaatccctctcattccgatgttgattcggttt 209  Q
    | ||  ||||||||||| | |||||||||||||||||  |||||||||    
T  24271652 cctgcacacgacctcaggaaccctctcattccgatgtgaattcggttt 24271699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 138
Target Start/End: Complemental strand, 17628669 - 17628575
Alignment:
Q  45 tcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    |||| |||||| ||||||||| ||||||| |  || |||| ||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  17628669 tcaggcacgctcaactgtggaattcttatgggttgggctatcgaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataagc 17628575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 136
Target Start/End: Original strand, 52048659 - 52048740
Alignment:
Q  55 ttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 136  Q
    ||||||||||||||||||| ||||||  |||  || ||||||||||||||||  |||| || ||||||||||||||||||||    
T  52048659 ttaactgtggagttcttatggaatgacttacaaaatgaagatgcatcttgttagtatacgtagtatcaaacaattcttataa 52048740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 133
Target Start/End: Complemental strand, 33765013 - 33764929
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattctta 133  Q
    ||||||||| |||| |||||||||| ||||||||||  ||| ||||||||||||||||| ||||||| | | |||||||||||||    
T  33765013 cacgcttaagtgtgaagttcttataaaatgagctacaaaaaagaagatgcatcttgttggtataggtagcaccaaacaattctta 33764929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 13612096 - 13612135
Alignment:
Q  10 attatactttggtcaagaagaaatcacagtagaattcaga 49  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13612096 attatactttggtcaagaagaaatcacagtagaattcaga 13612135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 21067884 - 21067760
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 149  Q
    |||||||||||||| ||||||||| |||||  ||||| ||| ||  || ||||||||||||||||| | | |||||||||||||||||   |||||| ||    
T  21067884 cacgcttaactgtgaagttcttatggaatggactaccaaaaaaa--tgtatcttgttgatataggtagcaccaaacaattcttataagtcttccttcaac 21067787  T
Q  150 catggagtctcatgcatgcacgacctc 176  Q
    |||| |||| ||| | |||||| ||||    
T  21067786 catgcagtcccatacctgcacggcctc 21067760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 27578444 - 27578531
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataa 136  Q
    ||||||||||| |||||||||||| |  || | |||||||| ||||||||||||||||||||||||| | | |||| |||||||||||    
T  27578444 cacgcttaactatggagttcttatggtttgggataccgaaaagaagatgcatcttgttgatataggtagcaccaaataattcttataa 27578531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 43928989 - 43929116
Alignment:
Q  88 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 187  Q
    |||||||||||||||||||| |||| || ||| |||||||||||| |||||  |||||| ||||   |||||||| | |||||| | |||| | ||||||    
T  43928989 aaagaagatgcatcttgttggtatatgtagtaccaaacaattcttgtaagctttccttcgaccaaatagtctcatacctgcacggcttcaggaaccctct 43929088  T
Q  188 cattccgatgttgattcggtttgtctaa 215  Q
    |||| | | || ||||||||||| ||||    
T  43929089 catttcaaagtggattcggtttgcctaa 43929116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 53391990 - 53391927
Alignment:
Q  99 atcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcat 162  Q
    ||||||||||||||| ||||||||||||||| ||||||||| | |||| |||||| ||||||||    
T  53391990 atcttgttgatatagatggtatcaaacaatttttataagcatttcttcaaccatgcagtctcat 53391927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 88 - 198
Target Start/End: Complemental strand, 41870032 - 41869922
Alignment:
Q  88 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 187  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||||||||   |||||| | |||| |||| |||  ||| ||   ||||| ||||||||    
T  41870032 aaagaagatgcgtcttgttgatataggtagtatcatacaattcttataagtcttccttcaatcatgcagtcccatatatgtacagtctcaggatccctct 41869933  T
Q  188 cattccgatgt 198  Q
    || ||||||||    
T  41869932 cactccgatgt 41869922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 20306151 - 20306237
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    |||||||||| ||| |||||||||  |||| | |||| |||  ||||||||||||||||||||| | ||| ||||||||||||||||||    
T  20306151 cacgcttaaccgtgtagttcttatgaaatgggataccaaaa--agatgcatcttgttgatatagatagtaccaaacaattcttataagc 20306237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 17028984 - 17028878
Alignment:
Q  92 aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 191  Q
    |||| ||||||||||||||||||| | | | ||||||||||| ||   ||||||| || ||| |||| ||| |||||| | | |||| ||||||||||||    
T  17028984 aagacgcatcttgttgatataggtagcacctaacaattcttacaaatcctccttcaactatgcagtcccatacatgcaaggcttcaggatccctctcatt 17028885  T
Q  192 ccgatgt 198  Q
    |||||||    
T  17028884 ccgatgt 17028878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 23976245 - 23976293
Alignment:
Q  88 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 136  Q
    |||||||||||||||||||  ||||||| ||| ||||||||||||||||    
T  23976245 aaagaagatgcatcttgttagtataggtagtaccaaacaattcttataa 23976293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 135
Target Start/End: Complemental strand, 42838780 - 42838690
Alignment:
Q  49 acacgcttaactgtgga-gttcttatagaatgagctaccgaaaga---agatgcatcttgttgatataggtggtatcaaacaattcttata 135  Q
    ||||||||||||||| | |||||||| |||||| ||| ||||| |   |||||||| |||||||||||||| ||| ||||||||| |||||    
T  42838780 acacgcttaactgtgaaagttcttatggaatgaactatcgaaaaagaaagatgcattttgttgatataggtagtaccaaacaatttttata 42838690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 4186315 - 4186224
Alignment:
Q  55 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactcctt 145  Q
    ||||||||| |||||||||  |||| |||||| ||| ||||||| |||||||| || ||||| ||| ||||  ||||||||||||| |||||    
T  4186315 ttaactgtgtagttcttatgcaatgggctaccaaaaagaagatgaatcttgttcatgtaggtagtaccaaatcattcttataagcattcctt 4186224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 87
Target Start/End: Original strand, 11828472 - 11828509
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg 87  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  11828472 cacgcttaactgtggagttcttatggaaggagctaccg 11828509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 34554577 - 34554492
Alignment:
Q  55 ttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagca 139  Q
    |||||| || ||||||||| |||||  ||||| |||  || |||||||||| || ||||||| || ||||||||||||||||||||    
T  34554577 ttaactatgaagttcttatggaatggtctaccaaaaataaaatgcatcttgctggtataggtagtgtcaaacaattcttataagca 34554492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 27578896 - 27578984
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    |||||||||||||| ||||||||| ||  | ||||| |||| |||||||  |||  |||||||| || ||| |||||||||||||||||    
T  27578896 cacgcttaactgtgtagttcttatggatagggctactgaaaagaagatgtgtctaattgatatatgtagtaccaaacaattcttataag 27578984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 8e-49; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 49 - 198
Target Start/End: Original strand, 3886593 - 3886743
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||| |||||||    
T  3886593 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcatataagcattccttct 3886692  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    |||||| |||| ||| | || |||||||||| |||||||||||||||||||    
T  3886693 accatgcagtcccatacttgtacgacctcaggatccctctcattccgatgt 3886743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 2474112 - 2473963
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||  |||||| |    
T  2474112 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggcagtaccaaacaattcttataagccttccttcaa 2474013  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||||||||| || ||||||| || |||||||||||||||||||    
T  2474012 ccatgcagtctcatgcctgtacgaccttaggatccctctcattccgatgt 2473963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 17445448 - 17445606
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccga-aagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  17445448 cacgcttaactgtggatttcttatggaatgagctaccgataagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 17445547  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||||| | |||| |||||| |||||||||||| ||||| ||||||||||    
T  17445548 ccatgtagtcccatgcctacacggcctcaggatccctctcatttcgatg-tgattcggtt 17445606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 189218 - 189072
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 151  Q
    ||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||  |||||| ||||    
T  189218 gcttaactgtggagttcttatggaatgagctaccgaaaagaagatacatcttgttgatataggtagtaccaaacaattcttataagccttccttcaacca 189119  T
Q  152 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    || |||| ||| |||| ||| |||||| |||||||||||||||||||    
T  189118 tgcagtcccatacatgtacggcctcaggatccctctcattccgatgt 189072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 45 - 198
Target Start/End: Complemental strand, 22556694 - 22556540
Alignment:
Q  45 tcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactcc 143  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||  |||    
T  22556694 tcagccacgcttaactgtgaagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcatataagccttcc 22556595  T
Q  144 ttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||| |||||| |||| ||| | |||||| |||||| | |||||||||||||||||    
T  22556594 ttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccgatgt 22556540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 8642027 - 8642176
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||  |||||| |    
T  8642027 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaataattcttataagccttccttcaa 8642126  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | |||||| ||| || ||||||||||||| |||||    
T  8642127 ccatgcagtcccatacctgcacggccttaggatccctctcattctgatgt 8642176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 10927396 - 10927554
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||| ||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  10927396 cacgtttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 10927495  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||||||| | | |||| |||||  |||||||||||||||||| ||||||||||    
T  10927496 ccatgtagtctcatacctacacggcctcaagatccctctcattccgatg-tgattcggtt 10927554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 34867943 - 34867785
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  34867943 cacgcttaactatggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 34867844  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  34867843 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 34867785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 1822059 - 1821910
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||| |||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  1822059 cacgcttaaatgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 1821960  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||||||| | |||||||||| |  ||| |||||||||||||||    
T  1821959 ccatgcagtctcatacctgcacgaccttaagatctctctcattccgatgt 1821910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 8391315 - 8391473
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||| |||||||||||| |||| ||||||||||| |||||||||||||||||||| ||| | || |||||||||||||||||   |||||| |    
T  8391315 cacgcttaactatggagttcttatggaattagctaccgaaaagaagatgcatcttgttgatacaggag-taccaaacaattcttataagtcttccttcaa 8391413  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggttt 209  Q
     |||| |||||||||| | |||| ||||||||||||||||||||||||| |||||||||||    
T  8391414 tcatgtagtctcatgcctacacggcctcagaatccctctcattccgatg-tgattcggttt 8391473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 10926939 - 10927097
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||| ||||||||||||||||||| |||||  ||||| |||| |||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  10926939 cacgtttaactgtggagttcttatggaatggactaccaaaaggaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 10927038  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | | ||||||||||| ||||||||||||| |||| ||||||||||    
T  10927039 ccatgtagtcccatacctacacgacctcaggatccctctcattctgatg-tgattcggtt 10927097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 54 - 208
Target Start/End: Original strand, 21886143 - 21886297
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 152  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||| || ||| ||||||||||||||||||  |||||| |||||    
T  21886143 cttaactttggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataagccttccttcaaccat 21886242  T
Q  153 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    | |||| ||| | ||||| ||||||| | ||||||||||||| || ||||||||||    
T  21886243 gcagtcccatacctgcacaacctcaggaaccctctcattccggtg-tgattcggtt 21886297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 2193969 - 2193824
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  2193969 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 2193870  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||||| |||| ||| | | || | |||||  |||||||||||||||    
T  2193869 ccatgtagtcccatacctacaaggcctcatgatccctctcattccg 2193824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 2474558 - 2474409
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||   |||||| |    
T  2474558 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagtcttccttcaa 2474459  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| |||   || ||||||| || ||| |||||||||||||||    
T  2474458 ccatgcagtcccatatctgtacgaccttaggatctctctcattccgatgt 2474409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 54 - 214
Target Start/End: Original strand, 20039472 - 20039631
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 153  Q
    ||||||||| |||||||||| ||||| |||||| |||||| ||||||||||||||||||||| ||| ||||||||||||||||||  |||||| || |||    
T  20039472 cttaactgtagagttcttatggaatgggctaccaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaactatg 20039571  T
Q  154 gagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
     ||||  || | | |||| |||||  |||||||||||||||||| ||||||||||||||||    
T  20039572 tagtcctatacctacacggcctcatgatccctctcattccgatg-tgattcggtttgtcta 20039631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 42788639 - 42788797
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   || ||| |    
T  42788639 cacgcttaactgtggagttcttgtggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttctttcaa 42788738  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||  | | |||| |||||| ||||||||||||||| || ||||||||||    
T  42788739 ccatgtagtcccaatcctacacggcctcaggatccctctcattccgttg-tgattcggtt 42788797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 45 - 198
Target Start/End: Complemental strand, 22557127 - 22556973
Alignment:
Q  45 tcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactcc 143  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||| |||||||  |||    
T  22557127 tcaggcacgcttaactgtgaagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatattggtagtaccaaacaattcatataagccttcc 22557028  T
Q  144 ttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||| |||||| |||| ||| | |||||| |||||  | | |||||||||||||||    
T  22557027 ttcaaccatgcagtcccatacctgcacggcctcatgaactctctcattccgatgt 22556973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 34371765 - 34371656
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||| |||||| |    
T  34371765 cacgcttaactgtggtgttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagcattccttcaa 34371666  T
Q  149 ccatggagtc 158  Q
    ||||| ||||    
T  34371665 ccatgcagtc 34371656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 34372221 - 34372112
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||| |||||| |    
T  34372221 cacgcttaactgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagcattccttcaa 34372122  T
Q  149 ccatggagtc 158  Q
    ||||| ||||    
T  34372121 ccatgtagtc 34372112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 3887050 - 3887199
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||| ||||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||| |||| ||||| ||||||   |||||| |    
T  3887050 cacgcttaactgtgaagttcttatggaatgagttaccgaaaagaagatgcatcttgttgatataggtagtaccaaataattcatataagtcttccttcaa 3887149  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | || ||| |||||| ||| |||||||||||||||    
