View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7837_high_7 (Length: 283)

Name: NF7837_high_7
Description: NF7837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7837_high_7
NF7837_high_7
[»] chr3 (113 HSPs)
chr3 (7-270)||(46013640-46013903)
chr3 (7-270)||(51473073-51473336)
chr3 (42-270)||(51828758-51828986)
chr3 (7-270)||(41998295-41998558)
chr3 (46-270)||(44676690-44676914)
chr3 (42-270)||(32730607-32730835)
chr3 (46-270)||(49951650-49951874)
chr3 (42-270)||(51828175-51828403)
chr3 (42-270)||(40838870-40839098)
chr3 (42-266)||(50662634-50662858)
chr3 (61-270)||(14654310-14654519)
chr3 (42-235)||(47431797-47431990)
chr3 (88-270)||(49720589-49720771)
chr3 (42-270)||(52375427-52375659)
chr3 (88-270)||(329982-330164)
chr3 (42-270)||(40275195-40275422)
chr3 (42-270)||(43678395-43678612)
chr3 (42-265)||(38535409-38535618)
chr3 (94-270)||(39010292-39010467)
chr3 (42-240)||(52237065-52237263)
chr3 (65-271)||(43222513-43222718)
chr3 (42-270)||(55389705-55389925)
chr3 (42-270)||(34104738-34104976)
chr3 (42-270)||(34104855-34105094)
chr3 (42-236)||(30513822-30514012)
chr3 (42-178)||(51472955-51473091)
chr3 (42-186)||(51828640-51828784)
chr3 (167-270)||(16689527-16689630)
chr3 (65-185)||(43222692-43222812)
chr3 (46-170)||(51828061-51828185)
chr3 (42-181)||(40275401-40275540)
chr3 (42-181)||(46013522-46013661)
chr3 (44-186)||(55389899-55390041)
chr3 (42-186)||(14654493-14654637)
chr3 (42-186)||(49720471-49720615)
chr3 (44-182)||(2044373-2044511)
chr3 (42-178)||(40838752-40838888)
chr3 (42-186)||(49951848-49951992)
chr3 (42-181)||(38535602-38535741)
chr3 (42-181)||(52236916-52237055)
chr3 (42-152)||(25534991-25535101)
chr3 (42-186)||(330138-330282)
chr3 (42-186)||(32730489-32730633)
chr3 (42-186)||(44676572-44676716)
chr3 (42-181)||(52375638-52375777)
chr3 (43-184)||(49407897-49408037)
chr3 (42-186)||(43678586-43678730)
chr3 (72-186)||(39555878-39555992)
chr3 (72-186)||(41046830-41046944)
chr3 (42-185)||(49408087-49408226)
chr3 (62-186)||(8873989-8874111)
chr3 (42-178)||(22370697-22370833)
chr3 (42-133)||(2051399-2051490)
chr3 (72-186)||(5137110-5137224)
chr3 (72-186)||(24300857-24300971)
chr3 (72-185)||(37727059-37727172)
chr3 (42-186)||(37075789-37075932)
chr3 (42-166)||(39010175-39010298)
chr3 (42-186)||(41998532-41998674)
chr3 (78-185)||(20840696-20840803)
chr3 (72-186)||(26837657-26837771)
chr3 (72-185)||(25853529-25853642)
chr3 (72-181)||(26274873-26274982)
chr3 (72-184)||(27393880-27393992)
chr3 (42-185)||(27199995-27200137)
chr3 (76-175)||(30104615-30104714)
chr3 (42-185)||(37847123-37847265)
chr3 (72-186)||(17464792-17464906)
chr3 (72-186)||(32535260-32535374)
chr3 (72-186)||(43973571-43973684)
chr3 (44-154)||(55192220-55192329)
chr3 (72-185)||(23644592-23644705)
chr3 (42-145)||(16701132-16701235)
chr3 (75-186)||(29801549-29801660)
chr3 (72-186)||(31778953-31779067)
chr3 (113-186)||(2323554-2323627)
chr3 (61-186)||(27199821-27199946)
chr3 (120-185)||(30097936-30098001)
chr3 (42-186)||(33412308-33412452)
chr3 (42-183)||(50900833-50900973)
chr3 (111-186)||(39555756-39555831)
chr3 (72-185)||(22425116-22425228)
chr3 (42-178)||(36701406-36701541)
chr3 (113-185)||(41046991-41047063)
chr3 (111-186)||(30098051-30098126)
chr3 (111-186)||(32535138-32535213)
chr3 (61-185)||(36701227-36701347)
chr3 (91-185)||(2323674-2323768)
chr3 (120-185)||(31778841-31778906)
chr3 (94-186)||(43973731-43973822)
chr3 (111-185)||(17464670-17464744)
chr3 (120-186)||(50900719-50900785)
chr3 (120-185)||(5137273-5137338)
chr3 (124-185)||(26274759-26274820)
chr3 (111-168)||(37075984-37076041)
chr3 (111-186)||(4275655-4275730)
chr3 (112-159)||(55087655-55087702)
chr3 (111-185)||(8873869-8873943)
chr3 (111-185)||(20840853-20840927)
chr3 (120-186)||(24300744-24300810)
chr3 (120-186)||(29801707-29801773)
chr3 (126-186)||(16689493-16689553)
chr3 (143-186)||(4275565-4275608)
chr3 (200-270)||(22370815-22370886)
chr3 (212-271)||(29801633-29801691)
chr3 (212-271)||(31778922-31778980)
chr3 (212-271)||(39555847-39555905)
chr3 (212-271)||(41046917-41046975)
chr3 (111-185)||(23644756-23644830)
chr3 (111-185)||(25853413-25853487)
chr3 (46-102)||(5137365-5137421)
chr3 (42-102)||(8873791-8873850)
chr3 (215-271)||(43973657-43973712)
[»] chr2 (81 HSPs)
chr2 (42-270)||(6949552-6949780)
chr2 (42-270)||(43215809-43216037)
chr2 (7-270)||(11539703-11539966)
chr2 (42-270)||(4809097-4809325)
chr2 (42-271)||(38008168-38008397)
chr2 (42-270)||(13399638-13399866)
chr2 (7-270)||(20127802-20128065)
chr2 (16-270)||(43160228-43160482)
chr2 (42-270)||(33920830-33921057)
chr2 (42-267)||(15550895-15551120)
chr2 (42-270)||(4355973-4356202)
chr2 (42-252)||(13315596-13315807)
chr2 (42-270)||(63057-63286)
chr2 (42-270)||(44219744-44219971)
chr2 (42-270)||(42192340-42192570)
chr2 (45-270)||(16953040-16953262)
chr2 (94-270)||(32418375-32418551)
chr2 (42-186)||(43160110-43160254)
chr2 (42-186)||(4355855-4355999)
chr2 (46-186)||(20128039-20128179)
chr2 (42-186)||(5560852-5560996)
chr2 (42-186)||(38008051-38008195)
chr2 (42-181)||(16953241-16953380)
chr2 (7-169)||(16175668-16175830)
chr2 (42-186)||(11539940-11540084)
chr2 (42-186)||(33920712-33920856)
chr2 (42-181)||(42192549-42192688)
chr2 (44-186)||(4808981-4809123)
chr2 (42-186)||(13399522-13399664)
chr2 (45-189)||(17061011-17061156)
chr2 (42-186)||(43216011-43216155)
chr2 (42-181)||(63265-63404)
chr2 (42-181)||(32418257-32418396)
chr2 (46-188)||(9329985-9330126)
chr2 (147-269)||(25335812-25335934)
chr2 (160-258)||(22445867-22445965)
chr2 (42-186)||(649627-649770)
chr2 (42-185)||(28143333-28143475)
chr2 (42-186)||(15550774-15550918)
chr2 (72-186)||(1978238-1978352)
chr2 (88-181)||(6949759-6949852)
chr2 (72-185)||(18451133-18451246)
chr2 (43-150)||(22445741-22445848)
chr2 (72-186)||(239482-239596)
chr2 (72-186)||(40027270-40027384)
chr2 (42-155)||(9330127-9330240)
chr2 (72-185)||(11090651-11090764)
chr2 (44-186)||(44219946-44220089)
chr2 (76-184)||(28616748-28616856)
chr2 (78-185)||(26538381-26538487)
chr2 (72-186)||(40815646-40815760)
chr2 (72-173)||(8425675-8425775)
chr2 (72-184)||(43058463-43058575)
chr2 (63-186)||(25335909-25336032)
chr2 (76-185)||(3025599-3025708)
chr2 (72-186)||(7446471-7446589)
chr2 (210-270)||(5560818-5560878)
chr2 (148-217)||(5560162-5560230)
chr2 (72-186)||(14432272-14432386)
chr2 (72-186)||(22374450-22374564)
chr2 (113-185)||(7446638-7446710)
chr2 (113-185)||(40027432-40027504)
chr2 (210-270)||(649744-649803)
chr2 (111-186)||(18451009-18451084)
chr2 (120-186)||(3025754-3025820)
chr2 (111-185)||(22374617-22374691)
chr2 (72-186)||(26538227-26538340)
chr2 (120-184)||(239645-239709)
chr2 (111-185)||(8425532-8425607)
chr2 (111-186)||(43058624-43058699)
chr2 (120-186)||(1978400-1978466)
chr2 (120-186)||(11090811-11090877)
chr2 (111-185)||(40815524-40815598)
chr2 (42-103)||(24140064-24140125)
chr2 (212-271)||(18451100-18451159)
chr2 (89-148)||(24140004-24140063)
chr2 (42-100)||(31797166-31797223)
chr2 (212-269)||(40027359-40027415)
chr2 (212-269)||(40815615-40815671)
chr2 (164-204)||(16175589-16175629)
chr2 (212-264)||(22374544-22374595)
[»] chr4 (91 HSPs)
chr4 (42-271)||(45838764-45838993)
chr4 (42-270)||(14440046-14440274)
chr4 (42-270)||(34789482-34789710)
chr4 (42-270)||(35643667-35643895)
chr4 (42-270)||(24851565-24851793)
chr4 (46-270)||(28465299-28465523)
chr4 (42-270)||(46736873-46737101)
chr4 (42-270)||(54440787-54441015)
chr4 (43-269)||(26974385-26974611)
chr4 (46-270)||(12593128-12593351)
chr4 (48-269)||(6616779-6616999)
chr4 (42-270)||(34807357-34807585)
chr4 (43-270)||(21034337-21034564)
chr4 (45-270)||(36168550-36168774)
chr4 (88-270)||(33777768-33777950)
chr4 (42-186)||(34789684-34789828)
chr4 (42-271)||(229378-229605)
chr4 (42-180)||(28465181-28465319)
chr4 (42-181)||(14439928-14440067)
chr4 (42-270)||(18965240-18965464)
chr4 (42-181)||(54440669-54440808)
chr4 (42-176)||(56077636-56077770)
chr4 (46-186)||(55677259-55677399)
chr4 (42-184)||(229261-229403)
chr4 (42-186)||(12593325-12593469)
chr4 (42-186)||(21034538-21034682)
chr4 (42-186)||(45838647-45838791)
chr4 (42-186)||(46736755-46736899)
chr4 (42-172)||(28166104-28166235)
chr4 (42-163)||(41608475-41608596)
chr4 (42-186)||(17504074-17504217)
chr4 (42-186)||(24851767-24851911)
chr4 (60-185)||(18965439-18965564)
chr4 (42-163)||(34807217-34807338)
chr4 (42-181)||(36168432-36168571)
chr4 (97-215)||(56077522-56077640)
chr4 (42-181)||(35193408-35193546)
chr4 (72-186)||(12503737-12503851)
chr4 (42-151)||(16214832-16214941)
chr4 (72-186)||(15523535-15523649)
chr4 (72-186)||(25937800-25937914)
chr4 (44-186)||(24335864-24336002)
chr4 (88-186)||(6616974-6617072)
chr4 (72-175)||(22434490-22434593)
chr4 (72-186)||(12234459-12234573)
chr4 (72-186)||(18751903-18752017)
chr4 (42-136)||(33689928-33690022)
chr4 (88-186)||(33777924-33778022)
chr4 (72-185)||(4219687-4219800)
chr4 (72-185)||(11153449-11153562)
chr4 (72-185)||(23494573-23494686)
chr4 (72-185)||(46193707-46193820)
chr4 (65-180)||(17504267-17504382)
chr4 (42-145)||(19529036-19529139)
chr4 (46-185)||(24336066-24336204)
chr4 (95-186)||(35643869-35643960)
chr4 (72-185)||(2118598-2118711)
chr4 (75-186)||(51020930-51021041)
chr4 (76-186)||(54995369-54995479)
chr4 (42-127)||(41114259-41114344)
chr4 (42-186)||(40160194-40160337)
chr4 (72-186)||(48526325-48526439)
chr4 (42-105)||(19528970-19529033)
chr4 (75-186)||(38962122-38962231)
chr4 (108-186)||(26974586-26974664)
chr4 (120-186)||(54995257-54995323)
chr4 (111-184)||(12503615-12503688)
chr4 (94-185)||(10795618-10795709)
chr4 (111-186)||(23494734-23494809)
chr4 (111-186)||(45082715-45082790)
chr4 (218-269)||(55677233-55677284)
chr4 (72-186)||(22170243-22170352)
chr4 (120-186)||(48526473-48526539)
chr4 (111-180)||(4219856-4219925)
chr4 (124-185)||(35193598-35193658)
chr4 (122-186)||(25447548-25447612)
chr4 (94-186)||(40160383-40160475)
chr4 (111-186)||(2118473-2118548)
chr4 (111-186)||(15523414-15523489)
chr4 (111-186)||(46193584-46193659)
chr4 (111-185)||(11153325-11153399)
chr4 (120-186)||(25937962-25938028)
chr4 (121-185)||(12234621-12234685)
chr4 (111-186)||(51021087-51021162)
chr4 (111-185)||(18751778-18751852)
chr4 (111-185)||(22434358-22434432)
chr4 (72-164)||(45082560-45082652)
chr4 (212-271)||(12503706-12503764)
chr4 (120-186)||(25447435-25447501)
chr4 (212-269)||(15523504-15523560)
chr4 (212-264)||(18751872-18751923)
[»] chr7 (79 HSPs)
chr7 (7-271)||(48247808-48248072)
chr7 (42-270)||(25637416-25637644)
chr7 (42-270)||(26026536-26026764)
chr7 (42-271)||(14311504-14311733)
chr7 (42-271)||(16081399-16081628)
chr7 (42-270)||(5745739-5745967)
chr7 (46-270)||(7732706-7732929)
chr7 (46-270)||(27245422-27245646)
chr7 (46-270)||(35160906-35161129)
chr7 (42-271)||(786883-787111)
chr7 (53-271)||(26048059-26048276)
chr7 (94-270)||(5334088-5334264)
chr7 (42-186)||(16081601-16081745)
chr7 (43-204)||(11971439-11971600)
chr7 (42-186)||(48247691-48247835)
chr7 (42-233)||(34595024-34595218)
chr7 (42-186)||(26048249-26048393)
chr7 (46-186)||(5745941-5746081)
chr7 (42-170)||(7732588-7732716)
chr7 (43-151)||(9181746-9181854)
chr7 (42-186)||(26026418-26026562)
chr7 (42-186)||(27245304-27245448)
chr7 (42-225)||(2757961-2758144)
chr7 (42-175)||(24929616-24929749)
chr7 (44-166)||(15712467-15712589)
chr7 (42-146)||(39388608-39388713)
chr7 (42-186)||(11973704-11973848)
chr7 (44-186)||(787084-787226)
chr7 (44-186)||(25637300-25637442)
chr7 (46-186)||(28687802-28687941)
chr7 (42-185)||(34594683-34594825)
chr7 (42-181)||(35161108-35161247)
chr7 (42-186)||(33880887-33881030)
chr7 (72-186)||(32004915-32005029)
chr7 (190-270)||(28687748-28687828)
chr7 (72-186)||(2659141-2659255)
chr7 (88-186)||(34534092-34534190)
chr7 (72-186)||(19590655-19590769)
chr7 (42-186)||(35579188-35579331)
chr7 (42-116)||(9181632-9181706)
chr7 (72-186)||(19830550-19830664)
chr7 (72-186)||(29100152-29100266)
chr7 (76-186)||(35289202-35289312)
chr7 (72-186)||(38858773-38858887)
chr7 (88-181)||(5334016-5334109)
chr7 (61-186)||(35579017-35579142)
chr7 (72-185)||(4641570-4641683)
chr7 (64-185)||(39136807-39136928)
chr7 (42-186)||(9394034-9394176)
chr7 (43-116)||(14311417-14311490)
chr7 (72-185)||(37786897-37787010)
chr7 (72-184)||(4478004-4478115)
chr7 (46-186)||(33880725-33880863)
chr7 (167-270)||(34594800-34594903)
chr7 (190-270)||(39387283-39387363)
chr7 (200-270)||(11973660-11973730)
chr7 (111-186)||(4477880-4477955)
chr7 (110-178)||(5184548-5184615)
chr7 (111-178)||(9393914-9393980)
chr7 (111-186)||(32004793-32004868)
chr7 (111-185)||(19830712-19830786)
chr7 (72-186)||(23953031-23953144)
chr7 (109-185)||(2659016-2659092)
chr7 (94-186)||(34533954-34534045)
chr7 (111-186)||(19590816-19590891)
chr7 (120-185)||(23952919-23952984)
chr7 (42-99)||(28687693-28687750)
chr7 (120-185)||(29100038-29100103)
chr7 (111-182)||(38858936-38859007)
chr7 (46-94)||(5184498-5184546)
chr7 (94-186)||(37787058-37787149)
chr7 (120-183)||(4641738-4641801)
chr7 (146-181)||(9181713-9181748)
chr7 (212-270)||(9394004-9394060)
chr7 (212-271)||(19830637-19830695)
chr7 (212-271)||(29100121-29100179)
chr7 (212-271)||(34534061-34534119)
chr7 (44-102)||(32427406-32427463)
chr7 (111-186)||(35289082-35289155)
[»] chr6 (53 HSPs)
chr6 (7-270)||(25472230-25472493)
chr6 (42-270)||(29891298-29891526)
chr6 (42-270)||(5114568-5114796)
chr6 (42-270)||(31573825-31574053)
chr6 (42-253)||(28636432-28636642)
chr6 (44-270)||(30250909-30251135)
chr6 (92-269)||(31073290-31073469)
chr6 (42-193)||(24640480-24640631)
chr6 (42-180)||(31073450-31073588)
chr6 (54-186)||(29891192-29891324)
chr6 (42-170)||(31574043-31574171)
chr6 (42-180)||(30250791-30250929)
chr6 (42-175)||(11523786-11523917)
chr6 (42-155)||(25468951-25469064)
chr6 (76-184)||(1149734-1149842)
chr6 (72-184)||(28472766-28472878)
chr6 (42-186)||(35163488-35163631)
chr6 (72-186)||(10900231-10900345)
chr6 (72-185)||(20741230-20741343)
chr6 (61-186)||(11276709-11276834)
chr6 (72-185)||(15827943-15828056)
chr6 (72-185)||(11276884-11276997)
chr6 (88-186)||(2322520-2322618)
chr6 (88-186)||(12935458-12935556)
chr6 (72-184)||(23074118-23074230)
chr6 (88-186)||(11445133-11445231)
chr6 (72-186)||(18257267-18257381)
chr6 (61-185)||(10900058-10900182)
chr6 (42-109)||(5120848-5120915)
chr6 (111-186)||(18505220-18505295)
chr6 (94-185)||(35163350-35163441)
chr6 (105-178)||(5114778-5114851)
chr6 (72-186)||(31470617-31470731)
chr6 (72-144)||(29859955-29860027)
chr6 (42-186)||(32836299-32836442)
chr6 (111-186)||(20741392-20741467)
chr6 (111-186)||(22219644-22219719)
chr6 (113-186)||(15827821-15827894)
chr6 (123-186)||(11445278-11445341)
chr6 (111-186)||(18257428-18257503)
chr6 (111-186)||(18505098-18505173)
chr6 (111-185)||(4811549-4811623)
chr6 (111-185)||(12935336-12935410)
chr6 (111-166)||(2319850-2319905)
chr6 (212-271)||(2322488-2322547)
chr6 (212-271)||(20741317-20741376)
chr6 (111-186)||(31470494-31470569)
chr6 (111-185)||(1149607-1149681)
chr6 (42-84)||(22534170-22534211)
chr6 (120-186)||(28472929-28472995)
chr6 (120-186)||(32836189-32836255)
chr6 (42-86)||(28636391-28636435)
chr6 (42-86)||(33095815-33095858)
[»] chr8 (67 HSPs)
chr8 (16-270)||(28254500-28254754)
chr8 (16-270)||(9796944-9797198)
chr8 (45-270)||(35694088-35694313)
chr8 (7-270)||(18049656-18049919)
chr8 (42-270)||(34799180-34799411)
chr8 (45-270)||(5730920-5731140)
chr8 (46-270)||(35426917-35427140)
chr8 (46-269)||(42035876-42036098)
chr8 (42-271)||(15256050-15256274)
chr8 (7-241)||(18428008-18428242)
chr8 (88-269)||(41260407-41260588)
chr8 (46-246)||(2208819-2209019)
chr8 (82-270)||(7910757-7910944)
chr8 (42-227)||(16578208-16578393)
chr8 (42-184)||(16578400-16578542)
chr8 (42-186)||(5731114-5731258)
chr8 (42-186)||(28254728-28254872)
chr8 (42-186)||(41260563-41260707)
chr8 (42-188)||(599798-599944)
chr8 (42-181)||(7910923-7911062)
chr8 (43-186)||(35693971-35694114)
chr8 (42-186)||(9796826-9796970)
chr8 (42-178)||(35427122-35427258)
chr8 (42-186)||(34799385-34799529)
chr8 (45-170)||(18049909-18050034)
chr8 (42-186)||(599632-599776)
chr8 (44-186)||(6115412-6115554)
chr8 (182-270)||(6115351-6115438)
chr8 (72-186)||(13224770-13224884)
chr8 (72-186)||(19176591-19176705)
chr8 (72-185)||(33328288-33328401)
chr8 (59-159)||(35163815-35163915)
chr8 (42-181)||(42036078-42036217)
chr8 (72-186)||(12571994-12572108)
chr8 (76-184)||(11656590-11656698)
chr8 (76-186)||(9177937-9178047)
chr8 (63-184)||(28877024-28877145)
chr8 (72-185)||(31133350-31133463)
chr8 (72-186)||(9929958-9930072)
chr8 (42-136)||(26252909-26253003)
chr8 (72-186)||(44831546-44831660)
chr8 (45-186)||(28877192-28877332)
chr8 (72-185)||(4630087-4630207)
chr8 (72-186)||(33743220-33743334)
chr8 (72-186)||(41681263-41681377)
chr8 (45-186)||(18805266-18805406)
chr8 (111-185)||(9177811-9177885)
chr8 (120-186)||(15256011-15256077)
chr8 (111-185)||(41681426-41681500)
chr8 (223-270)||(599750-599797)
chr8 (111-186)||(11656748-11656823)
chr8 (111-186)||(13224930-13225005)
chr8 (94-185)||(33743084-33743174)
chr8 (120-186)||(4629974-4630040)
chr8 (120-186)||(9929097-9929163)
chr8 (132-185)||(12572155-12572208)
chr8 (120-185)||(19176478-19176543)
chr8 (178-270)||(26254644-26254736)
chr8 (111-182)||(44831426-44831497)
chr8 (128-181)||(26254612-26254665)
chr8 (120-185)||(31133512-31133577)
chr8 (212-271)||(13224857-13224915)
chr8 (212-271)||(33328375-33328434)
chr8 (42-76)||(15255953-15255987)
chr8 (214-271)||(9177908-9177964)
chr8 (214-271)||(41681350-41681407)
chr8 (212-264)||(33743189-33743240)
[»] chr1 (98 HSPs)
chr1 (42-270)||(9992255-9992483)
chr1 (43-270)||(10278767-10278995)
chr1 (46-270)||(30786990-30787214)
chr1 (42-270)||(34555599-34555826)
chr1 (44-269)||(17641467-17641691)
chr1 (42-247)||(21938663-21938868)
chr1 (42-270)||(44582275-44582504)
chr1 (7-270)||(37505133-37505396)
chr1 (42-271)||(50304999-50305228)
chr1 (42-270)||(16298900-16299128)
chr1 (42-270)||(44954326-44954554)
chr1 (88-271)||(29439148-29439331)
chr1 (42-240)||(8229740-8229938)
chr1 (42-240)||(29021104-29021309)
chr1 (42-186)||(37505370-37505514)
chr1 (152-270)||(1744545-1744663)
chr1 (42-186)||(30786872-30787016)
chr1 (43-186)||(4080122-4080265)
chr1 (42-177)||(8229952-8230087)
chr1 (141-270)||(4080239-4080369)
chr1 (42-186)||(1744427-1744571)
chr1 (42-186)||(29439031-29439175)
chr1 (43-181)||(34555482-34555620)
chr1 (42-186)||(1837605-1837750)
chr1 (42-240)||(50926332-50926540)
chr1 (42-181)||(443858-443997)
chr1 (42-168)||(37421262-37421388)
chr1 (42-186)||(10278649-10278793)
chr1 (42-186)||(16298782-16298926)
chr1 (42-186)||(17641666-17641810)
chr1 (42-170)||(52335828-52335956)
chr1 (42-181)||(44582157-44582296)
chr1 (42-180)||(44954534-44954672)
chr1 (42-175)||(9992468-9992601)
chr1 (42-186)||(9833454-9833597)
chr1 (42-186)||(23340283-23340427)
chr1 (42-186)||(50304882-50305026)
chr1 (175-270)||(1837724-1837818)
chr1 (42-185)||(50926544-50926687)
chr1 (75-185)||(4636105-4636215)
chr1 (72-186)||(21856344-21856458)
chr1 (72-185)||(5962880-5962993)
chr1 (72-185)||(33144221-33144334)
chr1 (46-186)||(17088255-17088394)
chr1 (42-186)||(44291609-44291756)
chr1 (72-186)||(17433346-17433460)
chr1 (72-186)||(39154149-39154263)
chr1 (72-185)||(5540121-5540233)
chr1 (72-185)||(15173226-15173339)
chr1 (85-175)||(23526852-23526943)
chr1 (72-186)||(29307083-29307196)
chr1 (72-186)||(29869750-29869864)
chr1 (72-185)||(8678844-8678957)
chr1 (72-185)||(26859362-26859475)
chr1 (72-185)||(50970580-50970693)
chr1 (178-270)||(443787-443879)
chr1 (42-186)||(39485165-39485308)
chr1 (72-186)||(15646493-15646610)
chr1 (42-185)||(45048255-45048397)
chr1 (72-186)||(18984249-18984363)
chr1 (42-186)||(17088441-17088585)
chr1 (43-129)||(6224800-6224886)
chr1 (72-182)||(9019103-9019213)
chr1 (61-186)||(29307243-29307368)
chr1 (42-185)||(44291404-44291545)
chr1 (42-144)||(23526758-23526859)
chr1 (58-144)||(29020996-29021082)
chr1 (42-117)||(2868079-2868154)
chr1 (111-186)||(17433506-17433581)
chr1 (60-186)||(48173867-48173993)
chr1 (113-185)||(26859241-26859313)
chr1 (42-117)||(2868011-2868086)
chr1 (177-220)||(34011559-34011602)
chr1 (61-186)||(9019264-9019389)
chr1 (111-185)||(39154312-39154386)
chr1 (94-186)||(45048429-45048521)
chr1 (111-186)||(5962757-5962832)
chr1 (111-186)||(15173385-15173460)
chr1 (111-186)||(17112460-17112535)
chr1 (111-186)||(21856221-21856296)
chr1 (111-185)||(8678720-8678794)
chr1 (120-186)||(29869910-29869976)
chr1 (42-158)||(48174044-48174160)
chr1 (111-186)||(33144096-33144172)
chr1 (111-186)||(18984410-18984485)
chr1 (111-186)||(50970457-50970532)
chr1 (111-184)||(15646371-15646444)
chr1 (218-270)||(23340401-23340453)
chr1 (215-270)||(44291582-44291635)
chr1 (123-186)||(4636262-4636325)
chr1 (111-186)||(5539995-5540070)
chr1 (212-271)||(8678811-8678870)
chr1 (212-271)||(29869837-29869895)
chr1 (212-271)||(33144188-33144247)
chr1 (212-271)||(39154236-39154294)
chr1 (212-264)||(39485288-39485338)
chr1 (212-264)||(18984343-18984394)
chr1 (42-102)||(44802557-44802616)
[»] chr5 (76 HSPs)
chr5 (42-254)||(8418855-8419067)
chr5 (42-270)||(38900860-38901086)
chr5 (46-271)||(21370798-21371025)
chr5 (42-270)||(15029532-15029755)
chr5 (88-270)||(18149869-18150051)
chr5 (42-270)||(5161683-5161906)
chr5 (7-253)||(19291422-19291667)
chr5 (42-269)||(22651445-22651672)
chr5 (43-186)||(28289785-28289928)
chr5 (42-180)||(28289952-28290090)
chr5 (42-211)||(14340480-14340648)
chr5 (46-186)||(21370998-21371138)
chr5 (42-216)||(4967041-4967215)
chr5 (42-186)||(18150025-18150169)
chr5 (42-181)||(15115402-15115541)
chr5 (42-177)||(39083460-39083595)
chr5 (42-186)||(38900744-38900886)
chr5 (73-185)||(22651648-22651760)
chr5 (44-186)||(14340710-14340851)
chr5 (42-186)||(28495143-28495286)
chr5 (42-185)||(32305918-32306060)
chr5 (72-186)||(2865056-2865170)
chr5 (72-186)||(8461060-8461174)
chr5 (72-186)||(24331861-24331975)
chr5 (88-186)||(164492-164590)
chr5 (72-186)||(15709100-15709214)
chr5 (72-185)||(18183271-18183384)
chr5 (44-185)||(27307361-27307501)
chr5 (42-170)||(4966916-4967043)
chr5 (86-185)||(16018731-16018830)
chr5 (42-149)||(32697562-32697669)
chr5 (72-186)||(8647568-8647682)
chr5 (72-186)||(24362137-24362251)
chr5 (72-186)||(25000220-25000334)
chr5 (88-181)||(5161885-5161978)
chr5 (95-186)||(28495006-28495097)
chr5 (72-186)||(5819230-5819344)
chr5 (208-270)||(14340674-14340736)
chr5 (72-186)||(19359266-19359380)
chr5 (72-186)||(29455043-29455157)
chr5 (72-185)||(14215547-14215658)
chr5 (176-270)||(15115329-15115423)
chr5 (88-186)||(24325512-24325610)
chr5 (73-186)||(15372175-15372287)
chr5 (42-185)||(16752863-16753014)
chr5 (111-186)||(24325390-24325465)
chr5 (111-186)||(24362015-24362090)
chr5 (94-185)||(27307222-27307313)
chr5 (94-184)||(10721947-10722036)
chr5 (111-185)||(19359428-19359502)
chr5 (69-163)||(32697462-32697557)
chr5 (111-185)||(2864933-2865007)
chr5 (111-173)||(14463756-14463818)
chr5 (120-186)||(14463830-14463896)
chr5 (111-184)||(25000382-25000455)
chr5 (226-271)||(28289901-28289946)
chr5 (111-186)||(164369-164444)
chr5 (111-186)||(8647729-8647804)
chr5 (111-186)||(16018878-16018953)
chr5 (111-186)||(24331740-24331815)
chr5 (94-186)||(18183133-18183224)
chr5 (212-271)||(8461147-8461206)
chr5 (111-186)||(14215420-14215495)
chr5 (111-185)||(5819108-5819182)
chr5 (120-185)||(15709262-15709327)
chr5 (212-271)||(164460-164519)
chr5 (212-271)||(2865025-2865083)
chr5 (212-271)||(15709187-15709245)
chr5 (212-271)||(24325481-24325539)
chr5 (212-271)||(24362106-24362164)
chr5 (111-185)||(8461223-8461297)
chr5 (113-218)||(20265846-20265960)
chr5 (213-271)||(24331831-24331888)
chr5 (212-269)||(15372144-15372200)
chr5 (215-270)||(20265893-20265946)
chr5 (42-102)||(41834445-41834504)
[»] scaffold0097 (2 HSPs)
scaffold0097 (44-270)||(46485-46711)
scaffold0097 (42-186)||(46367-46511)
[»] scaffold0712 (2 HSPs)
scaffold0712 (42-269)||(6492-6718)
scaffold0712 (53-180)||(6699-6826)
[»] scaffold0709 (2 HSPs)
scaffold0709 (42-269)||(6510-6736)
scaffold0709 (53-180)||(6717-6844)
[»] scaffold0157 (3 HSPs)
scaffold0157 (72-186)||(16626-16740)
scaffold0157 (111-184)||(16789-16862)
scaffold0157 (212-271)||(16713-16771)
[»] scaffold0295 (3 HSPs)
scaffold0295 (72-185)||(4923-5036)
scaffold0295 (212-271)||(5010-5069)
scaffold0295 (120-186)||(5085-5151)
[»] scaffold0007 (5 HSPs)
scaffold0007 (42-186)||(205670-205813)
scaffold0007 (72-186)||(64432-64546)
scaffold0007 (42-185)||(205051-205194)
scaffold0007 (120-186)||(205558-205624)
scaffold0007 (120-185)||(64597-64662)
[»] scaffold0025 (3 HSPs)
scaffold0025 (195-270)||(84418-84493)
scaffold0025 (42-131)||(78417-78506)
scaffold0025 (127-186)||(84385-84444)
[»] scaffold0019 (2 HSPs)
scaffold0019 (72-186)||(133974-134088)
scaffold0019 (212-271)||(133943-134001)
[»] scaffold0951 (3 HSPs)
scaffold0951 (72-186)||(1797-1911)
scaffold0951 (111-186)||(1958-2033)
scaffold0951 (212-271)||(1884-1942)
[»] scaffold0273 (3 HSPs)
scaffold0273 (72-186)||(4508-4622)
scaffold0273 (111-178)||(4382-4449)
scaffold0273 (212-271)||(4476-4535)
[»] scaffold0027 (3 HSPs)
scaffold0027 (72-186)||(42460-42574)
scaffold0027 (61-186)||(42288-42413)
scaffold0027 (211-271)||(42427-42487)
[»] scaffold0417 (2 HSPs)
scaffold0417 (72-185)||(10751-10864)
scaffold0417 (111-186)||(10915-10990)
[»] scaffold0108 (2 HSPs)
scaffold0108 (61-185)||(15231-15355)
scaffold0108 (120-174)||(15408-15462)
[»] scaffold0176 (1 HSPs)
scaffold0176 (72-174)||(18964-19065)
[»] scaffold1223 (2 HSPs)
scaffold1223 (72-186)||(882-996)
scaffold1223 (61-186)||(1042-1167)
[»] scaffold0432 (1 HSPs)
scaffold0432 (88-185)||(10175-10272)


Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 113)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 7 - 270
Target Start/End: Complemental strand, 46013903 - 46013640
Alignment:
Q  7 tcgaagaatatcgtcctgaaactatatgnnnnnnngcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtcca 106  Q
    ||||| || |||||||| ||||||||||       |||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  46013903 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtcca 46013804  T
Q  107 accacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttac 206  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46013803 accacctatgctcaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttac 46013704  T
Q  207 atacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||| |||||||| |||||||    
T  46013703 atacctgaaacatgtcttaaaaattagggtttttcttgatttgtgtgctgaacaaaatagattc 46013640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 7 - 270
Target Start/End: Complemental strand, 51473336 - 51473073
Alignment:
Q  7 tcgaagaatatcgtcctgaaactatatgnnnnnnngcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtcca 106  Q
    ||||| || |||||||| ||||||||||       |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  51473336 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtcca 51473237  T
Q  107 accacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttac 206  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  51473236 accacctatgctcaaccatgaaataaacaaagaataaaacatgtgggtacaatgaatctactttattcaacacactaacctaattttcgagacatgttac 51473137  T
Q  207 atacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  51473136 atacctgaaacatgtcttaaaaattagggtttttcttggtttgtatgctgaacaaagtagattc 51473073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 51828986 - 51828758
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  51828986 gcagttttagtcctatctccctatttccaacttcataaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 51828887  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  51828886 aaaacatgtgggtacaaggaatctactttattcagcacactaacctaatttccgagacatgttacatacctaaaacatgtcttagaaattagggtttttc 51828787  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||||| ||||    
T  51828786 ttggtttgtgtgctgaacaaagtatattc 51828758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 7 - 270
Target Start/End: Original strand, 41998295 - 41998558
Alignment:
Q  7 tcgaagaatatcgtcctgaaactatatgnnnnnnngcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtcca 106  Q
    ||||| || |||||||| ||||||||||       |||||||||||| ||||||||||||| |||||||| ||||| ||| |||||||||||||||||||    
T  41998295 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcatatctccctatttccaactccataaacgaacagaaatgacagttttagtcca 41998394  T
Q  107 accacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttac 206  Q
    |||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  41998395 accacctatgctcaaccatgaaataaacaaataataaaacatgtgggtacaaagaatctactttattcatcacactaacataatttccgagacatgttac 41998494  T
Q  207 atacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41998495 atacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgctgaacaaagtagattc 41998558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 46 - 270
Target Start/End: Complemental strand, 44676914 - 44676690
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||| | ||| ||||||||||||||||||||||    
T  44676914 ttttagtcctatctctctattttcaactccagaaacgcacataaatgacagttttagtctaaccacctatgctcaactatgaaataaacaaagaataaaa 44676815  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttgg 245  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44676814 catgtgggtactaggaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttgg 44676715  T
Q  246 tttgtgtgatgaacaaagtagattc 270  Q
    |||||||| ||||||||||||||||    
T  44676714 tttgtgtgctgaacaaagtagattc 44676690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 32730835 - 32730607
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||| ||||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||  |     
T  32730835 gcagttttaatcctatctccctatttcaaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaaacaa 32730736  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32730735 aaaacatgtgggtacaaggaatctactttattcagcacactaacctaatttccgagacatgttatatacctgaaacatgtcttagaaattagggtttttc 32730636  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||||||||||    
T  32730635 ttggtttgtgtgctgaacaaagtagattc 32730607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 46 - 270
Target Start/End: Original strand, 49951650 - 49951874
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  49951650 ttttagtcctatctccctatttccaactccataaacgcacataaataacagttttagtccaaccacatatgctcaaccatgaaataaacaaagaataaaa 49951749  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttgg 245  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  49951750 catgtgggtacaaggaatctactttatttagcacactaacctaatttccgagacatgttacatacttgaaacatgtcttagaaattagggtttttcttgg 49951849  T
Q  246 tttgtgtgatgaacaaagtagattc 270  Q
    |||||||| ||||||||||| ||||    
T  49951850 tttgtgtgttgaacaaagtaaattc 49951874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 51828403 - 51828175
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||||||||||||| ||||||| | |||||||||||| |||| ||||    
T  51828403 gcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaactacctatgctcaaccatgaaatacacaaggaat 51828304  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  51828303 aaaagatgtgggtacaaggaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgttttagaaattagggtttttc 51828204  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||   ||||||||||||||    
T  51828203 ttggtttgtgtgcgtaacaaagtagattc 51828175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 40839098 - 40838870
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||| || |||| | ||||||||||||||||| ||||    
T  40839098 gcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaactacatatgctcaaccatgaaataaacaaggaat 40838999  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||     
T  40838998 aaaacatgtgggtacaaggaatctactttattcagcacactaacctaatttctgagacatgttacatacctgaaacatgtcttagaaattaaggtttttt 40838899  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||| |||| || ||||||||||||||||    
T  40838898 ttgggttgtttgctgaacaaagtagattc 40838870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 42 - 266
Target Start/End: Complemental strand, 50662858 - 50662634
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  50662858 gcagttttagtcctagctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 50662759  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||| ||||||||||| ||||||||||||||||| || |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  50662758 aaaacgtgtgggtacaaggaatctactttattcagtaccctaatctaatttccgaaacatgttacatacctgaaacatgtcttagaaattagggtttttc 50662659  T
Q  242 ttggtttgtgtgatgaacaaagtag 266  Q
    ||| ||| |||| | ||||||||||    
T  50662658 ttgatttctgtgctaaacaaagtag 50662634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 61 - 270
Target Start/End: Original strand, 14654310 - 14654519
Alignment:
Q  61 cctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaag 160  Q
    ||||||| |||||||  ||||||||| ||||||||||||||||||||||||| ||  | ||||||||||||||||||||||||||||||||||| ||| |    
T  14654310 cctatttccaactccgtaaacgcacagaaatgacagttttagtccaaccaccaatactcaaccatgaaataaacaaagaataaaacatgtgggtgcaagg 14654409  T
Q  161 aatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaaca 260  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14654410 aatctactttattcagcacactaacctaatttccaagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgctgaaca 14654509  T
Q  261 aagtagattc 270  Q
    ||||||||||    
T  14654510 aagtagattc 14654519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 42 - 235
Target Start/End: Original strand, 47431797 - 47431990
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  47431797 gcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 47431896  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattaggg 235  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  47431897 aaaacatgtgggtgcaatgaatctactttattcagcacactaacctaatttccgagacattttacatacctgaaacatgttttagaaattaggg 47431990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 88 - 270
Target Start/End: Complemental strand, 49720771 - 49720589
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacct 187  Q
    ||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  49720771 aaatgacagttttggtccaaccacctatgctcaaccatgaaataaacaaagaataaaacatgtgggtacaaggaatctactttattcagcacactaacct 49720672  T
Q  188 aatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||    
T  49720671 aatttccgagacatgttacgtacctgaaacatgtcttaaaaattagggtttttcttggtttgtgttctgaacaaagtagattc 49720589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 52375427 - 52375659
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||| ||||||||||||||  ||||||| ||||||| | ||||||||||||||||| |||||| |||| | ||||||||||||||||| ||||    
T  52375427 gcagttttagttctatctccctatttctaactccagaaacgcatagaaatgacagttttagtctaaccacatatgctcaaccatgaaataaacaaggaat 52375526  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  52375527 aaagcatgtgggtacaaggaatctactttattcagcacactaacctaatttctgagacatgttacatacctgaaacatgtcttagaaattagggtttttt 52375626  T
Q  242 tt----ggtttgtgtgatgaacaaagtagattc 270  Q
    ||    || ||||||| ||||||||||||||||    
T  52375627 tttttcgggttgtgtgctgaacaaagtagattc 52375659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 88 - 270
Target Start/End: Original strand, 329982 - 330164
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacct 187  Q
    |||||||||||||||||||||||| |||| | ||||||||| ||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  329982 aaatgacagttttagtccaaccacttatgctcaaccatgaagtaaacaaggaataaaacatgtgcgtacaaggaatctactttattcagcacactaacct 330081  T
Q  188 aatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  330082 aatttccgagatatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgttgaacaaagtagattc 330164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 40275195 - 40275422
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||| |||||  ||||||| ||||||||| |||||||||||||||||||||||| |||| | ||||||||||||||||| ||||    
T  40275195 gcagttttagtcctatctccatatttctaactccagaaacgcacagaaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaaggaat 40275294  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||| |||||||||| ||  |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  |||||     
T  40275295 aaagcatgtgggtataagaaatctactttattcagcacactaatctaatttctgagacatgttacatacctgaaacatgtcttagaaattagaatttttt 40275394  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    || | ||||||| ||||||||||||||||    
T  40275395 ttag-ttgtgtgctgaacaaagtagattc 40275422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 43678395 - 43678612
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||||| || |||||| ||||||||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  43678395 gcagttttagtcttatctccctatttccaactccagaagcgcacataaatgacagttttagtccaaccacctatgctcaactatgaaataaacaaagaat 43678494  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||| ||||||||||           |||||||||||||||||||||    
T  43678495 aaaacatgtgggtacaaggaatctactttattcaatacactaacctaatttccgagaaatgttacata-----------tcttagaaattagggtttttc 43678583  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||||||||||    
T  43678584 ttggtttgtgtgctgaacaaagtagattc 43678612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 42 - 265
Target Start/End: Original strand, 38535409 - 38535618
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||              ||||||||||||||||||    
T  38535409 gcagtttcagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagttcaacc--------------atgaaataaacaaagaat 38535494  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  38535495 aaaacatgtgggtacaagaaatctactttattcagcacactaacctaatttccgagacatgttacatacatgaaacatgtcttagaaattaggatttttc 38535594  T
Q  242 ttggtttgtgtgatgaacaaagta 265  Q
    |||| ||||||| |||||||||||    
T  38535595 ttggcttgtgtgctgaacaaagta 38535618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 94 - 270
Target Start/End: Complemental strand, 39010467 - 39010292
Alignment:
Q  94 cagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttc 193  Q
    ||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  39010467 cagttttagtccaaccacctatgctcaaccataaaataaacaaagaataaaacatgtgggtacaaggaatttattttattcagcacactaacctaatttc 39010368  T
Q  194 cgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||    
T  39010367 cgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgct-aacaaattagattc 39010292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 52237263 - 52237065
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||||||||||  ||||||  ||||||||| ||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||    
T  52237263 gcagttttagtcctatctccctatttctaactccggaaacgcacagaaatgacagttttagtcaaaccacatatgttcaaccatgaaataaacaaggaat 52237164  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggttttt 240  Q
    ||| ||||||||| |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||    
T  52237163 aaagcatgtgggtgcaaagaatctactttattcagcgcactaacctaatttctgagatatgttacatacctgaaacatgtcttagaaataaggtttttt 52237065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 65 - 271
Target Start/End: Original strand, 43222513 - 43222718
Alignment:
Q  65 ttttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatc 164  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||  ||||    
T  43222513 ttttcaactccagaaacgtacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaagaaatc 43222612  T
Q  165 tactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagt 264  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||| | ||||| || ||| ||||| |||| |||||    
T  43222613 tactttattcagcatactaacctaatttctaagacatgttacatacttgaaacatgtcttagaaatta-gttttttttttgttagtgtgctgaataaagt 43222711  T
Q  265 agattct 271  Q
    |||||||    
T  43222712 agattct 43222718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 55389705 - 55389925
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||||||||||| |   | ||||| ||||| | ||||    
T  55389705 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccacctatgctacccaatgaagtaaacgaggaat 55389804  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||      |||||||  |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  55389805 aaaacatgtgggta------atctact--attcagcacactaacctaatttccgagatatgttacatacctgaaatatgtcttagaaattagggtttttc 55389896  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| |||| |||||||||||    
T  55389897 ttggtttgtgtgctgaaaaaagtagattc 55389925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 34104738 - 34104976
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||| ||||| || ||||| |||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  34104738 gcagttttagtcatatctcc-tatttccagctccagaaacgcacaaaaatgacatttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 34104836  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaa-----------cctaatttccgagacatgttacatacctgaaacatgtcttagaaat 230  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||           |||||||||  ||||||||||||  | |||||||||||| ||||||    
T  34104837 aaaacatgtgggtacaaggaatctactttgttcggcacactaaccaagaaaaaccctaatttcaaagacatgttacaagcatgaaacatgtctaagaaat 34104936  T
Q  231 tagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||||| |||||  |||||||||||||||    
T  34104937 tagggtttttcttggttagtgtgccgaacaaagtagattc 34104976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 34105094 - 34104855
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||| |||||| ||||| ||||| || ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  34105094 gcagttttagtcccatctccttatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 34104995  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaa-----------cctaatttccgagacatgttacatacctgaaacatgtcttagaaat 230  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||           |||||||||  ||||||||| ||| | || |||||||||| |||||    
