View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7843_low_17 (Length: 202)
Name: NF7843_low_17
Description: NF7843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7843_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 183; Significance: 3e-99; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 183; E-Value: 3e-99
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 27774878 - 27775064
Alignment:
| Q |
1 |
gaaaaatatcttagagtagatgcaaatgttataatttgtagtaaaaaacaacaatagcatgtctgtttgatataattgaaaacaaagaagataaacaaca |
100 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27774878 |
gaaaaatatcttagagtagatgcaaatgttatcatttgtagtaaaaaacaacaatagcatgtctgtttgatataattgaaaacaaagaagataaacaaca |
27774977 |
T |
|
| Q |
101 |
gccgtagttatcctggtggttggaaaataaagatgtattctaaatttaacatgtcaaaagataaaaatgtaaaagataaatgatgtc |
187 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27774978 |
gccgtagttatcctggtggttggaaaataaagatgtattctaaatttaacatgtcaaaagataaaaatgtaaaagataaatgatgtc |
27775064 |
T |
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