T  3887150 ccatgcagtcccatacctgtacggcctcaggatcactctcattccgatgt 3887199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 27646828 - 27646986
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||||||||  |||| |||||| ||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||  |||||| |    
T  27646828 cacgcttaactgtggagttcttatgaaatgggctaccaaaaagaagatgcatcttgttgttataggtagtaccaaacaattcttataagccttccttcaa 27646927  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| || | ||| | | |||| ||  || |||||||||||||||||| ||||||||||    
T  27646928 ccatgtagccccatacctacacggccctaggatccctctcattccgatg-tgattcggtt 27646986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 39147092 - 39146943
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||| ||||| || |||||||||||||||||||||    ||||| |    
T  39147092 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttaatataagtagtatcaaacaattcttataagtctaccttcaa 39146993  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | | |||| |||||  |||||||||||| ||||||    
T  39146992 ccatgtagtcccatacctacacggcctcatgatccctctcatttcgatgt 39146943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 30719798 - 30719957
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||| |||||||||||||| |  ||| ||||||||| ||||||||||||||||  ||||||| ||| |||||||||| |||||||  |||||| |    
T  30719798 cacgcttaattgtggagttcttatggtttgacctaccgaaaagaagatgcatcttgtttttataggtagtaccaaacaattcatataagccttccttcaa 30719897  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggttt 209  Q
    | |||  ||| ||| | ||||| ||||||| ||||||||||||| |||| |||||||||||    
T  30719898 caatgatgtcccatacttgcacaacctcaggatccctctcattctgatg-tgattcggttt 30719957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 194
Target Start/End: Complemental strand, 18304581 - 18304439
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 151  Q
    ||||||||||||| ||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||  |||||||  | | ||  |||    
T  18304581 gcttaactgtggaattcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtagtaccaaacaatttatataagcttttcatcatcca 18304482  T
Q  152 tggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    || |||| ||| | | ||||||||||| |||| ||||||||||    
T  18304481 tgtagtcccatacctacacgacctcaggatccttctcattccg 18304439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 15513005 - 15513164
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc--actccttc 146  Q
    |||| |||| |||||||||||||| ||||||| |||| ||| ||||||||||||||||||||| ||| ||| | ||||||||||||||||  | ||||||    
T  15513005 cacgtttaattgtggagttcttatggaatgagataccaaaaagaagatgcatcttgttgatattggtagta-ccaacaattcttataagcatattccttc 15513103  T
Q  147 taccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
     |||||| |||| ||| | | |||  ||| |  |||||||||||||||||| ||||||||||    
T  15513104 aaccatgtagtcccatacctacacagcctaatgatccctctcattccgatg-tgattcggtt 15513164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 30684549 - 30684698
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |  ||| ||||||||| ||||||||||||||||  ||||| | ||| |||||||||| |||||||   ||||| |    
T  30684549 cacgcttaactgtggagttcttatggtttgacctaccgaaaagaagatgcatcttgtttttatagatagtaccaaacaattcatataagcctcccttcaa 30684648  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    | |||  ||  ||| | ||||| ||||||| ||||| |||||||||||||    
T  30684649 caatgatgttccatacttgcacaacctcaggatccccctcattccgatgt 30684698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 29680099 - 29680166
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggt 115  Q
    |||||||||||||||||||||||||  |||| |||||| ||| |||||||||||||||||||||||||    
T  29680099 acacgcttaactgtggagttcttatgtaatgggctaccaaaaagaagatgcatcttgttgatataggt 29680166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 4673466 - 4673552
Alignment:
Q  52 cgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    |||||||||||||||||||||| ||||||  |||| ||| ||| |||||||||||||||| ||||| || |||| ||||||||||||    
T  4673466 cgcttaactgtggagttcttatggaatgaaataccaaaaagaatatgcatcttgttgatacaggtgctaccaaataattcttataag 4673552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 24182239 - 24182381
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 149  Q
    |||||||||||||  |||| |||| |  || | ||||||||||||||||||||||||| ||||| | ||| |||| |||||||||||||  |||||| ||    
T  24182239 cacgcttaactgttaagttattatggtttggggtaccgaaagaagatgcatcttgttggtatagatagtaccaaataattcttataagccttccttcaac 24182338  T
Q  150 catggagtctcatgcatgcacgacctcagaatccctctcattc 192  Q
    |||   ||||||| | ||||||  ||||  |||||||||||||    
T  24182339 catttcgtctcatacttgcacgttctcaagatccctctcattc 24182381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 54 - 138
Target Start/End: Original strand, 20858538 - 20858623
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    ||||||| |||||||||||| ||||||||||| | |||||||| |||||||||||||||||    || ||||||||||||||||||    
T  20858538 cttaactatggagttcttatggaatgagctacagaaaagaagaagcatcttgttgatatagaaaataccaaacaattcttataagc 20858623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 18750201 - 18750293
Alignment:
Q  62 tggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 153  Q
    |||||||||||| |||| ||||||||||| ||||||||||||| ||| ||||||| ||| ||||||||| |||||| |  |||||| ||||||    
T  18750201 tggagttcttatggaataagctaccgaaaagaagatgcatctttttggtataggtagtaccaaacaattgttataatccttccttcaaccatg 18750293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 11757274 - 11757337
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 112  Q
    |||||||||||||||||||||||| || ||| |||||| ||||||||||||| |||||||||||    
T  11757274 cacgcttaactgtggagttcttatggattgaactaccgaaaagaagatgcattttgttgatata 11757337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 11160712 - 11160822
Alignment:
Q  87 gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctc 186  Q
    ||||||| |||||||||||||| |||| | ||| ||||||||| ||||||||  |||||| || ||| ||| |||| | | |||||| |||  |||||||    
T  11160712 gaaagaatatgcatcttgttgacatagatagtaccaaacaattattataagccttccttcaactatgtagtgtcatacctacacgacttcatgatccctc 11160811  T
Q  187 tcattccgatg 197  Q
    |||||||||||    
T  11160812 tcattccgatg 11160822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 136
Target Start/End: Original strand, 4657992 - 4658073
Alignment:
Q  56 taactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataa 136  Q
    |||||||| ||||||||| |||||  ||||| ||| |||||||||| |||||| ||||||| ||||||||||| ||||||||    
T  4657992 taactgtgaagttcttatggaatggactaccaaaaagaagatgcatgttgttgttataggtagtatcaaacaagtcttataa 4658073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 22975076 - 22975152
Alignment:
Q  122 aaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    |||||||||||||||||  | |||| |||||| |||| ||| | |||||| |||||| |||||||||||||||||||    
T  22975076 aaacaattcttataagcttttcttcaaccatgcagtcacatacctgcacggcctcaggatccctctcattccgatgt 22975152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 214
Target Start/End: Original strand, 5066923 - 5067048
Alignment:
Q  88 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 187  Q
    |||||| ||||||||||||||||||| |  || |||||||||||||||||   |||||  | |||  |||||||| |||||||| |||| | ||| ||||    
T  5066923 aaagaaaatgcatcttgttgatatagataataccaaacaattcttataagttttcctttaatcatacagtctcatacatgcacggcctcgggatctctct 5067022  T
Q  188 cattccgatgttgattcggtttgtcta 214  Q
    ||||| | || ||||||| ||||||||    
T  5067023 cattctggtg-tgattcgatttgtcta 5067048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 209
Target Start/End: Original strand, 2058696 - 2058808
Alignment:
Q  96 tgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccga 195  Q
    |||||||||||||||||||| ||| |||||||||| ||||||   |||||| | |||  ||||||||   |||| ||| |||| ||| |||||| |||||    
T  2058696 tgcatcttgttgatataggtagtaccaaacaattcatataagtcttccttcaatcatccagtctcatagctgcatgacttcaggatctctctcaatccga 2058795  T
Q  196 tgttgattcggttt 209  Q
    || |||||||||||    
T  2058796 tg-tgattcggttt 2058808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 153
Target Start/End: Complemental strand, 42429259 - 42429194
Alignment:
Q  88 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 153  Q
    |||||| |||||| ||||||||| |||| ||| |||||||||||||||||  ||||||| ||||||    
T  42429259 aaagaatatgcatattgttgataaaggtagtaccaaacaattcttataagtcctccttcaaccatg 42429194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 16370740 - 16370811
Alignment:
Q  88 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtct 159  Q
    ||||||||| | ||||||||||||| || ||| |||||||||||||||||   |||||| |||||| |||||    
T  16370740 aaagaagatacgtcttgttgatataagtagtaccaaacaattcttataagttttccttcaaccatgcagtct 16370811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 43356652 - 43356760
Alignment:
Q  88 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 187  Q
    ||||||||||||| |||||| | ||||| ||| |||||||||||||||||   ||| || | |||| |||||||| | |||| || ||||| | ||||||    
T  43356652 aaagaagatgcatattgttggtttaggttgtaccaaacaattcttataagtcatcc-tcaatcatgcagtctcatacctgcatgatctcagga-ccctct 43356749  T
Q  188 cattccgatgt 198  Q
    |||||||||||    
T  43356750 cattccgatgt 43356760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 32574651 - 32574740
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    ||||||||||| || |||| ||||||  || |||||| |||| ||||||||| |||||  ||||||| ||| |||||||||| |||||||    
T  32574651 cacgcttaactatgaagttattatagtttgggctaccaaaagaaagatgcattttgtttgtataggtagtaccaaacaattcctataagc 32574740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 107456 - 107605
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||  |||||| |    
T  107456 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatattggtagtatcaaacaattcttataagccttccttcaa 107555  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | || ||| ||||||||||||||||||||||||||    
T  107556 ccatgcagtcccatacctgtacggcctcagaatccctctcattccgatgt 107605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 8e-46; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 31284269 - 31284418
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  31284269 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 31284368  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | ||||||||||||  |||||||||||||||||||    
T  31284369 ccatgcagtcccatacctgcacgacctcaagatccctctcattccgatgt 31284418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 28561899 - 28561754
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  28561899 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 28561800  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||||| |||| ||| | |||||| |||||| | |||||||||||||    
T  28561799 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccg 28561754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 16811534 - 16811385
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||||||||  |||||| |    
T  16811534 cacgcttaactgtggaattcttatggaatgagctaccgaaaagaagatgcatcttgttgaaataggtagtacccaacaattcttataagccttccttcaa 16811435  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    |||||||||| ||  | | |||| |||||| |||||||||||||||||||    
T  16811434 ccatggagtcccaaacctacacggcctcaggatccctctcattccgatgt 16811385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 54 - 194
Target Start/End: Complemental strand, 39653313 - 39653172
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 152  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||  |||||| |||||    
T  39653313 cttaactgtggagttctcatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtatccaacaattcttataagctttccttcaaccat 39653214  T
Q  153 ggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    | |||| ||| | |||||| |||||| | |||||||||||||    
T  39653213 gcagtcccatacctgcacggcctcaggaaccctctcattccg 39653172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 41472453 - 41472305
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||| ||||| ||||||||||||| |||||| ||||||||| |||||||||||||||||||||| || ||| ||||||||||||||||||  |||||| |    
T  41472453 cacgtttaaccgtggagttcttatggaatgatctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataagc-ttccttcaa 41472355  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||||||| | || |||||||||| |||||||||||||||||||    
T  41472354 ccatgcagtctcatacctgtacgacctcaggatccctctcattccgatgt 41472305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 50347899 - 50347754
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  50347899 cacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 50347800  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||| | |||||||| ||| || | |||||| |||||||||||||||    
T  50347799 ccaagtagtctcatacatacaaggcctcaggatccctctcattccg 50347754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 190
Target Start/End: Original strand, 25239069 - 25239211
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    ||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||| |||||||||||||  ||||||     
T  25239069 acacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagcgttccttca 25239168  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcat 190  Q
    |||||  |||| ||| | | |||||||||||||||||||||||    
T  25239169 accatatagtcccatacctacacgacctcagaatccctctcat 25239211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 50 - 194
Target Start/End: Original strand, 11180027 - 11180172
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  11180027 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 11180126  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||||| |||| ||| | | || | |||||| |||||||||||||||    
T  11180127 ccatgtagtcccatacctacaaggcctcaggatccctctcattccg 11180172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 14814102 - 14813944
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| ||||||||||| ||| ||||||||| ||||||||  |||||  |    
T  14814102 cacgcttaactgtggagttcttatggaacgagctaccgaaaagaagatgcatcttattgatataggtagtaccaaacaattattataagccttcctttaa 14814003  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||||||| | | |||| |||||| | ||||||||||||| || ||||||||||    
T  14814002 ccatgcagtctcatacctacacggcctcaggaaccctctcattccggtg-tgattcggtt 14813944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 50 - 159
Target Start/End: Original strand, 13150547 - 13150657
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  13150547 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 13150646  T
Q  149 ccatggagtct 159  Q
    ||||| |||||    
T  13150647 ccatgtagtct 13150657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 198
Target Start/End: Complemental strand, 39641091 - 39640941
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    ||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||||| ||| ||||||| |||||||||   ||||||     
T  39641091 acacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttattgatataggtagtaccaaacaactcttataagtcttccttca 39640992  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    |||||| |||||||| | | |||| |||||| ||| ||||||||| |||||    
T  39640991 accatgtagtctcatacctacacggcctcaggatctctctcattctgatgt 39640941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 8067433 - 8067284
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||| |||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||  |||||||||||||||||   ||||| |    
T  8067433 cacgcttaactatggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagccggccttcaa 8067334  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| | || ||| | |||||| ||||||  ||||||||||||||||||    
T  8067333 ccatgcaatcccatacctgcacggcctcagggtccctctcattccgatgt 8067284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 20885110 - 20885259
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||| |||||||||||||| ||||| |||||  ||| ||||||||||||||||||||||||| |||||||||||||||||||||   |||||| |    
T  20885110 cacgcttaattgtggagttcttatggaatgtgctactaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttataagtcttccttcaa 20885209  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | | ||||||||||  |||||||||||| ||||||    
T  20885210 ccatgtagtcacatacctacacgacctcaagatccctctcattgcgatgt 20885259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 25230241 - 25230390
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||| |||||||||||||||||| ||||| |||||| ||| ||||||| ||||||||||||||||| ||| |||| |||||||||||||  |||||| |    