T  34104994 aaaacatgtgggtacaaggaatctactttgttcggcacactaaccaagaaaaaccctaatttcttagacatgtttcatgcttgtaacatgtctttgaaat 34104895  T
Q  231 tagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||||| |||||  |||||||||||||||    
T  34104894 tagggtttttcttggttagtgtgccgaacaaagtagattc 34104855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 42 - 236
Target Start/End: Original strand, 30513822 - 30514012
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||| |||||  |||| || ||||||||| ||||||||||||||||||| ||||||||| | ||||| |||||||||||| |||    
T  30513822 gcagttttagtcatatctccatatttcgaacttcagaaacgcacagaaatgacagttttagtccagccacctatgctcaacca-gaaataaacaaataat 30513920  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggt 236  Q
    |||||||||| ||||   |||||||||||||||||||||||| |||||||||| |||||||||| ||| || |||||||||||||||||||||||    
T  30513921 aaaacatgtgcgtac---gaatctactttattcagcacactaccctaatttccaagacatgttatatatctaaaacatgtcttagaaattagggt 30514012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 42 - 178
Target Start/End: Original strand, 51472955 - 51473091
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  51472955 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgttcaaccatgaaataaacaaggaat 51473054  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagca 178  Q
    |||  |||||||||||| ||||||||||| |||||||    
T  51473055 aaataatgtgggtacaaggaatctactttgttcagca 51473091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 51828640 - 51828784
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||| ||||    
T  51828640 gcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccatctatgctcaaccatgaaataaacaaggaat 51828739  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| |||| |||||| |||||||||| ||||    
T  51828740 aaatcatgtgggtacaaggaatatactttgttcagcacacaaacc 51828784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 16689630 - 16689527
Alignment:
Q  167 ctttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtag 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16689630 ctttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgctgaacaaagtag 16689531  T
Q  267 attc 270  Q
    ||||    
T  16689530 attc 16689527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 65 - 185
Target Start/End: Complemental strand, 43222812 - 43222692
Alignment:
Q  65 ttttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatc 164  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||  ||||||||||||||||||    
T  43222812 ttttcaactccagaaacgcacaaaaatgacagttttagtccaaccacccatgttcaaccatgaaataaacaaggaataaagtatgtgggtacaaagaatc 43222713  T
Q  165 tactttattcagcacactaac 185  Q
    |||||||||||||||||||||    
T  43222712 tactttattcagcacactaac 43222692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 51828061 - 51828185
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||     
T  51828061 ttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaataaat 51828160  T
Q  146 catgtgggtacaaagaatctacttt 170  Q
    ||||||||||||| |||||||||||    
T  51828161 catgtgggtacaaggaatctacttt 51828185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 40275540 - 40275401
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  40275540 gcagttttagtcatatccccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 40275441  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||| ||||||| ||||| ||||||||||| ||||||||||    
T  40275440 aaagcatgtggatacaaggaatctactttgttcagcacac 40275401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 46013522 - 46013661
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| | |||||||||||||| |||||||    
T  46013522 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacggttttagtccaaccacctatgctcaaccatgaaataaataaagaat 46013621  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||| ||||||||||||| ||||||| ||| ||||||||||    
T  46013622 aaatcatgtgggtacaatgaatctattttgttcagcacac 46013661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 55390041 - 55389899
Alignment:
Q  44 agttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataa 143  Q
    ||||||||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | |||||| |||||||||| ||||||    
T  55390041 agttttagtcctacctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccataaaataaacaaggaataa 55389942  T
Q  144 aacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    | ||||||||||||| ||||||||||| |||||||||| ||||    
T  55389941 atcatgtgggtacaaggaatctacttttttcagcacacaaacc 55389899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 14654637 - 14654493
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||| |||||||||||||||| |||||| ||||| | ||||||||||||||||| ||||    
T  14654637 gcagttttagtcctatctccttatttccaactccagaaacgcacataaatgacagttttagttcaaccatctatgctcaaccatgaaataaacaaggaat 14654538  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||| |||||||||| ||||    
T  14654537 aaatcatgtgggtacaaggaatctactttgttcagcacacaaacc 14654493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 49720471 - 49720615
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||| |||||  ||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  49720471 gcagttttagtcctatctccttatttctaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 49720570  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||| ||||| |||| ||||    
T  49720571 aaatcatgtgggtacaaggaatctactttgttcagaacacaaacc 49720615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 2044373 - 2044511
Alignment:
Q  44 agttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataa 143  Q
    |||||||||| ||||||||||||| |||||| | ||||||||| |||| |||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  2044373 agttttagtcatatctccctatttccaactcaagaaacgcacataaataacagttttagtccaaccacctatgttcaactatgaaataaacaaggaataa 2044472  T
Q  144 aacatgtgggtacaaagaatctactttattcagcacact 182  Q
    | ||||||||||||| ||||||||||| |||||||||||    
T  2044473 atcatgtgggtacaaggaatctactttgttcagcacact 2044511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 42 - 178
Target Start/End: Original strand, 40838752 - 40838888
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||| |||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||  | || |||||||||||||||||||    
T  40838752 gcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctataatcaaacatgaaataaacaaagaat 40838851  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagca 178  Q
    ||| ||||||||||||| ||||||||||| |||||||    
T  40838852 aaagcatgtgggtacaaggaatctactttgttcagca 40838888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 49951992 - 49951848
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  49951992 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 49951893  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    | | | ||||||||||| |||| |||||| |||| ||||| ||||    
T  49951892 atatcttgtgggtacaatgaatttactttgttcaacacacaaacc 49951848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 38535741 - 38535602
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  38535741 gcagttttagtcctatctccctatttccaactccagaaacgcacataaattacagttttagtccaaccacatatgttcaaccatgaaataaacaaggaat 38535642  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    |||  ||||||||||||  ||| |||||| ||||||||||    
T  38535641 aaataatgtgggtacaagaaatttactttgttcagcacac 38535602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 52236916 - 52237055
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||| ||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||||| ||||    
T  52236916 gcagttttagtcatatccccctattttcaactccagaaacgcacagaaatgacagttttagtccaatcacctatgctcaaccatgaaataaacaaggaat 52237015  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||| |||||||||||||  |||||| ||| ||||||||||    
T  52237016 aaagcatgtgggtacaagaaatctattttgttcagcacac 52237055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 25534991 - 25535101
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  25534991 gcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 25535090  T
Q  142 aaaacatgtgg 152  Q
    ||| |||||||    
T  25535091 aaatcatgtgg 25535101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 330282 - 330138
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||| | ||||||||| |||||||||||||| |||||||||||||| | |||||| |||||||||| ||||    
T  330282 gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttaatccaaccacctatgctcaaccataaaataaacaatgaat 330183  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||| |||| ||||| ||||    
T  330182 aaatcatgtgggtacaaggaatctactttgttcaacacacaaacc 330138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 32730489 - 32730633
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||| || ||||||||||||| |||||| | ||||||||| |||||||||||||||| ||| |||||||| | ||||||||||||||||| ||||    
T  32730489 gcagttttaatcgtatctccctatttccaactctagaaacgcacataaatgacagttttagttcaatcacctatgctcaaccatgaaataaacaaggaat 32730588  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||| |||||||||| ||||    
T  32730589 aaatcatgtgggtacaaggaatctactttgttcagcacacaaacc 32730633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 44676572 - 44676716
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||| ||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||||||| ||  ||||| | ||||||||||||||||| ||||    
T  44676572 gcagctttagtcctatctccctatttccaactcaagaaacgcacagaaatgacagttttagtccagccttctatgctcaaccatgaaataaacaaggaat 44676671  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||| |||||||||| ||||    
T  44676672 aaatcatgtgggtacaatgaatctactttgttcagcacacaaacc 44676716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 52375777 - 52375638
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||  |||||||| |||||||| ||||||||| |||||||||||||||||||||||| |||| | |||||||||||||| || ||||    
T  52375777 gcagttttagtcatattcccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacttatgctcaaccatgaaataaataaggaat 52375678  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||| ||||||||||||| ||||||||||| ||||||||||    
T  52375677 aaagcatgtgggtacaaggaatctactttgttcagcacac 52375638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 184
Target Start/End: Original strand, 49407897 - 49408037
Alignment:
Q  43 cagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaata 142  Q
    ||||||||||| || |||| |||||||||||||||||||||| | |||||||| |||||| || ||| |||||| | ||||||||||||||||| |||||    
T  49407897 cagttttagtcatacctcc-tattttcaactccaaaaacgcagagaaatgacaattttagacctaccccctatgctaaaccatgaaataaacaaggaata 49407995  T
Q  143 aaacatgtgggtacaaagaatctactttattcagcacactaa 184  Q
    |||||||||||||||| ||||| |||||||||| ||||||||    
T  49407996 aaacatgtgggtacaaggaatccactttattcaacacactaa 49408037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 43678730 - 43678586
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||| |||| ||||| ||||||| |||||| | ||||||||| |||||||||||||||| |||||||||||  | ||||||| ||||||||| ||||    
T  43678730 gcagtttcagtcatatcttcctatttccaactctagaaacgcacataaatgacagttttagttcaaccacctatactcaaccatggaataaacaaggaat 43678631  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| |||||||||| || ||||||||||| |||||||||| ||||    
T  43678630 aaatcatgtgggtataaggaatctactttgttcagcacacaaacc 43678586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 39555992 - 39555878
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||||||||||| ||||||||||| ||||||    
T  39555992 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaaacatgtggctacaaagaatccacttta 39555893  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  39555892 ttcaacacactaacc 39555878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 41046830 - 41046944
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  41046830 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatctacttta 41046929  T
Q  172 ttcagcacactaacc 186  Q
    |||| |||| |||||    
T  41046930 ttcaacacattaacc 41046944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 49408226 - 49408087
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||| |||   ||||||||||||| ||||||| | ||||| ||||||||| || || ||||||| | |||||||||||||||||  |||    
T  49408226 gcagttttagtcctacctc---attttcaactccagaaacgcaaagaaatggcagttttagacctac-acctatgctcaaccatgaaataaacaagcaat 49408131  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||    
T  49408130 aaagcatgtgggtacaaagaatctactctattcagcacactaac 49408087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 8874111 - 8873989
Alignment:
Q  62 ctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaaga 161  Q
    ||||||||||||||| ||||||| | ||||||||||||||| |  ||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  8874111 ctattttcaactccagaaacgca-agaaatgacagttttagacttacc-cctatgttcaaccatgaaataaacaaggaataaaacatatgggtacaaaga 8874014  T
Q  162 atctactttattcagcacactaacc 186  Q
    ||| |||||||||| ||||||||||    
T  8874013 atccactttattcaacacactaacc 8873989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 178
Target Start/End: Original strand, 22370697 - 22370833
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||| ||| | |||||||| ||||||||| |||| ||||||||||| ||| | | |||||| |||||| |||||||||| ||||    
T  22370697 gcagttttagtcctatctccttatctccaactccagaaacgcacagaaataacagttttagttcaatcgcttatgttcaaccataaaataaacaaggaat 22370796  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagca 178  Q
    ||| ||||| ||||||| ||||||||||| |||||||    
T  22370797 aaatcatgttggtacaaggaatctactttgttcagca 22370833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 2051399 - 2051490
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaa 133  Q
    ||||||||| |||||| |||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2051399 gcagttttattcctatttccctatttctaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgcttaaccatgaaataaa 2051490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 5137110 - 5137224
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  5137110 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 5137209  T
Q  172 ttcagcacactaacc 186  Q
    |||| |||| |||||    
T  5137210 ttcaacacattaacc 5137224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 24300971 - 24300857
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  24300971 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 24300872  T
Q  172 ttcagcacactaacc 186  Q
    |||  ||||||||||    
T  24300871 ttcgacacactaacc 24300857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 37727059 - 37727172
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| | ||||    
T  37727059 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaatgaataaagcatgtgggtacaaagaatccatttta 37727158  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  37727159 ttcaacacactaac 37727172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 37075789 - 37075932
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||| |||  |||||||||||||| ||||||| | ||||||| ||||||| || ||| |||||| | | |||||||||||| || ||||    
T  37075789 gcagttttagtcctacctct-tattttcaactccagaaacgcagagaaatgaccgttttagacctaccccctatgctcagccatgaaataaagaaggaat 37075887  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||| |||||||||| ||||||||||    
T  37075888 aaagcatgtgggtacaatgaatccactttattcaacacactaacc 37075932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 39010175 - 39010298
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||  ||||||||||||||||||||| ||| ||||| |||||| ||||||||||||||||| |||| | ||||||||||||||||| |||     
T  39010175 gcagttttagtcacatctccctattttcaactccataaa-gcacataaatgatagttttagtccaaccacatatgctcaaccatgaaataaacaaggaac 39010273  T
Q  142 aaaacatgtgggtacaaagaatcta 166  Q
    |||  |||||||||||| |||||||    
T  39010274 aaataatgtgggtacaaggaatcta 39010298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 41998674 - 41998532
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||| ||||||||||||||||| | ||||| ||| || ||| || |||||| |||||||||||| | |||||||||||||||||  |||    
T  41998674 gcagttttagtccta-ctccctattttcaactctagaaacgtacataa-tgatagatttagttcaaccacctatgctcaaccatgaaataaacaagtaat 41998577  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||  |||||||||||| ||||||||||| |||||||||| ||||    
T  41998576 aaattatgtgggtacaaggaatctactttgttcagcacacaaacc 41998532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 20840696 - 20840803
Alignment:
Q  78 aaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagc 177  Q
    ||||||| | ||||||||||||||| || ||| |||||||| ||||||||||||||||| ||||||| || |||||||||||||||| |||||||||| |    
T  20840696 aaacgcagagaaatgacagttttagacctaccccctatgttcaaccatgaaataaacaacgaataaagcacgtgggtacaaagaatccactttattcaac 20840795  T
Q  178 acactaac 185  Q
    ||||||||    
T  20840796 acactaac 20840803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 26837771 - 26837657
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||| ||| | ||||||||||||||| |  ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  26837771 ctccaaaaatgcagagaaatgacagttttagacttaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 26837672  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  26837671 ttcaacacactaacc 26837657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 25853642 - 25853529
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| |||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  25853642 ctccaaaaacgcagagaaataacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 25853543  T
Q  172 ttcagcacactaac 185  Q
    |||| || ||||||    
T  25853542 ttcaacagactaac 25853529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 72 - 181
Target Start/End: Complemental strand, 26274982 - 26274873
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    |||||||| |||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  26274982 ctccaaaaccgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 26274883  T
Q  172 ttcagcacac 181  Q
    |||| |||||    
T  26274882 ttcaacacac 26274873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 184
Target Start/End: Complemental strand, 27393992 - 27393880
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| |||||||||| || ||| | |||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  27393992 ctccaaaaacgcagagaaataacagttttagacctaccccatatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 27393893  T
Q  172 ttcagcacactaa 184  Q
    |||| ||||||||    
T  27393892 ttcaacacactaa 27393880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 27200137 - 27199995
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| || |||| |||||||||||||| ||||||| | ||||||||| ||||| || ||| | |||| | ||||||||||||||||| ||||    
T  27200137 gcagttttagtcatacctcc-tattttcaactccagaaacgcagagaaatgacaggtttagacctaccccttatgctcaaccatgaaataaacaaggaat 27200039  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||| |||||||| |||| ||||  ||| ||||||||||||||||    
T  27200038 aaatcatgtgggcacaaggaattcactctattcagcacactaac 27199995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 175
Target Start/End: Original strand, 30104615 - 30104714
Alignment:
Q  76 aaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattca 175  Q
    ||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  30104615 aaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattca 30104714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 37847265 - 37847123
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||| ||||||||||| || ||| ||| | |||||||| |||||| |  |||  ||||| | ||||||||||||||||| ||||    
T  37847265 gcagttttagtcctatctcc-tattttcaacttcagaaatgcagagaaatgacaattttagacttacccactatgctcaaccatgaaataaacaaggaat 37847167  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||| ||||||| || |||||||| |||||||||| |||||||||    
T  37847166 aaagcatgtggatataaagaatccactttattcaacacactaac 37847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 17464906 - 17464792
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||| ||| | ||||||||||||||| || | | |||||| | ||||||||||||||||| ||||||| || |||||||||||||||| ||||||    
T  17464906 ctccaaaaatgcagagaaatgacagttttagacctaacccctatgctcaaccatgaaataaacaaggaataaatcaagtgggtacaaagaatccacttta 17464807  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  17464806 ttcaacacactaacc 17464792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 32535374 - 32535260
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||||| |||||||| || | | |||||||| |||||| |||||||||| ||||||| ||||||||||||||||||  ||||||    
T  32535374 ctccaaaaacgcagagaaatgatagttttagacctaacccctatgttcaaccataaaataaacaaggaataaagcatgtgggtacaaagaattcacttta 32535275  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  32535274 ttcaacacactaacc 32535260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 43973571 - 43973684
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| |||||||||| || ||| ||||||||  ||||||||||||| || ||||||| ||||||||||||||||||| ||||||    
T  43973571 ctccaaaaacgcagataaataacagttttagacctacc-cctatgttctaccatgaaataaataaggaataaagcatgtgggtacaaagaatccacttta 43973669  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  43973670 ttcaacacactaacc 43973684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 44 - 154
Target Start/End: Original strand, 55192220 - 55192329
Alignment:
Q  44 agttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataa 143  Q
    ||||||||||||| |||| |||||||||||||| ||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||    
T  55192220 agttttagtcctacctcc-tattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataa 55192318  T
Q  144 aacatgtgggt 154  Q
    | |||||||||    
T  55192319 agcatgtgggt 55192329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 23644592 - 23644705
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| | |||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||    
T  23644592 ctccaaaaacgcagagaaataatagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtaggtacaaagaatccacttta 23644691  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  23644692 ttcaacacactaac 23644705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 16701235 - 16701132
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||||| |||||||   |||| ||||||||||||||||| | ||||   ||||||||||||||||||||||    
T  16701235 gcagttttagtcatatctccctatttccaactccataaacgcatcgaaattacagttttagtccaaccccttatgcccaaccatgaaataaacaaagaat 16701136  T
Q  142 aaaa 145  Q
    ||||    
T  16701135 aaaa 16701132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 186
Target Start/End: Original strand, 29801549 - 29801660
Alignment:
Q  75 caaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattc 174  Q
    |||||| ||| | ||||||||||||||| |  ||| | |||| | ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  29801549 caaaaatgcagagaaatgacagttttagacatacctcatatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattc 29801648  T
Q  175 agcacactaacc 186  Q
    | ||||||||||    
T  29801649 aacacactaacc 29801660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 31779067 - 31778953
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||| ||||||||| |  ||| |||||| | |||||||||||||| || ||||||| ||||| ||||||||||||| ||||||    
T  31779067 ctccaaaaacgcagagaaatgtcagttttagacgtaccccctatgctcaaccatgaaataaataaggaataaagcatgttggtacaaagaatccacttta 31778968  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  31778967 ttcaacacactaacc 31778953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 2323554 - 2323627
Alignment:
Q  113 tatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  2323554 tatgttcaaccatgaaataaacaaggaatagaacatgtgggtacaaggaatctactctattcagcacactaacc 2323627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 27199821 - 27199946
Alignment:
Q  61 cctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaag 160  Q
    |||||||||||||| | ||||||| | ||||  ||||||||| || ||| |||||| | ||||||||||||||||| ||||||| |||||||| | || |    
T  27199821 cctattttcaactctagaaacgcagataaatatcagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtggggaaaagg 27199920  T
Q  161 aatctactttattcagcacactaacc 186  Q
    |||| ||| |||||| ||||||||||    
T  27199921 aatcaactgtattcaacacactaacc 27199946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 30097936 - 30098001
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  30097936 aaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacactaac 30098001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 33412452 - 33412308
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacc-tatgtttaaccatgaaataaacaaagaa 140  Q
    ||||||||||||||| |||| ||||||||  |  | ||||||| | |||||| |||||||| || ||| || |||| | ||||||||||||||||| |||    
T  33412452 gcagttttagtcctacctcc-tattttcatttttagaaacgcagagaaatgatagttttagacctacccccctatgctcaaccatgaaataaacaaggaa 33412354  T
Q  141 taaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||| ||||||||||||||||| | ||||||| || ||||||||||    
T  33412353 taaagcatgtgggtacaaagaacccactttatccaacacactaacc 33412308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 183
Target Start/End: Complemental strand, 50900973 - 50900833
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||| |||||| |||| |||||||||||||| ||||||| | ||||  |||||||||  | ||| |||||| | |||||||||||||||||  ||     
T  50900973 gcagtttttgtcctacctcc-tattttcaactccataaacgcaaagaaattgcagttttagatctaccccctatgctcaaccatgaaataaacaagaaag 50900875  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacacta 183  Q
    ||| ||||||||||||| ||||| |||||||| | |||||||    
T  50900874 aaagcatgtgggtacaaggaatccactttattgaacacacta 50900833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 39555756 - 39555831
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||||||||||| | |||||||||||||||||    
T  39555756 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaagaatctattatattcagcacactaacc 39555831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 22425228 - 22425116
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| | | ||||||  | ||| |||||| | ||||||||||||||||| ||||||||||||||||||||||||| | ||| ||    
T  22425228 ctccaaaaacgcagagaaattagatttttagatctaccccctatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaaagaa-ccactata 22425130  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  22425129 ttcaacacactaac 22425116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 178
Target Start/End: Complemental strand, 36701541 - 36701406
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| || |||| |||||||||||||| |||| || | ||||| ||||||||| || ||| | |||| | | | ||||||||||||| ||||    
T  36701541 gcagttttagtcatacctcc-tattttcaactccagaaacacatagaaatggcagttttagacctaccccatatgctcagctatgaaataaacaaggaat 36701443  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagca 178  Q
    ||| |||||| |||||| ||||| | |||||||||||    
T  36701442 aaagcatgtgagtacaaggaatcaattttattcagca 36701406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 41047063 - 41046991
Alignment:
Q  113 tatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| ||||||||||| ||||| |||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  41047063 tatgttcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctattcagcacactaac 41046991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 30098126 - 30098051
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||||  ||||||||||| ||||| |||||||||||||||| |||| ||||||| | |||||||||||||||||    
T  30098126 cctatgtacaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctattcagcacactaacc 30098051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 32535138 - 32535213
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||||||| | |||||||||||||||||    
T  32535138 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctattcagcacactaacc 32535213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 36701227 - 36701347
Alignment:
Q  61 cctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaag 160  Q
    |||||||||||||||| ||||||| | |||||||| |||||| || ||  | |||| | |||||||||||||     ||||||| ||||||||||||| |    
T  36701227 cctattttcaactccagaaacgcagataaatgacaattttagacctacgccgtatgctcaaccatgaaataag----gaataaagcatgtgggtacaagg 36701322  T
Q  161 aatctactttattcagcacactaac 185  Q
    |||| ||||||||||||||| ||||    
T  36701323 aatcgactttattcagcacaataac 36701347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 2323768 - 2323674
Alignment:
Q  91 tgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||||||  | ||| |||||| | |||||||||||||| ||  ||||||||||||| |||||| ||||| ||| ||||||||||||||||    
T  2323768 tgacagttttagatctaccccctatgctcaaccatgaaataaataagaaataaaacatgtgagtacaaggaatccactatattcagcacactaac 2323674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 31778841 - 31778906
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  31778841 aaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctattcagcacactaac 31778906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 43973822 - 43973731
Alignment:
Q  94 cagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||| || ||| |||||| | ||||||||| | ||||| |||||||||||||||| |||| ||||||| | |||||||||||||||||    
T  43973822 cagttttagacctacc-cctatgctcaaccatgaagtcaacaaggaataaaacatgtgggcacaaggaatctattctattcagcacactaacc 43973731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 17464670 - 17464744
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||||||| | |||||| |||||||||    
T  17464670 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctattcaccacactaac 17464744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 50900719 - 50900785
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||| |||| |||||||| ||| ||||    
T  50900719 aaccatgaaataaacaaggaataaagcatgtgggtacaaggaatatactctattcagcgcacaaacc 50900785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 5137338 - 5137273
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||||| ||||| |||||||| ||||||| |||| ||||||| | ||||||||||||||||    
T  5137338 aaccatgaaatcaacaaggaataaaatatgtgggcacaatgaatctattctattcagcacactaac 5137273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 26274759 - 26274820
Alignment:
Q  124 atgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||| |||||||||||| ||||||||| |||| ||||||| | ||||||||||||||||    
T  26274759 atgaaatcaacaaagaataagacatgtgggcacaatgaatctattctattcagcacactaac 26274820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 37076041 - 37075984
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctact 168  Q
    |||||| | ||||||||||||||||| ||||||| ||||||| |||||||||||||||    
T  37076041 cctatgctcaaccatgaaataaacaaggaataaagcatgtggatacaaagaatctact 37075984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 4275730 - 4275655
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||  |||||||||||||||| |||| ||||||| | |||| ||||||||||||    
T  4275730 cctatgctcaaccatgaaatcaacatggaataaaacatgtgggcacaaggaatctattctatttagcacactaacc 4275655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 55087655 - 55087702
Alignment:
Q  112 ctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaa 159  Q
    ||||||| ||||||||||||||||| |||||||||| |||||||||||    
T  55087655 ctatgttcaaccatgaaataaacaaggaataaaacacgtgggtacaaa 55087702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 8873869 - 8873943
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||||||||| ||||||| || ||| ||| ||  |||||||| ||||||||||||||||    
T  8873869 cctatgctcaaccatgaaataaacaaggaataaagcacgtgagtataagaaatctactctattcagcacactaac 8873943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 20840927 - 20840853
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| ||||  |||||| | ||||||||| ||||||    
T  20840927 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaataaatctattatattcagcatactaac 20840853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 24300744 - 24300810
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||| ||||| |||||||||||||||| || | ||||||| |||||||| || |||||||    
T  24300744 aaccatgaaatcaacaaggaataaaacatgtgggcacgaggaatctattttattcaacatactaacc 24300810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 29801773 - 29801707
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||| ||||||||||| | |||||||||| || ||||||| | ||||||||| |||||||    
T  29801773 aaccatgaaatcaacaaagaatacagcatgtgggtagaaggaatctattctattcagcatactaacc 29801707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 16689493 - 16689553
Alignment:
Q  126 gaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||| ||||  | ||||||||||||| ||||||||||| |||||||||| ||||    
T  16689493 gaaataaacaaggaatctatcatgtgggtacaaggaatctactttgttcagcacacaaacc 16689553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 4275565 - 4275608
Alignment:
Q  143 aaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||    
T  4275565 aaacatgtgggtacaaagaatccactgtattcaacacactaacc 4275608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 22370886 - 22370815
Alignment:
Q  200 atgttacatacctgaaacatgtcttagaaattagggtttt-tcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||| ||||||||||||||||||| ||| || |||||| | || |||||| || ||||||||||||||||    
T  22370886 atgttatatacctgaaacatgtcttaaaaaataaggttttatttttgtttgtatgctgaacaaagtagattc 22370815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 29801691 - 29801633
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  29801691 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 29801633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 31778922 - 31778980
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  31778922 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 31778980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 39555847 - 39555905
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  39555847 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 39555905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 41046975 - 41046917
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| ||||||||||||||| |||||||||||  |||| |||| ||||||||||||    
T  41046975 tgaaacatatcttagaaattaggg-ttttcttggttaatgtgttgaataaagtagattct 41046917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 23644830 - 23644756
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| ||||  |||| | | |||| |||||||||||    
T  23644830 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaagaaatccattctattaagcacactaac 23644756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 25853413 - 25853487
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| || | ||||||| | |||| ||||| |||||    
T  25853413 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacgaggaatctattatatttagcacgctaac 25853487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 5137421 - 5137365
Alignment:
Q  46 ttttagtcctatctccctattttcaa-ctccaaaaacgcacaaaaatgacagttttag 102  Q
    |||||||||||||||| ||||||||| ||||| ||||||| | |||||||||||||||    
T  5137421 ttttagtcctatctcc-tattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 8873791 - 8873850
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttag 102  Q
    |||||||||||| || |||| ||||||||||| || ||||||| | |||||||||||||||    
T  8873791 gcagttttagtcttacctcc-tattttcaacttcagaaacgcagagaaatgacagttttag 8873850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 43973712 - 43973657
Alignment:
Q  215 aacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    ||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  43973712 aacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 43973657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 81)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 6949552 - 6949780
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  6949552 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatattcaaccatgaaataaacaaagaat 6949651  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  6949652 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttctgagacatgttacatacctgaaacatgtcttagaaattagggttgttc 6949751  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||| |||||| ||||||||||||||||    
T  6949752 ttggtgtgtgtgctgaacaaagtagattc 6949780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 43215809 - 43216037
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43215809 gcagttttagtcatatctccctattttcaactccaaaaacgaatagaaatgacagttttagtccaaccacctatgttcaaccatgaaataaacaaagaat 43215908  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43215909 aaaacatgcgggtacaaagaatctactttattcagcacactaacttaatttccgagacatgttaaatacctgaaacatgtcttagaaattagggtttttc 43216008  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||||||||||    
T  43216009 ttggtttgtgtgctgaacaaagtagattc 43216037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 7 - 270
Target Start/End: Original strand, 11539703 - 11539966
Alignment:
Q  7 tcgaagaatatcgtcctgaaactatatgnnnnnnngcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtcca 106  Q
    ||||| || |||||||| ||||||||||       |||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  11539703 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtcca 11539802  T
Q  107 accacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttac 206  Q
    |||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  11539803 accacctatgctcaaccatgaaataaacaatgaataaaacatgtgggtacaaggaatctactttattcagtacactaacctaatttccgagacatgttac 11539902  T
Q  207 atacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11539903 atacctgaaacatgacttagaaattagggtttttcttggtttgtgtgctgaacaaagtagattc 11539966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 4809325 - 4809097
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  4809325 gcagttttagtcctatctccctatttccaactacaaaaaagcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 4809226  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4809225 aaaacatgtgggtacaaggaatctactttattcagcacactaacctaattcccgagacatgttacatacctgaaacatgtcttaaaaattagggtttttc 4809126  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||| ||||||    
T  4809125 ttggtttgtgtgttgaacaaagcagattc 4809097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 42 - 271
Target Start/End: Complemental strand, 38008397 - 38008168
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| |||||| |||||||||||||||||||||| | ||||||||||||||||||||||    
T  38008397 gcagttttagtcctatctccctatttccaactccataaacgcacataaatgatagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 38008298  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38008297 aaaacatgtgggtacaaggaatctactttattcagcacactaacctaatttctgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 38008198  T
Q  242 ttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||| ||||| ||||||||||| |||||    
T  38008197 ttggttagtgtgctgaacaaagtacattct 38008168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 13399866 - 13399638
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||||| ||||||| | |||||||||||||| |||||||||||||| | ||||||||||||||||||||||    
T  13399866 gcagttttagtcatatctccctatttccaactccataaacgcatagaaatgacagttttaatccaaccacctatgctcaaccatgaaataaacaaagaat 13399767  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13399766 aaaacatgtggatacaaggaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 13399667  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||||||||||    
T  13399666 ttggtttgtgtgctgaacaaagtagattc 13399638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 7 - 270
Target Start/End: Original strand, 20127802 - 20128065
Alignment:
Q  7 tcgaagaatatcgtcctgaaactatatgnnnnnnngcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtcca 106  Q
    ||||| || |||||||| ||||||||||       |||||||||||||||||||||||||| |||| ||| |||||||||||||||||| ||||||||||    
T  20127802 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaaccccagaaacgcacaaaaatgacaattttagtcca 20127901  T
Q  107 accacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttac 206  Q
    |||||||||  | |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  20127902 accacctatactcaaccatgaaataaacaaagaataaaacatgtgggtagaaggaatctactttattcagcacactaacctaatttccgagacatgttac 20128001  T
Q  207 atacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  20128002 atacctgaaacatgtcttagaaattatagtttttcttggtttgtgtgctgaacaaagtagattc 20128065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 16 - 270
Target Start/End: Complemental strand, 43160482 - 43160228
Alignment:
Q  16 atcgtcctgaaactatatgnnnnnnngcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctat 115  Q
    |||||||| ||||||||||       |||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||| ||||    
T  43160482 atcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatccaaccatctat 43160383  T
Q  116 gtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaa 215  Q
    | | ||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43160382 gatcaaccatgaaataaacaaggaataaatcatgtgggtacaatgaatctactttattcagcacactaacctaatttctgagacatgttacatacctgaa 43160283  T
Q  216 acatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43160282 acatgtcttagaaattagggtttttcttggtttgtgtgctgaacaaagtagattc 43160228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 33921057 - 33920830
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||| | |||| |||||||||||||||||    
T  33921057 gcagttttagtcctatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgctcaacc-tgaaataaacaaagaat 33920959  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33920958 aaaacatgtgggtacaaggaatctactttattcagcacactaacctaatttccgagacatgttatatacctgaaacatgtcttagaaattagggtttttc 33920859  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||  ||||||||||||||||    
T  33920858 ttggtttgtgtactgaacaaagtagattc 33920830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 42 - 267
Target Start/End: Complemental strand, 15551120 - 15550895
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| |||| | ||||||||||||||||| |||| | ||||||||||||||||||||||    
