View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7841_low_30 (Length: 203)
Name: NF7841_low_30
Description: NF7841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7841_low_30 |
 | |
|
| [»] chr7 (7 HSPs) |
| |
|
| [»] chr4 (2 HSPs) |
| |
|
| [»] chr2 (3 HSPs) |
| |
|
| [»] chr1 (3 HSPs) |
| |
|
| [»] chr6 (2 HSPs) |
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| [»] chr8 (3 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 175; Significance: 2e-94; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 23110119 - 23109917
Alignment:
| Q |
1 |
caagagtagagttcctccccaaccgagccaaaaaatctgcacatatattgccttcaaggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
23110119 |
caagagtagagttcctccccaacctagccaaaaagtctgcacatacattgccttcacggagcacatgtttgaacaccaaacctaggagatgatccaacaa |
23110020 |
T |
|
| Q |
101 |
acttgttattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagcctgcctcacactca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
23110019 |
acttgttattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagtctgtctcacactca |
23109920 |
T |
|
| Q |
201 |
aca |
203 |
Q |
| |
|
||| |
|
|
| T |
23109919 |
aca |
23109917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 47195187 - 47194985
Alignment:
| Q |
1 |
caagagtagagttcctccccaaccgagccaaaaaatctgcacatatattgccttcaaggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
100 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47195187 |
caagagtagagttcctccccaatctagccaaaaagtctgcacatacattgccttcacggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
47195088 |
T |
|
| Q |
101 |
acttgttattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagcctgcctcacactca |
200 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||| |
|
|
| T |
47195087 |
acttgttattttagctagtaaagaagcgtaagcatggaatgagtgagattgtctgtccataagtaagtttatgatctcagtggagtctgtctcacactca |
47194988 |
T |
|
| Q |
201 |
aca |
203 |
Q |
| |
|
||| |
|
|
| T |
47194987 |
aca |
47194985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 31076772 - 31076570
Alignment:
| Q |
1 |
caagagtagagttcctccccaaccgagccaaaaaatctgcacatatattgccttcaaggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||| |||||||||| |||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
31076772 |
caagagtagagttcctccccaacctatccaaaaagtctgcacatacattgccttcacggagcacatgtttgaacaccaaacatggaagatgatccaacaa |
31076673 |
T |
|
| Q |
101 |
acttgttattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagcctgcctcacactca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
31076672 |
acttgttattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagtttgtctcacactca |
31076573 |
T |
|
| Q |
201 |
aca |
203 |
Q |
| |
|
||| |
|
|
| T |
31076572 |
aca |
31076570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 19916111 - 19915980
Alignment:
| Q |
1 |
caagagtagagttcctccccaaccgagccaaaaaatctgcacatatattgccttcaaggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
100 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
19916111 |
caagagtagagttccttcccaacctagccaaaaaatccgcacatacattgccttcatagagcacatgtttgaacaccaaacctgagagatgatccaacaa |
19916012 |
T |
|
| Q |
101 |
acttgttattttagctagtaaagaagcataag |
132 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| |
|
|
| T |
19916011 |
acttgtgattttagctagtaaagaagcataag |
19915980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 44083454 - 44083551
Alignment:
| Q |
62 |
cacatgtttgaacaccaaacctgggagatgatccaacaaacttgttattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtcca |
159 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
44083454 |
cacatgtttgaacaccaaacctggaatatgatccaacaaacttgttattttatctaataaagaaacataagcatggaatgagtgagattgtctgtcca |
44083551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 19915985 - 19915940
Alignment:
| Q |
158 |
cataagtaggtttatgatctcagtggagcctgcctcacactcaaca |
203 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
19915985 |
cataagtaggtttatgatctcagtggagtctgtctcacactcaaca |
19915940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44083405 - 44083449
Alignment:
| Q |
1 |
caagagtagagttcctccccaaccgagccaaaaaatctgcacata |
45 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||| |||||||||| |
|
|
| T |
44083405 |
caagagtagagttcctccctaacctagccaaaaagtctgcacata |
44083449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 175; Significance: 2e-94; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 49349270 - 49349068
Alignment:
| Q |
1 |
caagagtagagttcctccccaaccgagccaaaaaatctgcacatatattgccttcaaggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49349270 |
caagagtagagttcctccccaacctagccaaaaaatctacacatacattgccttcacggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