T  25230241 cacgcataactgtggagttcttattgaatgggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataattcttataagccttccttcaa 25230340  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | | ||||||||||| ||||||||| |||||||||    
T  25230341 ccatgtagtcccatacctacacgacctcaggatccctctccttccgatgt 25230390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 25237828 - 25237977
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||| |||||||||||||||||| ||||| |||||| ||| ||||||| ||||||||||||||||| ||| |||| |||||||||||||  |||||| |    
T  25237828 cacgcataactgtggagttcttattgaatgggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataattcttataagccttccttcaa 25237927  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | | ||||||||||| ||||||||| |||||||||    
T  25237928 ccatgtagtcccatacctacacgacctcaggatccctctccttccgatgt 25237977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 25248264 - 25248115
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||| ||| |||||||| |||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||| || |||||  |    
T  25248264 cacgctgaaccgtggagttattatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaacattcctttaa 25248165  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | |||||| ||| ||||||||||||||||||||||    
T  25248164 ccatgcagtcccatacctgcacggccttagaatccctctcattccgatgt 25248115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 27187323 - 27187472
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||  |||||||||| ||| ||||||||||||||||||  || ||  |    
T  27187323 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttagtgatataggtagtaccaaacaattcttataagccttcatttaa 27187422  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| |||||||  |||||| |||||||||||||| ||||    
T  27187423 ccatgcagtcccatacatgcacagcctcaggatccctctcattccaatgt 27187472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 214
Target Start/End: Complemental strand, 2911248 - 2911084
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||||||||  |||||||||||| |||||| || || ||| |    
T  2911248 cacgcttaactgtggagttcttatggaatgagctaccaaaaagaatatgcatcttgttgatataggtaatatcaaacaatttttataaccattctttcaa 2911149  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    |||||  ||| ||| | |||||| |||| | ||||||||||||| | || |||||||||| |||||    
T  2911148 ccatgtggtcccatacctgcacggcctcgggatccctctcattcaggtg-tgattcggttcgtcta 2911084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 194
Target Start/End: Original strand, 13150092 - 13150237
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||| ||| | ||||||||||||||||  |||||| |    
T  13150092 cacgcttaactgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataagccttccttcaa 13150191  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||||| |||| ||| | | || | |||||| | |||||||||||||    
T  13150192 ccatgtagtcccatacctacaaggcctcaggagccctctcattccg 13150237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 30529840 - 30529691
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||| || ||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||| |||||||||||||  | |||| |    
T  30529840 cacgcttaactatgaagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagccttacttcaa 30529741  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||||||| | | |||  |||||| |||||||||||||||||||    
T  30529740 ccatgtagtctcatacctacacagcctcaggatccctctcattccgatgt 30529691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 32227653 - 32227509
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||||| ||| | ||||||||||||||||  |||||| |    
T  32227653 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataagccttccttcaa 32227554  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||||| |||| ||| | | || | |||||| |||||||||||||||    
T  32227553 ccatgtagtcccatacctacaaggcctcag-atccctctcattccg 32227509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 7477341 - 7477195
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 151  Q
    |||||| |||||||||||||| |  || |||||||||| ||||||| |||||||||||||| || ||| |||| |||||||||||||  |||||| ||||    
T  7477341 gcttaaatgtggagttcttatggtttgggctaccgaaaagaagatgtatcttgttgatataagtagtaccaaaaaattcttataagccttccttcaacca 7477242  T
Q  152 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    || |||||||| | |||||||| | || |||||||||||||||||||    
T  7477241 tgcagtctcatacctgcacgactttaggatccctctcattccgatgt 7477195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 7494031 - 7493885
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 151  Q
    |||||| |||||||||||||| |  || |||||||||| |||||||||||||||||||||| || ||| |||| |||||||||||||  |||||| ||||    
T  7494031 gcttaaatgtggagttcttatggtttgggctaccgaaaagaagatgcatcttgttgatataagtagtaccaaaaaattcttataagccttccttcaacca 7493932  T
Q  152 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    || |||||||| | |||||||| | || ||| |||||||||||||||    
T  7493931 tgcagtctcatacctgcacgactttaggatctctctcattccgatgt 7493885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 25230698 - 25230847
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||| ||| |||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  25230698 cacgcttaattgttgagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataaaccttccttcaa 25230797  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||||||| | | || | |||||| |||||||||||||| ||||    
T  25230798 ccatgtagtctcatacctacatggcctcaggatccctctcattccaatgt 25230847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 25238285 - 25238434
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||| ||| |||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  25238285 cacgcttaattgttgagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataaaccttccttcaa 25238384  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||||||| | | || | |||||| |||||||||||||| ||||    
T  25238385 ccatgtagtctcatacctacatggcctcaggatccctctcattccaatgt 25238434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 50 - 194
Target Start/End: Original strand, 32227214 - 32227359
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||||||||  ||||||||||| ||| |||||||||||||||| |||||||| ||| | ||||||||||||||||  |||||| |    
T  32227214 cacgcttaactgtggagttcttatgaaatgagctaccaaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataagccttccttcaa 32227313  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||||| |||| ||| | | || | ||| || |||||||||||||||    
T  32227314 ccatgtagtcccatacctacaaggccttaggatccctctcattccg 32227359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 32386727 - 32386830
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| |    
T  32386727 cacgcttaactgtggagttcttatggaattagctactgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaa 32386826  T
Q  149 ccat 152  Q
    ||||    
T  32386827 ccat 32386830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 14820307 - 14820218
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    |||||||||||||||||||||||| ||| ||||||||||||  ||||||||||||||||||||| || ||| ||||||||||||||||||    
T  14820307 cacgcttaactgtggagttcttatggaacgagctaccgaaaataagatgcatcttgttgatataagtagtaccaaacaattcttataagc 14820218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 25238677 - 25238790
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||| || | ||| |||||||||||||||||   |||||| |    
T  25238677 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgataaagatagtaccaaacaattcttataagtcttccttcaa 25238776  T
Q  149 ccatggagtctcat 162  Q
    ||||| ||||||||    
T  25238777 ccatgtagtctcat 25238790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 4067353 - 4067441
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    ||||||||||||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  4067353 cacgcttaactgtggagttcttatgtaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataag 4067441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 37045188 - 37045030
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||  | |||| ||| ||||||||| |||||||||||||||  || ||||||||||||||||||| ||||||      
T  37045188 cacgcttaactgtggagttcttatggaatagggtaccaaaaagaagatgcaccttgttgatataggtattaccaaacaattcttataagcattccttcat 37045089  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
     |||| |||| ||  | | |||| |||||| ||||||||||||| |||| ||||||||||    
T  37045088 tcatgtagtcccacacctacacggcctcaggatccctctcattcagatg-tgattcggtt 37045030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 25802540 - 25802626
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttat 134  Q
    ||||||||||||||||| ||||||| ||||| |||| ||||| ||||||||||||||||||||||||| ||| ||||| ||||||||    
T  25802540 acacgcttaactgtggatttcttatggaatgggctatcgaaaagaagatgcatcttgttgatataggtagtaccaaaccattcttat 25802626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 198
Target Start/End: Complemental strand, 16811074 - 16810929
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 152  Q
    ||||| |||| ||||||||| |||||||||||||||| ||||||||||||||| ||||||| | |||   ||||||||||||||||  ||| || |||||    
T  16811074 cttaaatgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgtagatatagttagtacgcaacaattcttataagccttccatcaaccat 16810975  T
Q  153 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    | |||| |||   | |||| |||||  |||||||||||||||||||    
T  16810974 gcagtcccatatctacacggcctcaagatccctctcattccgatgt 16810929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 214
Target Start/End: Original strand, 32796936 - 32797092
Alignment:
Q  58 actgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggag 156  Q
    |||||||||||||||| ||||| |||||  ||| ||||||||||||||||||||||||| ||| |||||||||||||||||   | |||| |||||| ||    
T  32796936 actgtggagttcttatggaatgtgctacaaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttgcttcaaccatgtag 32797035  T
Q  157 tctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    | |||| | | || |  ||||| |||||||| ||| ||||| |||||||| |||||||    
T  32797036 tttcatacctacatggtctcaggatccctcttatttcgatg-tgattcggcttgtcta 32797092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 29224477 - 29224364
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||| |||| ||||||||| |  || |||||||||| ||||||||||||||||  ||||||| ||| |||||||||||||||||   |||||| |    
T  29224477 cacgcttaattgtgaagttcttatggtttgggctaccgaaaagaagatgcatcttgttagtataggtagtaccaaacaattcttataagtcttccttcaa 29224378  T
Q  149 ccatggagtctcat 162  Q
    ||||| ||||||||    
T  29224377 ccatgcagtctcat 29224364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 41474150 - 41474001
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||| ||||||||||| ||||||||||| | ||| ||| ||| ||  ||||||||||||||||  |||||||||||||||||||||   |||||  |    
T  41474150 cacgcttgactgtggagtttttatagaatgatccaccaaaaagaatatcaatcttgttgatataggaagtatcaaacaattcttataagtcttcctttaa 41474051  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||  |||| ||| | || |||||||||  |||||||||||| ||||||    
T  41474050 ccatccagtcacatacctgaacgacctcaagatccctctcatttcgatgt 41474001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 136
Target Start/End: Original strand, 26309987 - 26310069
Alignment:
Q  55 ttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 136  Q
    |||||||| ||||||| || ||||||||||||  |||||||||||||||| ||| |||| || ||| |||| |||||||||||    
T  26309987 ttaactgtcgagttctaatggaatgagctaccataaagaagatgcatctttttggtatatgtagtaacaaaaaattcttataa 26310069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 25802997 - 25803081
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattctta 133  Q
    |||||||||||  |||||||||||  |||| | |||||||| |||||| |||||||||  ||||||| ||| |||||||||||||    
T  25802997 cacgcttaactacggagttcttatgaaatgggataccgaaaagaagatacatcttgtttttataggtagtaccaaacaattctta 25803081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 31103955 - 31104041
Alignment:
Q  54 cttaactgtggagttcttatagaatgag--ctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    ||||| |||| ||||||||| |||||||  ||||| ||| ||| |||||||| |||| ||||| | |||||||||||||||||||||    
T  31103955 cttaaatgtgaagttcttatggaatgagagctaccaaaaagaaaatgcatctagttggtatagatagtatcaaacaattcttataag 31104041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 3890088 - 3890046
Alignment:
Q  92 aagatgcatcttgttgatataggtggtatcaaacaattcttat 134  Q
    ||||||||||||||||||||| || ||| ||||||||||||||    
T  3890088 aagatgcatcttgttgatatatgtagtagcaaacaattcttat 3890046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 54 - 198
Target Start/End: Original strand, 20061188 - 20061333
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 152  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||    
T  20061188 cttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccat 20061287  T
Q  153 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    | |||| ||| | ||||||||||||| ||||||||||||| |||||    
T  20061288 gcagtcccatacctgcacgacctcaggatccctctcattctgatgt 20061333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 20054073 - 20054231
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20054073 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20054172  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20054173 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20054231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 20054529 - 20054687
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20054529 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20054628  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20054629 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20054687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 20054985 - 20055143
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20054985 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20055084  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20055085 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20055143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 20055441 - 20055599
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20055441 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20055540  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20055541 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20055599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 20055897 - 20056055
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20055897 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20055996  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20055997 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20056055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 20056353 - 20056511
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20056353 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20056452  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20056453 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20056511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 20057256 - 20057414
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20057256 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20057355  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20057356 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20057414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 20845654 - 20845812
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20845654 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaacaaacaattcttataagccttccttcaa 20845753  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||||||| | |||||| |||||| | || |||||||||| || ||||||||||    
T  20845754 ccatgcagtctcatacctgcacggcctcaggaaccgtctcattccggtg-tgattcggtt 20845812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 43057516 - 43057674
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| |    
T  43057516 cacgcttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaa 43057615  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||||||| | | |||| |||||| |||||||||||||||||| ||||||||||    
T  43057616 ccatgtagtctcatacctacacggcctcaggatccctctcattccgatg-tgattcggtt 43057674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 49 - 198
Target Start/End: Original strand, 50002699 - 50002849
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  ||||||     
T  50002699 acacgcttaactatggagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttca 50002798  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    |||||| |||| ||||| | |||| |||||| ||| |||||||||||||||    