T  15551120 gcagttttagtcctatctccctatttccaactccagaaacgcacataaataatagttttagtccaaccacatatgctcaaccatgaaataaacaaagaat 15551021  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  15551020 aaaacatgtgggtacaaggaatctactttattcagcacactaacctaattttcgagacatgttacatacctgaaacatgtcttagaaattagtgtttttc 15550921  T
Q  242 ttggtttgtgtgatgaacaaagtaga 267  Q
    |||||| ||||| |||||||||||||    
T  15550920 ttggttcgtgtgctgaacaaagtaga 15550895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 4356202 - 4355973
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||| | |||| ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | || |||||||||||||||||||    
T  4356202 gcagttttaattctatttccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaagcatgaaataaacaaagaat 4356103  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaatta-gggttttt 240  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4356102 aaaacatgtgggtacaaggaatctactttattcagaacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattaggggttttt 4356003  T
Q  241 cttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||| | |||||| |||||||    
T  4356002 cttggtttgtgtgctaaacaaattagattc 4355973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 42 - 252
Target Start/End: Original strand, 13315596 - 13315807
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactcca-aaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaa 140  Q
    |||||||||||||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  13315596 gcagttttagtcctatctccctatttccaactccagaaaatgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaa 13315695  T
Q  141 taaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggttttt 240  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  13315696 taaaacacgtgggtacaaggaatctactttattcagcacactaacctaatttccgatgcatgttacatacctgaaacatgtcttagaaattatggttttt 13315795  T
Q  241 cttggtttgtgt 252  Q
    ||||||||||||    
T  13315796 cttggtttgtgt 13315807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 63057 - 63286
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  63057 gcagttttagtcctatctccctatttccaactcaagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 63156  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttc-cgagacatgttacatacc-tgaaacatgtcttagaaattagggtttt 239  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  63157 aaaacatgtgggtacaagaaatctactttattcagcacactaacctaatttcttgagacatattacataccttgaaacatgtcttagaaattagggtttt 63256  T
Q  240 tcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||| ||||||||||||||||||||||||||    
T  63257 tctt-gtttgtgtgatgaacaaagtagattc 63286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 44219744 - 44219971
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||| |||||||||||||||||||| |||||||| | ||||||||| ||||||| ||||    
T  44219744 gcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagttttagtccaatcacctatgctcaaccatgaagtaaacaaggaat 44219843  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  44219844 aaaacatgtgggtacaaggaatctactttattcagcacactaagctaattttcgagacatattacatacctgaaacatgtcttagaaattagagtttttc 44219943  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||| ||||||||||    
T  44219944 ttggtttgtgtgctgaac-aagtagattc 44219971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 42192340 - 42192570
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||||||||||| |||| | || |||||||||||||| ||||    
T  42192340 gcagttttagtcctatctccctatttctaactccagaaacgcacataaatgacagttttagtccaaccacatatgctcaatcatgaaataaacaaggaat 42192439  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattaggg--tttt 239  Q
    ||| ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||  ||||    
T  42192440 aaagcatgtgggtacaaggaatctactttattcaacacactaacctaatttctgagacatattacatacctgaaacatgtcttagaaattagggtttttt 42192539  T
Q  240 tcttggtttgtgtgatgaacaaagtagattc 270  Q
    | |||  ||||||| ||||||||||||||||    
T  42192540 ttttgtgttgtgtgctgaacaaagtagattc 42192570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 45 - 270
Target Start/End: Original strand, 16953040 - 16953262
Alignment:
Q  45 gttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaa 144  Q
    ||||||||| ||||||||||||| |||||| | ||||||||| ||||||||||||||||||||| ||||||| | |||||||||||||||||| ||||||    
T  16953040 gttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactacctatgctcaaccatgaaataaacaaaaaataaa 16953139  T
Q  145 acatgtggg-tacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttctt 243  Q
    |||| |||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16953140 acatttggggtacaagtaatctactttattcagcacactaacctaatttccgagacatgttacatatctgaaacatgtcttagaaattagggtttttctt 16953239  T
Q  244 ggtttgtgtgatgaacaaagtagattc 270  Q
    |    ||||| ||||||||||||||||    
T  16953240 g----gtgtgctgaacaaagtagattc 16953262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 94 - 270
Target Start/End: Complemental strand, 32418551 - 32418375
Alignment:
Q  94 cagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttc 193  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| || |||||||||||||||| |||||||||||||||||    
T  32418551 cagttttagtccaaccacctatgttcaaccatgaaataaacaaagaataaaacatatgggtataaggaatctactttattcaacacactaacctaatttc 32418452  T
Q  194 cgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  32418451 cgagacatgttacatacctgaaacatatcttagaaattagggtttttcttagtttgtgtgctgaacaaagtagattc 32418375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 43160110 - 43160254
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  43160110 gcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtctaaccacctatgttcaaccatgaaataaacaaggaat 43160209  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||| |||||||||| ||||    
T  43160210 aaatcatgtgggtacaaggaatctactttgttcagcacacaaacc 43160254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 4355855 - 4355999
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  4355855 gcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgttcaaccatgaaataaacaaggaat 4355954  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||| ||| || ||||||| ||||    
T  4355955 aaatcatgtgggtacaaggaatctaatttgtttagcacacaaacc 4355999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 20128179 - 20128039
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||     
T  20128179 ttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaataaat 20128080  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||||| ||||||||||| |||||||||| ||||    
T  20128079 catgtgggtacaaggaatctactttgttcagcacacaaacc 20128039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 5560996 - 5560852
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  5560996 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 5560897  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||| ||||||| ||||||||||| |||||||||| ||||    
T  5560896 aaatcatgtaggtacaaggaatctactttgttcagcacacaaacc 5560852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 38008051 - 38008195
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| ||||||| |||||| | ||||||||||||||||| ||||    
T  38008051 gcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttaatccaaccgcctatgctcaaccatgaaataaacaaggaat 38008150  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| |||||||||||||||||| |||||| |||||||||||||||    
T  38008151 aaatcatgtgggtacaaagaatgtactttgttcagcacactaacc 38008195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 16953380 - 16953241
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||| | ||||||||||||||||| ||||    
T  16953380 gcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccaactatgctcaaccatgaaataaacaaggaat 16953281  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||| |||||||||| || ||||||||||| ||||||||||    
T  16953280 aaatcatgtgggtataaggaatctactttgttcagcacac 16953241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 16175830 - 16175668
Alignment:
Q  7 tcgaagaatatcgtcctgaaactatatgnnnnnnngcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtcca 106  Q
    ||||| || |||||||| ||||||||||       |||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  16175830 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtcca 16175731  T
Q  107 accacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactt 169  Q
    |||||||||| | ||||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  16175730 accacctatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatctactt 16175668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 11540084 - 11539940
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||| ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||    
T  11540084 gcagttttagtcatatatccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaacaatgaaataaacaaggaat 11539985  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||| |||||||||| ||||    
T  11539984 aaatcatgtgggtacaaggaatctactttgttcagcacacaaacc 11539940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 33920712 - 33920856
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||    
T  33920712 gcagttttagtcctatctccctattttcaactccagaaacgcatagaaatgacagttttagtccagccacctatgctcaaccatgaaataaacaaggaat 33920811  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| || |||||||||| ||||||||||| ||||| |||| ||||    
T  33920812 aaatcacgtgggtacaaggaatctactttgttcagtacacaaacc 33920856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 42192688 - 42192549
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||| |||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  42192688 gcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 42192589  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    | | ||||||||||||| ||||||||||| ||||||||||    
T  42192588 agagcatgtgggtacaaggaatctactttgttcagcacac 42192549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 44 - 186
Target Start/End: Original strand, 4808981 - 4809123
Alignment:
Q  44 agttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataa 143  Q
    |||||||||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||    
T  4808981 agttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaataa 4809080  T
Q  144 aacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    | ||||||||||||| |||||| |||| |||| ||||| ||||    
T  4809081 atcatgtgggtacaaggaatctgctttgttcaacacacaaacc 4809123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 13399522 - 13399664
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||| |||||  |||| ||||||||||||||||||| ||||    
T  13399522 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtctaacca--tatgcttaaccatgaaataaacaaggaat 13399619  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||| | ||||||||||| |||||||||| ||||    
T  13399620 aaatcatgtgggtacgaggaatctactttgttcagcacacaaacc 13399664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 189
Target Start/End: Original strand, 17061011 - 17061156
Alignment:
Q  45 gttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaa 144  Q
    ||||||||| ||||||||||||| |||||| | ||||||||| ||||||||||||||||||||| ||||||| | |||||||||||||||||| ||||||    
T  17061011 gttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactacctatgctcaaccatgaaataaacaaaaaataaa 17061110  T
Q  145 acatgt-gggtacaaagaatctactttattcagcacactaacctaa 189  Q
    |||| | ||||||||  |||||||||||||||||||||||||||||    
T  17061111 acatttggggtacaagtaatctactttattcagcacactaacctaa 17061156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 43216155 - 43216011
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||| |||||| |||||||| ||| ||||| |||||||| |||||||||||||||||||| | |||||||||||||||||  |||    
T  43216155 gcagttttagtcctatctctctatttccaactccagaaatgcacagaaatgacaattttagtccaaccacctatgctcaaccatgaaataaacaagaaat 43216056  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||| |||||||||| ||||    
T  43216055 aaatcatgtgggtacaaggaatctactttgttcagcacacaaacc 43216011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 63404 - 63265
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||| ||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||  |||    
T  63404 gcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaagaaat 63305  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||| ||||||||||||| ||||||||||| |||| |||||    
T  63304 aaatcatgtgggtacaaggaatctactttgttcatcacac 63265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 32418257 - 32418396
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||| ||||| |||||||| ||||||||| |||||||| |||||||||||||||||||| | ||||||||||||||||| ||||    
T  32418257 gcagttttagtcatatctccttatttccaactccagaaacgcacagaaatgacatttttagtccaaccacctatgctcaaccatgaaataaacaatgaat 32418356  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||| |||||| |||||| ||||||||||| ||||||||||    
T  32418357 aaatcatgtgagtacaaggaatctactttgttcagcacac 32418396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 46 - 188
Target Start/End: Original strand, 9329985 - 9330126
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    |||||||||||||||| ||||| |||||| | ||||||||| |||||||||||| |||| |||||| |||| | ||||||||||||||||||||||||||    
T  9329985 ttttagtcctatctccttatttccaactctagaaacgcacagaaatgacagtttcagtc-aaccacttatgctcaaccatgaaataaacaaagaataaaa 9330083  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaaccta 188  Q
    |||| | |||||| |||||||||||||||||||||||||||||    
T  9330084 catgcgagtacaaggaatctactttattcagcacactaaccta 9330126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 147 - 269
Target Start/End: Original strand, 25335812 - 25335934
Alignment:
Q  147 atgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggt 246  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||| |||| ||||||||||| |||||||||| |||||||||||||||||| |||||    
T  25335812 atgtgggtacaaagaatctactttattcggcacactaatctaatttctgagatatgttacatacgtgaaacatgttttagaaattagggtttttattggt 25335911  T
Q  247 ttgtgtgatgaacaaagtagatt 269  Q
    ||||||| |||||||| ||||||    
T  25335912 ttgtgtgctgaacaaaatagatt 25335934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 22445965 - 22445867
Alignment:
Q  160 gaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaa 258  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||    
T  22445965 gaatctactttattcagcacactaatctaatttccgagacatgttacatacctgaaacatgtcttagaaattatggtttttcttggtttatgtgctgaa 22445867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 649627 - 649770
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||| || ||||||||||| |||||||| ||||||||| ||||||| ||||||||||| ||||||||| | ||||||||||||||||| ||||    
T  649627 gcagttttagttctgtctccctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgctcaaccatgaaataaacaaggaat 649725  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||| |||| ||||| ||||    
T  649726 aaatcatgtgggtacaaggaatctactttgttcaacacacaaacc 649770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 28143475 - 28143333
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||  ||| |||||||||||||| ||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||    
T  28143475 gcagttttagtcctacgtcc-tattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaatgaat 28143377  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||| ||||||||||||| ||||| ||||||||||||||||||||    
T  28143376 aaagcatgtgggtacaaggaatccactttattcagcacactaac 28143333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 15550774 - 15550918
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||| ||||||  |||| | ||| |||||||||| || |||     
T  15550774 gcagttttagtcctatttccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccatatatgctcaactatgaaataaataatgaac 15550873  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| || |||||||| |||||||||| ||||    
T  15550874 aaatcatgtgggtacaaggagtctactttgttcagcacacgaacc 15550918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 1978238 - 1978352
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| | |||| | ||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  1978238 ctccaaaaacgcagagaaatgacagttttagacctaccccatatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaaagaatccacttta 1978337  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  1978338 ttcaacacactaacc 1978352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 6949852 - 6949759
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||||||||| ||||||||||| ||||||||||    
T  6949852 aaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatctactttgttcagcacac 6949759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 18451246 - 18451133
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| |||||||||||||||| || ||||||| ||||||||||||||||||| ||||||    
T  18451246 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgcttaaccatgaaataaataaggaataaagcatgtgggtacaaagaatccacttta 18451147  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  18451146 ttcaacacactaac 18451133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 22445741 - 22445848
Alignment:
Q  43 cagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaata 142  Q
    |||||||||| |||||||||||||||||||| || |||| |||| ||||||||||||||||| ||||||||||| | ||||||||||||||||| |||||    
T  22445741 cagttttagtactatctccctattttcaacttcagaaacacacataaatgacagttttagtcaaaccacctatgctcaaccatgaaataaacaaggaata 22445840  T
Q  143 aaacatgt 150  Q
    || |||||    
T  22445841 aatcatgt 22445848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 239482 - 239596
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || | | |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  239482 ctccaaaaacgcagagaaatgacagttttagacctatcccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 239581  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  239582 ttcaccacactaacc 239596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 40027270 - 40027384
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| |||||||||| ||||||||||| |||| ||||||    
T  40027270 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaaacacgtgggtacaaataatccacttta 40027369  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  40027370 ttcaacacactaacc 40027384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 9330240 - 9330127
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||| |||||||||||||  | |||| || | ||||||||||||||||||||||||||||| | |||||||||||||||||  |||    
T  9330240 gcagttttagtcctatctacctattttcaactatagaaacacatagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaagaaat 9330141  T
Q  142 aaaacatgtgggta 155  Q
    ||| ||||||||||    
T  9330140 aaatcatgtgggta 9330127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 11090651 - 11090764
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||||| ||||||||||||||||| ||||||| || ||||||| |||||||| ||||||    
T  11090651 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgttcaaccatgaaataaacaaggaataaagcacgtgggtataaagaatccacttta 11090750  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  11090751 ttcaacacactaac 11090764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 44220089 - 44219946
Alignment:
Q  44 agttttagtcctatctccc--tattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||| ||||||||  ||||| |||||||| ||||| |||||||||| | |||||||||||||||||||| | |||||| |||||||||| ||||    
T  44220089 agttttagtcatatctccccctatttccaactccagaaacgtacaaaaatgataattttagtccaaccacctatgctcaaccataaaataaacaaggaat 44219990  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| |||||||||| || |||||||| || |||||||||| ||||    
T  44219989 aaatcatgtgggtaaaaggaatctac-ttgttcagcacacaaacc 44219946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 28616748 - 28616856
Alignment:
Q  76 aaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattca 175  Q
    ||||||||| | ||||  ||||||||| || ||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  28616748 aaaaacgcagagaaatagcagttttagacctaccccctatgttcaaccatgaaataaacaaagaataaagcatgtgggtacaaagaatccactttattca 28616847  T
Q  176 gcacactaa 184  Q
     ||||||||    
T  28616848 acacactaa 28616856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 78 - 185
Target Start/End: Complemental strand, 26538487 - 26538381
Alignment:
Q  78 aaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagc 177  Q
    ||||||| | ||||||||||||||| || ||| |||||||| ||||||||||||||||| ||||||| ||||||||||||||||||  ||||||||||||    
T  26538487 aaacgcagagaaatgacagttttagacctacc-cctatgttcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaattcactttattcagc 26538389  T
Q  178 acactaac 185  Q
    ||||||||    
T  26538388 acactaac 26538381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 40815760 - 40815646
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || |||  ||||| | ||||||||||||||||| ||||||| |||||||||||||| |||| ||||||    
T  40815760 ctccaaaaacgcagagaaatgacagttttagacctaccctctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaataatccacttta 40815661  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  40815660 ttcaacacactaacc 40815646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 8425775 - 8425675
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  8425775 ctccaaaaacgcagagaaatgacagttttagacctacc-cctatgattaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 8425677  T
Q  172 tt 173  Q
    ||    
T  8425676 tt 8425675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 184
Target Start/End: Original strand, 43058463 - 43058575
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||| | | ||||||||||||||| || ||| |||||| | || |||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  43058463 ctccaaaaacgtagagaaatgacagttttagacctaccccctatgctcaatcatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 43058562  T
Q  172 ttcagcacactaa 184  Q
    |||| ||||||||    
T  43058563 ttcaacacactaa 43058575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 25336032 - 25335909
Alignment:
Q  63 tattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaa 162  Q
    ||||| ||||| ||||||  |||| |||||||| |||||||||||||||||||| | || |||||||||| ||| ||||||| |||||||||||||| ||    
T  25336032 tatttccaactacaaaaattcacataaatgacacttttagtccaaccacctatgctcaatcatgaaataagcaaggaataaatcatgtgggtacaaataa 25335933  T
Q  163 tctactttattcagcacactaacc 186  Q
    |||| ||| |||||||||| ||||    
T  25335932 tctattttgttcagcacacaaacc 25335909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 3025599 - 3025708
Alignment:
Q  76 aaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattca 175  Q
    ||||||||| | ||||||||||||||| || ||| |||||| | |||||||||||||| || ||||||| |||| |||||||||||||| ||||||||||    
T  3025599 aaaaacgcaaagaaatgacagttttagacctaccccctatgctcaaccatgaaataaataaggaataaagcatgcgggtacaaagaatccactttattca 3025698  T
Q  176 gcacactaac 185  Q
     |||||||||    
T  3025699 acacactaac 3025708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 7446471 - 7446589
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagtt----ttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctac 167  Q
    ||||||||||||| | |||||||||||    |||| |  ||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  7446471 ctccaaaaacgcagagaaatgacagttaattttagacataccccctatgttcaaccatgaaataaacaaggaataaaacatgtgggtacaaagaatccac 7446570  T
Q  168 tttattcagcacactaacc 186  Q
    |||||||| || |||||||    
T  7446571 tttattcaccatactaacc 7446589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 210 - 270
Target Start/End: Original strand, 5560818 - 5560878
Alignment:
Q  210 cctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5560818 cctgaaacatgtcttagaaattagggtttttcttggtttgtgtgctgaacaaagtagattc 5560878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 5560162 - 5560230
Alignment:
Q  148 tgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaac 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  5560162 tgtgggtacaaagaatctactttattcagcacactaacctaa-ttccaagacatgttacatacatgaaac 5560230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 14432272 - 14432386
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||  | |||||||||||||||||  |||||| || || |||||||||||||  |||||    
T  14432272 ctccaaaaacgcagagaaatgacagttttagacctaccccctatactcaaccatgaaataaacaagaaataaagcaggtaggtacaaagaatcctcttta 14432371  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  14432372 ttcaacacactaacc 14432386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 22374450 - 22374564
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||||| |||||||| || | |  ||||| | ||| ||||||||||||| ||||||| ||||||||||||||||||  ||||||    
T  22374450 ctccaaaaacgcaaagaaatgatagttttagacctaacctctatgctcaactatgaaataaacaaggaataaagcatgtgggtacaaagaattcacttta 22374549  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  22374550 ttcaacacactaacc 22374564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 7446710 - 7446638
Alignment:
Q  113 tatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||| ||||||||||||| ||||| |||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  7446710 tatgcttaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattttattcagcacactaac 7446638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 40027504 - 40027432
Alignment:
Q  113 tatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| ||||||||||| ||||| ||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  40027504 tatgttcaaccatgaaatcaacaaggaataaaacatgtgggtacaaggaatctattctattcagcacactaac 40027432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 649803 - 649744
Alignment:
Q  210 cctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  649803 cctgaaatatgtcttagaaattagggtttt-cttggtttgtgtgttgaacaaagtagattc 649744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 18451009 - 18451084
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||| ||||| ||||| |||||||||||||||| |||||||||||| | |||||||||||||||||    
T  18451009 cctatgctcaaccacgaaatcaacaaggaataaaacatgtgggcacaaagaatctattctattcagcacactaacc 18451084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 3025820 - 3025754
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||| ||||||||||||||||| |||| |||| ||||||| | |||||||||||||||||    
T  3025820 aaccatgaaatcaacaaagaataaaacatttgggcacaaggaatctattctattcagcacactaacc 3025754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 22374691 - 22374617
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  22374691 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctattcagcacactaac 22374617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 26538227 - 26538340
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    |||||||||| || | |||| |||||||||| || | |  ||||| | || ||||||||||| || ||||||||||||||||||||||||| | ||||||    
T  26538227 ctccaaaaacacagagaaataacagttttagacctatcctctatgctcaatcatgaaataaataaggaataaaacatgtgggtacaaagaa-ccacttta 26538325  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  26538326 ttcaacacactaacc 26538340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 239709 - 239645
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaa 184  Q
    ||||||||||| |||||| ||||||||||||||| ||||| |||||| | |||||||||||||||    
T  239709 aaccatgaaatcaacaaaaaataaaacatgtgggcacaaataatctattatattcagcacactaa 239645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 8425532 - 8425607
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaa-taaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||||| ||||||||||| ||||| ||| |||||||||||||||||| ||||||| | ||| ||||||||||||    
T  8425532 cctatgttcaaccatgaaatcaacaaggaaataaaacatgtgggtacaaggaatctattctatccagcacactaac 8425607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 43058699 - 43058624
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| ||||  |||||| | |||||||||||||||||    
T  43058699 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaataaatctattatattcagcacactaacc 43058624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 1978466 - 1978400
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||| | |||||||||||| ||||    
T  1978466 aaccatgaaattaacaaggaataaaacatgtgggcacaaggaatctattatattcagcacaccaacc 1978400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 11090877 - 11090811
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||| || || |||||||||||||||| |||| ||||||| | |||||||||||||||||    
T  11090877 aaccatgaaatcaataaggaataaaacatgtgggcacaaggaatctattatattcagcacactaacc 11090811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 40815524 - 40815598
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||||||| | ||||||||||| ||||    
T  40815524 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctattcagcacagtaac 40815598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 24140125 - 24140064
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagt 103  Q
    ||||||||||| |||| ||||||||| |||||||| ||||||||| |||||||| |||||||    
T  24140125 gcagttttagttctatatccctatttccaactccagaaacgcacagaaatgacatttttagt 24140064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 18451100 - 18451159
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| || ||| ||||| |||| ||||| ||||||    
T  18451100 tgaaacatatcttagaaattagggtttttttttgttagtgtgttgaataaagtggattct 18451159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 24140063 - 24140004
Alignment:
Q  89 aatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacat 148  Q
    ||||||| | ||||| |||||||||||| | ||||||||| ||||||| |||||||||||    
T  24140063 aatgacattattagttcaaccacctatgctcaaccatgaagtaaacaaggaataaaacat 24140004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 31797223 - 31797166
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagtttt 100  Q
    ||||||||||||||| |||| |||||||||||| | ||||||| | |||||||||||||    
T  31797223 gcagttttagtcctacctcc-tattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 40027415 - 40027359
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagatt 269  Q
    |||||||| ||||||||||||||| ||||||||||| ||||| |||| ||||| ||||    
T  40027415 tgaaacatatcttagaaattaggg-ttttcttggttagtgtgttgaataaagtggatt 40027359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 40815615 - 40815671
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagatt 269  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||    
T  40815615 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggatt 40815671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 16175589 - 16175629
Alignment:
Q  164 ctactttattcagcacactaacctaatttccgagacatgtt 204  Q
    ||||||||||||||||||||| |||||||  ||||||||||    
T  16175589 ctactttattcagcacactaatctaatttttgagacatgtt 16175629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 22374595 - 22374544
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagt 264  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| |||||    
T  22374595 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagt 22374544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 42 - 271
Target Start/End: Complemental strand, 45838993 - 45838764
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||||| |||| | | ||||||||||||||||||||    
T  45838993 gcagttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacatatgctcagccatgaaataaacaaagaat 45838894  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45838893 aaaacatgtgggtacaaagaatctactttattcagcatactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 45838794  T
Q  242 ttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||||||| |||||||||||||||||    
T  45838793 ttggtttgtgtgctgaacaaagtagattct 45838764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 14440274 - 14440046
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  14440274 gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 14440175  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14440174 aaaacatgtgggtacaaggaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 14440075  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    ||| |||||||| ||||||||||||||||    
T  14440074 ttgatttgtgtgctgaacaaagtagattc 14440046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 34789482 - 34789710
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||| |||||||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  34789482 gcagttttagtcctatctccctatttcaaactccagaaacgcacataaatgacaattttagtccaaccacctatgctcaaccatgaaataaacaaagaat 34789581  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34789582 aaaacatgtgggtacaagaaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 34789681  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||||||||||    
T  34789682 ttggtttgtgtgctgaacaaagtagattc 34789710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 35643667 - 35643895
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  35643667 gcagttttagtcctatctccctatttacaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 35643766  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||    
T  35643767 aaaacatgtgggtacaaggaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaatttttttttttc 35643866  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||||||||||    
T  35643867 ttggtttgtgtgctgaacaaagtagattc 35643895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 24851565 - 24851793
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  24851565 gcagttttagtcttatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgttcagccatgaaataaacaaagaat 24851664  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||| ||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  24851665 aaaacatatgggtacaaggaatctacttaattcagcacacaaacctaatttccgagacatgttacatacctgaaacatgtcttataaattaggggttttc 24851764  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||||||||||    
T  24851765 ttggtttgtgtgctgaacaaagtagattc 24851793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 46 - 270
Target Start/End: Complemental strand, 28465523 - 28465299
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||||  ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  28465523 ttttagtcctatctccctatttccaactccataaacgcacataaatagcagttttagtccaaccacctatgctcaaccatgaaataaacaaagaataaaa 28465424  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttgg 245  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28465423 catgtggatacaaggaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttgg 28465324  T
Q  246 tttgtgtgatgaacaaagtagattc 270  Q
    ||| |||| ||||||||||||||||    
T  28465323 tttatgtgctgaacaaagtagattc 28465299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 46737101 - 46736873
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||| ||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  46737101 gcagttttagtcatatcttcctatctccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctaaaccatgaaataaacaaagaat 46737002  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46737001 aaaacatgtgggtacaaggaatctactttatttagcacactaacctaatttccgagacatgttacatacgtgaaacatgtcttagaaattagggtttttc 46736902  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||||||||||    
T  46736901 ttggtttgtgtgctgaacaaagtagattc 46736873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 54441015 - 54440787
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||   |||||||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  54441015 gcagttttagtcctatctccctatttccaactccagaaacgcacgtcaatgacagttttagtccaaccacctatgctcaactatgaaataaacaaagaat 54440916  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54440915 aaaacatgtgggtacaaggaatctactttattcaacacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 54440816  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    ||| |||||||| ||||||||||||||||    
T  54440815 ttgatttgtgtgctgaacaaagtagattc 54440787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 43 - 269
Target Start/End: Original strand, 26974385 - 26974611
Alignment:
Q  43 cagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaata 142  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||||| ||||| | |||||| ||||||||||||||||    
T  26974385 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccaactatgctcaaccataaaataaacaaagaata 26974484  T
Q  143 aaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttct 242  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26974485 aaacatgtgggtacaagaaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattaggatttttct 26974584  T
Q  243 tggtttgtgtgatgaacaaagtagatt 269  Q
    ||||||||||| |||||||||||||||    
T  26974585 tggtttgtgtgctgaacaaagtagatt 26974611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 46 - 270
Target Start/End: Original strand, 12593128 - 12593351
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    ||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  12593128 ttttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaacaacctatgttcaac-atgaaataaacaaagaataaaa 12593226  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttgg 245  Q
    ||| ||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12593227 catctgggtacaaggaatccactttattcaacacactaacctaatttccgagacatgttacatacctcaaacatgtcttagaaattagggtttttcttgg 12593326  T
Q  246 tttgtgtgatgaacaaagtagattc 270  Q
    |||||||| ||||||||||||||||    
T  12593327 tttgtgtgttgaacaaagtagattc 12593351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 48 - 269
Target Start/End: Original strand, 6616779 - 6616999
Alignment:
Q  48 ttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaaca 147  Q
    ||||||||| ||| |||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| |  ||||||||||||| |||||||||||||    
T  6616779 ttagtcctacctctctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgctctaccatgaaataaagaaagaataaaaca 6616878  T
Q  148 tgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtt 247  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6616879 tttgggtacaaagaatctactt-attcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtt 6616977  T
Q  248 tgtgtgatgaacaaagtagatt 269  Q
    |||||| |||||||||||||||    
T  6616978 tgtgtgctgaacaaagtagatt 6616999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 34807585 - 34807357
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||| | |||||||||||||||||||||||| |||| | ||||||||||||||||||||||    
T  34807585 gcagttttagtcctatctccctatttccaactccataaacgcatagaaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaaagaat 34807486  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||||   ||||||||||||||||||||||||||||||| |||||||||||||||    
T  34807485 aaaacatgtgggtacaaggaatctactttattcagcacactaaacaaattaaagagacatgttacatacctgaaacatgtcttaaaaattagggtttttc 34807386  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||||||||||    
T  34807385 ttggtttgtgtgctgaacaaagtagattc 34807357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 43 - 270
Target Start/End: Original strand, 21034337 - 21034564
Alignment:
Q  43 cagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaata 142  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  21034337 cagttttagtcatatctccctatttccaactccataaacgcacataaatgacagttttagtccaaccacctacgttcaaccatcaaataaacaaagaata 21034436  T
Q  143 aaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttct 242  Q
    ||| ||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  21034437 aaatatgtgggtacaagaaatctactttatttagcacactaacctaatttccgagacatgttacatatctgaaatatgtcttagaaattagggtttttct 21034536  T
Q  243 tggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||  |||||||||||||||    
T  21034537 tggtttgtgtgccgaacaaagtagattc 21034564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 36168774 - 36168550
Alignment:
Q  45 gttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaa 144  Q
    |||||||||||||||||||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||| | |||||| ||||||||||||||||||    
T  36168774 gttttagtcctatctccctattttcaactccataaatgcacataaatcacagttttagtccaaccacctatgctcaaccataaaataaacaaagaataaa 36168675  T
Q  145 acatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttg 244  Q
    | ||||||||||||  |||||||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  36168674 atatgtgggtacaagaaatctactttattcagcacactaatctaattttcgagatatgttacatacttgaaacatgtattagaaattagggtttttcttg 36168575  T
Q  245 gtttgtgtgatgaacaaagtagattc 270  Q
    | ||||||| ||||||||||||||||    
T  36168574 g-ttgtgtgctgaacaaagtagattc 36168550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 88 - 270
Target Start/End: Original strand, 33777768 - 33777950
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacct 187  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  33777768 aaatgagagttttagtccaaccacctatgttcaaccatgaaataaacaaggaataaaacatgtgggtacaaggaatttactttattcagcacactaacct 33777867  T
Q  188 aatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||    
T  33777868 aatttccgagacaggttacatacctgaaacatgtcttagaaattaaggtttttcttggtttgtgtgctaaacaaagtagattc 33777950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 34789828 - 34789684
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  34789828 gcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 34789729  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||    
T  34789728 aaaacatgtgggtacaaggaatctactttgttcagcacacaaacc 34789684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 42 - 271
Target Start/End: Complemental strand, 229605 - 229378
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||| ||||| |||| |||||||||||||| ||||||||| || ||||| ||||||| |||||||||||| | |||||||||||||| || ||||    
T  229605 gcagttttaatcctacctccttattttcaactccagaaacgcacagaagtgacaattttagtacaaccacctatgctcaaccatgaaataaataaggaat 229506  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||| ||||||| ||||| ||||||||||||||||||| |||||||||||| |  || |||||||||||| |||||||||||||||||||| |||||||      
T  229505 aaagcatgtggatacaaggaatctactttattcagcagactaacctaattactaagtcatgttacatacatgaaacatgtcttagaaatttgggttttat 229406  T
Q  242 ttggtttgtgtgatgaacaaagtagattct 271  Q