49349171 |
T |
|
| Q |
101 |
acttgttattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagcctgcctcacactca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||| |
|
|
| T |
49349170 |
acttgttattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttttgatctcagtggagtctgtctcacactca |
49349071 |
T |
|
| Q |
201 |
aca |
203 |
Q |
| |
|
||| |
|
|
| T |
49349070 |
aca |
49349068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 1807699 - 1807899
Alignment:
| Q |
1 |
caagagtagagttcctccccaaccgagccaaaaaatctgcacatatattgccttcaaggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1807699 |
caagagtagagttcctccccaacctagccaaaaagtctgcacatacattgccttcacggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
1807798 |
T |
|
| Q |
101 |
acttgttattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagcctgcctcacactca |
200 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
1807799 |
acttgttattttagctagtagagaagcataagtatgaaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagtctgtctcacactca |
1807898 |
T |
|
| Q |
201 |
a |
201 |
Q |
| |
|
| |
|
|
| T |
1807899 |
a |
1807899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 171; Significance: 5e-92; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 6756857 - 6756655
Alignment:
| Q |
1 |
caagagtagagttcctccccaaccgagccaaaaaatctgcacatatattgccttcaaggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
100 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6756857 |
caagagtagagtttctccccaacctagccaaaaagtctgcacatacattgccttcacggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
6756758 |
T |
|
| Q |
101 |
acttgttattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagcctgcctcacactca |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
6756757 |
acttgttattttagttagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagtctgtctcacactca |
6756658 |
T |
|
| Q |
201 |
aca |
203 |
Q |
| |
|
||| |
|
|
| T |
6756657 |
aca |
6756655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21812808 - 21812606
Alignment:
| Q |
1 |
caagagtagagttcctccccaaccgagccaaaaaatctgcacatatattgccttcaaggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
21812808 |
caagagtagagttcctccccaacctagccaaaaagtctgcacatacattgtcttcacggagcacatgtttgaacaccaaacttgggagatgatccaacaa |
21812709 |
T |
|
| Q |
101 |
acttgttattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagcctgcctcacactca |
200 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
21812708 |
acttattattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagtctgtctcacactca |
21812609 |
T |
|
| Q |
201 |
aca |
203 |
Q |
| |
|
||| |
|
|
| T |
21812608 |
aca |
21812606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 7126262 - 7126069
Alignment:
| Q |
1 |
caagagtagagttcctccccaaccgagccaaaaaatctgcacatatattgccttcaaggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
100 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||| |||||||||| |||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
7126262 |
caagagtagagttcctctccaacctagccaaaaagtctgcacatacattgccttcacagagcacatgtttgaacaca--------gagatgatccaacaa |
7126171 |
T |
|
| Q |
101 |
acttgttattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagcctgcctcacactca |
200 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
7126170 |
acttgtgattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggag-ttgtctcacactca |
7126072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 171; Significance: 5e-92; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 27525626 - 27525424
Alignment:
| Q |
1 |
caagagtagagttcctccccaaccgagccaaaaaatctgcacatatattgccttcaaggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
27525626 |
caagagtagagttcctccccaacctagccaaaaagtctgcacatacattgccttcacggagcacatgtttgaacaccaaacttgggagatgatccaacaa |
27525527 |
T |
|
| Q |
101 |
acttgttattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagcctgcctcacactca |
200 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
27525526 |
acttgttattttagctattaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagtctgtctcacactca |
27525427 |
T |
|
| Q |
201 |
aca |
203 |
Q |
| |
|
||| |
|
|
| T |
27525426 |
aca |
27525424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 24136112 - 24136314
Alignment:
| Q |
1 |
caagagtagagttcctccccaaccgagccaaaaaatctgcacatatattgccttcaaggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
100 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| | |||| ||||||||||| |
|
|
| T |
24136112 |
caagagtagagttccttcccaacctagccaaaaaatctgcacatacattgccttcacggagcacatgtttgaacaccaaacttaggaggtgatccaacaa |
24136211 |
T |
|
| Q |