T  50002799 accatgcagtcccatgcctacacggcctcaggatctctctcattccgatgt 50002849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 35759601 - 35759750
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||| |||||| || ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  35759601 cacgtttaactatgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 35759700  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | |||||| |||||| |||||||||||||||||||    
T  35759701 ccatgcagtcccatacctgcacggcctcaggatccctctcattccgatgt 35759750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 35760907 - 35761056
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||  |||||||| || |||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  35760907 cacgcttaactacggagttctcatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 35761006  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||||||| | |||||| |||||| |||||||||||||||||||    
T  35761007 ccatgcagtctcatacctgcacggcctcaggatccctctcattccgatgt 35761056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 57 - 208
Target Start/End: Original strand, 50002285 - 50002436
Alignment:
Q  57 aactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatgga 155  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||||  |||||| |||||| |    
T  50002285 aactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgataaaggtagtaccaaacaattcttataagccttccttcaaccatgta 50002384  T
Q  156 gtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||| ||||| | |||| |||||  |||||||||||||||||| ||||||||||    
T  50002385 gtcccatgcctacacggcctcatgatccctctcattccgatg-tgattcggtt 50002436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 38341059 - 38340901
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  38341059 cacgcttaactgtgaagttcttatggaatgagctaccgaaatgaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 38340960  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||||| |||||| | || |||||||||| || ||||||||||    
T  38340959 ccatgcagtcccatacctgcacggcctcaggaaccatctcattccggtg-tgattcggtt 38340901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 49 - 198
Target Start/End: Complemental strand, 2635078 - 2634928
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||| ||   ||||||     
T  2635078 acacgcttaactgtggagttcttattgaatgagctaccgaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttatgagttatccttca 2634979  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    |||||| |||| ||| | ||||| ||||||  |||||||||||||||||||    
T  2634978 accatgcagtcccatacctgcacaacctcatgatccctctcattccgatgt 2634928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 20057712 - 20057854
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  || ||| |    
T  20057712 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttctttcaa 20057811  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcatt 191  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||    
T  20057812 ccatgcagtcccatacctgcacggcctcaggaaccctctcatt 20057854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 53 - 214
Target Start/End: Original strand, 30872946 - 30873107
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 151  Q
    |||||| ||||||||||||||||||||  ||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| |||   |||||| ||||    
T  30872946 gcttaattgtggagttcttatagaatggactaccaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttaaaagtcttccttcaacca 30873045  T
Q  152 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    |  |||||||| | |||||| |||||||||||||||||||||| || |||||||||| |||||    
T  30873046 tacagtctcatacctgcacggcctcagaatccctctcattccggtg-tgattcggttcgtcta 30873107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 52250359 - 52250201
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  52250359 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcga 52250260  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | | || | |||||  ||||||||||||||| || ||||||||||    
T  52250259 ccatgtagtcccatacctacaaggcctcatgatccctctcattccggtg-tgattcggtt 52250201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 16451926 - 16452075
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  16451926 cacgcttaactgtggagttcttatggaatgaactaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagctttccttcaa 16452025  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| | | | | || | |||||| |||||||||||||||||||    
T  16452026 ccatgtagtcccctacctacaaggcctcaggatccctctcattccgatgt 16452075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 16461079 - 16461228
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  16461079 cacgcttaactgtggagttcttatggaatgaactaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagctttccttcaa 16461178  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| | | | | || | |||||| |||||||||||||||||||    
T  16461179 ccatgtagtcccctacctacaaggcctcaggatccctctcattccgatgt 16461228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 43057058 - 43057215
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||  |||||| |    
T  43057058 cacgcttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttctaagccttccttcaa 43057157  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | | |||| ||| || ||||| ||||||| |||| ||||||||||    
T  43057158 ccatgtagtcacatacctacacggccttaggatccc-ctcattctgatg-tgattcggtt 43057215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 46693728 - 46693878
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||| ||||  |||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||||  |||||| |    
T  46693728 cacgcttaactgtggagttattatgaaatgagataccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataagccttccttcaa 46693827  T
Q  149 ccat-ggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||   |||| ||| |||||||||||| || |||||||||||||||||||    
T  46693828 ccatcacagtcccatacatgcacgaccttaggatccctctcattccgatgt 46693878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 20056808 - 20056898
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  20056808 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattctcataagc 20056898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 54 - 138
Target Start/End: Original strand, 20060337 - 20060422
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  20060337 cttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 20060422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 214
Target Start/End: Complemental strand, 12883678 - 12883513
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    |||| ||||||||||||||| |||| |||||||||||| ||| ||| ||||||||||||||||||||| ||| ||||||||||||||||| | ||||||     
T  12883678 acacacttaactgtggagtttttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagtattccttca 12883579  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    | |||| |||| ||| | |||||  |||| | |||| |||||||||| || |||||||||| |||||    
T  12883578 atcatgcagtcccatacctgcacagcctcgggatccatctcattccggtg-tgattcggttcgtcta 12883513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 55 - 198
Target Start/End: Complemental strand, 2328463 - 2328319
Alignment:
Q  55 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 153  Q
    ||||||||||||||||||| ||||| |||||| ||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| ||||||    
T  2328463 ttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaaccatg 2328364  T
Q  154 gagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
     |||| ||| | || ||| ||||| |||  |||||||||| ||||    
T  2328363 cagtcccatacctgtacggcctcataatttctctcattccaatgt 2328319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 51372867 - 51372970
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||| |||  |||||||||||||||||  |||||| |    
T  51372867 cacgcttaactgtggagttcttatggaatgagctaccgaaaataagatgcatcttgtcgatataggtagtactaaacaattcttataagccttccttcaa 51372966  T
Q  149 ccat 152  Q
    ||||    
T  51372967 ccat 51372970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 51 - 198
Target Start/End: Original strand, 31822657 - 31822805
Alignment:
Q  51 acgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 149  Q
    ||||||||||||||||||||| | || ||||||||||||| |||||||||| ||||||||||| || ||| |||| |||||||||||    |||||| ||    
T  31822657 acgcttaactgtggagttcttttggattgagctaccgaaaagaagatgcatattgttgatatatgtagtaccaaataattcttataaatcttccttcaac 31822756  T
Q  150 catggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    |||| |||||||| | | |||| |||||  ||||||||||||| |||||    
T  31822757 catgtagtctcatacctacacggcctcatgatccctctcattctgatgt 31822805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 50003068 - 50003226
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||| ||||||| | ||||||||||| |||| ||||||||||||||||||||||||| ||| | ||||||| |||||||    ||||  |    
T  50003068 cacgcttaactgtgaagttcttttggaatgagctactgaaaagaagatgcatcttgttgatataggtagtacccaacaattattataagtctccctttaa 50003167  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| ||||  || | |||| | |||||| |||||||||||||||||| ||||||||||    
T  50003168 ccatgcagtcctatacctgcatggcctcaggatccctctcattccgatg-tgattcggtt 50003226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 16907388 - 16907245
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    |||||||||||| |||||||||| |||||||  | || |||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||  || |||     
T  16907388 acacgcttaactatggagttcttgtagaatggaccactgaaaagaagatgtatcttgttgatataggtagtaccaaacaattcttataagccttctttca 16907289  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcatt 191  Q
    |||||| ||| |||| | |||||   |||| |||||||||||||    
T  16907288 accatgcagtttcatacctgcacagtctcaaaatccctctcatt 16907245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 12728142 - 12728056
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggt-atcaaacaattcttataag 137  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||  || | |||||||||||||||||    
T  12728142 gcttaactgtggagttcttatggaatgtgctaccgaaaagaagatgcatcttgttgatataggcagtaaccaaacaattcttataag 12728056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 23180883 - 23180734
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaa-agaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||| |||||| ||||||| ||||| |||| |||| ||||||| |||||||||||||||||| ||| ||| |||||||||||| || |||||| |    
T  23180883 cacgcttaattgtggaattcttatggaatgggctagcgaatagaagatacatcttgttgatataggtagtaccaagcaattcttataatcattccttcaa 23180784  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||| | |||| ||| | | |||| | |||  |||||||||||||| ||||    
T  23180783 ccacgtagtcccattcctacacggcttcaagatccctctcattccaatgt 23180734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 7548243 - 7548070
Alignment:
Q  51 acgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 149  Q
    |||||||| ||||||||||||||  |||| |||||| ||| ||| ||||||||||||||||||| |  || ||||||||| |||||||   |||||  |     
T  7548243 acgcttaattgtggagttcttatcaaatgggctaccaaaaagaatatgcatcttgttgatatagttaataccaaacaatttttataagtcttcctttaat 7548144  T
Q  150 catggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtctaagttgtcagg 224  Q
    |||| |||||||| | | |||| |||||  |||||||||||| | ||| |||||| ||||||| |||||||||||    
T  7548143 catgtagtctcatacctacacggcctcatgatccctctcattgcaatg-tgattcagtttgtcgaagttgtcagg 7548070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 52250696 - 52250641
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttg 104  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  52250696 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttg 52250641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 52251033 - 52250978
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttg 104  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  52251033 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttg 52250978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 312
Target Start/End: Original strand, 7096886 - 7096933
Alignment:
Q  265 attgaccgatgctctatctttgtcgtgatggttctcccactcgggctt 312  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  7096886 attgactgatgctctatctctgtcgtgatggttctcccactcgggctt 7096933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 208
Target Start/End: Complemental strand, 10820702 - 10820587
Alignment:
Q  92 aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 191  Q
    |||||| ||||| ||||||||||| ||| ||||||||||||||||    |||||| |||||| ||||  || ||| |||  ||||| ||||||||||| |    
T  10820702 aagatgtatcttattgatataggtagtaccaaacaattcttataaatcttccttcaaccatgtagtccaatacatacaccgcctcataatccctctcact 10820603  T
Q  192 ccgatgttgattcggtt 208  Q
    |||||| ||||||||||    
T  10820602 ccgatg-tgattcggtt 10820587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 16440576 - 16440660
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    ||||||| || |||| ||||||||||||||||| ||| ||| ||||||||||||| ||| ||| ||| |||||| ||||||||||    
T  16440576 cttaactttgaagttattatagaatgagctaccaaaaagaatatgcatcttgttgttatcggtagtagcaaacagttcttataag 16440660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 210
Target Start/End: Original strand, 16410721 - 16410877
Alignment:
Q  55 ttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 153  Q
    |||||| || ||||||| ||||||  |||||| |||  |||||||||||||||| ||| ||| |||  ||| |||||||||||||  |||||| || |||    
T  16410721 ttaactttgaagttcttctagaataggctaccaaaaacaagatgcatcttgttggtattggtagtagtaaataattcttataagctttccttcaacaatg 16410820  T
Q  154 gagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttg 210  Q
     | || ||| |   ||||| ||||||||||||||||||| || ||| ||| ||||||    
T  16410821 cattcccatactcacacgatctcagaatccctctcattctgaagttaatttggtttg 16410877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 209
Target Start/End: Complemental strand, 2634580 - 2634459
Alignment:
Q  88 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaat-ccctc 186  Q
    |||||||||||||||||||  ||||| | ||| ||||||||||||  ||||  |||||  | |||| | |||||| ||| ||| ||||||| || |||||    
T  2634580 aaagaagatgcatcttgtttgtatagctagtaccaaacaattcttgcaagccttcctttaatcatgcaatctcatacatacacaacctcaggatcccctc 2634481  T
Q  187 tcattccgatgttgattcggttt 209  Q
    ||||| ||||| |||||||||||    
T  2634480 tcatttcgatg-tgattcggttt 2634459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 7584410 - 7584358
Alignment:
Q  266 ttgaccgatgctctatctttgtcgtgatggttctcccactcgggcttggcata 318  Q
    |||||| ||||||||||| || ||||| |||||||||||||| |||| |||||    
T  7584410 ttgaccaatgctctatctctgccgtgacggttctcccactcgagcttcgcata 7584358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 31823097 - 31823161
Alignment:
Q  70 ttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattctta 133  Q
    |||| |||||||||||| ||| |||||||||| || ||||||||||| ||| |||| ||||||||    
T  31823097 ttatggaatgagctaccaaaaagaagatgcattttattgatataggtagtaccaaataattctta 31823161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 7e-43; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 30966843 - 30966695
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  30966843 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatccttccttcaa 30966744  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatg 197  Q
    ||||| |||| ||| |||| ||| |||||| ||||||||||||||||||    
T  30966743 ccatgcagtcccatacatgtacggcctcaggatccctctcattccgatg 30966695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 49 - 241
Target Start/End: Complemental strand, 33175112 - 33174918
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    |||||||||||||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  ||||||     
T  33175112 acacgcttaactgtggagttcttatgaaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttca 33175013  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtct--aagttgtcaggtaccactcattatcatg 241  Q
    |||||| |||| ||| | | |||| |||||| |||||||||||||||||| |||||||| ||||||  |||||||| ||  ||||||||| |||||    
T  33175012 accatgtagtcccatacctacacggcctcaggatccctctcattccgatg-tgattcggcttgtctagaagttgtcgggagccactcattgtcatg 33174918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 24818479 - 24818330
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||  |||||||||||||||||  |||||  |    
T  24818479 cacgcttaactgtggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagccttccttgaa 24818380  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| |||||||| |||||| |||||||||||||||||||    