    ||  || ||||| |||| ||||||||||||    
T  229405 tt--ttagtgtgctgaataaagtagattct 229378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 28465181 - 28465319
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  28465181 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 28465280  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcaca 180  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  28465281 aaaacatgtgggtacaaggaatctactttgttcagcaca 28465319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 14439928 - 14440067
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  14439928 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 14440027  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||| ||| ||||||||| ||||||||||| ||||||||||    
T  14440028 aaatcatatgggtacaaggaatctactttgttcagcacac 14440067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 18965240 - 18965464
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||| ||| |||| |||||||||||| | ||||||| | |||||||||||||||||||||    |||| | |||||||||||||| || ||||    
T  18965240 gcagttttagttctacctccttattttcaactctagaaacgcatataaatgacagttttagtccaac----tatgctcaaccatgaaataaataaggaat 18965335  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||| ||||||||||||| ||||||| ||||||||||| | |||||||||| |  |||||||||||||||||||||||||||||||||| | | ||||||     
T  18965336 aaagcatgtgggtacaaggaatctattttattcagcagattaacctaattactaagacatgttacatacctgaaacatgtcttagaaaattgagtttttt 18965435  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    || |||  |||| |||| |||||||||||    
T  18965436 tttgttaatgtgctgaataaagtagattc 18965464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 54440669 - 54440808
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  54440669 gcagttttagtcctatctccctattttcaacttcagaaatgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 54440768  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||| ||||||||||||| ||||||||||| ||||||||||    
T  54440769 aaatcatgtgggtacaaggaatctactttgttcagcacac 54440808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 42 - 176
Target Start/End: Complemental strand, 56077770 - 56077636
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||  |||    
T  56077770 gcagttttagtcctatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccacctatgcccaaccatgaaataaacaagaaat 56077671  T
Q  142 aaaacatgtgggtacaaagaatctactttattcag 176  Q
    ||||||||||||||||| |||||||||||||||||    
T  56077670 aaaacatgtgggtacaaggaatctactttattcag 56077636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 55677399 - 55677259
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||||| |||||||     
T  55677399 ttttagtcctatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcacctatgctcaaccatgaaataaacaaggaataaat 55677300  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||||||||||| |||||||||| |||||||||| ||||    
T  55677299 catgtgggtacaaaaaatctactttgttcagcacacaaacc 55677259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 42 - 184
Target Start/End: Original strand, 229261 - 229403
Alignment:
Q  42 gcagttttagtcctatctccc-tattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaa 140  Q
    ||||||||||| ||| ||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||| | |||||||||||||| || |||    
T  229261 gcagttttagttcta-ctcccttattttcaactccataaacgcacaaaagtgacagttttagtccaaccacctatgctcaaccatgaaataaataaggaa 229359  T
Q  141 taaaacatgtgggtacaaagaatctactttattcagcacactaa 184  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  229360 taaaacatgtgagtacaaagaatctactttattcagcacactaa 229403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 12593469 - 12593325
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||| |||| | |||||||||||||| || ||||    
T  12593469 gcagttttagtcctatctccctattttcaactccagaaacgcacaggaatgacagttttagtccaaccacatatgctcaaccatgaaataaataaggaat 12593370  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||| |||| ||||| ||||    
T  12593369 aaatcatgtgggtacaaggaatctactttgttcaacacacaaacc 12593325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 21034682 - 21034538
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||| | ||||||||||| ||||| ||||    
T  21034682 gcagttttagttctatctccctatttccaactccagaaacacacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaatgaacaaggaat 21034583  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||| ||| |||||| ||||    
T  21034582 aaatcatgtgggtacaaggaatctactttgttcggcacacaaacc 21034538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 45838647 - 45838791
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| | ||| |||||||||||| |||||| |||||| ||||||||||||||| | ||||||||||||||||| ||||    
T  45838647 gcagttttagtcctatctccctatttcctacttcaaaaacgcacagaaatgatagtttttgtccaaccacctatgctcaaccatgaaataaacaaggaat 45838746  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||| ||||||||||||||||||| |||||||||| ||||    
T  45838747 aaatcatgtaggtacaaagaatctactttgttcagcacacaaacc 45838791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 46736755 - 46736899
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||| |||||| ||||||||||||||||| ||||    
T  46736755 gcagatttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccacttatgttcaaccatgaaataaacaaggaat 46736854  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||  |||||||||||| ||||||||||| |||||||||| ||||    
T  46736855 aaattatgtgggtacaaggaatctactttgttcagcacacaaacc 46736899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 28166104 - 28166235
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||| | |||||||||||| | ||||||||||||||||||||||    
T  28166104 gcagttttagtcctatctccctattttcaactacaaaaacgcacagaaatgatagttttaattcaaccacctatgctcaaccatgaaataaacaaagaat 28166203  T
Q  142 aaaacatgtgggtacaaa-gaatctactttat 172  Q
    ||||||| |||||||||| |||||||||||||    
T  28166204 aaaacatatgggtacaaaggaatctactttat 28166235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 42 - 163
Target Start/End: Original strand, 41608475 - 41608596
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  41608475 gcagttttagtcctatctccatatttccaacttcaaaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 41608574  T
Q  142 aaaacatgtgggtacaaagaat 163  Q
    ||| ||||||||||||| ||||    
T  41608575 aaatcatgtgggtacaaggaat 41608596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 17504074 - 17504217
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||| |||| |||||||||||||| ||||| | | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||    
T  17504074 gcagttttagtcctacctcc-tattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaat 17504172  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||    
T  17504173 aaaacatgtgggtacaaggaatctactctattcagcacactaacc 17504217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 24851911 - 24851767
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||  |||||| |||||||| ||||||||| |||||| ||||||||| |||||||||||| | ||||||||||||||||| ||||    
T  24851911 gcagttttagtcctatctttctatttccaactccagaaacgcacagaaatgaaagttttagtacaaccacctatgctcaaccatgaaataaacaaggaat 24851812  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||| ||||||| ||||||||||| |||||||||| ||||    
T  24851811 aaatcatgttggtacaaggaatctactttgttcagcacacaaacc 24851767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 60 - 185
Target Start/End: Complemental strand, 18965564 - 18965439
Alignment:
Q  60 ccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaa 159  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||| | || | |||||||||||||| || |||||||||||||| ||||||     
T  18965564 ccctattttcaactccataaacgcacataaatgacagttttagtccaaccacatctgctcaaccatgaaataaataaggaataaaacatgtgagtacaag 18965465  T
Q  160 gaatctactttattcagcacactaac 185  Q
    ||||||||||||||||||||| ||||    
T  18965464 gaatctactttattcagcacattaac 18965439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 42 - 163
Target Start/End: Original strand, 34807217 - 34807338
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | |||||||||||| |||| ||||    
T  34807217 gcagttttagtcctatctccatatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaatagacaaggaat 34807316  T
Q  142 aaaacatgtgggtacaaagaat 163  Q
    ||| ||||||||||||| ||||    
T  34807317 aaatcatgtgggtacaaggaat 34807338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 36168432 - 36168571
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||||||||||||  ||||||| ||||||| | ||||||||||| ||||||||||||||||||| || |||||||||||||| ||||    
T  36168432 gcagttttagtcttatctccctatttctaactccagaaacgcatataaatgacagttatagtccaaccacctatgttcaatcatgaaataaacaaggaat 36168531  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||| | |||||||| || ||||||||||| ||||||||||    
T  36168532 aaatcttgtgggtataaggaatctactttgttcagcacac 36168571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 56077522 - 56077640
Alignment:
Q  97 ttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccga 196  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||||| |||| |||||||| ||||||||||| |||||||| |||||||||||||| |    
T  56077522 ttttagtccaaccacctatgctcaaccatgaaataaacaaggaataaatcatgggggtacaaggaatctactttgttcagcacgctaacctaatttccaa 56077621  T
Q  197 gacatgttacatacctgaa 215  Q
    ||||| |||||||||||||    
T  56077622 gacattttacatacctgaa 56077640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 35193408 - 35193546
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||| ||||||||||| || ||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||    
T  35193408 gcagttttagtcctatctcc-tattttcaacttcagaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaat 35193506  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||||||||||||||||| ||| | |||||||||| |||||    
T  35193507 aaaacatgtgggtacaaggaacccactttattcaacacac 35193546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 12503851 - 12503737
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  12503851 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaagaataaagcatgtgggtacaaagaatccacttta 12503752  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  12503751 ttcaacacactaacc 12503737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 42 - 151
Target Start/End: Complemental strand, 16214941 - 16214832
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||| | |||||| |||||||||||||||| |||| |||| |||||| |||||||||||||||||||||| | ||||||||||||||||||||||    
T  16214941 gcagttttaattctatcttcctattttcaactccagaaacacacataaatgatagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 16214842  T
Q  142 aaaacatgtg 151  Q
    ||||||||||    
T  16214841 aaaacatgtg 16214832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 15523649 - 15523535
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| ||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||    
T  15523649 ctccaaaaacgcaaagaaatgacagttttagacctaccccctatgcttaaccatgaaataaacaaggaataaagcatgtgggtacaaataatccacttta 15523550  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  15523549 ttcaacacactaacc 15523535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 25937800 - 25937914
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| | |||| | ||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  25937800 ctccaaaaacgcagagaaatgacagttttagacctaccccatatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaaagaatccacttta 25937899  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  25937900 ttcaacacactaacc 25937914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 44 - 186
Target Start/End: Original strand, 24335864 - 24336002
Alignment:
Q  44 agttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataa 143  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||   | |||||||||| | ||||||||||||||||| ||||||    
T  24335864 agttttagtccta-caccctattttcaactccaaaaacgcacataaatgacagtttta--actaccacctatgctcaaccatgaaataaacaaggaataa 24335960  T
Q  144 aacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    | |||||| ||||||  ||||||| ||||||| ||||||||||    
T  24335961 agcatgtgagtacaagcaatctac-ttattcaacacactaacc 24336002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 6617072 - 6616974
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||| |||||||||||||  |||||||||| |||||||||| ||||    
T  6617072 aaatgacagttttagtccaaccgcctatgttcaaccatgaaataaacaaggaataaatcatgtgggtacaagaaatctactttgttcagcacacaaacc 6616974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 22434593 - 22434490
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  22434593 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 22434494  T
Q  172 ttca 175  Q
    ||||    
T  22434493 ttca 22434490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 12234459 - 12234573
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| |||||||||  || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  12234459 ctccaaaaacgcagagaaataacagttttaaacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 12234558  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  12234559 ttcaacacactaacc 12234573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 18752017 - 18751903
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||| ||| | |||| |||||||||| || ||| |||||| | ||||||||||||||||||||||||| ||||||||||||||||||  ||||||    
T  18752017 ctccaaaaatgcagagaaataacagttttagacctaccccctatgctcaaccatgaaataaacaaagaataaagcatgtgggtacaaagaattcacttta 18751918  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  18751917 ttcaacacactaacc 18751903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 136
Target Start/End: Original strand, 33689928 - 33690022
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaa 136  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||| |||||||||| |||||||||||||||||  | |||||||||||||||||    
T  33689928 gcagttttagtcatatctccctatttacaactccagaaacgcacataaatgacagtgttagtccaaccacctatactcaaccatgaaataaacaa 33690022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 33778022 - 33777924
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||| ||||||||||||| ||||||||||| || ||||||| ||||    
T  33778022 aaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatctactttgtttagcacacaaacc 33777924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 4219687 - 4219800
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||  || | | |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  4219687 ctccaaaaacgcagagaaatgacagttttaaacctatcccctatgctcaaccatgaaataaacaatgaataaagcatgtgggtacaaagaatccacttta 4219786  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  4219787 ttcaacacactaac 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 11153562 - 11153449
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| |||||||||| |  ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  11153562 ctccaaaaacgcagagaaataacagttttagacttaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 11153463  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  11153462 ttcaacacactaac 11153449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 23494573 - 23494686
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||| ||||| | ||||||||||||||| || ||| | |||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  23494573 ctccaaacacgcagagaaatgacagttttagacctacctcatatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 23494672  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  23494673 ttcaacacactaac 23494686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 46193820 - 46193707
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||| | | || |||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  46193820 ctccaaaaacgtagagaattgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 46193721  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  46193720 ttcaacacactaac 46193707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 180
Target Start/End: Complemental strand, 17504382 - 17504267
Alignment:
Q  65 ttttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatc 164  Q
    |||||||||| | ||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||| |||||    
T  17504382 ttttcaactctagaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaggaatc 17504283  T
Q  165 tactttattcagcaca 180  Q
     |||||||||| ||||    
T  17504282 cactttattcaacaca 17504267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 19529139 - 19529036
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||| |||||||| ||||| |||||  ||||||||||| ||||||||||||||||||||||| ||||| | |||||||||||||| || ||||    
T  19529139 gcagttttagttctatctccatatttccaacttaaaaaacgcacagaaatgacagttttagtccaaccatctatgctcaaccatgaaataaataaggaat 19529040  T
Q  142 aaaa 145  Q
    ||||    
T  19529039 aaaa 19529036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 24336204 - 24336066
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    ||||||||||| | || |||||||||||||| ||||| | | ||||| ||| |||||||| | ||| |||| | |||||||||||||| || |||||||     
T  24336204 ttttagtcctacc-ccatattttcaactccagaaacgtatagaaatggcagctttagtcctatcacatatgctcaaccatgaaataaataaggaataaag 24336106  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  24336105 catgtgggtacaagtaatctactttattcagcacactaac 24336066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 186
Target Start/End: Complemental strand, 35643960 - 35643869
Alignment:
Q  95 agttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||||||||| |||| | ||||||||||||||||| ||||||| ||||||||||||| ||||||||||| |||||||||| ||||    
T  35643960 agttttagtccaaccacttatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatctactttgttcagcacacaaacc 35643869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 2118711 - 2118598
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| | |||||||| || ||| |||||| | ||||||||||||||||| ||||||||||||||||||||||||||| | ||||    
T  2118711 ctccaaaaacgcagagaaataatagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaaagaatccatttta 2118612  T
Q  172 ttcagcacactaac 185  Q
    | || |||||||||    
T  2118611 tacaacacactaac 2118598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 186
Target Start/End: Original strand, 51020930 - 51021041
Alignment:
Q  75 caaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattc 174  Q
    |||||||| | | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| |||||| ||||||| |||| |||||||||    
T  51020930 caaaaacgtagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgagtacaaataatccactttattc 51021029  T
Q  175 agcacactaacc 186  Q
    | ||||||||||    
T  51021030 aacacactaacc 51021041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 54995479 - 54995369
Alignment:
Q  76 aaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattca 175  Q
    ||||||||| | |||||| |||||||| || |||||||||| | ||| ||||||||||||| ||||||| ||||||||||||||||||| |||||||| |    
T  54995479 aaaaacgcaaagaaatgatagttttagacctaccacctatgctcaactatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattta 54995380  T
Q  176 gcacactaacc 186  Q
      |||||||||    
T  54995379 atacactaacc 54995369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 41114259 - 41114344
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatga 127  Q
    |||||||||||| ||||||||||||| |||||| | ||||||||| |||||||| |||||||||||||||||||| | ||||||||    
T  41114259 gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccacctatgctcaaccatga 41114344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 40160194 - 40160337
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||| |||| |||||||||||| | ||||    | ||||||||||||||| || ||| |||||| | ||| ||||||||||||| ||||    
T  40160194 gcagttttagtcctacctcc-tattttcaactctataaacatggagaaatgacagttttagacctaccccctatgctcaactatgaaataaacaacgaat 40160292  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    | |||||||| |||||| ||||| |||||||| | ||||||||||    
T  40160293 acaacatgtgagtacaaggaatccactttatttaacacactaacc 40160337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 48526325 - 48526439
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||| ||| | |||||||||||||||  | ||| |||||| | |||| ||||||||||||  |||||| ||||||| |||||| |||| ||||||    
T  48526325 ctccaaaaatgcagagaaatgacagttttagatctaccccctatgctcaaccttgaaataaacaagaaataaagcatgtggatacaaataatccacttta 48526424  T
Q  172 ttcagcacactaacc 186  Q
    |||||||||||||||    
T  48526425 ttcagcacactaacc 48526439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 19528970 - 19529033
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtcc 105  Q
    |||||||||||||||||||||||||| |||||||  ||||||||| ||||||||||||||||||    
T  19528970 gcagttttagtcctatctccctatttccaactccggaaacgcacagaaatgacagttttagtcc 19529033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 186
Target Start/End: Complemental strand, 38962231 - 38962122
Alignment:
Q  75 caaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattc 174  Q
    |||||||||| | ||||||||||||||| || ||| |||||| | ||| || |||||||||||||||||| ||| ||| ||||||||||| |||||||||    
T  38962231 caaaaacgcagagaaatgacagttttagacctacc-cctatgctcaactataaaataaacaaagaataaagcatctgg-tacaaagaatccactttattc 38962134  T
Q  175 agcacactaacc 186  Q
    | ||||||||||    
T  38962133 aacacactaacc 38962122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 26974664 - 26974586
Alignment:
Q  108 ccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||| | ||||||||||||||||| ||||||| |||||||||||||  |||||||||| |||||||||| ||||    
T  26974664 ccacctatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaagaaatctactttgttcagcacacaaacc 26974586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 54995257 - 54995323
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  54995257 aaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattttattcagcacactaacc 54995323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 12503615 - 12503688
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaa 184  Q
    |||||| | ||||||||||| |||||||||||||||||||||| |||| ||||||| | |||||||||||||||    
T  12503615 cctatgctcaaccatgaaatcaacaaagaataaaacatgtgggcacaaggaatctattctattcagcacactaa 12503688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 10795709 - 10795618
Alignment:
Q  94 cagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||| || ||| |||||| | || ||||||||||||||| |||||| ||||||||| ||| ||||| ||||| ||||||||||||||    
T  10795709 cagttttagacctaccccctatgctcaagcatgaaataaacaaataataaagcatgtgggtgcaatgaatccactttgttcagcacactaac 10795618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 23494809 - 23494734
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||||||| | |||||||||||||||||    
T  23494809 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctattcagcacactaacc 23494734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 45082790 - 45082715
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||||||| | |||||||||||||||||    
T  45082790 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctattcagcacactaacc 45082715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 55677233 - 55677284
Alignment:
Q  218 atgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagatt 269  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  55677233 atgtcttagaaattagggcttttcttggtttgtgtgctgaacaaagtagatt 55677284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 22170352 - 22170243
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| |  ||| |||||| | ||||||     |||||| ||||||||||||||||||||||||||| | ||||    
T  22170352 ctccaaaaacgcagagaaatgacagttttagacgtaccccctatgctcaaccat-----aaacaaggaataaaacatgtgggtacaaagaatccatttta 22170258  T
Q  172 ttcagcacactaacc 186  Q
    || | ||||||||||    
T  22170257 ttgaacacactaacc 22170243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 48526539 - 48526473
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||| | |||||||||||||||||    
T  48526539 aaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctattcagcacactaacc 48526473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 4219925 - 4219856
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcaca 180  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||||| |||||||||||||||    
T  4219925 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatccactttattcagcaca 4219856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 35193658 - 35193598
Alignment:
Q  124 atgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||| |||||    
T  35193658 atgaaataaacaaagaataaa-catgtgggtacaaggaatctactctattcagcacgctaac 35193598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 25447612 - 25447548
Alignment:
Q  122 ccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||||||||| || ||||||| || |||||||||||||||| |||||||||| ||||||||||    
T  25447612 ccatgaaataaataaggaataaagcacgtgggtacaaagaatccactttattcaacacactaacc 25447548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 40160475 - 40160383
Alignment:
Q  94 cagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||| |  ||| |||||| | |||||| |||||||||| |||||||||||||||||||||  |||||||| ||||||||  |||||||    
T  40160475 cagttttagactcaccccctatgctcaaccattaaataaacaaggaataaaacatgtgggtacaagaaatctactctattcagctgactaacc 40160383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 2118473 - 2118548
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| |||||  ||||||||||||||| |||| ||||||| | |||||||||||||||||    
T  2118473 cctatgctcaaccatgaaatcaacaagaaataaaacatgtgggcacaaggaatctattctattcagcacactaacc 2118548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 15523414 - 15523489
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||| ||||| |||| ||||||| | |||||||||||||||||    
T  15523414 cctatgctcaaccatgaaatcaacaaggaataaaacacgtgggcacaatgaatctattctattcagcacactaacc 15523489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 46193584 - 46193659
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| ||||||||||||| || |||| ||||||| | |||||||||||||||||    
T  46193584 cctatgctcaaccatgaaatcaacaaggaataaaacatgtaggcacaaggaatctattctattcagcacactaacc 46193659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 11153325 - 11153399
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| || | ||||||| | ||||||||||||||||    
T  11153325 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcactaggaatctattctattcagcacactaac 11153399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 25938028 - 25937962
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||| | |||||||||||| ||||    
T  25938028 aaccatgaaattaacaaggaataaaacatgtgggcacaaggaatctattatattcagcacaccaacc 25937962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 12234685 - 12234621
Alignment:
Q  121 accatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||||||| ||||| |||||||||||||||| ||||  |||||| | ||||||||||||||||    
T  12234685 accatgaaatcaacaaggaataaaacatgtgggcacaagaaatctattctattcagcacactaac 12234621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 51021162 - 51021087
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||| ||| ||||  |||||| | |||||||||||||||||    
T  51021162 cctatgctcaaccatgaaatcaacaaggaataaaacatgcgggcacaataaatctattatattcagcacactaacc 51021087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 18751778 - 18751852
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| ||||| |||||||||| | || ||||||| ||||||||||| ||||||    
T  18751778 cctatgctcaaccatgaaatcaacaaggaatacaacatgtgggcataaggaatctattttattcagcatactaac 18751852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 22434358 - 22434432
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| || | ||||||| | |||||||||| |||||    
T  22434358 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacgaggaatctattatattcagcacgctaac 22434432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 45082560 - 45082652
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatc 164  Q
    |||||||||| || | |||||||| |||||| || ||| |||||| | || ||||||||||||||  | |||| |||||| ||||||||||||    
T  45082560 ctccaaaaacacagagaaatgacaattttagacctaccccctatgctcaatcatgaaataaacaagaactaaagcatgtgagtacaaagaatc 45082652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 12503706 - 12503764
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  12503706 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 12503764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 25447435 - 25447501
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||| || || ||||||||||| | || |||| ||||||| | |||||||||||||||||    
T  25447435 aaccatgaaatcaataaggaataaaacatataggcacaaggaatctattctattcagcacactaacc 25447501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 15523504 - 15523560
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagatt 269  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||    
T  15523504 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggatt 15523560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 18751872 - 18751923
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagt 264  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| |||||    
T  18751872 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagt 18751923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 7 - 271
Target Start/End: Complemental strand, 48248072 - 48247808
Alignment:
Q  7 tcgaagaatatcgtcctgaaactatatgnnnnnnngcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtcca 106  Q
    ||||| || |||||||| ||||||||||       ||||||||||||| |||||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  48248072 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcccatctccctatttccaactccagaaacgcacagaaatgacagttttagtcca 48247973  T
Q  107 accacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttac 206  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  48247972 accacctatgctcaaccatgaaataaacaaagaataaaacatgtgggtacaagaaatctactttattcagcacactaacctaatttccgagacatgttac 48247873  T
Q  207 atacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||    
T  48247872 atacctgaaacatgtcttagaaattagggtttttcttggttagtgtgctgaaaaaagtagattct 48247808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 25637644 - 25637416
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| |||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  25637644 gcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 25637545  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  25637544 aaaacatgtgggtacaaggaatctactttattcagcacgctaacctaatttccgagacacgttacatatctgaaacatgtcttagaaattagggtttttc 25637445  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||||||||||    
T  25637444 ttggtttgtgtgctgaacaaagtagattc 25637416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 26026764 - 26026536
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||  ||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  26026764 gcagttttagttttatctccctatttccaactccaaaaacgcatagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 26026665  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| |||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26026664 aaaacatgtgggtacaaggaatatattttattcaacacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 26026565  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||||||||||    
T  26026564 ttggtttgtgtgctgaacaaagtagattc 26026536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 42 - 271
Target Start/End: Complemental strand, 14311733 - 14311504
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||| | ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14311733 gcagttttagtcttatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccacctatgtttaaccatgaaataaacaaagaat 14311634  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14311633 aaaacatgtgggtacaaggaatatactttattcagcacacgaaccaaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 14311534  T
Q  242 ttggtttgtgtgatgaacaaagtagattct 271  Q
    || |||| |||| |||||||||||||||||    
T  14311533 ttagtttatgtgctgaacaaagtagattct 14311504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 42 - 271
Target Start/End: Original strand, 16081399 - 16081628
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||| ||||||| ||||||||||||| |||| |||||||||||||||||||||||| |||| | ||||||||||||||||||||||    
T  16081399 gcagttttagtcctatctacctatttccaactccaaaaacacacagaaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaaagaat 16081498  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||    
T  16081499 aaaacatgtgggtacaaggaatctactttattcagtacactaacctaatttccaagacatgttacatacctgaaacatgtcttagaaataagagtttttc 16081598  T
Q  242 ttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||||||| |||||||||||||||||    
T  16081599 ttggtttgtgtgctgaacaaagtagattct 16081628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 5745739 - 5745967
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| | |||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  5745739 gcagttttagtcttatctccctatttcctactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 5745838  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||  ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  5745839 aaaatgtgtgggtacaaggaatctactttattcagcacacaaacctaatttccgagacatgttacatacctgaaacatgtcttagaaatttggatttttc 5745938  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||||||||||    
T  5745939 ttggtttgtgtgctgaacaaagtagattc 5745967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 46 - 270
Target Start/End: Complemental strand, 7732929 - 7732706
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    ||||||||||||||||||||||||||||||| ||| ||||| |||| ||| || ||||||||||||||||| | ||||||||||||||||||||||||||    
T  7732929 ttttagtcctatctccctattttcaactccataaatgcacagaaataacaattctagtccaaccacctatgctcaaccatgaaataaacaaagaataaaa 7732830  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttgg 245  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7732829 catgtgg-tacaaggaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttgg 7732731  T
Q  246 tttgtgtgatgaacaaagtagattc 270  Q
    |||||||| | ||||||||||||||    
T  7732730 tttgtgtgttaaacaaagtagattc 7732706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 46 - 270
Target Start/End: Complemental strand, 27245646 - 27245422
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    |||||||| ||||||||||||| |||||||| ||||||||| |||| | |||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  27245646 ttttagtcatatctccctatttccaactccagaaacgcacagaaatcatagttttagtccaaccacctatgctcaaccatgaaataaacaaataataaaa 27245547  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttgg 245  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27245546 catgtgggtacaaggaatctactttattgagcacactaacctaatttccgagacatgttacatacttgaaacatgtcttagaaattagggtttttcttgg 27245447  T
Q  246 tttgtgtgatgaacaaagtagattc 270  Q
    |||||||| ||||||||||||||||    
T  27245446 tttgtgtgctgaacaaagtagattc 27245422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 46 - 270
Target Start/End: Original strand, 35160906 - 35161129
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    ||||||||||||||||||||||||||||||| |  |||||| |||||| ||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  35160906 ttttagtcctatctccctattttcaactccagag-cgcacagaaatgatagttttagtccaaccacctatgcccaaccatgaaataaacaaagaataaaa 35161004  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttgg 245  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  35161005 catgtgggtacaatgaatctactttattcagcacaccaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttag 35161104  T
Q  246 tttgtgtgatgaacaaagtagattc 270  Q
    |||||||| ||||||||||||||||    
T  35161105 tttgtgtgctgaacaaagtagattc 35161129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 42 - 271
Target Start/End: Original strand, 786883 - 787111
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| || ||||||||||||| |||||||||||| | ||||||||||||||||| ||||    
T  786883 gcagttttagtcctatctccctatttccaactccataaacgcacagaagtgacagttttagttcaaccacctatggtcaaccatgaaataaacaaggaat 786982  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||    
T  786983 aaaacatgtgggtacaaaaaatctactttattcagcacgctaacctaatttctaagacatgttacatacctgaaacatgtcttagaaattaggg-ttttc 787081  T
Q  242 ttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||||||| |||||||||||||||||    
T  787082 ttggtttgtgtgttgaacaaagtagattct 787111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 53 - 271
Target Start/End: Original strand, 26048059 - 26048276
Alignment:
Q  53 cctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgg 152  Q
    ||||| ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  26048059 cctatgtccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaataaaacatgtgg 26048158  T
Q  153 gtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgt 252  Q
     |||||  |||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26048159 -tacaagaaatctactttattcagcacactaagctaattttcgagacatgttacaaacctgaaacatgtcttagaaattagggtttttcttggtttgtgt 26048257  T
Q  253 gatgaacaaagtagattct 271  Q
    | | |||||||||||||||    
T  26048258 gctaaacaaagtagattct 26048276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 94 - 270
Target Start/End: Complemental strand, 5334264 - 5334088
Alignment:
Q  94 cagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttc 193  Q
    ||||||||||||||||||||||| | ||||||||||||||||| ||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  5334264 cagttttagtccaaccacctatgctcaaccatgaaataaacaaggaataaagcatgcgggtacaaggaatctactttattcagcacactaacctaatttc 5334165  T
Q  194 cgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
     ||||||||||||||||||||||||| |||||||||||| ||||||| ||   ||||||| ||||||||||||||||    
T  5334164 tgagacatgttacatacctgaaacatatcttagaaattatggttttttttttgttgtgtgctgaacaaagtagattc 5334088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 16081745 - 16081601
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  16081745 gcagttttagtcctatctccctatttccaactccaaaaacgcacaaaaatgacagttttagtccaaccacttatgttcaaccatgaaataaacaaggaat 16081646  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||||||||||||||| |||||||||| ||||    
T  16081645 aaatcatgtgggtacaaagaatctactttgttcagcacacaaacc 16081601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 43 - 204
Target Start/End: Original strand, 11971439 - 11971600
Alignment:
Q  43 cagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaata 142  Q
    ||||||||||||||||||||||||| ||| || | |||| |||| ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||    
T  11971439 cagttttagtcctatctccctatttccaattctagaaacacacataaatgacagttttagtccaaccacctatgctcaacaatgaaataaacaaagaata 11971538  T
Q  143 aaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgtt 204  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||    
T  11971539 aaacatgtgggtacaatgaatctactttattcagcatactaacctaattttcgagacatgtt 11971600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 48247691 - 48247835
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| | | ||||||||||||||| ||||    
T  48247691 gcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccacctatgctcatccatgaaataaacaaggaat 48247790  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||||||||||||||| |||||||||||||||    
T  48247791 aaatcatgtgggtacaaagaatctacttttttcagcacactaacc 48247835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 42 - 233
Target Start/End: Complemental strand, 34595218 - 34595024
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||| ||| | || |||||||||||||| ||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||    
T  34595218 gcagttttagtgctacccccttattttcaactccagaaacgcacagaaatgacagttttagtccaaccacccatgctcaaccatgaaataaacaaggaat 34595119  T
Q  142 aaaacatgtggg-tacaaa--gaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattag 233  Q
    ||| || ||||| |||| |  |||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||||||    
T  34595118 aaagcacgtgggctacacacggaatctactttattcagcacactaacctaatttgtaagacatgttacatacctgaaacatgtcttacaaattag 34595024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 26048393 - 26048249
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  26048393 gcagttttagtcatatctccctatttccaactccaaaaatgcacataaatgacagttttagtccaaccacctatgttcaaccatgaaataaacaaggaat 26048294  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||| ||||||||||||||||||||| || ||||||| ||||    
T  26048293 aaatcatatgggtacaaagaatctactttgtttagcacacaaacc 26048249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 5746081 - 5745941
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    |||||||| ||||||||||||| |||||||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||     
T  5746081 ttttagtcttatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcacctatgcttaaccatgaaataaacaaggaataaat 5745982  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||||| ||||||||||| |||||||||| ||||    
T  5745981 catgtgggtacaaggaatctactttgttcagcacacaaacc 5745941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 7732588 - 7732716
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  7732588 gcagttttagtcctatctccctattttcaactccataaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 7732687  T
Q  142 aaaacatgtgggtacaaagaatctacttt 170  Q
    ||| | ||||||||||| |||||||||||    
T  7732688 aaatcttgtgggtacaaggaatctacttt 7732716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 9181854 - 9181746
Alignment:
Q  43 cagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaata 142  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  9181854 cagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaata 9181755  T
Q  143 aaacatgtg 151  Q
    |||||||||    
T  9181754 aaacatgtg 9181746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 26026418 - 26026562
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||| |||| | ||||||||||||||||| ||||    