101 |
acttgttattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagcctgcctcacactca |
200 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| ||||||||| | ||||||||| ||||||||| |||||||||||| || |||||||||| |
|
|
| T |
24136212 |
acttgtgattttagctagtaaagaagcataagcatggaagaagtgagattatatgtccataaataggtttataatctcagtggagtatgtctcacactca |
24136311 |
T |
|
| Q |
201 |
aca |
203 |
Q |
| |
|
||| |
|
|
| T |
24136312 |
aca |
24136314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 37 - 203
Target Start/End: Original strand, 45951543 - 45951709
Alignment:
| Q |
37 |
ctgcacatatattgccttcaaggagcacatgtttgaacaccaaacctgggagatgatccaacaaacttgttattttagctagtaaagaagcataagcatg |
136 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
45951543 |
ctgcacatatattgccttcacggagcacatatttgaacgccaaacctgggagatgatctaacaaacttgtgattttagctagtaaagaagcataagcatg |
45951642 |
T |
|
| Q |
137 |
gaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagcctgcctcacactcaaca |
203 |
Q |
| |
|
||| |||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
45951643 |
gaaggagtgagattgtgtgtccataagtaggtttatgatctcagtggagtctgtctcacactcaaca |
45951709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 168; Significance: 3e-90; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 34551364 - 34551567
Alignment:
| Q |
1 |
caagagtagagttcctccccaaccgagccaaaaaatctgcacatatattgccttcaaggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
34551364 |
caagagtagagttcctccccaacctagccaaaaagtctgcacatacattgccttcacggagcacatgtttgaacatcaaacctgggagatgatccaacaa |
34551463 |
T |
|
| Q |
101 |
acttgttattttagctagtaaag-aagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagcctgcctcacactc |
199 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
34551464 |
acttgttattttagctagtaaagaaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagtctgtctcacactc |
34551563 |
T |
|
| Q |
200 |
aaca |
203 |
Q |
| |
|
|||| |
|
|
| T |
34551564 |
aaca |
34551567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 26881258 - 26881055
Alignment:
| Q |
1 |
caagagtagagttcctccccaaccgagccaaaaaatctgcacatatattgcctt-caaggagcacatgtttgaacaccaaacctgggagatgatccaaca |
99 |
Q |
| |
|
|||||||||||||||| ||||||| || |||||||||| |||||| |||||||| || |||| |||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
26881258 |
caagagtagagttccttcccaacctagtcaaaaaatctacacatacattgcctttcatggagtacatgtttgaacaccaaacctgcgagatgatctaaca |
26881159 |
T |
|
| Q |
100 |
aacttgttattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagcctgcctcacactc |
199 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||| || ||||||||| |
|
|
| T |
26881158 |
aacttgtgattttagctagtaaagaagtataagcatggaaggagtgagattgtccgtcaataagtaggttaatgatctcagtggagtctatctcacactc |
26881059 |
T |
|
| Q |
200 |
aaca |
203 |
Q |
| |
|
|||| |
|
|
| T |
26881058 |
aaca |
26881055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 140; Significance: 2e-73; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 41012173 - 41011973
Alignment:
| Q |
1 |
caagagtagagttcctccccaaccgagccaaaaaatctgcacatatattgccttcaaggagcacatgtttgaacaccaaacctgggagatgatccaacaa |
100 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||| | |||| ||| |||||||||| ||||||| ||||||||| |||||||||||||||||| ||||| |
|
|
| T |
41012173 |
caagagaagagttcctccccaacctagccaaaaagtatgcatatacattgccttcacggagcac--gtttgaacaacaaacctgggagatgatctaacaa |
41012076 |
T |
|
| Q |
101 |
acttgttattttagctagtaaagaagcataagcatggaatgagtgagattgtctgtccataagtaggtttatgatctcagtggagcctgcctcacactca |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
41012075 |
acttgttattttagctaataaagaagcataagcatggaatgagtgagattgtctatccataagtaggtttatgatctcagtggagtctgtctcacactca |
41011976 |
T |
|
| Q |
201 |
aca |
203 |
Q |
| |
|
||| |
|
|
| T |
41011975 |
aca |
41011973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 9532060 - 9532145
Alignment:
| Q |
26 |
agccaaaaaatctgcacatatattgccttcaaggagcacatgtttgaacaccaaacctgggagatgatccaacaaacttgttattt |
111 |
Q |
| |
|
||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
9532060 |
agccaaaaagtctgcacatacattgccttcacggagcacatgtttgaacaccaaacctggaagatgatccaacaaacttgttattt |
9532145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 5372923 - 5373007
Alignment:
| Q |
1 |
caagagtagagttcctccccaaccgagccaaaaaatctgcacatatattgccttcaaggagcacatgtttgaacaccaaacctgg |
85 |
Q |
| |
|
|||||||| ||||||||||||||| | |||||| |||||||||| ||| |||||| ||||||||||||||||||||||| |||| |
|
|
| T |
5372923 |
caagagtatagttcctccccaacctaatcaaaaagtctgcacatacattaccttcacggagcacatgtttgaacaccaaatctgg |
5373007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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