T  24818379 ccatgcagtcccatacatgcacggcctcaggatccctctcattccgatgt 24818330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 16379090 - 16378945
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| |||||||||||||| ||||||   |||||| |    
T  16379090 cacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcgtataagacttccttcaa 16378991  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||||| |||||||| | |||||| |||| |||||||||||||||||    
T  16378990 ccatgcagtctcatacttgcacggcctcggaatccctctcattccg 16378945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 41754442 - 41754297
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||  |||||| |    
T  41754442 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataagccttccttcaa 41754343  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||||| |||||||| | |||||| |||||  | |||||||||||||    
T  41754342 ccatgcagtctcatacctgcacggcctcaagaaccctctcattccg 41754297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 53 - 208
Target Start/End: Original strand, 18098874 - 18099029
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 151  Q
    |||||||| |||||||||||| |||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||| ||||    
T  18098874 gcttaactatggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaacca 18098973  T
Q  152 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    || |||||||| | | |||| |||||| || ||||||||||||||| ||||||||||    
T  18098974 tgtagtctcatacctacacggcctcaggattcctctcattccgatg-tgattcggtt 18099029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 30966387 - 30966239
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  30966387 cacgcttaactatggagttcttatggaatgagataccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 30966288  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatg 197  Q
    ||||| |||| ||| | || ||| |||||| ||||||||||||||||||    
T  30966287 ccatgcagtcccatacctgtacggcctcaggatccctctcattccgatg 30966239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 25434049 - 25434207
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||| |||||| ||||| |||||||||||||||||| |||| ||||||||||||||||||||||  |||||| |    
T  25434049 cacgcttaactgtggagttcttatggaatgggctaccagaaaggagatgcatcttgttgataaaggttgtatcaaacaattcttataagccttccttcaa 25434148  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| |  ||||| |||||| ||||||||||||||| || ||||||||||    
T  25434149 ccatgaagtcccataccagcacggcctcaggatccctctcattccggtg-tgattcggtt 25434207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 194
Target Start/End: Original strand, 25337990 - 25338135
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  25337990 cacgcttaactgtggagttcttatgaaatgagctatcgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 25338089  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||||| |||| ||| | ||||||||||||| | |||||||||||||    
T  25338090 ccatgcagtcccatacctgcacgacctcaggaaccctctcattccg 25338135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 29804835 - 29804686
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||   ||||| |    
T  29804835 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcctgccttcaa 29804736  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | | || | |||||| |||||||||||||||||||    
T  29804735 ccatgtagtcccatacctacaaggcctcaggatccctctcattccgatgt 29804686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 11388340 - 11388184
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || |||||| |||||| |    
T  11388340 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt-ttttaagcattccttcaa 11388242  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||||||| | | |||| | |||| || ||||||||||||||| ||||||||||    
T  11388241 ccatgtagtctcatacctacacggcatcaggat-cctctcattccgatg-tgattcggtt 11388184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 1912677 - 1912529
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 149  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||     | ||| ||    
T  1912677 cacgcttaactgtggagttcttatggaatgggctaccaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaatctactttcaac 1912578  T
Q  150 catggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    |||| |||||||| | | ||  ||||||| |||||||||||||||||||    
T  1912577 catgtagtctcatacctacataacctcaggatccctctcattccgatgt 1912529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 49 - 208
Target Start/End: Complemental strand, 16379547 - 16379388
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    ||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||||||||| ||||||   ||||||     
T  16379547 acacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcgtataagtcttccttca 16379448  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    |||||| |||| ||| | |||||| |||| | |||||||||||||| || |||||||||||    
T  16379447 accatgcagtcccatacctgcacggcctcgggatccctctcattccaat-ttgattcggtt 16379388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 50 - 214
Target Start/End: Complemental strand, 33174656 - 33174494
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||| ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  33174656 cacgcttaactgcggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 33174557  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    |  || |||| ||| | | |||| | |||| |||||||||||||||||| |||||||||| |||||    
T  33174556 c--tgtagtcccatacctacacggcatcaggatccctctcattccgatg-tgattcggttcgtcta 33174494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 5399810 - 5399959
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||| || ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||   ||||  |    
T  5399810 cacgcttaactatgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttaaa 5399909  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||  | || ||| | ||||||||||||  |||||||||||||||||||    
T  5399910 ccatacactcccatacttgcacgacctcaagatccctctcattccgatgt 5399959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 8256679 - 8256570
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  8256679 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 8256580  T
Q  149 ccatggagtc 158  Q
    ||||| ||||    
T  8256579 ccatgtagtc 8256570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 83171 - 83028
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    |||||||||||||| |||||||||| |||||||||||| ||| || ||| |||||||||| ||||||| ||| ||||| |||||||||||||  |||||     
T  83171 acacgcttaactgtagagttcttatggaatgagctaccaaaaaaaagattcatcttgttggtataggtagtaccaaacgattcttataagcataccttca 83072  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcatt 191  Q
    |||||| |||||||| | ||||| | ||||| ||||||||||||    
T  83071 accatgtagtctcatacctgcacaatctcaggatccctctcatt 83028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 50 - 241
Target Start/End: Original strand, 38898905 - 38899098
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||||||||  |||| | |||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||||||| ||||||| |    
T  38898905 cacgcttaactgtggagttcttatgaaatgtgttaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagctctccttcaa 38899004  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtct--aagttgtcaggtaccactcattatcatg 241  Q
    ||||| ||||| || | | |||| |||||  ||| ||||| |||||||| ||||| || ||||||  |||||||| ||  ||||||||| |||||    
T  38899005 ccatgtagtctgatacctacacggcctcaagatcactctccttccgatg-tgatttggcttgtctagaagttgtcgggagccactcattttcatg 38899098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 138
Target Start/End: Complemental strand, 33771151 - 33771065
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  33771151 gcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 33771065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 88 - 209
Target Start/End: Complemental strand, 1953269 - 1953149
Alignment:
Q  88 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 187  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||||| |   |||||| |||||| |||||||| | |||||||| |||| ||||||||    
T  1953269 aaagaagatgcatctagttgatataggtagtaccaaacaattcttataggtcttccttcaaccatgcagtctcatacctgcacgacttcaggatccctct 1953170  T
Q  188 cattccgatgttgattcggttt 209  Q
    |||||||||| |||||||||||    
T  1953169 cattccgatg-tgattcggttt 1953149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 29259613 - 29259762
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||| || |||||||||  ||||||||||||||| |||||||||||||||||||||| || ||| ||||||||| | ||||||  |||||| |    
T  29259613 cacgcttaactatgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattttaataagccttccttcaa 29259712  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | || |||  ||||| |||||||||||||||||||    
T  29259713 ccatgcagtcccatacttgtacggtctcaggatccctctcattccgatgt 29259762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 191
Target Start/End: Original strand, 27882918 - 27883061
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctac-cgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    |||||||||| |||||||||||||| ||| |  ||||   |||||||||||||||| ||||||||| |  || ||||||||||||||||||| ||||||     
T  27882918 acacgcttaattgtggagttcttatggaacggcctacaaaaaagaagatgcatcttattgatatagataataccaaacaattcttataagcattccttca 27883017  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcatt 191  Q
    || ||| |||||||| |||||||| |||||| ||||||||||||    
T  27883018 acaatgcagtctcatacatgcacggcctcaggatccctctcatt 27883061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 11394686 - 11394575
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||| || |||||| |||||| |    
T  11394686 cacgcttaactgtgaagttcttatggaat-agctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt-ttttaagcattccttcaa 11394589  T
Q  149 ccatggagtctcat 162  Q
    ||||| ||||||||    
T  11394588 ccatgtagtctcat 11394575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 208
Target Start/End: Complemental strand, 1707195 - 1707037
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    |||| ||||||||||||||||||||   ||| |||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||   ||||||     
T  1707195 acactcttaactgtggagttcttatgagatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttca 1707096  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    | |||| |||||||| | | |||   ||||| || ||||||||||||||| ||||||||||    
T  1707095 atcatgtagtctcatacctacacagtctcaggat-cctctcattccgatg-tgattcggtt 1707037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 15620051 - 15619902
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||| |||||||||||||| || || | | ||  |||||||||| ||||||||||||||||| ||| ||||||||||||||||||   ||||| |    
T  15620051 cacgcttaattgtggagttcttatggattgggtttccaaaaagaagatgtatcttgttgatataggtagtaccaaacaattcttataagcttgccttcaa 15619952  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    | ||| |||||||| | |||||| | || | ||||||||||||| |||||    
T  15619951 ctatgcagtctcatacttgcacggcatcgggatccctctcattctgatgt 15619902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 50 - 193
Target Start/End: Original strand, 30963713 - 30963857
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||| |||| |  || |||||| ||||||||||||||||||||||||||||| | | || ||||||||||||||   |||||| |    
T  30963713 cacgcttaactgtggagttattatggtttgggctaccagaaagaagatgcatcttgttgatataggtagaaccatacaattcttataagttttccttcaa 30963812  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattcc 193  Q
    ||||| | |||| | | |||||| | |||  ||||||||||||||    
T  30963813 ccatgcattctcttacctgcacggcttcatgatccctctcattcc 30963857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 20502175 - 20502050
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 149  Q
    |||| |||| |||| |||||||||  |||| |||||| ||| |||| |||||||||||||||||   ||| ||||||||||||||||||  |||||| ||    
T  20502175 cacgtttaattgtgaagttcttatgaaatgggctaccaaaaaaagaagcatcttgttgatatagaaagtaccaaacaattcttataagccttccttcaac 20502076  T
Q  150 catggagtctcatgcatgcacgacct 175  Q
    |||| |||| ||| | ||||||||||    
T  20502075 catgcagtcccatacttgcacgacct 20502050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 8074042 - 8073957
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    ||||| || ||||||||||||  |||| |||||  ||||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  8074042 gcttatctatggagttcttatgaaatgggctacaagaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataag 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 18447954 - 18448069
Alignment:
Q  92 aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 191  Q
    ||||||||||||||||||| | || ||| |||||||||||||||||   | |||| |||||| |||| ||| | | |||| |||||| |||||| |||||    
T  18447954 aagatgcatcttgttgatacaagtagtaccaaacaattcttataagtcttacttcaaccatgtagtcacatacctacacggcctcaggatccctatcatt 18448053  T
Q  192 ccgatgttgattcggtt 208  Q
    |||||| ||||||||||    
T  18448054 ccgatg-tgattcggtt 18448069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 13191121 - 13191039
Alignment:
Q  56 taactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    ||||| ||||||||||||| ||||  ||||| ||| ||||||||||||||||| |||| || ||| |||||||||||||||||    
T  13191121 taactatggagttcttataaaatggactaccaaaaagaagatgcatcttgttggtatatgtagtaccaaacaattcttataag 13191039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 30963299 - 30963345
Alignment:
Q  92 aagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||    
T  30963299 aagatgcatcttgttgatataggtagtacctaacaattcttataagc 30963345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 30961876 - 30961964
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaagaag-atgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    |||| ||||||||||||||||||| |  |  |||||||||| ||  ||||||||||||||||||||| ||| ||| ||| |||||||||    
T  30961876 cacgtttaactgtggagttcttatggtttcggctaccgaaaaaaatatgcatcttgttgatataggtagtaccaatcaaatcttataag 30961964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 15639848 - 15639798
Alignment:
Q  88 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    |||||||||| || |||||||||||||| ||| |||||||||| |||||||    
T  15639848 aaagaagatgtatgttgttgatataggtagtaccaaacaattcctataagc 15639798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 32377712 - 32377749
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctaccgaaa 90  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  32377712 gcttaactgtggagttcttttggaatgagctaccgaaa 32377749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 10845036 - 10844878
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  10845036 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 10844937  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  10844936 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 10844878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 22026532 - 22026374
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  || ||| |    
T  22026532 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttcattcaa 22026433  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||||| |||||  | ||||||||||||| || ||||||||||    
T  22026432 ccatgcagtcccatacctgcacggcctcacgaaccctctcattccggtg-tgattcggtt 22026374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 27926052 - 27925894
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  27926052 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatccttccttcaa 27925953  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  27925952 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 27925894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 2044211 - 2044062
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||| |||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||||||||||||||||||||||  |||||| |    
T  2044211 cacgcttaactgtggagttattatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtatcaaacaattcttataagccttccttcaa 2044112  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||||||| | | |||  |||||| |||||||||||||||||||    
T  2044111 ccatgtagtctcatacctacacagcctcaggatccctctcattccgatgt 2044062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 49 - 208
Target Start/End: Original strand, 41659097 - 41659256
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    |||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   ||||||     