T  26026418 gcagttttagtcttatctccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccacatatgctcaaccatgaaataaacaaggaat 26026517  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| |||||||||| || ||||||||||| |||||||||| ||||    
T  26026518 aaatcatgtgggtataaggaatctactttgttcagcacacaaacc 26026562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 27245304 - 27245448
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||| |||||| |||||||||||||||||||||| | ||||||||||||||||| ||||    
T  27245304 gcagttttagtcctatctccttatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 27245403  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| |||||||||| || ||||||||||| |||||||||| ||||    
T  27245404 aaatcatgtgggtataaggaatctactttgttcagcacacaaacc 27245448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 42 - 225
Target Start/End: Complemental strand, 2758144 - 2757961
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||| ||||||| |||| ||||||||  ||||||| ||||||| | |||||||||||||||||||||||| |||| | |||||||||||||||||  |||    
T  2758144 gcaggtttagtcatatccccctatttctaactccagaaacgcatataaatgacagttttagtccaaccacttatgctaaaccatgaaataaacaagaaat 2758045  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtctta 225  Q
    |||  ||||||||||||  |||||||||| ||||  |||||||||||||||| |  ||||||||||||||||||||||||||||    
T  2758044 aaagtatgtgggtacaagaaatctactttgttcaagacactaacctaatttctggaacatgttacatacctgaaacatgtctta 2757961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 175
Target Start/End: Complemental strand, 24929749 - 24929616
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||| | |||||||||||| ||||  |||    
T  24929749 gcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaacgacctatgctcaaccatgaaatagacaagaaat 24929650  T
Q  142 aaaacatgtgggtacaaagaatctactttattca 175  Q
    ||| |||||||||||||  |||||||||||||||    
T  24929649 aaatcatgtgggtacaacaaatctactttattca 24929616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 44 - 166
Target Start/End: Original strand, 15712467 - 15712589
Alignment:
Q  44 agttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataa 143  Q
    |||||||||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  15712467 agttttagtcctatctccctatttccaactctagaaacgcacataaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaacgaataa 15712566  T
Q  144 aacatgtgggtacaaagaatcta 166  Q
    ||||||||||||||| |||||||    
T  15712567 aacatgtgggtacaaggaatcta 15712589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 39388713 - 39388608
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaa-tgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaa 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| | |||||||||||||||||||||    
T  39388713 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaaagaa 39388614  T
Q  141 taaaac 146  Q
    ||||||    
T  39388613 taaaac 39388608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 11973848 - 11973704
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||| |||||| ||||||| ||||| || ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  11973848 gcagttttagttctatcttcctatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 11973749  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| || |||||||||| |||| |||||| |||||||||| ||||    
T  11973748 aaatcacgtgggtacaaggaatatactttgttcagcacacaaacc 11973704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 787226 - 787084
Alignment:
Q  44 agttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataa 143  Q
    |||||||||| ||||| | |||||||||||||| ||||||||| |||||| ||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  787226 agttttagtcttatcttcatattttcaactccagaaacgcacataaatgatagttttagtccaaccacatatgctcaaccatgaaataaacaaggaataa 787127  T
Q  144 aacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    | |||| |||||||||||||||||||| |||| ||||| ||||    
T  787126 atcatgcgggtacaaagaatctactttgttcaacacacaaacc 787084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 44 - 186
Target Start/End: Original strand, 25637300 - 25637442
Alignment:
Q  44 agttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataa 143  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||  ||||||||||||| | ||||||||||||||||| ||||||    
T  25637300 agttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttaagccaaccacctatgctcaaccatgaaataaacaaggaataa 25637399  T
Q  144 aacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    | ||  || |||||| ||||||||||| |||||||||| ||||    
T  25637400 atcacatgagtacaaggaatctactttgttcagcacacaaacc 25637442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 28687941 - 28687802
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    |||||||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||     
T  28687941 ttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaataaat 28687842  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||  | ||||||||||| |||| ||||| ||||    
T  28687841 catgtgggta-tatgaatctactttgttcaacacacaaacc 28687802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 34594683 - 34594825
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||| | ||||||||||||||| | ||||  ||| |||||| |||||||||||||||||||||| | |||||| |||||||||| ||||    
T  34594683 gcagttttagtcctacc-ccctattttcaactcgagaaacaaacataaatgatagttttagtccaaccacctatgctcaaccataaaataaacaaggaat 34594781  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||| || |||||||||| ||||||||||||||||||||||||||    
T  34594782 aaagcaagtgggtacaaggaatctactttattcagcacactaac 34594825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 35161247 - 35161108
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||| |||||| |||||| | || |||||||||| | ||||||||||||||||| ||||    
T  35161247 gcagttttagtcatatctccctatttccaactccataaacgcacataaatgatagttttgggccgaccacctatgctcaaccatgaaataaacaaggaat 35161148  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||| ||| ||||||||| ||||||||||| ||||||||||    
T  35161147 aaatcatatgggtacaaggaatctactttgttcagcacac 35161108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 33881030 - 33880887
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||| ||||||||||||||||| ||||||||| |||||||||||||||||  | | |||||| | ||||||||||||||||| | ||    
T  33881030 gcagttttagtcttatc-ccctattttcaactccagaaacgcacataaatgacagttttagtcatatcccctatgctcaaccatgaaataaacaagggat 33880932  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    | ||||||||||||||| |||||||||||| || |||||||||||    
T  33880931 acaacatgtgggtacaaggaatctactttaatcggcacactaacc 33880887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 32005029 - 32004915
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||||| ||||||||||||||||| |||||||||| |||||||||||||||| ||||||    
T  32005029 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgttcaaccatgaaataaacaaggaataaaacacgtgggtacaaagaatccacttta 32004930  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  32004929 ttcaacacactaacc 32004915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 28687748 - 28687828
Alignment:
Q  190 tttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28687748 tttccgaaacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgttgaacaaagtagattc 28687828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 2659255 - 2659141
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| || |||    
T  2659255 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgttcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacgtta 2659156  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  2659155 ttcaacacactaacc 2659141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 34534190 - 34534092
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  34534190 aaatgacagttttagacctaccacctatgttcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacactaacc 34534092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 19590655 - 19590769
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    |||||||||| || | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  19590655 ctccaaaaacccagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 19590754  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  19590755 ttcaacacactaacc 19590769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 35579331 - 35579188
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| || |||| |||||||||||| |||||||||   |||| |||||||||| || ||| |||||| | |||||| |||||||||| ||||    
T  35579331 gcagttttagtcatacctcc-tattttcaactctaaaaacgcagggaaataacagttttagacctaccccctatgctcaaccataaaataaacaaggaat 35579233  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| |||||| ||||||||| |||||| |||||||||||||||||    
T  35579232 aaagcatgtgagtacaaagagtctactctattcagcacactaacc 35579188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 9181632 - 9181706
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatg 116  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  9181632 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatg 9181706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 19830550 - 19830664
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | | |||||||||||||||  |||||| ||||||||||||||||||| ||||||    
T  19830550 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcagccatgaaataaacaagaaataaagcatgtgggtacaaagaatccacttta 19830649  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  19830650 ttcaacacactaacc 19830664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 29100266 - 29100152
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| |||||||||| || ||| |||||| | ||||||||||||||||| ||||||| |||||||||| |||||||| ||||||    
T  29100266 ctccaaaaacgcagagaaataacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtagaaagaatccacttta 29100167  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  29100166 ttcaacacactaacc 29100152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 35289312 - 35289202
Alignment:
Q  76 aaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattca 175  Q
    ||||||||| | |||| | |||||||| || ||| |||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  35289312 aaaaacgcagagaaataatagttttagacctaccccctatgttcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattca 35289213  T
Q  176 gcacactaacc 186  Q
     ||||||||||    
T  35289212 acacactaacc 35289202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 38858773 - 38858887
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || |||  ||||| | |||||||||||| |||| ||||||| ||||||||||||||||||| ||||||    
T  38858773 ctccaaaaacgcagagaaatgacagttttagacctacccactatgctcaaccatgaaatagacaacgaataaagcatgtgggtacaaagaatccacttta 38858872  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  38858873 ttcaacacactaacc 38858887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 88 - 181
Target Start/End: Original strand, 5334016 - 5334109
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||||||||||||||||||||| ||||||| | ||||||||||||||||| ||||||| ||||| ||||||| ||||||||||| ||||||||||    
T  5334016 aaatgacagttttagtccaactacctatgctcaaccatgaaataaacaaggaataaatcatgtaggtacaaggaatctactttgttcagcacac 5334109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 35579017 - 35579142
Alignment:
Q  61 cctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaag 160  Q
    |||||||||||||||| ||||||| | |||||||| |||||| || | | |||||| | |||||||||||||||||  |||||| ||||||||||||| |    
T  35579017 cctattttcaactccagaaacgcagagaaatgacatttttagacctatcccctatgctcaaccatgaaataaacaagaaataaagcatgtgggtacaagg 35579116  T
Q  161 aatctactttattcagcacactaacc 186  Q
    |||| |||||||||| ||||||||||    
T  35579117 aatccactttattcaacacactaacc 35579142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 4641570 - 4641683
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||| ||| | |||||| |||||||| ||  || |||||| | ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  4641570 ctccaaaaatgcagagaaatgatagttttagacctgccccctatgctcaaccatgaaataaacaaggaaaaaaacatgtgggtacaaagaatcgacttta 4641669  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  4641670 ttcaacacactaac 4641683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 39136807 - 39136928
Alignment:
Q  64 attttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaat 163  Q
    ||||||||||||| ||||  |||||||||||||||||||  | |||  ||||  | ||| ||||||||||||| |||||||||||||||||||||  |||    
T  39136807 attttcaactccagaaactaacaaaaatgacagttttagatctaccctctattatcaacaatgaaataaacaaggaataaaacatgtgggtacaagaaat 39136906  T
Q  164 ctactttattcagcacactaac 185  Q
    ||||||||||| ||||||||||    
T  39136907 ctactttattcggcacactaac 39136928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 9394176 - 9394034
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||| ||||| ||||| ||||||| || | ||||||||||||||| |  ||| |||||| | |||||||||||| | || ||||    
T  9394176 gcagttttagtcctatctcc-tatttccaacttcaaaaacacaaagaaatgacagttttagacttacc-cctatgctcaaccatgaaatagataaggaat 9394079  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||| |||||||||||| ||||| |||||||||| ||||| ||||    
T  9394078 aaaatatgtgggtacaaggaatccactttattcaacacacaaacc 9394034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 14311417 - 14311490
Alignment:
Q  43 cagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatg 116  Q
    |||||||| |||||||||||||||| |||||||| |||| |||| |||||||||||||||||||||||||||||    
T  14311417 cagttttaatcctatctccctatttccaactccataaacacacataaatgacagttttagtccaaccacctatg 14311490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 37786897 - 37787010
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | |||||||||||||  || |||||||||||||| ||||||| |||| ||||||    
T  37786897 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataattaaggaataaaacatgtgagtacaaataatccacttta 37786996  T
Q  172 ttcagcacactaac 185  Q
    |||| || ||||||    
T  37786997 ttcaacatactaac 37787010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 184
Target Start/End: Complemental strand, 4478115 - 4478004
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| |||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||    
T  4478115 ctccaaaaacgcagagaaataacagttttagacctacc-cctatgctcaaccatgaaataaacaaggaataaagcatatgggtacaaagaatccacttta 4478017  T
Q  172 ttcagcacactaa 184  Q
    || | ||||||||    
T  4478016 ttgaacacactaa 4478004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 33880725 - 33880863
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    ||||||||||| | || |||||||| || || ||||||||| ||||    |||||||||| ||| |||||| | ||||||||||||||||| ||||||||    
T  33880725 ttttagtcctacc-ccttattttcaccttcagaaacgcacataaattgttgttttagtcctaccgcctatggtcaaccatgaaataaacaaggaataaaa 33880823  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||| ||||||| |||||||||||| || |||||||||||    
T  33880824 catgt-ggtacaaggaatctactttaatcggcacactaacc 33880863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 34594903 - 34594800
Alignment:
Q  167 ctttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaa-attagggtttttcttggtttgtgtgatgaacaaagta 265  Q
    ||||||||||||||||||||||||||   || |||||||||||||||||||||||||||||| |||||| ||||| ||| || ||||| |||| ||||||    
T  34594903 ctttattcagcacactaacctaatttgtaagccatgttacatacctgaaacatgtcttagaacattaggtttttttttg-ttagtgtgctgaataaagta 34594805  T
Q  266 gattc 270  Q
    |||||    
T  34594804 gattc 34594800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 39387283 - 39387363
Alignment:
Q  190 tttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||  ||||||| |||||||    
T  39387283 tttccgagacatgttacatacctgaaacatgtcttgaaaattatgatttttcttggtttgtgtgccgaacaaactagattc 39387363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 11973660 - 11973730
Alignment:
Q  200 atgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||||||||||||| |||||||||| || ||||||||||||||||| ||||||||||| ||||    
T  11973660 atgttacatacctgaaacatgttttagaaattatgggttttcttggtttgtgtgctgaacaaagtatattc 11973730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 4477880 - 4477955
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  4477880 cctatgctcaaccatgaaatcaacaaggaataaagcatgtgggcacaaagaatctattttattcagcacactaacc 4477955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 5184548 - 5184615
Alignment:
Q  110 acctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagca 178  Q
    ||||||||| ||||||||||||||||| ||||||| ||||| |||||||| ||||||||||||||||||    
T  5184548 acctatgttcaaccatgaaataaacaaggaataaatcatgt-ggtacaaaaaatctactttattcagca 5184615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 9393914 - 9393980
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagca 178  Q
    |||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  9393914 cctatgctcaaccatgaaataaacaaagaataaa-catgtgggtacaaggaatctactatattcagca 9393980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 32004793 - 32004868
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||||||||| |||||| | |||||| ||||||||||    
T  32004793 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggtacaaaaaatctattatattcatcacactaacc 32004868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 19830786 - 19830712
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  19830786 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaatgaatctattctattcagcacactaac 19830712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 23953144 - 23953031
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| |||||||||| |  ||| |||||| | | ||||||||||||||  ||||||| |||||||||||  |||||| ||||||    
T  23953144 ctccaaaaacgcagagaaataacagttttagacatacc-cctatgctcagccatgaaataaacagggaataaagcatgtgggtacggagaatccacttta 23953046  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  23953045 ttcaacacactaacc 23953031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 2659016 - 2659092
Alignment:
Q  109 cacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||||| | ||||||||||| ||||| |||||||||||| ||| ||||| |||||| |||||||| |||||||||    
T  2659016 cacctatgctcaaccatgaaatcaacaaggaataaaacatgcgggcacaaaaaatctattttattcatcacactaac 2659092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 34533954 - 34534045
Alignment:
Q  94 cagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||| || ||| |||||| | |||||| |||| ||||| |||||||||||||||| |||||||||||| | |||||| ||||||||||    
T  34533954 cagttttagacctacc-cctatgctcaaccataaaatcaacaaggaataaaacatgtgggcacaaagaatctattctattcatcacactaacc 34534045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 19590891 - 19590816
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||||||| | |||||| ||||||||||    
T  19590891 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaatgaatctattctattcatcacactaacc 19590816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 23952919 - 23952984
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||||  ||||| |||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  23952919 aaccatgaaaacaacaaggaataaaacatgtgggcacaaggaatctattatattcagcacactaac 23952984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 28687693 - 28687750
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttt 99  Q
    |||||| ||||||||||| ||||||| |||||||| ||||||||| ||||||||||||    
T  28687693 gcagttctagtcctatcttcctatttccaactccagaaacgcacataaatgacagttt 28687750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 29100038 - 29100103
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||||| ||||| |||||||||||| ||  |||||||||||| | ||||||||||||||||    
T  29100038 aaccatgaaatcaacaaggaataaaacatgcggacacaaagaatctattatattcagcacactaac 29100103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 38859007 - 38858936
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacact 182  Q
    |||||| | ||||||||||| ||||| |||| || |||||||| |||||||||||| | |||||||||||||    
T  38859007 cctatgctcaaccatgaaatcaacaaggaattaagcatgtgggcacaaagaatctattctattcagcacact 38858936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 5184498 - 5184546
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgac 94  Q
    |||||||| ||||||||||||| |||||||||||| ||||| |||||||    
T  5184498 ttttagtcttatctccctatttccaactccaaaaatgcacagaaatgac 5184546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 37787149 - 37787058
Alignment:
Q  94 cagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||| || ||| |||||| | ||||||||||| |||||  ||||||||||||||| |||| ||||||| | |||||| || |||||||    
T  37787149 cagttttagacctacc-cctatgctcaaccatgaaatcaacaagcaataaaacatgtgggcacaatgaatctattctattcaacatactaacc 37787058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 4641801 - 4641738
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacacta 183  Q
    ||||||||||| || || |||||||||||||||| ||||  |||||| | ||||||||||||||    
T  4641801 aaccatgaaatcaataaggaataaaacatgtgggcacaagaaatctattctattcagcacacta 4641738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 181
Target Start/End: Original strand, 9181713 - 9181748
Alignment:
Q  146 catgtgggtacaaagaatctactttattcagcacac 181  Q
    ||||||||||||||||||||||||| ||||||||||    
T  9181713 catgtgggtacaaagaatctactttgttcagcacac 9181748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 9394004 - 9394060
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||| |||||||||||||||||||  |||||||||||| |||| ||||| |||||    
T  9394004 tgaaacatatcttagaaattagggtttt--ttggtttgtgtgttgaataaagtggattc 9394060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 19830695 - 19830637
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  19830695 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 19830637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 29100121 - 29100179
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  29100121 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 29100179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 34534061 - 34534119
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  34534061 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 34534119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 32427463 - 32427406
Alignment:
Q  44 agttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttag 102  Q
    ||||||||||||  |||| |||||||||||| ||||||||| | |||||||||||||||    
T  32427463 agttttagtccttcctcc-tattttcaactctaaaaacgcagagaaatgacagttttag 32427406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 35289082 - 35289155
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||| |  || |||||||| | |||||| ||||||||||    
T  35289082 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgag--cacagaatctattctattcatcacactaacc 35289155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 7 - 270
Target Start/End: Complemental strand, 25472493 - 25472230
Alignment:
Q  7 tcgaagaatatcgtcctgaaactatatgnnnnnnngcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtcca 106  Q
    ||||| || |||||||| ||||||||||       |||||||||||||||||||||||||| || ||||| ||||||||| |||||||||||||||||||    
T  25472493 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccagctccagaaacgcacagaaatgacagttttagtcca 25472394  T
Q  107 accacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttac 206  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  25472393 accacctatgctcaaccatgaaataaacaaagaataaaacatgtgggtacaatgaatctactttattcatcacactaacctaatttccaagacatgttac 25472294  T
Q  207 atacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  25472293 atacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgctgaaaaaagtagattc 25472230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 29891526 - 29891298
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| |||||| |||||||||||||||||||||  | ||||||||||||||||||||||    
T  29891526 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctatactcaaccatgaaataaacaaagaat 29891427  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  29891426 aaaacatgtgggtacaaggaatctactttattcagcacactaacctaatttccgagacatgttacatgcctgaaacatgtcttagaaattaggatttttc 29891327  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||||||||||    
T  29891326 ttggtttgtgtgctgaacaaagtagattc 29891298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 5114568 - 5114796
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| |||| |||| |||||||||||||||| |||||||||||| | ||||||||||||||||||||||    
T  5114568 gcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagttcaaccacctatgctcaaccatgaaataaacaaagaat 5114667  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5114668 aaaacaggtgggtacaaggaatctactttattcagcacactaacctaatttccgagatatgttacatacctgaaacatgtcttagaaattagggtttttc 5114767  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||| || ||||||||||||||||    
T  5114768 ttggtttgtatgctgaacaaagtagattc 5114796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 31573825 - 31574053
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  31573825 gcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 31573924  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||| ||||||    
T  31573925 aaaacatgtgggtacaaggaatatactttattcaacacactaacctaatttctgagacatgttacatacctgaaacatgttttggaaattaggttttttc 31574024  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||   ||||||||||||||    
T  31574025 ttggtttgtgtgcgtaacaaagtagattc 31574053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 42 - 253
Target Start/End: Complemental strand, 28636642 - 28636432
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | |||||||||||||| |||||||    
T  28636642 gcagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaa-aaagaat 28636544  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    |||||||||||||| || ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28636543 aaaacatgtgggtataaggaatctactttattcagtacactaacctcatttccgagacatgttacatacctgaaacatgtcttagaaattagagtttttc 28636444  T
Q  242 ttggtttgtgtg 253  Q
    ||||||||||||    
T  28636443 ttggtttgtgtg 28636432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 44 - 270
Target Start/End: Complemental strand, 30251135 - 30250909
Alignment:
Q  44 agttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataa 143  Q
    |||||||||| ||||||||||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||  | ||||||||||||||||||||||||    
T  30251135 agttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagatttagtccaaccacctatcctcaaccatgaaataaacaaagaataa 30251036  T
Q  144 aacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttctt 243  Q
    |||||||||||||||| |||||||||||||||  ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30251035 aacatgtgggtacaaaaaatctactttattcaatacattaacctaattttcgagacatgttacatacctgaaacatgtcttagaaattagagtttttctt 30250936  T
Q  244 ggtttgtgtgatgaacaaagtagattc 270  Q
    ||| | |||| ||||||||||||||||    
T  30250935 ggtctatgtgctgaacaaagtagattc 30250909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 92 - 269
Target Start/End: Original strand, 31073290 - 31073469
Alignment:
Q  92 gacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatcta--ctttattcagcacactaacctaa 189  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||| ||||| |||||||  |||||||||||||||||||||||    
T  31073290 gacagttttagtccaaccacctatactcaaccatgaaataaacaaagaataaaacatgtggctacaaggaatctatactttattcagcacactaacctaa 31073389  T
Q  190 tttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagatt 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  31073390 tttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttatgtgctgaacaaagtagatt 31073469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 42 - 193
Target Start/End: Complemental strand, 24640631 - 24640480
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||| ||||||||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  24640631 gcagttttagtcttatctccctatttccaactccgaaaacgcacagaaatgacagttctagtccaaccacctatgctcaaccatgaaataaacaaagaat 24640532  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttc 193  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  24640531 aaaatatgtgggtacaaggaatctactttattcagcacactaacctaatttc 24640480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 31073588 - 31073450
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  31073588 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaatgaat 31073489  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcaca 180  Q
    ||| |||||||||||||  |||||||||| |||||||||    
T  31073488 aaatcatgtgggtacaagaaatctactttgttcagcaca 31073450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 54 - 186
Target Start/End: Original strand, 29891192 - 29891324
Alignment:
Q  54 ctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtggg 153  Q
    |||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||||    
T  29891192 ctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaataaatcatgtggg 29891291  T
Q  154 tacaaagaatctactttattcagcacactaacc 186  Q
    ||||| ||||||||||| |||||||||| ||||    
T  29891292 tacaaggaatctactttgttcagcacacaaacc 29891324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 170
Target Start/End: Complemental strand, 31574171 - 31574043
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| | ||||||||||||||||| ||||    
T  31574171 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacaattttagtccaaccacctatgctcaaccatgaaataaacaaggaat 31574072  T
Q  142 aaaacatgtgggtacaaagaatctacttt 170  Q
    ||| ||||||||||||| |||||||||||    
T  31574071 aaatcatgtgggtacaaggaatctacttt 31574043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 30250791 - 30250929
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||| ||||||||  ||||||||||| ||||| || ||||||||| |||||||||||||||||||| ||| |||| | || |||||||||||||| ||||    
T  30250791 gcagctttagtccattctccctatttccaactacagaaacgcacagaaatgacagttttagtccaatcacttatgctcaatcatgaaataaacaatgaat 30250890  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcaca 180  Q
    ||| ||||||||||||| ||||||||||| |||||||||    
T  30250891 aaatcatgtgggtacaaggaatctactttgttcagcaca 30250929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 42 - 175
Target Start/End: Original strand, 11523786 - 11523917
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||| |||  |||||||||||||| ||||||||||||||  ||||| |||||||||||| |||||| |||||||||||||| || ||||    
T  11523786 gcagttttagtcctacctca-tattttcaactccataaacgcacaaaaattgcagttctagtccaaccac-tatgttcaaccatgaaataaataaggaat 11523883  T
Q  142 aaaacatgtgggtacaaagaatctactttattca 175  Q
    ||||||||||||||||| ||||||| ||||||||    
T  11523884 aaaacatgtgggtacaaggaatctattttattca 11523917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 42 - 155
Target Start/End: Original strand, 25468951 - 25469064
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||||||||||| || |||| ||||||||| |||||||||||||| |||||||||||||| | |||||||||||||||||  |||    
T  25468951 gcagttttagtcctatctccctattttaaattccagaaacgcacagaaatgacagttttattccaaccacctatgctcaaccatgaaataaacaagaaat 25469050  T
Q  142 aaaacatgtgggta 155  Q
    ||| ||||||||||    
T  25469051 aaatcatgtgggta 25469064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 184
Target Start/End: Complemental strand, 1149842 - 1149734
Alignment:
Q  76 aaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattca 175  Q
    ||||||||| | ||||||||||||||| || ||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  1149842 aaaaacgcagagaaatgacagttttagacctaccccctatgttcaaccatgaaataaacaaagaataaagcatgtgggtacaaagaatccactttattca 1149743  T
Q  176 gcacactaa 184  Q
     ||||||||    
T  1149742 acacactaa 1149734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 72 - 184
Target Start/End: Original strand, 28472766 - 28472878
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  28472766 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaaagaatccacttta 28472865  T
Q  172 ttcagcacactaa 184  Q
    |||| ||||||||    
T  28472866 ttcaacacactaa 28472878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 35163631 - 35163488
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||| |||| ||||||||||||||||||| || | ||||||||||||||| || ||| ||||||   ||||||||||||||||| ||||    
T  35163631 gcagttttagtcctacctcc-tattttcaactccaaaaacacagagaaatgacagttttaggcctaccccctatgcccaaccatgaaataaacaaggaat 35163533  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||||||||||||||  |||| |||||||||| ||||| ||||    
T  35163532 aaaacatgtgggtacaagaaatccactttattcaacacacgaacc 35163488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 10900345 - 10900231
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  10900345 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 10900246  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  10900245 ttcaacacactaacc 10900231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 20741230 - 20741343
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| ||| ||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  20741230 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgcttagccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 20741329  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  20741330 ttcaacacactaac 20741343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 11276709 - 11276834
Alignment:
Q  61 cctattttcaa-ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaa 159  Q
    ||||||||||| ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||| ||||| |||||||||||||||| |||||    
T  11276709 cctattttcaaactccaaaaacgcagagaaatgacagttttaggcctacc-cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaa 11276807  T
Q  160 gaatctactttattcagcacactaacc 186  Q
    ||||||| | |||||||||||||||||    
T  11276808 gaatctattctattcagcacactaacc 11276834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 15828056 - 15827943
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| |||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  15828056 ctccaaaaacgcagagaaataacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 15827957  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  15827956 ttcaacacactaac 15827943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 11276997 - 11276884
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||| | | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| |||||| |||||||||||| ||||||    
T  11276997 ctccaaaaacgaagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgagtacaaagaatccacttta 11276898  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  11276897 ttcaacacactaac 11276884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 2322618 - 2322520
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||||||| ||  || |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  2322618 aaatgacagttttagaccttccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacactaacc 2322520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 12935556 - 12935458
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||||||| || ||| |||||||| ||||||||||||||||| ||||||| || |||||||||||||||  |||||||||| ||||||||||    
T  12935556 aaatgacagttttagacctaccccctatgttcaaccatgaaataaacaacgaataaatcacgtgggtacaaagaattcactttattcaacacactaacc 12935458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 72 - 184
Target Start/End: Original strand, 23074118 - 23074230
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| |||||||||| || |||  ||||| | ||||||||||||||||| ||||||| || |||||||||||||||| ||||||    
T  23074118 ctccaaaaacgcagagaaataacagttttagacctaccttctatgctcaaccatgaaataaacaaggaataaagcacgtgggtacaaagaatccacttta 23074217  T
Q  172 ttcagcacactaa 184  Q
    |||| ||||||||    
T  23074218 ttcaacacactaa 23074230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 11445133 - 11445231
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||||||| || ||| |||||| | | ||||||||||||||| ||||||| || |||||||||||||||| |||||||||| ||||||||||    
T  11445133 aaatgacagttttagacctaccccctatgctcatccatgaaataaacaaggaataaagcacgtgggtacaaagaatccactttattcaacacactaacc 11445231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 18257267 - 18257381
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || |||  ||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | ||||    
T  18257267 ctccaaaaacgcagagaaatgacagttttagacctaccctctatgctcaaccatgaaattaacaaggaataaagcatgtgggtacaatgaatccatttta 18257366  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  18257367 ttcaacacactaacc 18257381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 10900058 - 10900182
Alignment:
Q  61 cctattttcaa-ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaa 159  Q
    ||||||||||| ||||| ||||||| | ||||||||||||||| || ||| |||||| | ||||||||||| ||||| |||||||||||||||| ||||     
T  10900058 cctattttcaaactccagaaacgcagagaaatgacagttttagacctacc-cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaag 10900156  T
Q  160 gaatctactttattcagcacactaac 185  Q
     |||||| | ||||||||||||||||    
T  10900157 aaatctattctattcagcacactaac 10900182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 5120915 - 5120848
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaacc 109  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||    
T  5120915 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttaatccaacc 5120848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 18505295 - 18505220
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  18505295 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacactaacc 18505220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 35163350 - 35163441
Alignment:
Q  94 cagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||| || ||| |||||||  ||||||||||||||||| |||| || ||||||||||||| ||||||||| ||||||||||||||||    
T  35163350 cagttttagacctaccccctatgtccaaccatgaaataaacaaggaatgaagcatgtgggtacaaggaatctactatattcagcacactaac 35163441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 5114851 - 5114778
Alignment:
Q  105 caaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagca 178  Q
    |||||||||||| | ||||||||||||||||| ||||||| ||||||||||||| ||||||||||| |||||||    
T  5114851 caaccacctatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaggaatctactttgttcagca 5114778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 31470731 - 31470617
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||||||| ||||||  | ||| | |||| | || |||||||||||||| ||||||| || |||| ||||||||||| ||| ||    
T  31470731 ctccaaaaacgcagagaaatgacaattttagatctaccccttatgctcaatcatgaaataaacaaggaataaagcacgtggatacaaagaatccactgta 31470632  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  31470631 ttcaacacactaacc 31470617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 29859955 - 29860027
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaa 144  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| |||||||    
T  29859955 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaa 29860027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 32836442 - 32836299
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||| || | ||||||||||| || ||||| | | |||| |||||||||| || ||| | |||| | |||||||||||||||||  |||    
T  32836442 gcagttttagtcctaccttc-tattttcaacttcagaaacgaagagaaataacagttttagacctaccccttatgctcaaccatgaaataaacaagaaat 32836344  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||| |||| ||||  |||| | |||||||| ||||||||||    
T  32836343 aaagcatttgggaacaagaaatccattttattcaacacactaacc 32836299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 20741467 - 20741392
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||| ||||||| ||||| |||||||||||||||| |||| ||||||| | |||||||||||||||||    
T  20741467 cctatgctcaactatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctattcagcacactaacc 20741392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 22219719 - 22219644
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||  |||||||||||||||| |||| ||||||| | |||||||||||||||||    
T  22219719 cctatgctcaaccatgaaatcaacattgaataaaacatgtgggcacaaggaatctattctattcagcacactaacc 22219644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 15827821 - 15827894
Alignment:
Q  113 tatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| ||||||||||| ||| | |||||||||||||||| |||| ||||||| | |||||| ||||||||||    
T  15827821 tatgttcaaccatgaaatcaaccaggaataaaacatgtgggcacaatgaatctattatattcatcacactaacc 15827894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 11445341 - 11445278
Alignment:
Q  123 catgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||||| ||||| |||||||||||||||| |||| ||||||| | | |||||||||||||||    
T  11445341 catgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctgttcagcacactaacc 11445278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 18257503 - 18257428
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| |||||  ||||||||||||||  |||| ||||||| | |||||||||||||||||    
T  18257503 cctatgctcaaccatgaaatcaacaagcaataaaacatgtggacacaatgaatctattctattcagcacactaacc 18257428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 18505098 - 18505173
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| | || ||||||| | |||||||||||| ||||    
T  18505098 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggaataaggaatctattctattcagcacaccaacc 18505173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 4811623 - 4811549
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||||| | | |||||| |||||||||    
T  4811623 cctatgctcaaccatgaaatcaacaatgaataaaacatgtgggcacaaggaatccattctattcaacacactaac 4811549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 12935336 - 12935410
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| ||||  |||||| | ||||||||| ||||||    
T  12935336 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaacaaatctattctattcagcatactaac 12935410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 2319850 - 2319905
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatcta 166  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| |||||||    
T  2319850 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatcta 2319905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 2322488 - 2322547
