View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7839_low_43 (Length: 219)
Name: NF7839_low_43
Description: NF7839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7839_low_43 |
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Alignment Details
Target: chr7 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 37420943 - 37421127
Alignment:
| Q |
15 |
atgaatcagagttggacatgaattcaatcgaaaaggaaaacaaacccatagatgaacgaacacctttggttgaaacaacattttacactgtaccttgttc |
114 |
Q |
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| T |
37420943 |
atgaattagagttggacatgaattcaatcgaaaaggaaaacaaacccatagatgaacgaacacctttggttgaaacaacatttttcact--accttgttc |
37421040 |
T |
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| Q |
115 |
gttcctttatggcgatgggagatggatagagcttcgtgatgggtttagtgtgaacgacgctttacgacggaagttctacgccggtgg |
201 |
Q |
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| T |
37421041 |
gttcctttatggcgatgggagatggatagagcttcgtgatgggtttagtgtgaacgacgctttacgacgtaagttctacgccggtgg |
37421127 |
T |
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