T  41659097 acacgcttaactgtggagttcttatgtaatgagctatcgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttca 41659196  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    |||||| |||| ||| | |||||||| |||| | ||||||||||||| || ||||||||||    
T  41659197 accatgcagtcccatacctgcacgacatcaggaaccctctcattccggtg-tgattcggtt 41659256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 50 - 194
Target Start/End: Original strand, 10844608 - 10844753
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| ||||||| ||||||||||  |||||| |    
T  10844608 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaactcttataagccttccttcaa 10844707  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||||| |||| ||| | |||| | |||||| | |||||||||||||    
T  10844708 ccatgcagtcccatacctgcaaggcctcaggaaccctctcattccg 10844753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 50 - 194
Target Start/End: Original strand, 12827247 - 12827392
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  12827247 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 12827346  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||| | |||| ||| | | || | |||||| |||||||||||||||    
T  12827347 ccaagtagtcccatacctacaaggcctcaggatccctctcattccg 12827392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 17103234 - 17103086
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||  ||| |||||||||||||||||   |||||| |    
T  17103234 cacgcttaaccgtggagttcttatggaatgagctaccgaaaagaagatgcagcttgttgatataggcagtaccaaacaattcttataagtcttccttcaa 17103135  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatg 197  Q
    ||||| |||||||| | || ||| |||||| ||| ||||||||||||||    
T  17103134 ccatgcagtctcatacctgtacggcctcaggatctctctcattccgatg 17103086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 22548988 - 22549146
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| |    
T  22548988 cacgcttaactgtggagtttttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaa 22549087  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||||  |||||| |  |||||||||||| || ||||||||||    
T  22549088 ccatgcagtcacatacctgcacagcctcaggaagcctctcattccggtg-tgattcggtt 22549146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 32292550 - 32292392
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||| |||| | ||| ||||||||| ||||||||||||| | ||| ||||||||||||||||||| |||||| |    
T  32292550 cacgcttaactgtggagttcttatggaatgggctagcaaaaagaagatgcaacttgttgatatagatagtaccaaacaattcttataagcattccttcaa 32292451  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  32292450 ccatgcagtcccatacttgcacggcctcaggaaccctctcattccggtg-tgattcggtt 32292392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 194
Target Start/End: Original strand, 22548542 - 22548687
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||    |||||| |    
T  22548542 cacgcttaactgtggagttattatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaaacttccttcaa 22548641  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||||| |||| ||| | |||||  |||||| | |||||||||||||    
T  22548642 ccatgcagtcacatacctgcacagcctcaggaaccctctcattccg 22548687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 28453491 - 28453346
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||| |||||||||| ||||| ||||||  ||||||||||||||||||| |||||||| |||| ||||||||||||||||   || ||| |    
T  28453491 cacgcttaactgtagagttcttatggaatgggctaccataaagaagatgcatcttgttaatataggtagtataaaacaattcttataagttttctttcaa 28453392  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||||| |||||||| | ||||||||||| | |||||||||||||||    
T  28453391 ccatgaagtctcatacctgcacgacctcgggatccctctcattccg 28453346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 34308472 - 34308621
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||| |||||||||||||| ||||  |||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||  |||||| |    
T  34308472 cacgcttaagtgtggagttcttatggaataggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacagttcttataagccttccttcaa 34308571  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||  |||||||| | || ||| |||||| |||||| ||||||||||||    
T  34308572 ccatacagtctcatacttgtacggcctcaggatccctttcattccgatgt 34308621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 8080335 - 8080484
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||| ||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||| |||  |||||| |    
T  8080335 cacgcttaactgtgaagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttatcagctttccttcaa 8080434  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | | |||| | |||| |||||||||||||||||||    
T  8080435 ccatgtagtcccatacctacacggcttcaggatccctctcattccgatgt 8080484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 25144925 - 25144836
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  25144925 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgctgatataggtagtaccaaacaattcttataagc 25144836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 25147689 - 25147576
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||| |||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | | ||||||||||||||||||  |||||| |    
T  25147689 cacgattaactatggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagcaccaaacaattcttataagccttccttcaa 25147590  T
Q  149 ccatggagtctcat 162  Q
    ||||| ||||||||    
T  25147589 ccatgcagtctcat 25147576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 27022331 - 27022480
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||||||| ||||||  ||||||||| |||||||||||||| ||| ||||||||||||||||||  || ||| |    
T  27022331 cacgcttaactgtggagttcttatggaatgagctgccgaaaataagatgcatgttgttgatataggtagtaccaaacaattcttataagccttctttcaa 27022430  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | | || | |||||  |||||||||||||||||||    
T  27022431 ccatgtagtcccatacctacatggcctcaagatccctctcattccgatgt 27022480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 209
Target Start/End: Original strand, 27819238 - 27819398
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    |||| ||||||||||||||| |||| ||||||||||  |||| |||||||||| |||||||||||||| ||| |||||||||||||| |||  ||||||     
T  27819238 acacacttaactgtggagtttttatggaatgagctattgaaaagaagatgcattttgttgatataggtagtaccaaacaattcttattagccttccttca 27819337  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggttt 209  Q
    |||||| |||||||| | |||| ||| |||  ||||||||||||| |||| |||||||||||    
T  27819338 accatgaagtctcatacttgcatgacttcatgatccctctcattctgatg-tgattcggttt 27819398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 34308928 - 34309081
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata----ggtggtatcaaacaattcttataagcactcct 144  Q
    |||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||||||||||    ||| ||| |||||| |||||||||||  ||||    
T  34308928 cacgcttaactgtggagttcttatggaataggctaccgaaaagaagatgcatcttgttgatatatataggtagtaccaaacagttcttataagccttcct 34309027  T
Q  145 tctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    || |||||  |||||||| | || ||| |||||| |||||||||||||||||||    
T  34309028 tcaaccatacagtctcatacttgtacggcctcaggatccctctcattccgatgt 34309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 41 - 191
Target Start/End: Original strand, 28375038 - 28375189
Alignment:
Q  41 gaattcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagca 139  Q
    |||||||  ||||||||||| || || | |||| ||| |||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||||||||||     
T  28375038 gaattcaagcacgcttaactatgaagctgttatggaaagagctaccgaaaagaagatgcatcttgttgatgtaggtagtaccaaacaattcttataagcc 28375137  T
Q  140 ctccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 191  Q
     |||||| | |||| |||||||| | |||||| |||||| ||||||||||||    
T  28375138 ttccttcaatcatgcagtctcatacctgcacggcctcaggatccctctcatt 28375189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 6464903 - 6465052
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||| |||| |||||||||||| ||| ||| ||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  6464903 cacgcttaactgtggagttgttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 6465002  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||  ||| | | |||| |||||  || ||||||||||| ||||    
T  6465003 ccatgtagttccatacctacacggcctcatgattcctctcattccaatgt 6465052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 192
Target Start/End: Complemental strand, 25148120 - 25147977
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||   | ||||||||||||||||||  |||||| |    
T  25148120 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtaagaccaaacaattcttataagccttccttcaa 25148021  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattc 192  Q
    | |   |||| ||| | | ||||||||| | |||||||||||||    
T  25148020 cgacacagtcccatacctacacgacctcgggatccctctcattc 25147977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 12100844 - 12100731
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||| |||||||||  ||||||||||||||| ||||||||||||| ||||||||||| ||| ||||||| ||||||||||   ||||| |    
T  12100844 cacgcttaactgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttattgatataggtagtaccaaacaaatcttataagcttgccttcaa 12100745  T
Q  149 ccatggagtctcat 162  Q
    ||||| ||||||||    
T  12100744 ccatgcagtctcat 12100731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 190
Target Start/End: Original strand, 21316106 - 21316243
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 152  Q
    ||||||||||||||||||||  |||||||||| |||| || |||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||  |||||    
T  21316106 cttaactgtggagttcttatgaaatgagctactgaaaagacgatgcatcttgttgatataggtagtaccaaacaattcttttaagcgctcatttaaccat 21316205  T
Q  153 ggagtctcatgcatgcacgacctcagaatccctctcat 190  Q
      |||||||| | |||||| ||| || |||||||||||    
T  21316206 acagtctcatacctgcacggccttaggatccctctcat 21316243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 58 - 198
Target Start/End: Original strand, 22840530 - 22840671
Alignment:
Q  58 actgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggag 156  Q
    |||||||||||||||| |||||||||| | ||| ||||||||||||||||||||||| | ||| |||||||||||||||||   || ||| |||||| ||    
T  22840530 actgtggagttcttatggaatgagctaacaaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataagtcttcattcgaccatgtag 22840629  T
Q  157 tctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    |||||| | | ||   |||||| ||| |||||||||||||||    
T  22840630 tctcatacctacaaagcctcaggatctctctcattccgatgt 22840671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 33852251 - 33852394
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||| |||| ||||||||| ||||| |||||| ||| |||||| ||||||||| |||||||| ||| |||||||||||||||||   |||||| |    
T  33852251 cacgcttaattgtgaagttcttatggaatgggctaccaaaaagaagatacatcttgttaatataggtagtaccaaacaattcttataagttttccttcaa 33852350  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattc 192  Q
    ||||  |||||||| | ||||||  ||| | |||||||||||||    
T  33852351 ccatacagtctcatacctgcacggtctcgggatccctctcattc 33852394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 41913123 - 41913034
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    |||||||||||| ||||||||||| ||||| |||||| ||| ||||| ||||||||||||||||||| | | ||||||||||||||||||    
T  41913123 cacgcttaactgcggagttcttatggaatgggctaccaaaaagaagacgcatcttgttgatataggtagcaccaaacaattcttataagc 41913034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 27021911 - 27022015
Alignment:
Q  88 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 187  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||||||  |||||| |||||| ||||| || | | || | |||||| ||||||||    
T  27021911 aaagaagatgcatcttgttgatataagtagtaccaaacaattcttataagccttccttcaaccatgcagtcttatacctacatggcctcaggatccctct 27022010  T
Q  188 cattc 192  Q
    |||||    
T  27022011 cattc 27022015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 203
Target Start/End: Complemental strand, 3745254 - 3745100
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||| ||||||||||| |||| ||||| |||||| ||| |||||||||| |||||| ||||||| |||  ||||| ||||||||||   |||||| |    
T  3745254 cacgcttgactgtggagttattatggaatgggctaccaaaaagaagatgcatattgttggtataggtagtactaaacagttcttataagttttccttcaa 3745155  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgatt 203  Q
    ||||| ||||    || |||||||||| || |||||||||||| |||||| ||||    
T  3745154 ccatgtagtccttagcctgcacgaccttaggatccctctcatttcgatgtggatt 3745100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 189
Target Start/End: Complemental strand, 1297161 - 1297020
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    |||| ||||||| ||||||||||||| |||| | |||||||| ||| ||  ||||||||| ||||||| ||| |||||||||||||||||   | ||||     
T  1297161 acacacttaactatggagttcttatataatgggataccgaaaagaatataaatcttgttggtataggtagtaccaaacaattcttataagttttacttca 1297062  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctca 189  Q
    |||||| |||||||| | |||| || ||||||| ||||||||    
T  1297061 accatgcagtctcatacctgcatgatctcagaacccctctca 1297020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 162
Target Start/End: Original strand, 15819014 - 15819121
Alignment:
Q  55 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 153  Q
    ||||||||| ||||||||| ||||| |||||||||| ||||||||||| |||||||||| || ||| ||||||||| || |||||| |||||| ||||||    
T  15819014 ttaactgtg-agttcttatggaatgtgctaccgaaaagaagatgcatcatgttgatatatgtagtaccaaacaatttttctaagcattccttcaaccatg 15819112  T
Q  154 gagtctcat 162  Q
      |||||||    
T  15819113 ttgtctcat 15819121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 31283648 - 31283719
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaa 124  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||||| ||| ||||    
T  31283648 cttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttaatataggtagtaccaaa 31283719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 198
Target Start/End: Original strand, 15567548 - 15567698
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    ||||| ||||||| |||||||||||  ||||| ||||| ||| ||||||| ||||||||| |||| || || |||||||||||||||||||  ||||||     
T  15567548 acacgattaactgcggagttcttatgaaatgaactaccaaaaagaagatgtatcttgttggtatatgtagtgtcaaacaattcttataagccttccttcc 15567647  T
Q  148 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||||  |||| || | ||| |||  |||  ||| |||||||||||||||    
T  15567648 accatgatgtctaatacttgcgcgatgtcaagatctctctcattccgatgt 15567698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 30527479 - 30527563
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    ||||||||||||||||||||  |||| |||||| ||| ||||||| ||||| ||||| || |||||| |||||||||||||||||    
T  30527479 cttaactgtggagttcttatgaaatgggctacccaaaagaagatgtatcttattgatgtaagtggtaccaaacaattcttataag 30527563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 3744788 - 3744657
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 151  Q
    |||||| ||| ||||||||||  |||| |||||| ||| |||| ||||| |||||| ||||||| || ||||||||||||||||||   |||||| ||||    
T  3744788 gcttaattgtagagttcttatgaaatgtgctaccaaaaagaaggtgcatattgttggtataggtagtgtcaaacaattcttataagtcttccttcaacca 3744689  T
Q  152 tggagtctcatgcatgcacgacctcagaatcc 183  Q
    || |||| ||| | | |||||||||| |||||    
T  3744688 tgcagtcccatacctacacgacctcaaaatcc 3744657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 193
Target Start/End: Complemental strand, 22705282 - 22705181
Alignment:
Q  92 aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 191  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| |  |||||| | |||  |||| ||| | | |||| | |||| ||||||||||||    
T  22705282 aagatgcatcttgttgatataggtagtaccaaacaattcttataacccttccttcaatcatccagtcccatacctacacggcttcaggatccctctcatt 22705183  T
Q  192 cc 193  Q
    ||    
T  22705182 cc 22705181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 25307914 - 25307855
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatatag 113  Q
    |||||||||||||||||||| |||||| |||||| ||| |||||| |||||||||||||||    
T  25307914 gcttaactgtggagttcttacagaatgggctacc-aaaaaagatgtatcttgttgatatag 25307855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 30334940 - 30334989
Alignment:
Q  88 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    |||||||||| ||||||||| ||||||| ||||||||||||| |||||||    
T  30334940 aaagaagatgtatcttgttggtataggtagtatcaaacaatttttataag 30334989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 6466820 - 6466775
Alignment:
Q  92 aagatgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||||    