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| | |||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  2322488 tgaaacatattttagaaattagggttttttttggttagtgtgttgaataaagtggattct 2322547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 20741376 - 20741317
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| || ||| ||||| |||| ||||| ||||||    
T  20741376 tgaaacatatcttagaaattagggtttttttttgttagtgtgttgaataaagtggattct 20741317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 31470494 - 31470569
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||  |||||||||||||||| |||| ||||||| | ||||| | |||||||||    
T  31470494 cctatgctcaaccatgaaatcaacatggaataaaacatgtgggcacaaggaatctattctattcggtacactaacc 31470569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 1149607 - 1149681
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | |||||| |||| ||||| |||||||||||||||| ||||||||| || | |||||| |||| ||||    
T  1149607 cctatgctcaaccattaaatcaacaaggaataaaacatgtgggcacaaagaatttattctattcatcacaataac 1149681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 22534170 - 22534211
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgca 84  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  22534170 gcagttttagtcctacctcc-tattttcaactccaaaaacgca 22534211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 28472995 - 28472929
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||| ||||| |||||||||||| ||| |||| |||| || | |||||||||||| ||||    
T  28472995 aaccatgaaatcaacaaggaataaaacatgcgggcacaaggaatttattctattcagcacaccaacc 28472929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 32836189 - 32836255
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| |||||||||| |||| || ||| ||| ||||| |||||||||  ||||||||||||||||    
T  32836189 aaccataaaataaacaaggaatcaagcatatggatacaaggaatctactcgattcagcacactaacc 32836255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 28636391 - 28636435
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcaca 86  Q
    |||||||||||| ||||||||||||| |||||||| ||| |||||    
T  28636391 gcagttttagtcatatctccctatttccaactccataaatgcaca 28636435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 33095815 - 33095858
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcaca 86  Q
    ||||||||||||||| |||| |||||||| |||||||||||||||    
T  33095815 gcagttttagtcctacctcc-tattttcacctccaaaaacgcaca 33095858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 16 - 270
Target Start/End: Original strand, 28254500 - 28254754
Alignment:
Q  16 atcgtcctgaaactatatgnnnnnnngcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctat 115  Q
    |||||||| ||||||||||       |||||||||||||||||||||||||| |||||||| ||||||| | |||||||| |||||||||||||||||||    
T  28254500 atcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacatttttagtccaaccacctat 28254599  T
Q  116 gtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaa 215  Q
    | | ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28254600 gctcaaccatgaaataaacaaagaataaaacatgtgggtacaaggaatctactttattaagcacactaacctaatttccgagacatgttacatacctgaa 28254699  T
Q  216 acatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  28254700 acatgtcttagaaattagggtttttcttggtttgtgtgctgaacgaagtagattc 28254754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 16 - 270
Target Start/End: Complemental strand, 9797198 - 9796944
Alignment:
Q  16 atcgtcctgaaactatatgnnnnnnngcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctat 115  Q
    |||||||| ||||||||||       ||||||||||| |||||| ||||||| |||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  9797198 atcgtccttaaactatatgtttttttgcagttttagttctatctacctatttccaactccataaacgcacagaaatgacagttttagtctaaccacctat 9797099  T
Q  116 gtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaa 215  Q
    | | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9797098 gctcaaccatgaaataaacaaagaataaaacatgtgggtacaaggaatctactttattcagcacactaacctaatttccgagatatgttacatacctgaa 9796999  T
Q  216 acatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9796998 acatgttttagaaattagggtttttcttggtttgtgtgctgaacaaagtagattc 9796944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 35694313 - 35694088
Alignment:
Q  45 gttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaa 144  Q
    ||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  35694313 gttttagtcttatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgttcaaccatgaaataaacaaggaataaa 35694214  T
Q  145 acatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttg 244  Q
    | |||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  35694213 atatgtgggtacaaggaatctactttattcatcacactaacctaatttctgagacatgttacatacccgaaacatgtcatagaaattagggtttttcttg 35694114  T
Q  245 gtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||||||||||||||    
T  35694113 gtttgtgtgatgaacaaagtagattc 35694088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 7 - 270
Target Start/End: Original strand, 18049656 - 18049919
Alignment:
Q  7 tcgaagaatatcgtcctgaaactatatgnnnnnnngcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtcca 106  Q
    ||||| || |||||||| ||||||||||       |||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| ||||    
T  18049656 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatcca 18049755  T
Q  107 accacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttac 206  Q
    |||||||||| | |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  18049756 accacctatgctcaaccatgaaataaacaaagattaaaacatgtgggtacaaggaatctactttattcagcacactaacctaatttctgagacatgttac 18049855  T
Q  207 atacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||   ||||||||||||||    
T  18049856 atacctgaaacatgttttagaaattaaggtttttcttggtttgtgtgcgtaacaaagtagattc 18049919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 34799180 - 34799411
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| |||||||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  34799180 gcagttttagtcctatctccctatttccaactccataaacgcacataaatgacaattttagtccaaccacctatgctcaaccatgaaataaacaaagaat 34799279  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaac---atgtcttagaaattagggttt 238  Q
    ||| |||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||  |||    
T  34799280 aaagcatgtgggtataaggaatctactttattcaacacactaacctaatttccgagacatgttacatacctgaaacaatatgtcttagaaattagaattt 34799379  T
Q  239 ttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||| ||||||||||||||||    
T  34799380 ttcttggtttgtgtgctgaacaaagtagattc 34799411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 45 - 270
Target Start/End: Original strand, 5730920 - 5731140
Alignment:
Q  45 gttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaa 144  Q
    |||||||||||| ||||||||||| ||||||| ||||| ||| ||||||||||||||||| || |||||||||| |||||||||||||||||||||||||    
T  5730920 gttttagtcctacctccctatttttaactccagaaacgtacagaaatgacagttttagtc-aatcacctatgttcaaccatgaaataaacaaagaataaa 5731018  T
Q  145 acatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttg 244  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||||||||||    
T  5731019 acatgtgggtacaaggaatctactttattcagcacactaacctaatttccgagacatgttacata----aaacatgtcttagaatttagggtttttcttg 5731114  T
Q  245 gtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||| ||||||||||||||||    
T  5731115 gtttgtgtgctgaacaaagtagattc 5731140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 46 - 270
Target Start/End: Original strand, 35426917 - 35427140
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    ||||| |||||||||||||||| |||||||| ||||||||| ||||||||||||||||| |||||| |||| | |||||||||||||||||  |||||||    
T  35426917 ttttactcctatctccctatttccaactccataaacgcacagaaatgacagttttagtctaaccacatatgctcaaccatgaaataaacaagaaataaaa 35427016  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttgg 245  Q
    |||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35427017 catgtgggtataagga-tctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttgg 35427115  T
Q  246 tttgtgtgatgaacaaagtagattc 270  Q
    ||||| || ||||||||||| ||||    
T  35427116 tttgtctgctgaacaaagtatattc 35427140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 46 - 269
Target Start/End: Original strand, 42035876 - 42036098
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| |||||||     
T  42035876 ttttagtcctatctccctatttctaactccataaacgcacaaaaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaaggaataaag 42035975  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttgg 245  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||| || |    
T  42035976 catgtgggtacaaggaatctactttattcagcacactaacctaatttctgagacatattacatacctgaaacatgtcttagaaattaggtttttttttag 42036075  T
Q  246 tttgtgtgatgaacaaagtagatt 269  Q
     ||||||| |||||||||||||||    
T  42036076 -ttgtgtgctgaacaaagtagatt 42036098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 42 - 271
Target Start/End: Complemental strand, 15256274 - 15256050
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||| ||||| ||||||||||||| |||||||| ||||||||| |||||||| |||||||||||||||||      ||||||||||||||||||||||    
T  15256274 gcagttctagtcatatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctc-----aaccatgaaataaacaaagaat 15256180  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||    
T  15256179 aaaacatgtgggtacaaggaatctactttattcagcatactaacctaattttttagacatgttacatacctgaaacatgtcttagaaattaggatttttc 15256080  T
Q  242 ttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||||||| |||||||||||||||||    
T  15256079 ttggtttgtgtgttgaacaaagtagattct 15256050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 7 - 241
Target Start/End: Complemental strand, 18428242 - 18428008
Alignment:
Q  7 tcgaagaatatcgtcctgaaactatatgnnnnnnngcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtcca 106  Q
    ||||| || |||||||| ||||||||||       ||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  18428242 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttactcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtcca 18428143  T
Q  107 accacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttac 206  Q
    |||| ||||| | |||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||   ||||||||||||    
T  18428142 accatctatgctcaaccatgaaataaacaaagaataaaacatgtgggtataaggaatctattttattcagcacactaacctaattcttgagacatgttac 18428043  T
Q  207 atacctgaaacatgtcttagaaattagggtttttc 241  Q
    |||||||||||||||||||||||||||| ||||||    
T  18428042 atacctgaaacatgtcttagaaattaggatttttc 18428008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 88 - 269
Target Start/End: Original strand, 41260407 - 41260588
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacct 187  Q
    |||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||  ||||||||||||||| |||||| ||||    
T  41260407 aaatgacacttttagtccaaccacctatgctcaaccatgaaataaacaaagaataaaacatgcgggtacaagaaatctactttattcaacacactgacct 41260506  T
Q  188 aatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagatt 269  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41260507 aatttccgagatatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgctgaacaaagtagatt 41260588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 46 - 246
Target Start/End: Original strand, 2208819 - 2209019
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    |||||||| ||||||||||||||||| |||| ||||| ||| |||| | |||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  2208819 ttttagtcatatctccctattttcaattccagaaacgtacagaaataatagttttagtccaaccacctatgctcaaccatgaaataaacaaagaataaaa 2208918  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttgg 245  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||| ||||    
T  2208919 catgtgggtacaagaaatttactttattcagcacactaacctaatttccgaaacatgttacatacctgaaacatatcttagaaattagggtattttttgg 2209018  T
Q  246 t 246  Q
    |    
T  2209019 t 2209019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 82 - 270
Target Start/End: Original strand, 7910757 - 7910944
Alignment:
Q  82 gcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||||| ||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||||| |||||||||| |||||||||||||||| ||||||||    
T  7910757 gcacagaaatgacagttttagtcaaaccacatatgttcaaccatgaaataaacaaggaataaagcatgtgggtataaagaatctactttatccagcacac 7910856  T
Q  182 taacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||| |||| ||||||| | ||||||||||||||    
T  7910857 taacctaatttctgagacatgttacatacctgaaacatgtcttagaaatta-gtttttttttggattgtgtgctaaacaaagtagattc 7910944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 42 - 227
Target Start/End: Original strand, 16578208 - 16578393
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatga-cagttttagtccaaccacctatgtttaaccatgaaataaacaaagaa 140  Q
    |||||||| ||||||||||||||||| |||||||| ||||||| |||||  | ||||||||||||||||| ||||| | ||||||||||||||||| | |    
T  16578208 gcagttttggtcctatctccctatttccaactccagaaacgcaaaaaaaaaaacagttttagtccaaccatctatgctcaaccatgaaataaacaaggta 16578307  T
Q  141 taaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttaga 227  Q
    |||| ||||||||||||| |||||||| || || |||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  16578308 taaatcatgtgggtacaaggaatctac-ttgttaagcaaactaacctaatttccgagacatgttacataactgaaacatgtcttaga 16578393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 42 - 184
Target Start/End: Complemental strand, 16578542 - 16578400
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||| | | ||||||||| ||||||||||||||||||||||||||||| | |||| |||||||||||||||||    
T  16578542 gcagttttagtcctatctccctatttccaacactagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccgtgaaataaacaaagaat 16578443  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaa 184  Q
    ||||||||||||||||| ||||||||||||||||| |||||||    
T  16578442 aaaacatgtgggtacaaggaatctactttattcagtacactaa 16578400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 5731258 - 5731114
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  5731258 gcagttttagttctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 5731159  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||| ||||||||| ||||||||||| |||||||||| ||||    
T  5731158 aaatcatatgggtacaaggaatctactttgttcagcacacaaacc 5731114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 28254872 - 28254728
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | |||||||||| |||||||||||    
T  28254872 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaagaaacaaagaat 28254773  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||  |||||||||| ||||    
T  28254772 aaatcatgtgggtacaaggaatctacttcgttcagcacacaaacc 28254728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 41260707 - 41260563
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| | ||||||||||||||||| ||||    
T  41260707 gcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacttatgctcaaccatgaaataaacaaggaat 41260608  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| |||||||||||||  |||||||||| |||||||||| ||||    
T  41260607 aaatcatgtgggtacaagaaatctactttgttcagcacacaaacc 41260563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 42 - 188
Target Start/End: Complemental strand, 599944 - 599798
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||||| |||||| ||| |||| ||||||| | |||||||||||||||||||||||| |||| | |||||||||||||||||| |||    
T  599944 gcagttttagtcttatctctctatttccaattccagaaacgcatagaaatgacagttttagtccaaccacttatgctaaaccatgaaataaacaaaaaat 599845  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaaccta 188  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  599844 aaaacatgtgggtacaaggaatctactttattcagcacactaaccta 599798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 7911062 - 7910923
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||| | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  7911062 gcagttttagtcatatccctctattttcaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 7910963  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||||||||||||||||| ||||||||||| || |||||||    
T  7910962 aaaacatgtgggtacaaggaatctactttgtttagcacac 7910923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 43 - 186
Target Start/End: Original strand, 35693971 - 35694114
Alignment:
Q  43 cagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaata 142  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||| || | ||||||||||||||||| |||||    
T  35693971 cagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctttgctcaaccatgaaataaacaaggaata 35694070  T
Q  143 aaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    || ||||||||||||| ||||||||||| |||| ||||| ||||    
T  35694071 aatcatgtgggtacaaggaatctactttgttcatcacacaaacc 35694114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 9796826 - 9796970
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | |||||| |||||||||| ||||    
T  9796826 gcagttttagtcatatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccataaaataaacaaggaat 9796925  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||| ||| ||||||||||| |||||||||| ||||    
T  9796926 aaatcatgtgggtgcaaggaatctactttgttcagcacacaaacc 9796970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 178
Target Start/End: Complemental strand, 35427258 - 35427122
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  35427258 gcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 35427159  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagca 178  Q
    ||| ||||||||||||| |||| |||||| |||||||    
T  35427158 aaatcatgtgggtacaaggaatatactttgttcagca 35427122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 34799529 - 34799385
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||| |||||| ||||||||| |||||||||||| | ||||||||||||||||| || |    
T  34799529 gcagttttagtcctatcttcctatttccaactccataaacgcacataaatgatagttttagttcaaccacctatgctcaaccatgaaataaacaaggact 34799430  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||| |||||||||| ||||    
T  34799429 aaatcatgtgggtacaaggaatctactttgttcagcacacaaacc 34799385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 18050034 - 18049909
Alignment:
Q  45 gttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaa 144  Q
    |||||| ||||||||||||||||||||||||| ||||||||| |||| ||||||||| |||||||||||||| | ||||||||||||||||| |||||||    
T  18050034 gttttaatcctatctccctattttcaactccagaaacgcacagaaataacagttttactccaaccacctatgctcaaccatgaaataaacaaggaataaa 18049935  T
Q  145 acatgtgggtacaaagaatctacttt 170  Q
     ||||||||||||| |||||||||||    
T  18049934 tcatgtgggtacaaggaatctacttt 18049909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 599632 - 599776
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||| |   ||||||||||||||||| ||||    
T  599632 gcagttttagtcatatctccctatttccaactccagaaacgcacacaaatgacagttttagtccagccacctacgcgcaaccatgaaataaacaaggaat 599731  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| |||||| |||| |||||||||| ||||    
T  599732 aaatcatgtgggtacaaggaatcttctttgttcagcacacaaacc 599776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 6115554 - 6115412
Alignment:
Q  44 agttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataa 143  Q
    ||||||||| |||||||| |||||||||||| | ||||||||| |||||||||||||||||||||||| ||||   ||||||||||||||||| ||||||    
T  6115554 agttttagttctatctccttattttcaactcaagaaacgcacagaaatgacagttttagtccaaccacttatgcccaaccatgaaataaacaacgaataa 6115455  T
Q  144 aacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    | |||||| ||| || ||||||||||| |||||||||| ||||    
T  6115454 atcatgtgagtaaaatgaatctactttgttcagcacacaaacc 6115412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 6115351 - 6115438
Alignment:
Q  182 taacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  6115351 taacctaatttccgagacatgttacatacctgaaacatgtcttagaaatta-ggttttttttggtttgtgtgctgaacaaagtagattc 6115438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 13224770 - 13224884
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  13224770 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 13224869  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  13224870 ttcaacacactaacc 13224884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 19176705 - 19176591
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || |||||||||| | ||||||||||||||||||||||||| || | |||||||||||||| ||||||    
T  19176705 ctccaaaaacgcagacaaatgacagttttagacctaccacctatgctcaaccatgaaataaacaaagaataaagcacgcgggtacaaagaatccacttta 19176606  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  19176605 ttcaacacactaacc 19176591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 33328288 - 33328401
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  33328288 ctccaaaaacgcaaagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 33328387  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  33328388 ttcaacacactaac 33328401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 59 - 159
Target Start/End: Original strand, 35163815 - 35163915
Alignment:
Q  59 tccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaa 158  Q
    ||||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||| ||||||||    
T  35163815 tccctatttccaactcgagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaataaatcatgcgggtacaa 35163914  T
Q  159 a 159  Q
    |    
T  35163915 a 35163915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 42036217 - 42036078
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||   | ||||| |||||||| ||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||    
T  42036217 gcagttttagtcgtattctcatatttccaactccagaaatgcacaaaaatgacagttttagtccaaccacctatactcaaccatgaaataaacaaggaat 42036118  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    |||  ||||| ||||||  |||||||||| ||||||||||    
T  42036117 aaagtatgtgagtacaagaaatctactttgttcagcacac 42036078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 12571994 - 12572108
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | |||||||||||||| || ||||||| ||||||||||||||||||| ||||||    
T  12571994 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaaaaaggaataaagcatgtgggtacaaagaatccacttta 12572093  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  12572094 ttcaacacactaacc 12572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 11656590 - 11656698
Alignment:
Q  76 aaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattca 175  Q
    ||||||||| | ||||| ||||||||| || ||| | |||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  11656590 aaaaacgcagagaaatggcagttttagacctaccccttatgttcaaccatgaaataaacaaagaataaagcatgtgggtacaaagaatccactttattca 11656689  T
Q  176 gcacactaa 184  Q
     ||||||||    
T  11656690 acacactaa 11656698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 9178047 - 9177937
Alignment:
Q  76 aaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattca 175  Q
    ||||||||| | |||||||| |||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  9178047 aaaaacgcagagaaatgacaattttagacctacctcctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattca 9177948  T
Q  176 gcacactaacc 186  Q
     ||||||||||    
T  9177947 acacactaacc 9177937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 28877024 - 28877145
Alignment:
Q  63 tattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaa 162  Q
    |||||||||||| | ||||||| | ||| || || ||||| || ||| |||||||| ||||||||||||||||| ||||||||||||||||||||| |||    
T  28877024 tattttcaactcaagaaacgcagagaaacgatagctttagacctaccccctatgttcaaccatgaaataaacaaggaataaaacatgtgggtacaaggaa 28877123  T
Q  163 tctactttattcagcacactaa 184  Q
    || |||||||||| ||||||||    
T  28877124 tcaactttattcaacacactaa 28877145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 31133350 - 31133463
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||| | | ||||||||||||||| || ||| | |||| | ||||||||||||||||| |||||||||||||||||||||| |||| ||||||    
T  31133350 ctccaaaaacgtagagaaatgacagttttagacctacctcttatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaaaaaatccacttta 31133449  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  31133450 ttcaacacactaac 31133463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 9930072 - 9929958
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    |||||||| |||| | |||||| |||||||| || ||| |||||| | ||||||||||||||||| ||||||| |||||||||||||| |||| ||||||    
T  9930072 ctccaaaagcgcagagaaatgatagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaatcatgtgggtacaaaaaatccacttta 9929973  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  9929972 ttcaacacactaacc 9929958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 42 - 136
Target Start/End: Original strand, 26252909 - 26253003
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaa 136  Q
    |||||||||||||||||||||||||| |||||||| |||||| || ||||||||| ||||||||||||||||||  | ||| |||||||||||||    
T  26252909 gcagttttagtcctatctccctatttccaactccagaaacgctcagaaatgacagatttagtccaaccacctatactcaacaatgaaataaacaa 26253003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 44831660 - 44831546
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    |||||||||| || | ||||||||||||||| || ||| |||||| | |||||||||||| |||| ||||||| ||||||||||||||||||| ||||||    
T  44831660 ctccaaaaacacagagaaatgacagttttagacctaccccctatgctcaaccatgaaatagacaacgaataaagcatgtgggtacaaagaatccacttta 44831561  T
Q  172 ttcagcacactaacc 186  Q
    |||| |||| |||||    
T  44831560 ttcaacacattaacc 44831546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 28877332 - 28877192
Alignment:
Q  45 gttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaa 144  Q
    |||||||||||| || | |||||| ||||||| ||||| | | |||||||| |||||| || ||| |||||| | ||| ||||||||||||| |||||||    
T  28877332 gttttagtcctaccttc-tatttttaactccagaaacgtatataaatgacaattttagacctacctcctatgctcaactatgaaataaacaaggaataaa 28877234  T
Q  145 acatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||||| ||||||||||| |||||||||| |||| |||||    
T  28877233 acatgtggatacaaagaatccactttattcaacacattaacc 28877192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 4630207 - 4630087
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaac-------aaagaataaaacatgtgggtacaaagaatc 164  Q
    ||||||||||||| ||||||||||||||||| || ||| |||||| | |||||||||||||||       || ||||||| |||||||||||||||||||    
T  4630207 ctccaaaaacgcagaaaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaggaataaagcatgtgggtacaaagaatc 4630108  T
Q  165 tactttattcagcacactaac 185  Q
     |||||||||| |||||||||    
T  4630107 cactttattcaacacactaac 4630087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 33743334 - 33743220
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| |||||||||| || ||  |||||||| |||||||||||||| || ||||||| ||||||||| ||||||||  ||||||    
T  33743334 ctccaaaaacgcagagaaataacagttttagacctactccctatgttcaaccatgaaataaataaggaataaagcatgtgggtgcaaagaattcacttta 33743235  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  33743234 ttcaacacactaacc 33743220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 41681263 - 41681377
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||  |  ||| |||||  | |||||||||||||||||  |||||| ||||||||||||||||||| ||||||    
T  41681263 ctccaaaaacgcagagaaatgacagttttaaacataccccctatactcaaccatgaaataaacaagaaataaagcatgtgggtacaaagaatccacttta 41681362  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  41681363 ttcaacacactaacc 41681377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 186
Target Start/End: Original strand, 18805266 - 18805406
Alignment:
Q  45 gttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaa 144  Q
    |||||||||||| |||| ||| |||||||||| |||| || | ||||||||||||||| |  ||| ||||||   ||||||||||||||||| |||||||    
T  18805266 gttttagtcctacctcc-tatcttcaactccagaaacacagagaaatgacagttttagacttaccccctatgcacaaccatgaaataaacaaggaataaa 18805364  T
Q  145 acatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
     ||| ||| || ||||||| |||||||||||  |||||||||    
T  18805365 gcatctggatataaagaatatactttattcaaaacactaacc 18805406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 9177811 - 9177885
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| |||||||||||||||||||||| |||| ||||||| | ||||||||| ||||||    
T  9177811 cctatgctcaaccatgaaatcaacaaagaataaaacatgtgggcacaaggaatctattctattcagcatactaac 9177885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 15256011 - 15256077
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||||||||||||||  |||||| ||||||||||||||||||||||||| |||| ||||| ||||    
T  15256011 aaccatgaaataaacaagtaataaatcatgtgggtacaaagaatctactttgttcaacacacaaacc 15256077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 41681500 - 41681426
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  41681500 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctattcagcacactaac 41681426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 599797 - 599750
Alignment:
Q  223 ttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  599797 ttagaaattagggtttttcttggtttgtgtgctgaacaaagaagattc 599750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 11656823 - 11656748
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| ||||||||| || | |||||| ||||||||||    
T  11656823 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaagaatttattctattcatcacactaacc 11656748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 13225005 - 13224930
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| ||||  |||||| | |||||||||||||||||    
T  13225005 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaagtaatctattctattcagcacactaacc 13224930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 33743084 - 33743174
Alignment:
Q  94 cagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||| || ||| |||||| | ||||||||||| ||||| |||||||||||||||| |||| |||| || | ||||||||||||||||    
T  33743084 cagttttagacctacc-cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatttattctattcagcacactaac 33743174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 4629974 - 4630040
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||| ||||| |||||||||||||||  |||| ||||||| | |||||||||||||||||    
T  4629974 aaccatgaaatcaacaaggaataaaacatgtggacacaaggaatctattatattcagcacactaacc 4630040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 9929097 - 9929163
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||| ||||| ||||||||||||| || |||| ||||||| ||||||||||||| |||||    
T  9929097 aaccatgaaatcaacaaggaataaaacatgtaggcacaaggaatctattttattcagcacattaacc 9929163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 12572208 - 12572155
Alignment:
Q  132 aacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||| ||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  12572208 aacaatgaataaaacatgtgggtacaaggaatctattctattcagcacactaac 12572155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 19176478 - 19176543
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||||| || || |||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  19176478 aaccatgaaatcaataaggaataaaacatgtgggcacaaggaatctattctattcagcacactaac 19176543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 270
Target Start/End: Complemental strand, 26254736 - 26254644
Alignment:
Q  178 acactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||| ||||| ||||||||||| |||||| |||| |  ||||||   ||||| || ||||||||| ||||||||||| ||||    
T  26254736 acactaacctaattttcgagatatgttacatacatgaaacctgtcgtgaaaattataatttttttttgtttgtgtgctgaacaaagtaaattc 26254644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 44831426 - 44831497
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacact 182  Q
    |||||| | ||||||||||| ||||| |||| || |||||||| |||||||||||| | |||||||||||||    
T  44831426 cctatgctcaaccatgaaatcaacaaggaattaagcatgtgggcacaaagaatctattctattcagcacact 44831497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 26254612 - 26254665
Alignment:
Q  128 aataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||||||||| ||||||| ||||||||||||| |||| |||||| ||||||||||    
T  26254612 aataaacaatgaataaatcatgtgggtacaatgaatttactttgttcagcacac 26254665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 31133577 - 31133512
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||||| |||||  |||||||||| |||| |||| ||||||| | ||||||||||||||||    
T  31133577 aaccatgaaatcaacaagaaataaaacatatgggcacaaggaatctattatattcagcacactaac 31133512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 13224915 - 13224857
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  13224915 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 13224857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 33328434 - 33328375
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| || ||| ||||| |||| ||||| ||||||    
T  33328434 tgaaacatatcttagaaattagggtttttttttgttagtgtgttgaataaagtggattct 33328375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 76
Target Start/End: Original strand, 15255953 - 15255987
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactcca 76  Q
    |||||||||||||||||||||||||| ||||||||    
T  15255953 gcagttttagtcctatctccctatttccaactcca 15255987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 9177908 - 9177964
Alignment:
Q  214 aaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  9177908 aaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 9177964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 41681407 - 41681350
Alignment:
Q  214 aaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||| | |||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  41681407 aaacatatgttagaaattagggttttttttggttagtgtgttgaataaagtggattct 41681350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 33743189 - 33743240
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagt 264  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| |||||    
T  33743189 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagt 33743240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 98)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 9992255 - 9992483
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| |||| |||| |||||||||||||||||| |||||||||| | ||||||||||||||||||||||    
T  9992255 gcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccgaccacctatgctcaaccatgaaataaacaaagaat 9992354  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  9992355 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttttgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 9992454  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||| || ||||||||||||||||    
T  9992455 ttggtttgtttgttgaacaaagtagattc 9992483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 43 - 270
Target Start/End: Complemental strand, 10278995 - 10278767
Alignment:
Q  43 cagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaata 142  Q
    ||||||||||||||||||| ||| | |||||||| |||| |||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  10278995 cagttttagtcctatctccatatatccaactccagaaacacacagaaatgacagttttagtccaaccacatatgttcaaccatgaaataaacaaagaata 10278896  T
Q  143 aaacatgtgggtacaaagaatctacttt-attcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10278895 aaatatgtgggtacaaggaatctacttttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 10278796  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||||||||||    
T  10278795 ttggtttgtgtgctgaacaaagtagattc 10278767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 46 - 270
Target Start/End: Complemental strand, 30787214 - 30786990
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    |||||||||||| |||||||||||||||||| ||| ||| | ||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||    
T  30787214 ttttagtcctatttccctattttcaactccataaatgcagagaaatgacagttttagtccaactacctatgctcaaccatgaaataaacaaagaataaaa 30787115  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttgg 245  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30787114 catgtggatacaaggaatctactttattcagcacactaacctaatttccgagacatgttacatatctgaaacatgtcttagaaattagggtttttcttgg 30787015  T
Q  246 tttgtgtgatgaacaaagtagattc 270  Q
    |||||||| ||||||||||||||||    
T  30787014 tttgtgtgctgaacaaagtagattc 30786990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 34555826 - 34555599
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  34555826 gcagttttagtcatatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaat 34555727  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34555726 aaaacatgtgg-tacaagaaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattaggatttttc 34555628  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    || ||||||||| ||||||||||||||||    
T  34555627 ttagtttgtgtgctgaacaaagtagattc 34555599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 44 - 269
Target Start/End: Original strand, 17641467 - 17641691
Alignment:
Q  44 agttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataa 143  Q
    ||||||||| |||||||||||||| |||||||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||    
T  17641467 agttttagttctatctccctatttccaactccagaaacgcacataaatgacagttttagttcaaccacctatgttcaaccatgaaataaacaaggaataa 17641566  T
Q  144 aacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttctt 243  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  17641567 aacatgcgggtacaaggaatctactttattcagcacactaacctaatttctgagacatgttacatatctgaaacatgtcttagcaatta-ggtttttctt 17641665  T
Q  244 ggtttgtgtgatgaacaaagtagatt 269  Q
    ||||||||||||||||||||||||||    
T  17641666 ggtttgtgtgatgaacaaagtagatt 17641691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 42 - 247
Target Start/End: Original strand, 21938663 - 21938868
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||    
T  21938663 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaaaaat 21938762  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21938763 aaaacatatgggtacaaggaaactactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 21938862  T
Q  242 ttggtt 247  Q
    ||||||    
T  21938863 ttggtt 21938868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 44582504 - 44582275
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaa-cgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaa 140  Q
    |||||||||||| | |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  44582504 gcagttttagtcttgtctccctattttcagctccaaaaaacgcacagaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaagaa 44582405  T
Q  141 taaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggttttt 240  Q
    |||||||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  44582404 taaaacatgtggctacaaagaatctactttatttagcagactaacataatttccgagacatgttacatacctgaaacatgtcttagaaattagagttttt 44582305  T
Q  241 cttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||| |||||| ||||||||||||||||    
T  44582304 cttggtctgtgtgctgaacaaagtagattc 44582275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 7 - 270
Target Start/End: Original strand, 37505133 - 37505396
Alignment:
Q  7 tcgaagaatatcgtcctgaaactatatgnnnnnnngcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtcca 106  Q
    ||||| || |||||||| ||||||||||       |||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||    
T  37505133 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatttccctattttcaactccaaaaatgaacagaaatgacagttttagtcca 37505232  T
Q  107 accacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttac 206  Q
     | | ||||| | |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  37505233 gctatctatgctcaaccatgaaataaacaaagaataaaacatgtgagtacaaaaaatctactttattcaacacactaacctaatttccgagacatgttac 37505332  T
Q  207 atacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
     ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  37505333 gtacctgaaacacgtcttagaaattagggattttcttggtttgtgtgctgaacaaagtagattc 37505396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 42 - 271
Target Start/End: Complemental strand, 50305228 - 50304999
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||||||||||||||||||||| |||| |||| |||||||||||||| |||||| || |||| | ||||||||||||||||| ||||    
T  50305228 gcagttttagtcatatctccctattttcaactccataaacacacataaatgacagttttaatccaactacttatgctcaaccatgaaataaacaaggaat 50305129  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  50305128 aaaatatgtggatacaaggaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggttattc 50305029  T
Q  242 ttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||||||  |||||||||||||||||    
T  50305028 ttggtttgtgtactgaacaaagtagattct 50304999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 16299128 - 16298900
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||| |||||||| ||||||| |||||||||||  | ||||||||||||||||||||||    
T  16299128 gcagttttagtcctatctccatatttccaactccagaaacgcacagaaatgacaattttagttcaaccacctatactcaaccatgaaataaacaaagaat 16299029  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  16299028 aaaacatatgggtacaaggaatctactttattcaacacactaacctaatttccgagacattttacatgcctgaaacatgtcttagaaattatggtttttc 16298929  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||| ||||||||||||||||    
T  16298928 ttggtttgtgtgctgaacaaagtagattc 16298900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 44954326 - 44954554
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||||| || ||| |||||||| ||||||||| |||||||||||||||||||||||| |||| | ||||||||| ||||||| ||||    
T  44954326 gcagttttagtcgtatctctctgtttccaactccagaaacgcacagaaatgacagttttagtccaaccacatatgctcaaccatgaagtaaacaaggaat 44954425  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  44954426 aaaacatgtgggtacaaggaatctactttattcagcacactaacctaatttccgagacatgttacgcacctgaaacatgtcttagaaattagggtttttc 44954525  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||| |||| |||||||| |||||||    
T  44954526 ttggtttatgtgctgaacaaaatagattc 44954554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 88 - 271
