View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7842_low_3 (Length: 479)

Name: NF7842_low_3
Description: NF7842
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7842_low_3
NF7842_low_3
[»] chr3 (15 HSPs)
chr3 (16-462)||(5501450-5501893)
chr3 (20-429)||(5524344-5524753)
chr3 (16-268)||(5488794-5489046)
chr3 (24-258)||(5483354-5483588)
chr3 (32-242)||(5855258-5855468)
chr3 (32-243)||(5803679-5803890)
chr3 (24-242)||(5453624-5453842)
chr3 (39-241)||(20342361-20342563)
chr3 (24-242)||(5829354-5829572)
chr3 (32-302)||(5850107-5850373)
chr3 (24-242)||(5445041-5445259)
chr3 (302-454)||(5488655-5488804)
chr3 (390-462)||(5483255-5483327)
chr3 (52-174)||(1077294-1077416)
chr3 (74-174)||(1107547-1107647)
[»] chr6 (1 HSPs)
chr6 (24-242)||(25810553-25810771)
[»] chr5 (1 HSPs)
chr5 (55-174)||(22689353-22689472)
[»] chr8 (1 HSPs)
chr8 (47-180)||(4150885-4151018)
[»] chr7 (1 HSPs)
chr7 (44-132)||(20303598-20303686)
[»] scaffold0090 (1 HSPs)
scaffold0090 (52-121)||(8349-8418)


Alignment Details
Target: chr3 (Bit Score: 397; Significance: 0; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 16 - 462
Target Start/End: Complemental strand, 5501893 - 5501450
Alignment:
Q  16 attgctaaattggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5501893 attgctaaattggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagat 5501794  T
Q  116 atgaaaacaagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagcagaggctaata 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5501793 atgaaaacaagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagcagaggctaata 5501694  T
Q  216 caaatagattgatcggatcatagtaatatctaacttatatttatttcaattttaaagcttaaatgactttttagtctttgaaatatatttcagttttcgt 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  5501693 caaatagattgatcggatcatagtaatatctaacttatatttatttcaattttaaggcttaaatgactttttcgtctttgaaatatatttcagttttcgt 5501594  T
Q  316 ttctattaaagatttttatcagtttgtattcctaaactagaggaaagataattttttatcctcgttataatttcggttttagactttgataataattgtt 415  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||  | |||||||||||||   |||| ||||||||||||||||||||||||||    
T  5501593 ttctattaaagatttttatcagtttgtattcctaaaatacaggaaagattgtcttttatcctcgtt---attttggttttagactttgataataattgtt 5501497  T
Q  416 catattggagtattagtccatagagtagagactatacatggactatg 462  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  5501496 catattggagtattagtccatagagtagatactatacatggactatg 5501450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 20 - 429
Target Start/End: Complemental strand, 5524753 - 5524344
Alignment:
Q  20 ctaaattggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatga 119  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| | |    
T  5524753 ctaaattggaataagcgcctggaaattattaatggaattgctcgagggctgctatatcttcatcaagattctacacaaagaatcatacatagagatctca 5524654  T
Q  120 aaacaagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagcagaggctaatacaaa 219  Q
    | |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5524653 agacaagcaatattcttcttgatattgatatgatcccaaagatatcagattttggtttagccagatcatttatgggagacgaagccgaggctaatacaaa 5524554  T
Q  220 tagattgatcggatcatagtaatatctaacttatatttatttcaattttaaagcttaaatgactttttagtctttgaaatat------atttcagttttc 313  Q
    |||| |||| ||||||||||||||||||||||| || |||||  | ||||| |||||||| | |||||| |||||| |||||      ||||| ||||||    
T  5524553 tagagtgatgggatcatagtaatatctaacttacatatattt--aatttaaggcttaaat-aatttttactctttgtaatatacattgatttcggttttc 5524457  T
Q  314 gtttctattaaagatttttatcagtttgtattcctaaactagaggaaagataattttttatcctcgttataatttcggttttagactttgataataattg 413  Q
     ||||||| ||||||||||||||||||| ||||||||| || |||||||||  |||||| |||||   || ||||  ||||||  |||||||||||||||    
T  5524456 atttctataaaagatttttatcagtttgaattcctaaaatacaggaaagattgttttttgtcctc---attatttttgttttaatctttgataataattg 5524360  T
Q  414 ttcatattggagtatt 429  Q
    ||||||||||||||||    
T  5524359 ttcatattggagtatt 5524344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 16 - 268
Target Start/End: Complemental strand, 5489046 - 5488794
Alignment:
Q  16 attgctaaattggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagat 115  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5489046 attgctaaattggattaagcgtctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagat 5488947  T
Q  116 atgaaaacaagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagcagaggctaata 215  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5488946 atgaaaacaagcaatattcttcttgatgttgatatgatcccaaagatagcagactttggtttagccagatcatttatgggagacgaagcagaggctaata 5488847  T
Q  216 caaatagattgatcggatcatagtaatatctaacttatatttatttcaatttt 268  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||| ||||    
T  5488846 caaatagattgatcggatcatagtaatatctaacttacattgatttcagtttt 5488794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 24 - 258
Target Start/End: Complemental strand, 5483588 - 5483354
Alignment:
Q  24 attggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaac 123  Q
    |||||| ||||||| ||||||||||||| || |||||||| |||||| ||||||| ||||| ||||||||| |||||||||||||||||||| | || ||    
T  5483588 attggactaagcgcttggaaattattgacgggattgctcgggggctgctgtatctccatcaggattctacattaagaatcatacatagagatctcaagac 5483489  T
Q  124 aagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagcagaggctaatacaaataga 223  Q
    ||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5483488 aagcaatattcttcttgatgttgatatgatcccaaagatatcagattttggtttagccagatcatttatgggagacgaagccgaggctaatacaaataga 5483389  T
Q  224 ttgatcggatcatagtaatatctaacttatattta 258  Q
     |||| ||| |||||||||||||||| ||||||||    
T  5483388 gtgatgggaacatagtaatatctaacctatattta 5483354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 32 - 242
Target Start/End: Original strand, 5855258 - 5855468
Alignment:
Q  32 aagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaata 131  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||| | || ||||||||||    
T  5855258 aagcgcttggaaattattgatgggattgctcgtgggctgttgtatctgcatcaagattctacactaagaataatacatagagatctcaagacaagcaata 5855357  T
Q  132 ttcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagcagaggctaatacaaatagattgatcgg 231  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||| |||| ||    
T  5855358 ttcttcttgatattgatatgatcccaaagatatcagattttggtttagccagatcatttatgggagaccaagctgaggcgaatacaaatagagtgatggg 5855457  T
Q  232 atcatagtaat 242  Q
    | |||||||||    
T  5855458 aacatagtaat 5855468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 32 - 243
Target Start/End: Original strand, 5803679 - 5803890
Alignment:
Q  32 aagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaata 131  Q
    |||||| |||||||||||||||| ||| |||| |||||| | ||||| ||||| |||||||||||||||||||||||||||||| | || ||||||||||    
T  5803679 aagcgcttggaaattattgatgggatttctcgggggctgctatatctgcatcaggattctacactaagaatcatacatagagatctcaagacaagcaata 5803778  T
Q  132 ttcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagcagaggctaatacaaatagattgatcgg 231  Q
    | |||||||||||||||||||| ||||||||| | |||||||| |||||||||||||||||||||||| |||| |||||||||||||||||| |||| ||    
T  5803779 tacttcttgatattgatatgatcccaaagatatccgattttggattagccagatcatttatgggagaccaagcggaggctaatacaaatagagtgatggg 5803878  T
Q  232 atcatagtaata 243  Q
    | ||||||||||    
T  5803879 aacatagtaata 5803890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 24 - 242
Target Start/End: Complemental strand, 5453842 - 5453624
Alignment:
Q  24 attggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaac 123  Q
    |||||| ||||||  ||||||||||||| || |||||||| |||||||||||||| ||||| ||||||||| |||||||||| ||||||||| | || ||    
T  5453842 attggactaagcgtttggaaattattgacggtattgctcgggggctgttgtatctccatcaggattctacattaagaatcattcatagagatctcaagac 5453743  T
Q  124 aagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagcagaggctaatacaaataga 223  Q
    |||||||||||||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  5453742 aagcaatattcttcttgatattcatatgatcccaaagatatccgattttggtttagccagatcatttatgggagaccaagctgaggctaatacaaataga 5453643  T
Q  224 ttgatcggatcatagtaat 242  Q
     |||| ||| | |||||||    
T  5453642 gtgatgggaacttagtaat 5453624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 39 - 241
Target Start/End: Complemental strand, 20342563 - 20342361
Alignment:
Q  39 tggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaatattcttct 138  Q