T  6466820 aagatgcatcttgttggtataggtagtaccaaacaatttttataag 6466775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 15568041 - 15568086
Alignment:
Q  92 aagatgcatcttgttgatataggtggtatcaaacaattcttataag 137  Q
    ||||||||||||||||||||||||  || ||||||||| |||||||    
T  15568041 aagatgcatcttgttgatataggtcataccaaacaattgttataag 15568086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 10453 - 10304
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||  |||||||||||||||||  |||||  |    
T  10453 cacgcttaactgtggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagccttccttgaa 10354  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| |||||||| |||||| |||||||||||||||||||    
T  10353 ccatgcagtcccatacatgcacggcctcaggatccctctcattccgatgt 10304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 5e-41; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 50 - 214
Target Start/End: Original strand, 20896681 - 20896845
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20896681 cacgcttaaccgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20896780  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    ||||| |||||||| | | |||| ||| || |||||||||||||||||| |||||||| |||||||    
T  20896781 ccatgtagtctcatacctacacggcctaaggatccctctcattccgatg-tgattcggcttgtcta 20896845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 50 - 196
Target Start/End: Complemental strand, 13492942 - 13492795
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||||  |||||| |    
T  13492942 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattattataagccttccttcaa 13492843  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgat 196  Q
    ||||| |||||||| | |||||  |||||| |||| ||||||||||||    
T  13492842 ccatgcagtctcatacctgcacagcctcaggatccttctcattccgat 13492795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 214
Target Start/End: Original strand, 6330905 - 6331069
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||| |||||||||||||| ||| |||||||||||||||||   |||||| |    
T  6330905 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatattgttgatataggtagtaccaaacaattcttataagtcttccttcaa 6331004  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    ||||| |||||||| | | |||| |||||| |||| ||||||||||||| |||||||| |||||||    
T  6331005 ccatgtagtctcatacctacacggcctcaggatccatctcattccgatg-tgattcggcttgtcta 6331069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 16520121 - 16519972
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||| ||||||  |||||| |    
T  16520121 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaaatctcataagccttccttcga 16520022  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||||||| | | |||  |||||| |||||||||||||||||||    
T  16520021 ccatgtagtctcatacctacacagcctcaggatccctctcattccgatgt 16519972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 17027524 - 17027673
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  17027524 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 17027623  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | |||||| |||| | |||||||||||||||||||    
T  17027624 ccatgcagtcccatacctgcacggcctctggatccctctcattccgatgt 17027673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 214
Target Start/End: Complemental strand, 17851071 - 17850907
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| ||| ||||||  |||||| |||| || ||  |    
T  17851071 cacgcttaactgtggagttcttatagaatgggctaccagaaagaagatgcatcttgttgataaaggtagtaccaaacatatcttatcagcattcttttaa 17850972  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    ||||| |||| ||| | ||||||||||||| ||||||||||||||| || |||||||||| |||||    
T  17850971 ccatgcagtcccatacttgcacgacctcaggatccctctcattccggtg-tgattcggttcgtcta 17850907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 20850474 - 20850316
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||  |||||||||||||||||  |||||| |    
T  20850474 cacgcttaactgtagagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacaaaacaattcttataagccttccttcaa 20850375  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||||| |||||  | ||||||||||||| || ||||||||||    
T  20850374 ccatgcagtcccatacctgcacggcctcatgaaccctctcattccggtg-tgattcggtt 20850316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 55 - 208
Target Start/End: Complemental strand, 3652634 - 3652481
Alignment:
Q  55 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 153  Q
    ||||||||||||||||||| |||||| ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||||||  |||||| ||||||    
T  3652634 ttaactgtggagttcttatggaatgaactaccaaaaagaagatgcatcttgttgatataggtagtatcagacaattcttataagccttccttcaaccatg 3652535  T
Q  154 gagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
     |||| ||| | | |||  |||||| |||||||||||||||||| ||||||||||    
T  3652534 tagtcccatacctacacagcctcaggatccctctcattccgatg-tgattcggtt 3652481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 56 - 198
Target Start/End: Complemental strand, 7912025 - 7911882
Alignment:
Q  56 taactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatgg 154  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| ||||||     
T  7912025 taactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagttttccttcaaccatgc 7911926  T
Q  155 agtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||  || | |||||| ||||   |||||||||||||||||||    
T  7911925 agtcctatacctgcacggcctcgagatccctctcattccgatgt 7911882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 50 - 241
Target Start/End: Original strand, 20126175 - 20126368
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||| |||||| ||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||||||||| ||||||||||||  |||||| |    
T  20126175 cacgcttaattgtggaattcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtatcaaaccattcttataagccttccttcaa 20126274  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtct--aagttgtcaggtaccactcattatcatg 241  Q
    ||||| |||||||| | | |||  ||| || |||||||||||||||||| |||||| | ||||||  |||||||||||  || |||||| |||||    
T  20126275 ccatgtagtctcatacctacacagccttaggatccctctcattccgatg-tgattcagcttgtctagaagttgtcaggagccgctcattgtcatg 20126368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 7912463 - 7912314
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||| |||||| |||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||| ||||||   |||||| |    
T  7912463 cacgtttaactatggagttcttatggaatgagctaccgaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcatataagttttccttcaa 7912364  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | |||||| ||||   |||||||||||||||||||    
T  7912363 ccatgcagtcccatacctgcacggcctcgagatccctctcattccgatgt 7912314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 9352215 - 9352066
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||| | |||||||    ||||| |    
T  9352215 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaaatattataagtctcccttcga 9352116  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||||||| | | |||  |||||| |||||||||||| ||||||    
T  9352115 ccatgtagtctcatacctacacagcctcaggatccctctcatttcgatgt 9352066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 13191506 - 13191615
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  13191506 cacgcttaactgtgaagttcttatggaacgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 13191605  T
Q  149 ccatggagtc 158  Q
    ||||| ||||    
T  13191606 ccatgcagtc 13191615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 13492485 - 13492396
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||    
T  13492485 cacgcttaactgtggagttcttatggaattagctaccgaaaagaagatgcatcttgttgatataggtaatatcaaacaattcttataagc 13492396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 17731102 - 17731255
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatct----tgttgatataggtggtatcaaacaattcttataagcactcct 144  Q
    ||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||    ||||||||||||| ||| |||||||||||||||||   ||||    
T  17731102 cacgcttaaatgtggagttcttaaagaatgagctaccgaaaagaagatgcatctatcttgttgatataggtagtaccaaacaattcttataagtcttcct 17731201  T
Q  145 tctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    |  |||||| |||| ||| | || ||| |||||| |||||||||||||||||||    
T  17731202 ttaaccatgcagtcccatacctgaacggcctcaggatccctctcattccgatgt 17731255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 63 - 194
Target Start/End: Complemental strand, 27334301 - 27334169
Alignment:
Q  63 ggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctca 161  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||| |||  ||    
T  27334301 ggagttcttatggaatgagctaccgaaaagaagattcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttcca 27334202  T
Q  162 tgcatgcacgacctcagaatccctctcattccg 194  Q
    | | ||||||||||||| | ||||||| |||||    
T  27334201 tacctgcacgacctcaggaaccctctcgttccg 27334169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 63 - 194
Target Start/End: Complemental strand, 27395041 - 27394909
Alignment:
Q  63 ggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctca 161  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||| |||  ||    
T  27395041 ggagttcttatggaatgagctaccgaaaagaagattcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttcca 27394942  T
Q  162 tgcatgcacgacctcagaatccctctcattccg 194  Q
    | | ||||||||||||| | ||||||| |||||    
T  27394941 tacctgcacgacctcaggaaccctctcgttccg 27394909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 2681209 - 2681367
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||||||   || ||| |    
T  2681209 cacgcttaattgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatgggtagtaccaaacaattcttataagtcttcattcaa 2681308  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||  | | |||| |||||| | ||||||||||||| || ||||||||||    
T  2681309 ccatgcagtcccaaacctacacggcctcaggaaccctctcattccggtg-tgattcggtt 2681367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 54 - 208
Target Start/End: Original strand, 23986314 - 23986468
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 152  Q
    |||||||||| ||||||||| |  ||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||   ||||| |||||    
T  23986314 cttaactgtgaagttcttatggtttgagctaccgaaaagaagatgcatcttgttcatataggtagtaccaaacaattcttataagcctaccttcaaccat 23986413  T
Q  153 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    | |||| ||| | | |||| |||| | |||||||||||||||||| ||||||||||    
T  23986414 gtagtcccatacctacacggcctccggatccctctcattccgatg-tgattcggtt 23986468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 207
Target Start/End: Original strand, 9440306 - 9440459
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 152  Q
    |||||||||| ||||||||| || ||||||||||||| ||| |||||||||||||||||| || ||| | ||||||||||||||||  || ||| |||||    
T  9440306 cttaactgtgaagttcttatggagtgagctaccgaaaagaaaatgcatcttgttgatataagtagtaccgaacaattcttataagctttcattcaaccat 9440405  T
Q  153 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggt 207  Q
    | |||  ||| | |||||||| |||| |||||||||||||||||| |||||||||    
T  9440406 gcagttccatacctgcacgacttcaggatccctctcattccgatg-tgattcggt 9440459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 138
Target Start/End: Complemental strand, 15929736 - 15929646
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||| ||| |||| |||||||||||||    
T  15929736 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcattttgttgatataggtagtaccaaataattcttataagc 15929646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 50 - 214
Target Start/End: Complemental strand, 17851527 - 17851363
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||| |||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||| ||| ||||||  ||||||||||  || ||  |    
T  17851527 cacgcttaattgtggagttcttatagaatgggctaccaaaaagaagatgcatcttgttgataaaggtagtaccaaacatatcttataagccttcttttaa 17851428  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    ||||| |||| ||| | |||||| |||| | ||||||||||||||| || |||||||||| |||||    
T  17851427 ccatgcagtcccatacttgcacggcctcgggatccctctcattccggtg-tgattcggttcgtcta 17851363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 194
Target Start/End: Original strand, 2720560 - 2720702
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaagaa--gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 151  Q
    |||||||||||||||||||| |||||||||||| ||| ||  ||||  ||||||| |||||||| ||| |||||||||||||||||   |||||| ||||    
T  2720560 cttaactgtggagttcttatggaatgagctaccaaaaaaaaagatgtgtcttgttaatataggtagtaccaaacaattcttataagtcttccttcaacca 2720659  T
Q  152 tggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    || |||||||| | ||||||||||  | |||||||||||||||    
T  2720660 tgcagtctcatacctgcacgaccttgggatccctctcattccg 2720702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 69 - 214
Target Start/End: Original strand, 31821704 - 31821849
Alignment:
Q  69 cttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatg 167  Q
    ||||| |||||||||||| ||| || |||||||||||||||||||| | ||| |||| |||||||||||||| |||||| |||||| |||||||| | |     
T  31821704 cttatggaatgagctaccaaaaaaaagatgcatcttgttgatatagttagtaccaaataattcttataagcattccttcaaccatgtagtctcataccta 31821803  T
Q  168 cacgacctcagaatccctctcattccgatgttgattcggtttgtcta 214  Q
    || | |||||  |||||||||||||||||| ||||||||||| ||||    
T  31821804 catggcctcatgatccctctcattccgatg-tgattcggtttctcta 31821849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 11062438 - 11062325
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| |||  ||||| |||||||||||  |||||| |    
T  11062438 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtacaaaacacttcttataagccttccttcaa 11062339  T
Q  149 ccatggagtctcat 162  Q
    ||||| ||| ||||    
T  11062338 ccatgtagtttcat 11062325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 20735844 - 20735759
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    ||||||| ||||||| ||||||||||  ||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||    
T  20735844 cttaactatggagtttttatagaatggactaccgaaaagaagatgcatcttgttgatataagtagtatcaaacaattcttataagc 20735759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 50 - 192
Target Start/End: Complemental strand, 21312124 - 21311981
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||| |||||| |||| |||||||  |||| |||||| ||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  21312124 cacgtttaactatggatttcttatgaaatgggctaccaaaaagaagatgcatcttgttgatataggtagtacctaacaattcttataagccttccttcaa 21312025  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattc 192  Q
    ||||| |||||||| | |||||  |||||  | |||||||||||    
T  21312024 ccatgcagtctcatacctgcacagcctcatgaaccctctcattc 21311981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 21311668 - 21311519
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||| ||||||||||| ||||||||| || ||| ||||||| |||||||| || |||||  || |||||||||||||||||   |||||| |    
T  21311668 cacgcttaactgcggagttcttatggaatgagcttccaaaaagaagatggatcttgtttatctaggtaataccaaacaattcttataaggcttccttcaa 21311569  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | || ||| |||||  | |||||||||||||||||    
T  21311568 ccatgcagtcccatacttgtacggcctcatgaaccctctcattccgatgt 21311519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 23776592 - 23776449
Alignment:
Q  51 acgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 149  Q
    |||||||| |||| |||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| || || |||||||||||   |||||| ||    
T  23776592 acgcttaa-tgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccagacgattcttataagtcttccttcaac 23776494  T
Q  150 catggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    |||| |||| ||| | | || | |||||| || ||||||||||||    
T  23776493 catgtagtcccatacctacaaggcctcaggatacctctcattccg 23776449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 2890832 - 2890959
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||| ||||| | |||||||| ||||||| ||||||||||| ||  | |||||||||||||| |  |||||| |    
T  2890832 cacgcttaactgtggagttcttatggaatgggctactgaaaagaagaagcatctttttgatataggtagtccctaacaattcttataaaccttccttcaa 2890931  T
Q  149 ccatggagtctcatgcatgcacgacctc 176  Q
    ||||| |||| ||| | |||||| ||||    
T  2890932 ccatgcagtcccatacctgcacggcctc 2890959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 194
Target Start/End: Original strand, 14771716 - 14771857
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 152  Q