Target Start/End: Complemental strand, 29439331 - 29439148
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacct 187  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  29439331 aaatgacagttttagtccaaccacctatgttcaaccatgaaataaataaataataaagcatgtgggtataaagaaactactttattcagcacactaacct 29439232  T
Q  188 aatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  29439231 aatttccgagacatgttacatacctgaaacatgtcttagaaattatggtatttcttggtttgtgtgatgaacaaagtagattct 29439148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 8229740 - 8229938
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||| || |||| | |||||||||||||||||  |||    
T  8229740 gcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaactacatatgctcaaccatgaaataaacaagaaat 8229839  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggttttt 240  Q
    ||| ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||    
T  8229840 aaagcatgtgggtacaatgaatctactttattcaacacactaacctaatttctgagacatgttacatacctcaaacatgtcttagaaattaaggttttt 8229938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 29021309 - 29021104
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| || | ||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| | ||||||||||||||||||||||    
T  29021309 gcagttttagtcttacc-ccctattttcaactccagaaacgcacataaatgacagtttttgtccaaccacctatgctcaaccatgaaataaacaaagaat 29021211  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaac--------ctaatttccgagacatgttacatacctgaaacatgtcttagaaattag 233  Q
    ||||||||||||||||| ||||||||||||||||||||||||||        ||||||||  |||||||||||||| |||||||||||||||||||||||    
T  29021210 aaaacatgtgggtacaaggaatctactttattcagcacactaacaaaaaaaactaatttctaagacatgttacatatctgaaacatgtcttagaaattag 29021111  T
Q  234 ggttttt 240  Q
    | |||||    
T  29021110 gattttt 29021104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 37505514 - 37505370
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  37505514 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 37505415  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||| |||||||||| ||||    
T  37505414 aaatcatgtgggtacaaggaatctactttgttcagcacacaaacc 37505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 152 - 270
Target Start/End: Complemental strand, 1744663 - 1744545
Alignment:
Q  152 ggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtg 251  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1744663 ggtacaaggaatctactttattcagcacaataacctaatttccgagacatgctacatacctgaaacatgtcttagaaattagggtttttcttggtttgtg 1744564  T
Q  252 tgatgaacaaagtagattc 270  Q
    || ||||||||||||||||    
T  1744563 tgctgaacaaagtagattc 1744545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 30786872 - 30787016
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||| |||||||||||||||| |||| | ||||||||||||||||| ||||    
T  30786872 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacggttttagtccaaccacttatgctcaaccatgaaataaacaaggaat 30786971  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||| |||||||||| ||||    
T  30786972 aaatcatgtgggtacaaggaatctactttgttcagcacacaaacc 30787016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 43 - 186
Target Start/End: Original strand, 4080122 - 4080265
Alignment:
Q  43 cagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaata 142  Q
    ||||||||||| ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||    
T  4080122 cagttttagtcatatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccatctatgttcaaccatgaaataaacaaggaata 4080221  T
Q  143 aaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    || ||||||||||||| |||| |||||| |||||||||| ||||    
T  4080222 aatcatgtgggtacaaggaatttactttgttcagcacacaaacc 4080265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 8230087 - 8229952
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||| |||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  8230087 gcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgttcaatcatgaaataaacaaagaat 8229988  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagc 177  Q
    ||| ||||||||||||| ||||||||||| ||||||    
T  8229987 aaagcatgtgggtacaaggaatctactttgttcagc 8229952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 141 - 270
Target Start/End: Complemental strand, 4080369 - 4080239
Alignment:
Q  141 taaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattag-ggtttt 239  Q
    |||| |||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||    
T  4080369 taaatcatgtgggtacaagaaatctactttattcagcacactaacctaatttctgagacatgttacatacctgaaacatgtcttagaaattagagttttt 4080270  T
Q  240 tcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||||| ||||||||||| ||||    
T  4080269 tcttggtttgtgtgctgaacaaagtaaattc 4080239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 1744427 - 1744571
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||  | |||||| |||||||||| ||||    
T  1744427 gcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatactcaaccataaaataaacaaggaat 1744526  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||| |||||||||| ||||    
T  1744527 aaatcatgtgggtacaaggaatctactttgttcagcacacaaacc 1744571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 29439031 - 29439175
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||| |||||||||| || |||||| ||||||||| |||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  29439031 gcagttttagtcctatctctctattttcaattcaaaaaacacacaaaaataacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 29439130  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||| ||||||||||||||||||||| |||| ||||| ||||    
T  29439131 aaatcatatgggtacaaagaatctactttgttcatcacacaaacc 29439175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 43 - 181
Target Start/End: Original strand, 34555482 - 34555620
Alignment:
Q  43 cagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaata 142  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||| ||||||| |||| ||||||||||||||||||| |||||    
T  34555482 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagttcaaccacatatgcttaaccatgaaataaacaaggaata 34555581  T
Q  143 aaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    || ||||||| ||||| ||||||||||| ||||||||||    
T  34555582 aatcatgtggatacaaggaatctactttgttcagcacac 34555620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 1837605 - 1837750
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaat-aaacaaagaa 140  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||| |||||| |||    
T  1837605 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaaacaaggaa 1837704  T
Q  141 taaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||| || |||||||||| ||||||||||| |||| ||||| ||||    
T  1837705 taaatcaagtgggtacaaggaatctactttgttcatcacacaaacc 1837750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 50926332 - 50926540
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||  |  |||||||||||||||| |||| |||| |||||  |||||||||||||||||||||| |  ||||||||||||||||  |||    
T  50926332 gcagttttagtccttacctcctattttcaactccagaaacacacataaatggtagttttagtccaaccacctatgctctaccatgaaataaacaagaaat 50926431  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaa----------cctaatttccgagacatgttacatacctgaaacatgtcttagaaatt 231  Q
    ||| ||||||||||||| ||||||| | |||||||||||||||          |||||||||  ||||||||||||||||||| ||||||||||||||||    
T  50926432 aaagcatgtgggtacaaggaatctattatattcagcacactaacaaaaaaaaccctaatttctaagacatgttacatacctgatacatgtcttagaaatt 50926531  T
Q  232 agggttttt 240  Q
    |||||||||    
T  50926532 agggttttt 50926540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 443997 - 443858
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| ||| |||| |||||| || ||||||||||||||||||||||||||||| | ||  ||||||||||||||||||    
T  443997 gcagttttagtcctatctccctatttccaattccataaacgcgcataaatgacagttttagtccaaccacctatgctcaattatgaaataaacaaagaat 443898  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||| ||||||||||||| ||||||||||| |||| |||||    
T  443897 aaatcatgtgggtacaaggaatctactttgttcaacacac 443858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 37421262 - 37421388
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||    
T  37421262 gcagttttagtcatatttccctatttccaactccaaaaacgcacagaaatgacagttttagtctaaccacctatgctcaaccatgaaataaacaaggaat 37421361  T
Q  142 aaaacatgtgggtacaaagaatctact 168  Q
    ||| ||||||||||||| |||||||||    
T  37421362 aaatcatgtgggtacaaggaatctact 37421388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 10278649 - 10278793
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||| |||||||| |||||||||||||||||||| | ||| ||||||||| ||| ||||    
T  10278649 gcagttttagtcctatctccccatttgcaactccagaaacgcacataaatgacaattttagtccaaccacctatgctcaactatgaaataagcaaggaat 10278748  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||| ||||||||| ||||||||||| |||||||||| ||||    
T  10278749 aaatcatatgggtacaaggaatctactttgttcagcacacaaacc 10278793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 16298782 - 16298926
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||| ||||||| ||||||   ||||||| | |||||| |||||||||||||||||||||| | ||||||||||||||||| ||||    
T  16298782 gcagttttagtcctatctacctatttccaactctggaaacgcaaataaatgatagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 16298881  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| ||||||||||| |||||||||| ||||    
T  16298882 aaatcatgtgggtacaaggaatctactttgttcagcacacaaacc 16298926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 17641810 - 17641666
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||||||||||| | || |||||||||| ||| ||||    
T  17641810 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccacctatgctcaatcatgaaataatcaaggaat 17641711  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| |||||||||||||  |||||||||| |||| ||||| ||||    
T  17641710 aaaccatgtgggtacaagaaatctactttgttcatcacacaaacc 17641666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 170
Target Start/End: Complemental strand, 52335956 - 52335828
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||| |||| | ||||||||||||||||| ||||    
T  52335956 gcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaaggaat 52335857  T
Q  142 aaaacatgtgggtacaaagaatctacttt 170  Q
    ||| ||||| |||||||| ||||||||||    
T  52335856 aaatcatgtaggtacaaaaaatctacttt 52335828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 44582157 - 44582296
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||  | ||| |||||||| ||||||||| |||||||| |||||||||||||||||||| | ||||||||||| ||||| ||||    
T  44582157 gcagttttagtcctatctctttgtttccaactccataaacgcacataaatgacaattttagtccaaccacctatgctcaaccatgaaatgaacaaggaat 44582256  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||| ||||||||||||| ||||||||||| ||||||||||    
T  44582257 aaatcatgtgggtacaaggaatctactttgttcagcacac 44582296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 44954672 - 44954534
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||| ||||||||||| | ||||||||| |||||||  |||    
T  44954672 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtcaaaccacctatgctcaaccatgaagtaaacaataaat 44954573  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcaca 180  Q
    ||| || |||||||||| ||||||| ||| |||||||||    
T  44954572 aaatcacgtgggtacaaggaatctattttgttcagcaca 44954534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 42 - 175
Target Start/End: Complemental strand, 9992601 - 9992468
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||| ||||||||||||||||||||||||||||| ||||||  | |||||||||||||| |||||||| ||||| | ||||||||||||||||| ||||    
T  9992601 gcagtattagtcctatctccctattttcaactccagaaacgcgtagaaatgacagttttaatccaaccatctatgctcaaccatgaaataaacaaggaat 9992502  T
Q  142 aaaacatgtgggtacaaagaatctactttattca 175  Q
    ||| ||||||||||||| ||||||||||| ||||    
T  9992501 aaatcatgtgggtacaaggaatctactttgttca 9992468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 9833597 - 9833454
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||| |||| ||| ||||||||| |||||||||| | ||| ||||||||||||| ||||    
T  9833597 gcagttttagtcctacc-ccctattttcaactccagaaacgcacagaaataacatttttagtcctaccacctatgctcaactatgaaataaacaaggaat 9833499  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||||||||| |||| ||||||||||  ||||||||||    
T  9833498 aaaacatgtgggtacaaggaatatactttattcgtcacactaacc 9833454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 23340283 - 23340427
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||| ||||| |||||||| |||||| || |||||||||||||||| ||||||| |||| | ||||||||||||||||||||||    
T  23340283 gcagttttagtcatatctccttatttccaactccagaaacgctcagaaatgacagttttagttcaaccacatatgctcaaccatgaaataaacaaagaat 23340382  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||| ||||| ||||||||||| ||||| |||| ||||    
T  23340383 aaatcatgtggatacaaggaatctactttgttcagaacacaaacc 23340427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 50304882 - 50305026
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||||||||||||  ||||||| |||| |||||||||| || ||||| |||||||||||||| | ||||||||||||||||| ||||    
T  50304882 gcagttttagtcatatctccctatttcaaactccataaacacacaaaaatggcaattttaatccaaccacctatgctcaaccatgaaataaacaaggaat 50304981  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| |||||| |||||||||||||||||| ||||| |||| ||||    
T  50304982 aaatcatgtgagtacaaagaatctactttgttcagtacacaaacc 50305026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 1837818 - 1837724
Alignment:
Q  175 agcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1837818 agcacactaacctaatttccgaaatatgttagatacctgaaacatgtcttagaaattaggg-ttttcttggtttgtgtgatgaacaaagtagattc 1837724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 50926687 - 50926544
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||  | ||||||||||||||||| |||| |||| |||||  |||||||||||||||||||||| |  ||||| ||||||||||  |||    
T  50926687 gcagttttagtccttaccccctattttcaactccataaacacacataaatggtagttttagtccaaccacctatgctctaccataaaataaacaagaaat 50926588  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||| ||||||||||||| ||||||| | ||||||||||||||||    
T  50926587 aaagcatgtgggtacaaggaatctattatattcagcacactaac 50926544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 4636105 - 4636215
Alignment:
Q  75 caaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattc 174  Q
    |||||||||| | ||||||||||||||| || ||| |||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  4636105 caaaaacgcagagaaatgacagttttagacctaccccctatgttcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattc 4636204  T
Q  175 agcacactaac 185  Q
    | |||||||||    
T  4636205 aacacactaac 4636215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 21856458 - 21856344
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  21856458 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaaagaatccacttta 21856359  T
Q  172 ttcagcacactaacc 186  Q
    |||| || |||||||    
T  21856358 ttcaacagactaacc 21856344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 5962993 - 5962880
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  5962993 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaacgaataaaacatgtgggtacaaagcatccacttta 5962894  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  5962893 ttcaacacactaac 5962880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 33144334 - 33144221
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || |||  ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  33144334 ctccaaaaacgcagagaaatgacagttttagacctaccctctatgcttaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 33144235  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  33144234 ttcaacacactaac 33144221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 17088255 - 17088394
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    ||||||||||| |||| ||||||||||| || ||| ||| | ||||| ||||||||| || ||| |||||| | ||||||||||||||||| ||||||||    
T  17088255 ttttagtcctacctcc-tattttcaacttcagaaatgcagagaaatggcagttttagacctacctcctatgctcaaccatgaaataaacaaggaataaaa 17088353  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||| ||||||| ||||||||| |||||||||||||||||    
T  17088354 catgtaggtacaaggaatctactctattcagcacactaacc 17088394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 44291756 - 44291609
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgac----agttttagtccaaccacctatgtttaaccatgaaataaacaaa 137  Q
    ||||||||||||||| | ||||||||||||||||| |||| || | ||||| |    ||||||||||  |||||||||||| |||||||||||||||||     
T  44291756 gcagttttagtcctacc-ccctattttcaactccagaaacacatagaaatggcagttagttttagtcgtaccacctatgttcaaccatgaaataaacaag 44291658  T
Q  138 gaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||| |||||||||| || |||||||||||||||||||||| ||||    
T  44291657 gaataaagcatgtgggtaaaatgaatctactttattcagcacaccaacc 44291609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 17433346 - 17433460
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || | | |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  17433346 ctccaaaaacgcagagaaatgacagttttagacctatcccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 17433445  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  17433446 ttcaacacactaacc 17433460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 39154149 - 39154263
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || | | |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  39154149 ctccaaaaacgcatagaaatgacagttttagacccatcccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 39154248  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  39154249 ttcaacacactaacc 39154263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 5540233 - 5540121
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  5540233 ctccaaaaacgcagagaaatgacagttttagacctacc-cctatgctcaaccatgaaataaacaaggaataaaatatgtgggtacaaagaatccacttta 5540135  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  5540134 ttcaacacactaac 5540121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 15173226 - 15173339
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  15173226 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccaagaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 15173325  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  15173326 ttcaacacactaac 15173339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 85 - 175
Target Start/End: Complemental strand, 23526943 - 23526852
Alignment:
Q  85 caaaaatgacagtttt-agtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattca 175  Q
    |||||||||||||||| ||| |||||| ||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  23526943 caaaaatgacagtttttagtacaaccatctatgttcaaccatgaaataaacaaggaataaaacatgtgggtacaaggaatctactttattca 23526852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 29307083 - 29307196
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| | ||||    
T  29307083 ctccaaaaacgcagagaaatgacagttttagacctacc-cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccatttta 29307181  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  29307182 ttcaacacactaacc 29307196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 29869750 - 29869864
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||| || |||||||||||| ||||||    
T  29869750 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaatcatatgagtacaaagaatccacttta 29869849  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  29869850 ttcaacacactaacc 29869864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 8678957 - 8678844
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||| ||| | ||||||||||||||| || ||| |||||| | |||||| |||||||||| ||||||| ||||||||||||||||||| ||||||    
T  8678957 ctccaaaaatgcagagaaatgacagttttagacctaccccctatgctcaaccataaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 8678858  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  8678857 ttcaacacactaac 8678844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 26859475 - 26859362
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| | |||||||| || ||| |||||||| ||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||    
T  26859475 ctccaaaaacgcagagaaataatagttttagacctacctcctatgttcaaccatgaaataaacaaggaataaagcatgtggatacaaagaatccacttta 26859376  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  26859375 ttcaacacactaac 26859362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 50970693 - 50970580
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| |||||||||||||| ||||||| |||| ||||||    
T  50970693 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaaacatgtgagtacaaataatccacttta 50970594  T
Q  172 ttcagcacactaac 185  Q
    |||| || ||||||    
T  50970593 ttcaacatactaac 50970580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 270
Target Start/End: Original strand, 443787 - 443879
Alignment:
Q  178 acactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||| | |||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||    
T  443787 acactaccttaattttcgaaacatattacatacctgaaacatgtcttaaaaattagggtttttcttagtttgtgtgttgaacaaagtagattc 443879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 39485165 - 39485308
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||| ||||||||||| || |||| || | | ||||||||||||| || ||| | |||| | ||||||||||||||||| ||||    
T  39485165 gcagttttagtcctatctcc-tattttcaacttcagaaacacagagagatgacagttttagacctaccccatatgctcaaccatgaaataaacaaggaat 39485263  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||||||| | ||| | |||||||||| ||||| ||||    
T  39485264 aaaacatgtgggtacgaggaacccactttattcaacacacaaacc 39485308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 15646610 - 15646493
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacct---atgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctact 168  Q
    ||||||||||||| | ||||||||||||||| || ||| | |   ||||| ||||||||||||||||||||||||| ||||||||||| ||||||| |||    
T  15646610 ctccaaaaacgcagagaaatgacagttttagacctaccccattttatgttcaaccatgaaataaacaaagaataaagcatgtgggtacgaagaatccact 15646511  T
Q  169 ttattcagcacactaacc 186  Q
    ||||||| ||||||||||    
T  15646510 ttattcaacacactaacc 15646493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 45048255 - 45048397
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||| |||  |||||||||||||| ||||||| | |||| |||||||||| |  |||  ||||| | ||||||||||||||||| ||||    
T  45048255 gcagttttagtcctacctca-tattttcaactccagaaacgcatagaaataacagttttagacttaccctctatgctcaaccatgaaataaacaatgaat 45048353  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||| |||| |||||||||||||| ||| |||||| |||||||||    
T  45048354 aaagcatgcgggtacaaagaatccactgtattcaacacactaac 45048397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 18984249 - 18984363
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||||| |||||||| || | | |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||  ||||||    
T  18984249 ctccaaaaacgcagagaaatgatagttttagacctaacccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaattcacttta 18984348  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  18984349 ttcaacacactaacc 18984363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 17088585 - 17088441
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacc-tatgtttaaccatgaaataaacaaagaa 140  Q
    ||||||||||| ||| |||| ||||||||| || | ||||||| | ||||||||||||||| || ||| || |||| | ||||||||||||||||| |||    
T  17088585 gcagttttagttctacctcc-tattttcaaatctagaaacgcagagaaatgacagttttagacctacccccctatgctcaaccatgaaataaacaaggaa 17088487  T
Q  141 taaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||||||||||||||| ||||| |||||||| | ||| ||||||    
T  17088486 taaaacatgtgggtacaaggaatccactttattaaacacgctaacc 17088441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 6224800 - 6224886
Alignment:
Q  43 cagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaa 129  Q
    ||||||||||| |||||| |||||| |||||||| ||||||||| ||||||||||||||||| ||||||||||| | ||||||||||    
T  6224800 cagttttagtcttatctctctatttccaactccagaaacgcacataaatgacagttttagtcaaaccacctatgctcaaccatgaaa 6224886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 182
Target Start/End: Original strand, 9019103 - 9019213
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| | | ||||||  | ||| |||||| | ||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  9019103 ctccaaaaacgcagagaaattatatttttagatctaccccctatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaaagaatccacttta 9019202  T
Q  172 ttcagcacact 182  Q
    |||| ||||||    
T  9019203 ttcaacacact 9019213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 186
Target Start/End: Complemental strand, 29307368 - 29307243
Alignment:
Q  61 cctattttcaa-ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaa 159  Q
    ||||||||||| ||||| ||||||| | ||||||||||||||| || ||| |||||| | ||||||||||| ||||| |||||||||||||||| ||||     
T  29307368 cctattttcaaactccagaaacgcagagaaatgacagttttagacctacc-cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaag 29307270  T
Q  160 gaatctactttattcagcacactaacc 186  Q
    ||||||| | |||||| ||||||||||    
T  29307269 gaatctattctattcaacacactaacc 29307243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 44291404 - 44291545
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| || |||| | ||||||| |||| ||||||||||||  | |||||||||||  ||||||||||   ||||||||||||| ||| ||||    
T  44291404 gcagttttagtcatacctcc-tgttttcaaatccagaaacgcacaaaatag-cagttttagtcgtaccacctatgcacaaccatgaaataagcaaggaat 44291501  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||| ||| || || |||||| |||||||||||||||||||    
T  44291502 aaaacatatggctaaaaggaatctcctttattcagcacactaac 44291545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 23526758 - 23526859
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||   | ||||||||||||||||||||||||||| ||||||||| |||||| |||||| ||||| | ||||||||||||| ||| ||||    
T  23526758 gcagttttagtccctgccccctattttcaactccaaaaacgcacagaaatgacag-tttagtacaaccatctatgctcaaccatgaaataagcaatgaat 23526856  T
Q  142 aaa 144  Q
    |||    
T  23526857 aaa 23526859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 29020996 - 29021082
Alignment:
Q  58 ctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaa 144  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||||||| |||  ||||| | ||||||||||||||||| |||||||    
T  29020996 ctccctattttcacctccaaaaacgcacataaatgtcagttttagtcctacccgctatgctcaaccatgaaataaacaaggaataaa 29021082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 2868154 - 2868079
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgt 117  Q
    |||||||||||| |||| |||||||| |||||||| ||||||||| || ||||||||||||||||||||| |||||    
T  2868154 gcagttttagtcatatccccctatttccaactccagaaacgcacataagtgacagttttagtccaaccacatatgt 2868079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 17433581 - 17433506
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||||||||| |||||||||||||| | |||| ||||||| |||||||||||||||||||    
T  17433581 cctatgctcaaccatgaaataaacaaggaataaaacatgtgtgcacaaggaatctattttattcagcacactaacc 17433506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 48173867 - 48173993
Alignment:
Q  60 ccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaa 159  Q
    |||||||||||||||||||||| | || |||||||||||||||||  | ||| |||| | || | | ||||||||||| |||||| ||  |||||||||     
T  48173867 ccctattttcaactccaaaaactctcataaatgacagttttagtcatatcacatatgctcaatcgtaaaataaacaaaaaataaagcacttgggtacaag 48173966  T
Q  160 gaatctactttattcagcacactaacc 186  Q
     ||||||||||||| |||| |||||||    
T  48173967 taatctactttattgagcaaactaacc 48173993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 26859241 - 26859313
Alignment:
Q  113 tatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||| ||||||||||||| ||||| |||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  26859241 tatgcttaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctattcagcacactaac 26859313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 2868011 - 2868086
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgt 117  Q
    |||||||||||| ||| ||||||| |  ||||||||||||||||| ||||||||||||||||||||| || |||||    
T  2868011 gcagttttagtcatatttccctatctctaactccaaaaacgcacataaatgacagttttagtccaactacatatgt 2868086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 34011559 - 34011602
Alignment:
Q  177 cacactaacctaatttccgagacatgttacatacctgaaacatg 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  34011559 cacactaacctaatttccgagacatgttacatacctgaaacatg 34011602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 186
Target Start/End: Complemental strand, 9019389 - 9019264
Alignment:
Q  61 cctattttcaa-ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaa 159  Q
    ||||||||||| | ||| ||||||| | |||| |||||||||| ||  || |||||| | ||||||||||| ||||| |||||||||||||||  ||||     
T  9019389 cctattttcaaaccccagaaacgcagagaaataacagttttagacctgcc-cctatgctcaaccatgaaatcaacaaggaataaaacatgtggacacaag 9019291  T
Q  160 gaatctactttattcagcacactaacc 186  Q
    ||||||| | |||||||||||||||||    
T  9019290 gaatctattctattcagcacactaacc 9019264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 39154386 - 39154312
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  39154386 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctattcagcacactaac 39154312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 45048521 - 45048429
Alignment:
Q  94 cagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||| || ||| |||||| ||||||| |||||||| || ||||||| |||||||||||||  |||| ||| |||||| ||||||||||    
T  45048521 cagttttagacctaccccctatgcttaaccacgaaataaataacgaataaagcatgtgggtacaagaaatcgactctattcaacacactaacc 45048429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 5962757 - 5962832
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| |||||  ||||||||||||||| |||||||||||| | |||||| ||||||||||    
T  5962757 cctatgatcaaccatgaaatcaacaagaaataaaacatgtgggcacaaagaatctattctattcaacacactaacc 5962832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 15173460 - 15173385
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| |||||  ||||||||||||||| |||||||||||| | |||| ||||||||||||    
T  15173460 cctatgctcaaccatgaaatcaacaagaaataaaacatgtgggcacaaagaatctattctattaagcacactaacc 15173385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 17112460 - 17112535
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| | || ||||||| | |||||||||||||||||    
T  17112460 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcagaaggaatctattctattcagcacactaacc 17112535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 21856221 - 21856296
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||| | |||| ||||||| | |||||||||||||||||    
T  21856221 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgagcacaaggaatctattctattcagcacactaacc 21856296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 8678720 - 8678794
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| |||||  ||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  8678720 cctatgctcaaccatgaaatcaacaagaaataaaacatgtgggcacaatgaatctattctattcagcacactaac 8678794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 29869976 - 29869910
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||| ||||| ||||||||| |||||| |||| ||||||| | |||||||||||||||||    
T  29869976 aaccatgaaattaacaaggaataaaacttgtgggcacaaggaatctattctattcagcacactaacc 29869910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 48174160 - 48174044
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaa-tgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaa 140  Q
    ||||||||||||| | | ||||||||||||||||| ||||||| ||||| | ||||||||||||  ||| | |||  | || ||| ||||||||||||||    
T  48174160 gcagttttagtcccacc-ccctattttcaactccagaaacgcaaaaaaaataacagttttagtcgtaccgcatattctcaatcataaaataaacaaagaa 48174062  T
Q  141 taaaacatgtgggtacaa 158  Q
    ||||||| ||| ||||||    
T  48174061 taaaacacgtgtgtacaa 48174044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 33144096 - 33144172
Alignment:
Q  111 cctatgtttaaccatgaaat-aaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| |||||| |||||||||||||||| |||| ||||||| |  ||||||||||||||||    
T  33144096 cctatgctcaaccatgaaatcaaacaaggaataaaacatgtgggcacaaggaatctattcaattcagcacactaacc 33144172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 18984485 - 18984410
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| | || ||||||| | |||||| ||||||||||    
T  18984485 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcataaggaatctattctattcaccacactaacc 18984410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 50970457 - 50970532
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| |||||  ||||||||||||||| |||| ||||||| | |||||| ||||||||||    
T  50970457 cctatgctcaaccatgaaatcaacaagcaataaaacatgtgggcacaatgaatctattctattcaacacactaacc 50970532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 15646371 - 15646444
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaa 184  Q
    |||||| | ||| ||||||| ||||| |||||||||||||||| |||||||||||| | |||| | ||||||||    
T  15646371 cctatgctaaactatgaaatcaacaaggaataaaacatgtgggcacaaagaatctattctatttatcacactaa 15646444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 23340453 - 23340401
Alignment:
Q  218 atgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||| ||||||| | ||||||||||||||||  ||||||||||||||||    
T  23340453 atgtcttaaaaattagagattttcttggtttgtgttctgaacaaagtagattc 23340401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 44291582 - 44291635
Alignment:
Q  215 aacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||||||||||||||||  |||||| ||||| |||| |||||||||||    
T  44291582 aacatgtcttagaaattagggtttt--ttggttggtgtgctgaataaagtagattc 44291635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 4636325 - 4636262
Alignment:
Q  123 catgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||||| ||||| |||||||||||||||| |||| ||||||| | |||||| || |||||||    
T  4636325 catgaaatcaacaaggaataaaacatgtgggcacaaggaatctattatattcatcatactaacc 4636262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 5539995 - 5540070
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||  |||| ||||||| | ||||| ||||| |||||    
T  5539995 cctatgctcaaccatgaaatcaacaaggaataaaacatgtggacacaaggaatctattctattccgcacattaacc 5540070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 8678811 - 8678870
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| || ||| ||||| |||| ||||| ||||||    
T  8678811 tgaaacatatcttagaaattagggtttttttttgttagtgtgttgaataaagtggattct 8678870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 29869895 - 29869837
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  29869895 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 29869837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 33144188 - 33144247
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| || ||| ||||| |||| ||||| ||||||    
T  33144188 tgaaacatatcttagaaattagggtttttttttgttagtgtgttgaataaagtggattct 33144247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 39154294 - 39154236
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  39154294 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 39154236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 39485338 - 39485288
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagt 264  Q
    |||||||| |||||||||||||||||||  |||||||||||| |||| |||||    
T  39485338 tgaaacatatcttagaaattagggtttt--ttggtttgtgtgttgaataaagt 39485288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 18984394 - 18984343
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagt 264  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| |||||    
T  18984394 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagt 18984343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 44802616 - 44802557
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttag 102  Q
    ||||||||||| ||| |||| |||||||||||||| |||| || |||||||||| ||||||    
T  44802616 gcagttttagttctacctcc-tattttcaactccagaaacacagaaaaatgacaattttag 44802557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 165; Significance: 3e-88; HSPs: 76)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 42 - 254
Target Start/End: Complemental strand, 8419067 - 8418855
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| |||||||| ||||| ||||| |||||||| | ||||||||||||||||| ||||    
T  8419067 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttaatccaaacacctatgctcaaccatgaaataaacaaggaat 8418968  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8418967 aaaacatgtgggtacaaggaatctactttattcagcacactaacctaatttgcgagacatgttacatacctgaaatatgtcttagaaattagggtttttc 8418868  T
Q  242 ttggtttgtgtga 254  Q
    |||||||||||||    
T  8418867 ttggtttgtgtga 8418855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 38901086 - 38900860
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||  ||||||| ||||| ||||  || ||||||||| ||||||||||||||||||||||| |||  || ||||||||||||||||||||||    
T  38901086 gcagttttagttatatctccttatttccaac--cagaaacgcacataaatgacagttttagtccaaccatctaatttcaaccatgaaataaacaaagaat 38900989  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  38900988 aaaacatgtgggtacaaagaatctactttattcaacacactaacctaatttctgagacatgttacatacctgaagcatgtcttagaaattagggtttttc 38900889  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||||||| |||||||||    
T  38900888 ttggtttgtgtgatgaacagagtagattc 38900860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 46 - 271
Target Start/End: Original strand, 21370798 - 21371025
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaa--tgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataa 143  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||  || |||||||||||| ||||||||||||  ||||||||||||| |||||||||    
T  21370798 ttttagtcctatctccctatttccaactccagaaacgcaaaaaaaaatgtcagttttagtccgaccacctatgttctaccatgaaataaataaagaataa 21370897  T
Q  144 aacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttctt 243  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||    
T  21370898 aacatgtgggtacaaggaatctactttattcagcacactaacataatttccgagacatgttatatacctgaaacatgtcttagaaattagaatttttctt 21370997  T
Q  244 ggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||||| |||| ||||||||||||    
T  21370998 ggtttgtgtgctgaataaagtagattct 21371025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 15029755 - 15029532
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||| | ||||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  15029755 gcagttttagttcgatctccctatttcaaactccagaaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaagtaaacaaagaat 15029656  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    |||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  15029655 aaaacatgtgggtacaaagaatctactttattcag-----taacctaatttccgagacatgttacatacctgaaacatgtcttagaaattatggtttttt 15029561  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    || ||||||||  ||||||||||||||||    
T  15029560 ttagtttgtgtactgaacaaagtagattc 15029532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 88 - 270
Target Start/End: Original strand, 18149869 - 18150051
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacct 187  Q
    ||||||||||||||||| |||||| |||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18149869 aaatgacagttttagtctaaccacttatgctcaaccatgaaataaacaaagaataaaacatgtgggtacaatgaatctactttattcagcacactaacct 18149968  T
Q  188 aatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18149969 aatttccgagacatgctacatacccgaaacatgtcttagaaattagggtttttcttggtttgtgtgctgaacaaagtagattc 18150051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 5161683 - 5161906
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||| ||||||| ||||| |||||||||| | |||||||||||||||| |||||||||||| | ||||||||||||||||||||||    
T  5161683 gcagttttagtcttatcttcctatttccaacttcaaaaacgcatagaaatgacagttttagttcaaccacctatgctcaaccatgaaataaacaaagaat 5161782  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||| | ||||||    
T  5161783 aaaacatgtgggtacaaagaatctactttattaagcacactaacctaatttccgagacatgttacata----aaacatgtcttagaaattatgatttttc 5161878  T
Q  242 ttggtttgtgtgatgaacaaagtagattc 270  Q
    |||| ||||||| |||| |||||||||||    
T  5161879 ttgg-ttgtgtgctgaagaaagtagattc 5161906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 7 - 253
Target Start/End: Original strand, 19291422 - 19291667
Alignment:
Q  7 tcgaagaatatcgtcctgaaactatatgnnnnnnngcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtcca 106  Q
    ||||| || |||||||| ||||||||||       |||||||||||| ||||||| ||||| |||||||| ||||||||| |||||||||||||||||||    
T  19291422 tcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcttatctccttatttccaactccataaacgcacagaaatgacagttttagtcca 19291521  T
Q  107 accacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttac 206  Q
    |||||||||| | || |||||||||||||| |||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  19291522 accacctatgctcaatcatgaaataaacaa-gaataaaatatgtgggtacaagaaatctactttattcagcacactaacctaatttccgagatatgttac 19291620  T
Q  207 atacctgaaacatgtcttagaaattagggtttttcttggtttgtgtg 253  Q
    ||||||||||||||||||||||||||| |||||| ||  ||||||||    
T  19291621 atacctgaaacatgtcttagaaattagagtttttttttatttgtgtg 19291667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 42 - 269
Target Start/End: Original strand, 22651445 - 22651672
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| || ||||    
T  22651445 gcagttttagtcctacctccttattttcaactccagaaacgcacaaaaatggcagttttagtccaaccacctatgctcaaccatgaaataaataaggaat 22651544  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    |||  ||||||||| || ||||||||||||||||||| |||||||||||| |  ||||||||||||||| |||||||||||||||||||| ||||||||     
T  22651545 aaagtatgtgggtataaggaatctactttattcagcagactaacctaattactaagacatgttacatacatgaaacatgtcttagaaatttgggtttttt 22651644  T
Q  242 ttggtttgtgtgatgaacaaagtagatt 269  Q
