View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7841_high_14 (Length: 252)
Name: NF7841_high_14
Description: NF7841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7841_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 49130838 - 49131068
Alignment:
| Q |
1 |
cgagatataggcaccacatttatgcataaatagcaaataatttacagttttttctaatggatatataatttagcatgcatgtaccacttgttcgctaaaa |
100 |
Q |
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| T |
49130838 |
cgagatataggcaccacatttatgcataaatagcaaataatttacagttttttctaatggatatataatttagcat----gtaccacttgttcgctaaaa |
49130933 |
T |
|
| Q |
101 |
attcttgagttcaaaggaattgcaatgaagcgagatttcatgcattccccaatcattgagcttaagaggatggatatatcatatactatgatagtaccaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
49130934 |
attcttgagttcaaaggaattgcaatgaagcgagatttcatgcattccccaatcattgagcttaagaggatggatatatcatatactaagatagtaccaa |
49131033 |
T |
|
| Q |
201 |
gtacagctagaactgcctaccatgacaaacattac |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
49131034 |
gtacagctagaactgcctaccatgacaaacattac |
49131068 |
T |
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