    ||||||||||| |||| |||||||| |||||  ||||||| |||||||||||||||||| ||||||||||||||||| | || |||||||| ||||||||    
T  20342563 tggaaattattaatggtattgctcgggggcttctgtatctccatcaagattctacactacgaatcatacatagagatctcaagacaagcaacattcttct 20342464  T
Q  139 tgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagcagaggctaatacaaatagattgatcggatcatag 238  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||| ||| | |||    
T  20342463 tgatattgatatgatcccaaagatatcagattttggtttagccagatcatttatgggagaccaagccgaggctaatacaaatagagtgatgggaacctag 20342364  T
Q  239 taa 241  Q
    |||    
T  20342363 taa 20342361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 24 - 242
Target Start/End: Original strand, 5829354 - 5829572
Alignment:
Q  24 attggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaac 123  Q
    |||||| ||||||| |||||||||||||||| |||||||| |||||| | ||||| ||||||||||| ||| | || ||||||||||||||| | || ||    
T  5829354 attggactaagcgcttggaaattattgatggtattgctcgtgggctgctttatctccatcaagattcaacattgaggatcatacatagagatctcaagac 5829453  T
Q  124 aagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagcagaggctaatacaaataga 223  Q
    ||||||||| |||||||||||||||||||| ||||||||| | |||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||    
T  5829454 aagcaatatacttcttgatattgatatgatcccaaagatatcggattttggcttagccagatcatttatgggagaccaagccgaggctaatacaaataga 5829553  T
Q  224 ttgatcggatcatagtaat 242  Q
     |||| ||| |||||||||    
T  5829554 gtgatgggaacatagtaat 5829572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 32 - 302
Target Start/End: Original strand, 5850107 - 5850373
Alignment:
Q  32 aagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaata 131  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||||| ||||| ||||||||| |||||||||||||||||||| | || || |||||||    
T  5850107 aagcgcttggaaattattgatgggattgctcgagggctgctgtatctccatcaggattctacattaagaatcatacatagagatctcaagaccagcaata 5850206  T
Q  132 ttcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagcagaggctaatacaaatagattgatcgg 231  Q
    | |||||||||||||||||||| || |||||| | |||||||| |||||||||||||||| ||||||| |||| |||||||| ||||||||| | || ||    
T  5850207 tacttcttgatattgatatgatccctaagatatccgattttggattagccagatcatttacgggagaccaagctgaggctaagacaaatagagtcatggg 5850306  T
Q  232 atcatagtaatatctaacttatatttatttcaattttaaagcttaaatgactttttagtctttgaaatata 302  Q
    | ||||||||| || |   | |||||||||| | ||||  |||||||| ||| ||||||||||| ||||||    
T  5850307 aacatagtaatttcga---tttatttatttcga-tttatggcttaaataactctttagtctttgtaatata 5850373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 24 - 242
Target Start/End: Complemental strand, 5445259 - 5445041
Alignment:
Q  24 attggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaac 123  Q
    |||||| ||||||  |||||||||||||||| |||||||| |||||| ||||||| ||||| ||||||||| |||||||||| ||||||||| | || ||    
T  5445259 attggactaagcgtttggaaattattgatggtattgctcgggggctgctgtatctccatcaggattctacattaagaatcattcatagagatctcaagac 5445160  T
Q  124 aagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagcagaggctaatacaaataga 223  Q
    |||||||||||||||||||||||||||||| ||||||||| | ||||| ||||||| ||||||||| || |||||  |||| ||||||||||||||||||    
T  5445159 aagcaatattcttcttgatattgatatgatcccaaagatatccgatttcggtttagtcagatcattcattggagagcaagctgaggctaatacaaataga 5445060  T
Q  224 ttgatcggatcatagtaat 242  Q
     |||| ||| |||||||||    
T  5445059 gtgatgggaacatagtaat 5445041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 302 - 454
Target Start/End: Complemental strand, 5488804 - 5488655
Alignment:
Q  302 atttcagttttcgtttctattaaagatttttatcagtttgtattcctaaactagaggaaagataattttttatcctcgttataatttcggttttagactt 401  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||  ||||||||||||   || |||| |||||||| |||    
T  5488804 atttcagttttcgtttctattaaagatttgtatcagtttgtattcctaaaatacaggaaagattgttttttatcctc---attattttggttttagtctt 5488708  T
Q  402 tgataataattgttcatattggagtattagtccatagagtagagactatacat 454  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  5488707 tgataataattgttcatattggagtattagtccatagagtggacactatacat 5488655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 5483327 - 5483255
Alignment:
Q  390 ggttttagactttgataataattgttcatattggagtattagtccatagagtagagactatacatggactatg 462  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |||||||    
T  5483327 ggttttagtctttgataataatttttcatattggagtattagtccatagaatatagactatacatagactatg 5483255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 1077294 - 1077416
Alignment:
Q  52 tggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaatattcttcttgatattgatatg 151  Q
    ||||||||| || || ||| | ||||||||||||||||||| | | || ||||||||| ||||| | ||| |||| |||||| |  | || | |||||||    
T  1077294 tggaattgcccgtggactgatttatcttcatcaagattctagattgaggatcatacatcgagatctaaaaccaagtaatattttattagacaatgatatg 1077393  T
Q  152 attccaaagatagcagattttgg 174  Q
    | |||||| ||| ||||||||||    
T  1077394 aatccaaaaatatcagattttgg 1077416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 1107547 - 1107647
Alignment:
Q  74 tatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaatattcttcttgatattgatatgattccaaagatagcagattttg 173  Q
    ||||||||||||||||||| | | || ||||||||||||||| | ||| |||| || ||| | || |||| ||||||||  || || ||| |||||||||    
T  1107547 tatcttcatcaagattctagattgaggatcatacatagagatctaaaaccaagtaacattttgctagataatgatatgaacccgaaaatatcagattttg 1107646  T
Q  174 g 174  Q
    |    
T  1107647 g 1107647  T

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Target: chr6 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 24 - 242
Target Start/End: Original strand, 25810553 - 25810771
Alignment:
Q  24 attggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaac 123  Q
    |||||| ||||||  ||||||||||||| || |||||||| |||||||||||||| ||||| ||||||||| |||||||||| ||||||||| | || ||    
T  25810553 attggactaagcgtttggaaattattgacggtattgctcgggggctgttgtatctccatcaggattctacattaagaatcattcatagagatctcaagac 25810652  T
Q  124 aagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagcagaggctaatacaaataga 223  Q
    |||||||||||||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  25810653 aagcaatattcttcttgatattcatatgatcccaaagatatccgattttggtttagccagatcatttatgggagaccaagctgaggctaatacaaataga 25810752  T
Q  224 ttgatcggatcatagtaat 242  Q
     |||| ||| | |||||||    
T  25810753 gtgatgggaacttagtaat 25810771  T

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Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 22689472 - 22689353
Alignment:
Q  55 aattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaatattcttcttgatattgatatgatt 154  Q
    |||||||||||| ||  | ||||||||||||||||||| | |||||||||||||||| ||| | ||  ||||||||||| |  | || | |||||||| |    
T  22689472 aattgctcgaggacttctttatcttcatcaagattctatattaagaatcatacatagggatctaaaggcaagcaatattttagtagacaatgatatgaat 22689373  T
Q  155 ccaaagatagcagattttgg 174  Q
    ||||||||  ||||||||||    
T  22689372 ccaaagatttcagattttgg 22689353  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 4151018 - 4150885
Alignment:
Q  47 attgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaatattcttcttgatattg 146  Q
    ||||| ||||| ||||||||  |  |||||||||||  ||| || | |||||| ||||||||||||||| | ||| ||||||| ||  | ||||||| ||    
T  4151018 attgaaggaatagctcgaggtataatgtatcttcatagagactcgagactaaggatcatacatagagatctaaaagcaagcaacatcttacttgatagtg 4150919  T
Q  147 atatgattccaaagatagcagattttggtttagc 180  Q
    | ||||||||||| ||| |||| || ||||||||    
T  4150918 acatgattccaaaaatatcagacttcggtttagc 4150885  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 20303598 - 20303686
Alignment:
Q  44 attattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaatat 132  Q
    ||||| || ||||||||||||||  |||||||||||||   |||||| | ||||||||| ||||| |||||| |||| ||||| |||||    
T  20303598 attatagaaggaattgctcgaggattgttgtatcttcacagagattcgagactaagaattatacacagagatttgaagacaagtaatat 20303686  T

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Target: scaffold0090 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 8418 - 8349
Alignment:
Q  52 tggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaa 121  Q
    |||||||||||| |||||  | ||||||||||||||||| | | || |||||||||| |||||| |||||    
T  8418 tggaattgctcgggggcttctttatcttcatcaagattcaagattacgaatcatacacagagatctgaaa 8349  T

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