    |||||||||||||||||||| ||||    ||||  |||||| ||| ||||||||||||||||| ||| |||||||||||||||||   |||||| |||||    
T  14771716 cttaactgtggagttcttatggaatagattaccaaaaagaatatggatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccat 14771815  T
Q  153 ggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    | |||||||| | | |||| | || | |||||||||||||||    
T  14771816 gcagtctcatacctacacggcttcgggatccctctcattccg 14771857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 28583112 - 28583027
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    |||| ||||||| ||||||| |||||| |||||| ||||| |||||||||||||||||||| | |||||||| |||||||||||||    
T  28583112 cttagctgtggatttcttatggaatgaactaccggaaagatgatgcatcttgttgatatagatcgtatcaaataattcttataagc 28583027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 28065831 - 28065980
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctacc----gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||| |||||||||||||| |||| |||||||     ||| ||||||||||||||||||| || | ||| ||||||||||||||||||  || ||| |    
T  28065831 gcttaattgtggagttcttatggaataagctaccaaaaaaaaaaagatgcatcttgttgatagagatagtaccaaacaattcttataagctttcattcaa 28065930  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
     |||  ||||||||   | |||||||| || |||||||||||||||||||    
T  28065931 tcatacagtctcatttctacacgaccttaggatccctctcattccgatgt 28065980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 9440849 - 9440973
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 147  Q
    |||| |||||||||| ||||||||| |  || ||||| |||| ||| |||||||||||||||| | || ||| |||| |||||||||||||| ||||||     
T  9440849 acacacttaactgtgaagttcttatggtttgggctactgaaaagaaaatgcatcttgttgataaaagtagtaccaaagaattcttataagcattccttca 9440948  T
Q  148 accatggagtctcatgcatgcacga 172  Q
    |||||| |||  ||||| |||||||    
T  9440949 accatgtagttccatgcctgcacga 9440973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 15929338 - 15929263
Alignment:
Q  64 gagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    |||||||||| |||||||||||||||| ||| ||||||||| ||||||||||   || ||||||||||||||||||    
T  15929338 gagttcttatggaatgagctaccgaaaagaatatgcatcttattgatataggcattaccaaacaattcttataagc 15929263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 17205479 - 17205405
Alignment:
Q  62 tggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 136  Q
    |||||||||||| ||||| |||||| ||| |||||| ||||||||| || |||| ||| ||||||||||||||||    
T  17205479 tggagttcttatggaatgggctaccaaaacaagatgaatcttgttggtaaaggtagtaccaaacaattcttataa 17205405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 28780263 - 28780209
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 103  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  28780263 cacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 28780209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 9440493 - 9440570
Alignment:
Q  121 caaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||||||||||||||||  || ||| |||||| |||| ||| | |||||||| |||| |||||||||||||||||||    
T  9440493 caaacaattcttataagccttcattcaaccatgaagtcccatacctgcacgacttcaggatccctctcattccgatgt 9440570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 1991701 - 1991617
Alignment:
Q  55 ttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    ||||||||| |||||||||  |||||||||||| ||||||||||||||||||| | ||| ||  || |||||||||||| |||||    
T  1991701 ttaactgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgtttagatatgtaataccaaacaattcttgtaagc 1991617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 32292995 - 32292889
Alignment:
Q  92 aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 191  Q
    |||||| || |||||| ||||||| ||| ||||||||||||||||||  || ||| |||||| |||||||| | ||||||| || || ||  ||||||||    
T  32292995 aagatgtattttgttggtataggtagtaccaaacaattcttataagccttcattcaaccatgcagtctcatacctgcacgatctaaggatttctctcatt 32292896  T
Q  192 ccgatgt 198  Q
    || ||||    
T  32292895 ccaatgt 32292889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 153
Target Start/End: Original strand, 33774994 - 33775101
Alignment:
Q  49 acacgcttaactgtggagttcttatagaatgagcta-ccgaaagaagatgca--tcttgttgatataggtggtatcaaacaattcttataagcactcctt 145  Q
    |||| |||||||||||||||||||| |||||  ||| |  ||||||||||||  |||||||||||||||| | | || ||||||||||||| |  |||||    
T  33774994 acacacttaactgtggagttcttatggaatggactatcaaaaagaagatgcatctcttgttgatataggtagcaccagacaattcttataatccttcctt 33775093  T
Q  146 ctaccatg 153  Q
    | ||||||    
T  33775094 caaccatg 33775101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 20732727 - 20732642
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 138  Q
    |||||| || ||||| |||| ||||| |||||||||| ||| |||||| || || |||||||| ||| |||| |||||||||||||    
T  20732727 cttaaccgtagagtttttattgaatgggctaccgaaaagaatatgcatattattaatataggtagtaccaaataattcttataagc 20732642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 2044 - 2187
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  2044 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 2143  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattc 192  Q
    ||||| |||||||| | |||||| |||||| | |||| ||||||    
T  2144 ccatgcagtctcatacctgcacggcctcaggaaccctttcattc 2187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 19119 - 18970
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  19119 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 19020  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | |||||| |||| | |||||||||||||||||||    
T  19019 ccatgcagtcccatacctgcacggcctctggatccctctcattccgatgt 18970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 18128 - 18276
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 149  Q
    |||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||   |||||| ||    
T  18128 cacgcttaactgtggagttcttatggaattagctaccaaaaaaagatgcatcttgttgatataggtagtatcaaacaattcttataagtcttccttcaac 18227  T
Q  150 catggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
     ||| |||| ||| | | |||| |||||| |||||||||||||||||||    
T  18228 tatgtagtcacatacctacacggcctcaggatccctctcattccgatgt 18276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 17591 - 17740
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||||||||||||||||  | ||||||||| ||| |||||| |||| ||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  17591 cacgcttaactgtggagttcttatgaattgagctaccaaaaagaagatacatcctgttgatataggtagtaccaaacaattcttataagctttccttcaa 17690  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | | |||| |||||| ||||||||||||| |||||    
T  17691 ccatgtagtcccatacctacacggcctcaggatccctctcattctgatgt 17740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 2895 - 2746
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  2895 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 2796  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | | |||| |||||| |||||||||||| ||||||    
T  2795 ccatgtagtcccatacctacacggcctcaggatccctctcatttcgatgt 2746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 105873 - 105724
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  105873 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcattttgttgatataggtagtaccaaacaattcttataagccttccttcaa 105774  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    || || |||  ||| | || ||| |||||| |||||||||||||||||||    
T  105773 ccctgcagttccatacctgtacggcctcaggatccctctcattccgatgt 105724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 78; Significance: 3e-36; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 162671 - 162820
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| |||||||||||||||||   |||||| |    
T  162671 cacgcttaactgcggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagtcttccttcaa 162770  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | || ||| |||||| |||||||||||||||||||    
T  162771 ccatgcagtcacatacctgtacggcctcaggatccctctcattccgatgt 162820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 56 - 162
Target Start/End: Original strand, 69814 - 69921
Alignment:
Q  56 taactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatgg 154  Q
    |||||||||||||||||| ||||||||||  |||| || |||||||| ||||||||||||| ||| ||||||||| ||||||||| |||||| || |||     
T  69814 taactgtggagttcttatggaatgagctaatgaaaaaaagatgcatcatgttgatataggtagtaccaaacaattattataagcattccttcaacgatgc 69913  T
Q  155 agtctcat 162  Q
    ||||||||    
T  69914 agtctcat 69921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 163224 - 163167
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgtt 106  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||    
T  163224 cacgcttaactgtggaattcttaaagaatgagctaccgaaaagaagatgcatcttgtt 163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 163127 - 163181
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 103  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  163127 cacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 163181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 1373 - 1215
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| |    
T  1373 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaattcttataagccttccttcaa 1274  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    ||||| |||| ||| | |||| | |||||| | || |||||||||| || ||||||||||    
T  1273 ccatgcagtcccatacctgcatggcctcaggaaccgtctcattccggtg-tgattcggtt 1215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 2203 - 2352
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    ||||||||||| | |||||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  2203 cacgcttaactattgagttcttatggaataagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 2302  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||||| |||| ||| | |||||| ||| || |||| ||||||||||||||    
T  2303 ccatgtagtcccatacctgcacggccttaggatccttctcattccgatgt 2352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 54 - 208
Target Start/End: Complemental strand, 4710 - 4556
Alignment:
Q  54 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 152  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| ||| |  |||||| |||||    
T  4710 cttaactgtggagttcttataaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttctaaaccttccttcaaccat 4611  T
Q  153 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    | |||| ||| | |||| | |||||| | ||||||| |||||||| ||||||||||    
T  4610 gcagtcccatacctgcatggcctcaggaaccctctccttccgatg-tgattcggtt 4556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 50 - 132
Target Start/End: Complemental strand, 5174 - 5091
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattctt 132  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||    
T  5174 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattctt 5091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 142306 - 142416
Alignment:
Q  88 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 187  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||| || |||||| |||||| |||| ||| | |||||| |||||| ||||||||    
T  142306 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaacattccttcaaccatgaagtcccatacctgcacggcctcaggatccctct 142405  T
Q  188 cattccgatgt 198  Q
    |||||||||||    
T  142406 cattccgatgt 142416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 154910 - 154765
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||| ||| | ||||||||||||||||  |||||| |    
T  154910 cacgcttaactgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataagccttccttcaa 154811  T
Q  149 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 194  Q
    ||||| |||| ||| | | || | |||||| | |||||||||||||    
T  154810 ccatgtagtcccatacctacaaggcctcaggagccctctcattccg 154765  T

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Target: scaffold0005 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 198
Target Start/End: Complemental strand, 245228 - 245090
Alignment:
Q  60 tgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtct 159  Q
    |||||||||||||| |  |  ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||   ||||| |||||| ||||     
T  245228 tgtggagttcttatggtttaggctaccgaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttcaaccatgtagtcc 245129  T
Q  160 catgcatgcacgacctcagaatccctctcattccgatgt 198  Q
    ||| | | || | |||||| |||||||||||||||||||    
T  245128 catacctacatggcctcaggatccctctcattccgatgt 245090  T

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Target: scaffold0005; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 245668 - 245559
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 148  Q
    |||||||||||||||||||||||| |  |  ||||| | |||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||| |    
T  245668 cacgcttaactgtggagttcttatggtttaggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaa 245569  T
Q  149 ccatggagtc 158  Q
    ||||| ||||    
T  245568 ccatgaagtc 245559  T

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Target: scaffold0389 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 13526 - 13592
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggt 115  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13526 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggt 13592  T

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Target: scaffold0664 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 3993 - 4118
Alignment:
Q  68 tcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcat 166  Q
    ||||||| |||| |||||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||||| |||||| || ||| |||| ||| | |    
T  3993 tcttataaaatgggctaccaaaaagaagatgcatcttgttgatacaggtagtaccaaacaattcttataagcattccttcaacaatgcagtcccatacct 4092  T
Q  167 gcacgacctcagaatccctctcattc 192  Q
    ||||| |||| | |||||||||||||    
T  4093 gcacggcctcgggatccctctcattc 4118  T

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Target: scaffold0088 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 23785 - 23668
Alignment:
Q  90 agaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctca 189  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||| |||| ||| | |||||| |||||  | ||||||||    
T  23785 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagaaccctctca 23686  T
Q  190 ttccgatgttgattcggtt 208  Q
    || || || ||||||||||    
T  23685 tttcggtg-tgattcggtt 23668  T

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Target: scaffold0557 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 2255 - 2154
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 151  Q
    ||||||||||||||||||||  ||||| |||||| ||| |||||||||||||||| |||||||  ||| ||||||||||||||||||  |||||| ||||    
T  2255 gcttaactgtggagttcttaaggaatgggctaccaaaaagaagatgcatcttgtttatatagggagtaccaaacaattcttataagccttccttcaacca 2156  T
Q  152 tg 153  Q
    ||    
T  2155 tg 2154  T

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Target: scaffold0391 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 146
Target Start/End: Complemental strand, 14891 - 14797
Alignment:
Q  53 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttc 146  Q
    ||||||||||| |||||||||  |||||  |||||||| || |||||||||| |||||||||||  || ||||||||||||||||||| ||||||    
T  14891 gcttaactgtgaagttcttattcaatgaattaccgaaaagacgatgcatcttattgatataggtattaccaaacaattcttataagcattccttc 14797  T

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Target: scaffold0277 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 14695 - 14749
Alignment:
Q  50 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 103  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  14695 cacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 14749  T

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Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 208
Target Start/End: Complemental strand, 26211 - 26064
Alignment:
Q  62 tggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctc 160  Q
    ||||||||||||| ||||||||||| ||| ||||||||||| |||||||||| || ||| |||| ||||  |||||||  |  | | |||||| ||||||    
T  26211 tggagttcttataaaatgagctaccaaaaagaagatgcatcatgttgatatatgtagtaccaaaaaatttgtataagccattatgcaaccatgaagtctc 26112  T
Q  161 atgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 208  Q
    |  | |||||| ||| || ||||||||| ||| |||||  ||||||||    
T  26111 acacctgcacggccttaggatccctctctttctgatgtaaattcggtt 26064  T

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