    || ||| ||||| |||| ||||||||||    
T  22651645 tttgttagtgtgctgaataaagtagatt 22651672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 43 - 186
Target Start/End: Original strand, 28289785 - 28289928
Alignment:
Q  43 cagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaata 142  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  28289785 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgttcaaccatgaaataaacaaggaata 28289884  T
Q  143 aaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    || ||||||||||||||||||||||||| |||||||||| ||||    
T  28289885 aatcatgtgggtacaaagaatctactttgttcagcacacaaacc 28289928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 28290090 - 28289952
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  28290090 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccatctatgctcaaccatgaaataaacaaagaat 28289991  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcaca 180  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  28289990 aaaacatgtgggtacaaggaatctactttattcagcaca 28289952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 211
Target Start/End: Original strand, 14340480 - 14340648
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||| ||||||||| |||||| |||||| | ||||  ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  14340480 gcagttttaatcctatctctctatttccaactctagaaacctacagaaatgacagttttagtccaaccacttatgttcaaccatgaaataaacaaagaat 14340579  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacc 211  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| |||||    
T  14340580 aaaacatgtgggtacaaagaatctactttatacaacacactaa-ctaatttccgagacatgttagatacc 14340648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 21371138 - 21370998
Alignment:
Q  46 ttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaa 145  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||||||||||| | ||||||||||||||||| |||||||     
T  21371138 ttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagttcaaccacctatgctcaaccatgaaataaacaaggaataaat 21371039  T
Q  146 catgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  21371038 catgtgggtacaaagaatctactttattcagcacacaaacc 21370998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 42 - 216
Target Start/End: Complemental strand, 4967215 - 4967041
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||| |||||||||  ||||| | ||||||||| |||||| ||||||||||||||||| |||| | || |||||||||||||| ||||    
T  4967215 gcagttttagtcctatatccctatttctaactctagaaacgcacataaatgatagttttagtccaaccacatatgctcaatcatgaaataaacaaggaat 4967116  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaa 216  Q
    ||| |||||||||||||  ||||||||||||||||| ||||||||||||||  |||||||||||||||| |||||    
T  4967115 aaagcatgtgggtacaagaaatctactttattcagcgcactaacctaatttatgagacatgttacatacatgaaa 4967041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 18150169 - 18150025
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||| |||||||| |||||||||||| | |||||| |||||||||| ||||    
T  18150169 gcagttttagtcctatctccctatttccaactccagaaacgcacataaatgaccgttttagttcaaccacctatgctcaaccataaaataaacaaggaat 18150070  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| |||||||||| || ||||||||||| |||||||||| ||||    
T  18150069 aaatcatgtgggtataaggaatctactttgttcagcacacaaacc 18150025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 15115541 - 15115402
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||| |||||||| |||||| ||||||||||| |||||||||||||||| ||||||| |||| | ||||||||||||||||| ||||    
T  15115541 gcagttttagtcatatcgccctatttccaactcaaaaaacgcacataaatgacagttttagttcaaccacatatgctcaaccatgaaataaacaaggaat 15115442  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||| ||||||||||||| |||||||||||||| |||||||    
T  15115441 aaagcatgtgggtacaaggaatctactttatttagcacac 15115402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 39083460 - 39083595
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||| ||||| |||||||| |||| |||| |||||||||||||||||||| ||| |||| | || ||||||||||||||| |||    
T  39083460 gcagttttagtcatatctccatatttccaactccagaaacacacagaaatgacagttttagtccaatcacatatgctcaatcatgaaataaacaaaaaat 39083559  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagc 177  Q
    ||||||||||||||||| ||||||||||||||||||    
T  39083560 aaaacatgtgggtacaaggaatctactttattcagc 39083595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 38900744 - 38900886
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||| |||||||||||  |||||||||||||||| | ||||||||||||||||| ||||    
T  38900744 gcagttttagtcctatctccctatttccaactccataaacgtacataaatgacagtt--agtccaaccacctatgctcaaccatgaaataaacaaggaat 38900841  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| |||||||||| || ||||||||| | |||| ||||| ||||    
T  38900842 aaatcatgtgggtataaggaatctactctgttcatcacacaaacc 38900886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 22651760 - 22651648
Alignment:
Q  73 tccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttat 172  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| | |||||||||||||| || ||||||| |||||| ||||||  ||||||||||||    
T  22651760 tccataaacgcacataaatgacagttttagtccaaccacctatgctcaaccatgaaataaataaggaataaagcatgtgagtacaagaaatctactttat 22651661  T
Q  173 tcagcacactaac 185  Q
    |||||||||||||    
T  22651660 tcagcacactaac 22651648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 14340851 - 14340710
Alignment:
Q  44 agttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataa 143  Q
    |||||||||||||||||| ||||| |||||||||||||| | | ||||||||||||||||| |||||  |||| | ||||||||||||||||| ||||||    
T  14340851 agttttagtcctatctccttatttccaactccaaaaacgtagagaaatgacagttttagtcaaaccatttatgctcaaccatgaaataaacaaggaataa 14340752  T
Q  144 aacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    | ||||| |||| || ||||||||||| |||||||||| ||||    
T  14340751 atcatgt-ggtagaaggaatctactttgttcagcacacaaacc 14340710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 28495286 - 28495143
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||| |||| |||||||||||||| || |||| | |||||| |||||||| || ||| | |||| | ||||||||||||||||| ||||    
T  28495286 gcagttttagtcctacctcc-tattttcaactccagaaccgcagagaaatgatagttttagacctacctcatatgctcaaccatgaaataaacaaggaat 28495188  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||||||||| ||||| |||||||| | ||||||||||    
T  28495187 aaaacatgtgggtacaaggaatccactttattaaacacactaacc 28495143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 32305918 - 32306060
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    ||||||||||||||| |||  |||||||||||||| |||| || | ||||||||||||||| |  |||  ||||||| ||||||||||||||||||||||    
T  32305918 gcagttttagtcctacctct-tattttcaactccagaaacacagagaaatgacagttttagacttacccgctatgttcaaccatgaaataaacaaagaat 32306016  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||  |||||||  ||||||||||| |||||||||||||    
T  32306017 aaaacatgcaggtacaagaaatctactttaatcagcacactaac 32306060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 2865170 - 2865056
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||| | | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  2865170 ctccaaaaacgtagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 2865071  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  2865070 ttcaacacactaacc 2865056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 8461060 - 8461174
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||| ||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  8461060 ctccaaaaatgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 8461159  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  8461160 ttcaacacactaacc 8461174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 24331975 - 24331861
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || | | |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  24331975 ctccaaaaacgcagagaaatgacagttttagacctatcccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 24331876  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  24331875 ttcaacacactaacc 24331861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 164590 - 164492
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  164590 aaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttattcaacacactaacc 164492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 15709100 - 15709214
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | |||||||||||||||||  |||||| ||||||| ||||||||||| ||||||    
T  15709100 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaagaaataaagcatgtggatacaaagaatccacttta 15709199  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  15709200 ttcaacacactaacc 15709214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 18183384 - 18183271
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| |||||||||| || ||| |||||| | ||||||||||||||||  ||||||| ||||||||||||||||||| ||||||    
T  18183384 ctccaaaaacgcagagaaataacagttttagacctaccccctatgctcaaccatgaaataaacagggaataaagcatgtgggtacaaagaatccacttta 18183285  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  18183284 ttcaacacactaac 18183271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 27307501 - 27307361
Alignment:
Q  44 agttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataa 143  Q
    ||||||||||||| |||| |||||||||||||| ||| ||| | |||||||| ||||||  | ||| |||||| | |||||||||||||||||| |||||    
T  27307501 agttttagtcctacctcc-tattttcaactccagaaatgcagagaaatgacatttttagatccaccccctatgctcaaccatgaaataaacaaaaaataa 27307403  T
Q  144 aacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||| ||||||| | ||||| |||||||||| |||||||||    
T  27307402 aacatttgggtactaggaatccactttattcaacacactaac 27307361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 4966916 - 4967043
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| |||| |||||||| |||||| | ||| ||||| ||||||||||||| | ||||||||||||| |  |||||||||||||||| ||||    
T  4966916 gcagttttagtcatatc-ccctatttccaactctagaaatgcacagaaatgacagttttgggccaaccacctatgctctaccatgaaataaacaaggaat 4967014  T
Q  142 aaaacatgtgggtacaaagaatctacttt 170  Q
    ||| ||| ||||||||| |||||||||||    
T  4967015 aaagcatctgggtacaaggaatctacttt 4967043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 16018731 - 16018830
Alignment:
Q  86 aaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||||||||||| || ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||  |||||||||| |||||||||    
T  16018731 aaaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaattcactttattcaacacactaac 16018830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 149
Target Start/End: Complemental strand, 32697669 - 32697562
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||  || |||||||||| |||||||| |||| |||| ||||||||  ||||||||||||||||||| | ||||||||||||||||| ||||    
T  32697669 gcagttttagtgatacctccctatttccaactccagaaacacacagaaatgacaaatttagtccaaccacctatgctcaaccatgaaataaacaaggaat 32697570  T
Q  142 aaaacatg 149  Q
    ||||||||    
T  32697569 aaaacatg 32697562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 8647568 - 8647682
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || |||  ||||| | | ||||||||||||||| ||||||| |||||||||||||| |||| ||||||    
T  8647568 ctccaaaaacgcagagaaatgacagttttagacctaccctctatgctcatccatgaaataaacaaggaataaagcatgtgggtacaaaaaatccacttta 8647667  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  8647668 ttcaacacactaacc 8647682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 24362251 - 24362137
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| |  | | |||||| | ||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||    
T  24362251 ctccaaaaacgcagagaaatgacagttttagacttatcccctatgctcaaccatgaaataaacaaggaataaagcatctgggtacaaagaatccacttta 24362152  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  24362151 ttcaacacactaacc 24362137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 25000220 - 25000334
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||| | | |||||||||||||||  | ||| | |||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  25000220 ctccaaaaacgtagagaaatgacagttttagatctacctcatatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 25000319  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  25000320 ttcaacacactaacc 25000334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 5161978 - 5161885
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacac 181  Q
    ||||||| |||||| |||||||||||||| | |||||||||||||| || ||||||| ||||||||||||| ||||||||||| ||||||||||    
T  5161978 aaatgacggttttaatccaaccacctatgctcaaccatgaaataaataaggaataaatcatgtgggtacaaggaatctactttcttcagcacac 5161885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 95 - 186
Target Start/End: Original strand, 28495006 - 28495097
Alignment:
Q  95 agttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||||| || |||||||||| | |||||||||||||||||  |||||| ||||||||||||| ||||||||| |||||||||||||||||    
T  28495006 agttttagacctaccacctatgctcaaccatgaaataaacaagaaataaagcatgtgggtacaatgaatctactatattcagcacactaacc 28495097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 5819344 - 5819230
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||||||||||||||  | ||| |||||| | ||||||||||||||||| ||||||| |||||||||||||| |||| | | ||    
T  5819344 ctccaaaaacgcaaagaaatgacagttttagatctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaaaaatccattgta 5819245  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  5819244 ttcaacacactaacc 5819230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 14340674 - 14340736
Alignment:
Q  208 tacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  14340674 tacctgaaacatgtcttagaaattatggtttttcttggtttgtgtgctgaacaaagtagattc 14340736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 19359266 - 19359380
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||| ||| || ||| |||||| | ||||||||||||||||| ||||||| ||||| | |||||| |||| ||||||    
T  19359266 ctccaaaaacgcagagaaatgacagttctagacctaccccctatgctcaaccatgaaataaacaaggaataaagcatgtagctacaaaaaatccacttta 19359365  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  19359366 ttcaacacactaacc 19359380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 29455157 - 29455043
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||| | | ||||||||||||||| |  ||| | |||| | |||||||||||||| || ||||||| ||||||||||||||||||| ||||||    
T  29455157 ctccaaaaacgtagagaaatgacagttttagacatacctcatatgctcaaccatgaaataaataaggaataaagcatgtgggtacaaagaatccacttta 29455058  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  29455057 ttcaacacactaacc 29455043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 14215658 - 14215547
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||| | | ||||||||||||||| || ||| |||| | | ||||||||||||||||| ||||||| ||  ||||||||||||||| ||||||    
T  14215658 ctccaaaaacgtagagaaatgacagttttagacctaccccctaagctcaaccatgaaataaacaaggaataaagca--tgggtacaaagaatccacttta 14215561  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  14215560 ttcaacacactaac 14215547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 15115329 - 15115423
Alignment:
Q  176 gcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||| ||||||| | |||||||||||||| ||||||||||||||||||||  ||||||| |||| ||||||| | || |||||||||||    
T  15115329 gcacactaacataatttctgggacatgttacatacttgaaacatgtcttagaaattgaggttttttttggattgtgtgctaaataaagtagattc 15115423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 24325610 - 24325512
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||||||| |  | | |||||| | ||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||| ||||||||||    
T  24325610 aaatgacagttttagacttatcccctatgctcaaccatgaaataaacaaggaataaagcatctgggtacaaagaatccactttattcaacacactaacc 24325512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 15372287 - 15372175
Alignment:
Q  73 tccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttat 172  Q
    |||||||||||| | ||||||||||||||| || ||| | |||| | |||||| |||||| ||| ||||||| |||||||||||||| |||| |||||||    
T  15372287 tccaaaaacgcagagaaatgacagttttagacctacctcttatgctcaaccattaaataa-caaggaataaatcatgtgggtacaaataatccactttat 15372189  T
Q  173 tcagcacactaacc 186  Q
    ||| ||||||||||    
T  15372188 tcaacacactaacc 15372175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 16753014 - 16752863
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtc---------caaccacctatgtttaaccatgaaataa 132  Q
    |||||||||| |||| |||| |||||||||||||| ||||||| ||||||| ||||||||| |         | |||  ||||| | |||||||||||||    
T  16753014 gcagttttagacctaactcc-tattttcaactccagaaacgcagaaaaatggcagttttaggcagtttagacctacccgctatgctcaaccatgaaataa 16752916  T
Q  133 acaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||  ||||||||||||||||||||  |||| ||||||||||||||||||||    
T  16752915 acaagaaataaaacatgtgggtacaagaaatcgactttattcagcacactaac 16752863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 24325390 - 24325465
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||||||||||| | |||||||||||||||||    
T  24325390 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaagaatctattctattcagcacactaacc 24325465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 24362015 - 24362090
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||||||||||| | |||||||||||||||||    
T  24362015 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaagaatctattctattcagcacactaacc 24362090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 27307222 - 27307313
Alignment:
Q  94 cagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||| || |||  ||||| | ||||||||||||||||| ||||||| |||||| |||||| ||||||||| ||||||||||||||||    
T  27307222 cagttttagacctacccgctatgctcaaccatgaaataaacaaggaataaagcatgtgagtacaatgaatctactctattcagcacactaac 27307313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 10721947 - 10722036
Alignment:
Q  94 cagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaa 184  Q
    ||||||||| || ||| ||||| || ||||||||||||||||| ||||||| |||||||||||||  |||||||| |||||||||||||||    
T  10721947 cagttttagacctacc-cctatattcaaccatgaaataaacaaggaataaagcatgtgggtacaagaaatctactctattcagcacactaa 10722036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 19359502 - 19359428
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| ||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  19359502 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggtacaaggaatctattctattcagcacactaac 19359428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 163
Target Start/End: Original strand, 32697462 - 32697557
Alignment:
Q  69 caactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaac-catgaaataaacaaagaataaaacatgtgggtacaaagaat 163  Q
    |||||||| |||| |||| ||||||||  ||||||||||||||||||| | | | |||||||||||||| ||||||| ||||||||||||| ||||    
T  32697462 caactccagaaacacacagaaatgacaaatttagtccaaccacctatgctcatctcatgaaataaacaaggaataaatcatgtgggtacaaggaat 32697557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 2864933 - 2865007
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  2864933 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattatattcagcacactaac 2865007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 14463756 - 14463818
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttatt 173  Q
    |||||| | ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  14463756 cctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaagaatccactttatt 14463818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 14463896 - 14463830
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||| || |||||||    
T  14463896 aaccatgaaataaacaaggaataaagcatctgggtacaaagaatccactttattcaacatactaacc 14463830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 25000455 - 25000382
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaa 184  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||||||| | |||||||||||||||    
T  25000455 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctattcagcacactaa 25000382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 28289946 - 28289901
Alignment:
Q  226 gaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  28289946 gaaattagggtttttcttggtttgtgtgctgaacaaagtagattct 28289901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 164369 - 164444
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| ||||  |||||| | |||||||||||||||||    
T  164369 cctatgctcaaccatgaaatgaacaaggaataaaacatgtgggcacaagaaatctattatattcagcacactaacc 164444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 8647804 - 8647729
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| ||||||||||||||||  ||| ||||||| | |||||||||||||||||    
T  8647804 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcgcaaggaatctattctattcagcacactaacc 8647729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 16018953 - 16018878
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| ||||||||||| |||| |||| ||||||| | |||||||||||||||||    
T  16018953 cctatgctcaaccatgaaatcaacaaggaataaaacatatgggcacaaggaatctattctattcagcacactaacc 16018878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 24331740 - 24331815
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||| | |||| ||||||| | |||||||||||||||||    
T  24331740 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgagcacaaggaatctattctattcagcacactaacc 24331815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 18183133 - 18183224
Alignment:
Q  94 cagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||| || ||| |||||| | ||||||||||| |||||  ||||||||||||||| |||| ||||||| | |||||||||||| ||||    
T  18183133 cagttttaggcctacc-cctatgctcaaccatgaaatcaacaagaaataaaacatgtgggcacaaggaatctattatattcagcacaccaacc 18183224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 8461206 - 8461147
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  8461206 tgaaacatatcttagaaattagggttttttttggttagtgtgttgaataaagtggattct 8461147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 14215420 - 14215495
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||||||| | | || ||||||||||||    
T  14215420 cctatggtcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctgtttagcacactaacc 14215495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 5819108 - 5819182
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| |||| || | |||||| |||||||||    
T  5819108 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatatattctattcaacacactaac 5819182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 15709327 - 15709262
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||||| ||||| |||||||||||||||| ||||  ||| || | ||||||||||||||||    
T  15709327 aaccatgaaatcaacaaggaataaaacatgtgggcacaagaaatttattctattcagcacactaac 15709262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 164460 - 164519
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| | |||| ||||| |||| ||||| ||||||    
T  164460 tgaaacatatcttagaaattagggtttttttgggttagtgtgttgaataaagtggattct 164519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 2865025 - 2865083
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| ||||||||||||||| ||||||||||| ||||| |||| ||||| ||||||    
T  2865025 tgaaacatatcttagaaattaggg-ttttcttggttagtgtgttgaataaagtggattct 2865083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 15709245 - 15709187
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  15709245 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 15709187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 24325481 - 24325539
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  24325481 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 24325539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 24362106 - 24362164
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  24362106 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 24362164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 8461297 - 8461223
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||||| | ||||||||| | ||||| |||||||||| ||||| || | ||||||| | ||||||||||||||||    
T  8461297 cctatgctcaaccatgaagtcaacaatgaataaaacacgtgggcactaggaatctattctattcagcacactaac 8461223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 20265846 - 20265960
Alignment:
Q  113 tatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaa---------cctaatttccgagacatgt 203  Q
    |||| ||||||||||||||||||| |||||||   || |||||||| |||||||||| ||||  ||||| ||         |||||||||  ||||||||    
T  20265846 tatgcttaaccatgaaataaacaaggaataaagtgtgcgggtacaaggaatctacttcattcttcacacaaatcaaaaaaccctaatttctaagacatgt 20265945  T
Q  204 tacatacctgaaaca 218  Q
    |||||||||||||||    
T  20265946 tacatacctgaaaca 20265960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 24331831 - 24331888
Alignment:
Q  213 gaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    ||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  24331831 gaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 24331888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 15372144 - 15372200
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagatt 269  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||    
T  15372144 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggatt 15372200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 20265946 - 20265893
Alignment:
Q  215 aacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||||||||||||||||||  ||| ||||||||| |||  ||||||||||    
T  20265946 aacatgtcttagaaattagggtttt--ttgatttgtgtgaagaatgaagtagattc 20265893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 41834504 - 41834445
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttag 102  Q
    ||||||||||||||| |||| ||||||||||||   ||||||| | |||||||||||||||    
T  41834504 gcagttttagtcctacctcc-tattttcaactcttgaaacgcagagaaatgacagttttag 41834445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 163; Significance: 4e-87; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 44 - 270
Target Start/End: Complemental strand, 46711 - 46485
Alignment:
Q  44 agttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataa 143  Q
    ||||||||| ||||| |||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||| | || |||||||||||||| ||||||    
T  46711 agttttagttctatcaccctatttccaactccaaaaacgcacataaatgacaattttggtccaaccacctatgctcaatcatgaaataaacaaggaataa 46612  T
Q  144 aacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttctt 243  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  46611 aacatgtgggtacaaggaatctactttatttagcacactaacctaatttccgagacatgttacatacctgaaacatgtattagaaattagggtttttctt 46512  T
Q  244 ggtttgtgtgatgaacaaagtagattc 270  Q
    |||||||||| | ||||||||| ||||    
T  46511 ggtttgtgtgctaaacaaagtaaattc 46485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 46367 - 46511
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||| ||||||||||||| ||| |||| ||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  46367 gcagttttagtcatatctccctatttccaattccataaatgcacaaaaatgacagttttagtccaaccacctatgctcaaccatgaaataaacaaggaat 46466  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||| ||||||||||||| |||| |||||| || ||||||| ||||    
T  46467 aaatcatgtgggtacaaggaatttactttgtttagcacacaaacc 46511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 42 - 269
Target Start/End: Original strand, 6492 - 6718
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||| ||||||| ||||| || ||||||||| |||||||||||||| ||||||||| |||| | |||||| |||||||||||||||    
T  6492 gcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccacatatgctcaaccataaaataaacaaagaat 6591  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  6592 aaaacatgtgggtacaaggaatctactttattcaacacactaacctaatttctgagacatgttacatacctgcaacatgtctgagaaattaggg-ttttc 6690  T
Q  242 ttggtttgtgtgatgaacaaagtagatt 269  Q
    ||||||| |||| |||||||||||||||    
T  6691 ttggtttctgtgttgaacaaagtagatt 6718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 6826 - 6699
Alignment:
Q  53 cctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgg 152  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| | |||||||||||||||||  |||||| |||||||    
T  6826 cctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaattaataaatcatgtgg 6727  T
Q  153 gtacaaagaatctactttattcagcaca 180  Q
    ||||||  |||||||||| |||| ||||    
T  6726 gtacaagcaatctactttgttcaacaca 6699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 42 - 269
Target Start/End: Original strand, 6510 - 6736
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||||| ||||||| ||||| || ||||||||| |||||||||||||| ||||||||| |||| | |||||| |||||||||||||||    
T  6510 gcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccacatatgctcaaccataaaataaacaaagaat 6609  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacctaatttccgagacatgttacatacctgaaacatgtcttagaaattagggtttttc 241  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  6610 aaaacatgtgggtacaaggaatctactttattcaacacactaacctaatttctgagacatgttacatacctgcaacatgtctgagaaattaggg-ttttc 6708  T
Q  242 ttggtttgtgtgatgaacaaagtagatt 269  Q
    ||||||| |||| |||||||||||||||    
T  6709 ttggtttctgtgttgaacaaagtagatt 6736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 6844 - 6717
Alignment:
Q  53 cctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgg 152  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| | |||||||||||||||||  |||||| |||||||    
T  6844 cctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacatatgctcaaccatgaaataaacaattaataaatcatgtgg 6745  T
Q  153 gtacaaagaatctactttattcagcaca 180  Q
    ||||||  |||||||||| |||| ||||    
T  6744 gtacaagcaatctactttgttcaacaca 6717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 16626 - 16740
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | ||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  16626 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaacaaagaataaagcatgtgggtacaaagaatccacttta 16725  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  16726 ttcaacacactaacc 16740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 16862 - 16789
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaa 184  Q
    |||||| | ||||||||||| |||||||||||||||||||||| |||| ||||||| | |||||||||||||||    
T  16862 cctatgctcaaccatgaaatcaacaaagaataaaacatgtgggcacaaggaatctattctattcagcacactaa 16789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 16771 - 16713
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  16771 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 16713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 74; Significance: 5e-34; HSPs: 3)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 4923 - 5036
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| |||||||||| || ||| |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4923 ctccaaaaacgcagagaaataacagttttagacctaccccctatgctcaaccatgaaataaacaaggaataaaacatgtgggtacaaagaatctacttta 5022  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  5023 ttcaacacactaac 5036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 5069 - 5010
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| ||||||||||||||||||||  | ||| ||||| |||| ||||||||||||    
T  5069 tgaaacatatcttagaaattagggttttttattgttagtgtgttgaataaagtagattct 5010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 5151 - 5085
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||| ||| | |||||||||||||| | |||| ||||||| | ||| |||||||||||||    
T  5151 aaccatgaaatcaaccaggaataaaacatgtgtgcacaatgaatctattatatccagcacactaacc 5085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 73; Significance: 2e-33; HSPs: 5)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 205813 - 205670
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaat 141  Q
    |||||||||||||||  ||| |||||||||||||||||||||| | ||||| ||||||||| || ||| |||||| | ||||||||||||||||| | ||    
T  205813 gcagttttagtcctacgtcc-tattttcaactccaaaaacgcagagaaatggcagttttagacctaccccctatgctcaaccatgaaataaacaaggcat 205715  T
Q  142 aaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    ||||||||||| ||||| ||||||||||||||||| |||| ||||    
T  205714 aaaacatgtggttacaatgaatctactttattcagaacaccaacc 205670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 64432 - 64546
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| ||  ||||||||||||| | ||||||| ||||||||||||||||||| ||||||    
T  64432 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgcttttccatgaaataaactaggaataaagcatgtgggtacaaagaatccacttta 64531  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  64532 ttcaacacactaacc 64546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 205051 - 205194
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaac-cacctatgtttaaccatgaaataaacaaagaa 140  Q
    ||||||||||||||| |||| |||||||||||| | |||| || | |||||  |||||||| || |  | |||||  | |||||||||||||||||||||    
T  205051 gcagttttagtcctacctcc-tattttcaactctagaaacacagagaaatggaagttttagacctatacccctatactcaaccatgaaataaacaaagaa 205149  T
Q  141 taaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    |||| |||||||||||||  ||||||||||||| |||||||||||    
T  205150 taaagcatgtgggtacaagtaatctactttatttagcacactaac 205194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 205558 - 205624
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| ||||||| || ||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  205558 aaccattaaataaagaaggaataaagcatgtgggtacaaagaatctactttatttagcacaccaacc 205624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 64662 - 64597
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||||| ||| | |||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  64662 aaccatgaaatcaacgaggaataaaacatgtgggcacaaggaatctattctattcagcacactaac 64597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 84493 - 84418
Alignment:
Q  195 gagacatgttacatacctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattc 270  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  84493 gagacatgttacatacctgaaacatgtcttagaaattagagtttttcttggtttgtgtgctgaacaaagtagattc 84418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 78417 - 78506
Alignment:
Q  42 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaata 131  Q
    ||||||||||||||||||| |||||| |||||||| ||| ||| | |||||||| |||||||||||||||||||| | ||||||||||||    
T  78417 gcagttttagtcctatctctctatttccaactccagaaatgcatagaaatgacaattttagtccaaccacctatgctcaaccatgaaata 78506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 84385 - 84444
Alignment:
Q  127 aaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||||||| ||||||| ||||||||||||  ||||||||||| |||||||||| ||||    
T  84385 aaataaacaaggaataaatcatgtgggtacacggaatctactttgttcagcacacaaacc 84444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 134088 - 133974
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | |||||||||||||| || ||||||| ||||||||||||||||||| ||||||    
T  134088 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaaccatgaaataaataaggaataaagcatgtgggtacaaagaatccacttta 133989  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  133988 ttcaacacactaacc 133974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 133943 - 134001
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| ||||||||||||||| ||||||||||| ||||| |||| ||||| ||||||    
T  133943 tgaaacatatcttagaaattaggg-ttttcttggttagtgtgttgaataaagtggattct 134001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 1797 - 1911
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | || ||||||||||| || |||||||||||| |||||||||||||| ||||||    
T  1797 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgatcaaacatgaaataaaaaaggaataaaacatgagggtacaaagaatccacttta 1896  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  1897 ttcaacacactaacc 1911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 2033 - 1958
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||||| ||||||||||| ||||| |||||||||||||||| |||| ||||||| | |||||||||||||||||    
T  2033 cctatgttcaaccatgaaatcaacaaggaataaaacatgtgggcacaatgaatctattctattcagcacactaacc 1958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 1942 - 1884
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  1942 tgaaacatatcttagaaattagggttttt-ttggttagtgtgttgaataaagtggattct 1884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 4622 - 4508
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    |||||||||| || | ||||||||||||||| || ||| |||||| | | ||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  4622 ctccaaaaacacagagaaatgacagttttagacctaccccctatgctcatccatgaaataaacaaggaataaagcatgtgggtacaaagaatccacttta 4523  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  4522 ttcaacacactaacc 4508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 4382 - 4449
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagca 178  Q
    |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||||||| | |||||||||    
T  4382 cctatgctcaaccatgaaatcaacaaggaataaaacatgtgggcacaaggaatctattctattcagca 4449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 4476 - 4535
Alignment:
Q  212 tgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||    
T  4476 tgaaacatatcttagaaattagggttttttttggttagtgtgttgaataaagtggattct 4535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 42574 - 42460
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | ||||||||||||||| || ||| |||||| | || ||||||||||| || ||||||| ||||||||||||||||||| ||||||    
T  42574 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgctcaatcatgaaataaataaggaataaagcatgtgggtacaaagaatccacttta 42475  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  42474 ttcaacacactaacc 42460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 42288 - 42413
Alignment:
Q  61 cctattttcaa-ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaa 159  Q
    ||||||||||| || || ||||||| | ||||||||||||||| || ||| |||||| | ||| ||||||| ||||| |||||||||||||||| ||||     
T  42288 cctattttcaaacttcagaaacgcagagaaatgacagttttagacctacc-cctatgctcaactatgaaatcaacaaggaataaaacatgtgggcacaat 42386  T
Q  160 gaatctactttattcagcacactaacc 186  Q
    ||||||| | |||||||||| ||||||    
T  42387 gaatctattctattcagcaccctaacc 42413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 42427 - 42487
Alignment:
Q  211 ctgaaacatgtcttagaaattagggtttttcttggtttgtgtgatgaacaaagtagattct 271  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||| |||| ||||| ||||||    
T  42427 ctgaaacatatcttagaaattagggtgttttttggttagtgtgttgaataaagtggattct 42487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 10751 - 10864
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||| ||| | ||||||||||||||| |  ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||| ||||| ||||||    
T  10751 ctccaaaaatgcagagaaatgacagttttagacgtaccccctatgctcaaccatgaaataaacaaggaataaagcatgtgggtacaaggaatccacttta 10850  T
Q  172 ttcagcacactaac 185  Q
    |||| |||||||||    
T  10851 ttcaacacactaac 10864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 10990 - 10915
Alignment:
Q  111 cctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaacc 186  Q
    |||||| | |||||| |||| ||||| |||||||||||||||| |||| ||||| | | ||||||||| |||||||    
T  10990 cctatgctcaaccataaaatcaacaaggaataaaacatgtgggcacaaggaatcgattctattcagcatactaacc 10915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 15231 - 15355
Alignment:
Q  61 cctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaag 160  Q
    ||||||||||||| || ||||||||| |||| ||| |||||| || | | | |||| |  ||||| |||||||||| |||||||  |||| ||||||||     
T  15231 cctattttcaacttcataaacgcacagaaataacaattttagacctatcccttatgctcgaccattaaataaacaaggaataaagtatgttggtacaaaa 15330  T
Q  161 aatctactttattcagcacactaac 185  Q
    |||||||||||||||||||||||||    
T  15331 aatctactttattcagcacactaac 15355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 15462 - 15408
Alignment:
Q  120 aaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattc 174  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  15462 aaccatgaaataaacaaggaataaagcatgtgggtacaaggaatctactttattc 15408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 18964 - 19065
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| |||||||||| |  ||| | |||||| ||||||||||||||||| ||||||||||| ||||||||||||||  ||||||    
T  18964 ctccaaaaacgcagagaaataacagttttagacttacctc-tatgttcaaccatgaaataaacaaggaataaaacatctgggtacaaagaattcacttta 19062  T
Q  172 ttc 174  Q
    |||    
T  19063 ttc 19065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 882 - 996
Alignment:
Q  72 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctacttta 171  Q
    ||||||||||||| | |||| |||||||||| |  ||| | |||| | ||||| ||||||||||| ||||||| |||||| ||||||| |||  ||||||    
T  882 ctccaaaaacgcagagaaataacagttttagacataccccttatgctcaaccacgaaataaacaaggaataaagcatgtgtgtacaaataattcacttta 981  T
Q  172 ttcagcacactaacc 186  Q
    |||| ||||||||||    
T  982 ttcaacacactaacc 996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 186
Target Start/End: Complemental strand, 1167 - 1042
Alignment:
Q  61 cctattttcaa-ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaa 159  Q
    ||||||||||| | ||| ||||||| ||||||| ||||||||| || ||| |||||| | |||||||| || ||||| ||||||||||||| || |||      
T  1167 cctattttcaaaccccagaaacgcagaaaaatggcagttttagacccacc-cctatgctcaaccatgatatcaacaaggaataaaacatgtaggcacatg 1069  T
Q  160 gaatctactttattcagcacactaacc 186  Q
     |||||| | || ||||||||||||||    
T  1068 aaatctattctactcagcacactaacc 1042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 10272 - 10175
Alignment:
Q  88 aaatgacagttttagtccaaccacctatgtttaaccatgaaataaacaaagaataaaacatgtgggtacaaagaatctactttattcagcacactaac 185  Q
    ||||||||||||||  || ||| |||||| | ||||||||||| ||||| |||||||| || |||| ||||  |||||| | ||||||||||| ||||    
T  10272 aaatgacagttttaaacctaccccctatgctcaaccatgaaatcaacaaggaataaaatatttgggcacaagaaatctattctattcagcacagtaac 10175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University