View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7844_low_10 (Length: 302)

Name: NF7844_low_10
Description: NF7844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7844_low_10
NF7844_low_10
[»] chr7 (57 HSPs)
chr7 (61-173)||(22296877-22296989)
chr7 (205-291)||(1741956-1742042)
chr7 (238-291)||(2297036-2297089)
chr7 (238-291)||(22297994-22298047)
chr7 (238-291)||(42880034-42880087)
chr7 (238-291)||(45948730-45948783)
chr7 (239-291)||(10599212-10599264)
chr7 (238-288)||(27935765-27935815)
chr7 (245-291)||(27947601-27947647)
chr7 (238-291)||(715963-716016)
chr7 (238-291)||(12977786-12977839)
chr7 (238-291)||(19105101-19105154)
chr7 (238-291)||(34274792-34274845)
chr7 (238-291)||(37490782-37490835)
chr7 (240-288)||(40927163-40927211)
chr7 (238-290)||(48843550-48843602)
chr7 (242-289)||(18270579-18270626)
chr7 (238-289)||(18292333-18292384)
chr7 (238-291)||(13405227-13405280)
chr7 (238-291)||(24680126-24680179)
chr7 (242-291)||(37502321-37502370)
chr7 (238-291)||(44567141-44567194)
chr7 (238-286)||(40339457-40339505)
chr7 (243-291)||(48684726-48684774)
chr7 (245-291)||(10476141-10476187)
chr7 (206-289)||(21752213-21752296)
chr7 (238-288)||(24780409-24780459)
chr7 (238-280)||(45933695-45933737)
chr7 (238-287)||(6747225-6747274)
chr7 (238-291)||(8603973-8604026)
chr7 (246-291)||(29531035-29531080)
chr7 (238-291)||(31418613-31418666)
chr7 (238-291)||(42285906-42285959)
chr7 (246-286)||(44453141-44453181)
chr7 (14-53)||(22296803-22296842)
chr7 (252-291)||(25440884-25440923)
chr7 (244-291)||(28289219-28289266)
chr7 (238-285)||(32501855-32501902)
chr7 (238-288)||(1031153-1031203)
chr7 (245-291)||(30312463-30312509)
chr7 (238-288)||(35777817-35777867)
chr7 (245-291)||(40753528-40753574)
chr7 (238-291)||(23935420-23935473)
chr7 (238-291)||(24133230-24133283)
chr7 (238-291)||(33939834-33939887)
chr7 (238-291)||(37815722-37815775)
chr7 (245-290)||(39557327-39557372)
chr7 (238-291)||(41137726-41137779)
chr7 (238-283)||(42753706-42753751)
chr7 (238-291)||(45499927-45499980)
chr7 (245-291)||(6563514-6563560)
chr7 (243-285)||(29636333-29636375)
chr7 (245-291)||(31929960-31930006)
chr7 (238-288)||(34012159-34012209)
chr7 (238-287)||(8334376-8334425)
chr7 (238-291)||(36807933-36807986)
chr7 (238-282)||(21819282-21819326)
[»] chr8 (38 HSPs)
chr8 (238-297)||(39765955-39766014)
chr8 (238-291)||(6374412-6374465)
chr8 (205-291)||(39698768-39698854)
chr8 (238-291)||(40228572-40228625)
chr8 (205-291)||(4989443-4989529)
chr8 (238-291)||(15160548-15160601)
chr8 (238-291)||(17920954-17921007)
chr8 (238-291)||(39463257-39463310)
chr8 (238-291)||(40362433-40362486)
chr8 (198-291)||(43084729-43084821)
chr8 (238-291)||(31693723-31693776)
chr8 (238-288)||(43448714-43448764)
chr8 (241-291)||(43974893-43974943)
chr8 (238-291)||(6116107-6116160)
chr8 (238-291)||(7839456-7839509)
chr8 (205-291)||(9880603-9880689)
chr8 (238-291)||(29025848-29025901)
chr8 (238-293)||(43724379-43724434)
chr8 (245-291)||(514879-514925)
chr8 (238-288)||(9812171-9812221)
chr8 (241-291)||(35356308-35356358)
chr8 (238-291)||(9304735-9304788)
chr8 (238-291)||(15227565-15227618)
chr8 (238-291)||(17655906-17655958)
chr8 (238-291)||(37559635-37559688)
chr8 (238-291)||(45358996-45359049)
chr8 (245-292)||(43561344-43561390)
chr8 (238-291)||(396315-396369)
chr8 (245-291)||(36921362-36921408)
chr8 (238-288)||(44713532-44713582)
chr8 (238-291)||(4760660-4760713)
chr8 (238-291)||(19438234-19438287)
chr8 (243-291)||(5295508-5295556)
chr8 (245-283)||(29312303-29312341)
chr8 (248-285)||(31234047-31234084)
chr8 (246-291)||(31899350-31899395)
chr8 (238-291)||(34796780-34796833)
chr8 (259-291)||(41679338-41679370)
[»] scaffold0332 (1 HSPs)
scaffold0332 (238-291)||(3912-3965)
[»] chr3 (51 HSPs)
chr3 (238-291)||(3152905-3152958)
chr3 (205-291)||(38016340-38016426)
chr3 (204-291)||(30431084-30431171)
chr3 (205-291)||(32492280-32492364)
chr3 (238-291)||(50038270-50038323)
chr3 (239-291)||(36460805-36460857)
chr3 (238-291)||(2458005-2458058)
chr3 (238-291)||(19115385-19115438)
chr3 (238-291)||(30426423-30426476)
chr3 (238-291)||(42571628-42571681)
chr3 (238-291)||(44676219-44676272)
chr3 (238-291)||(47895443-47895496)
chr3 (238-291)||(48901718-48901771)
chr3 (238-291)||(48903284-48903337)
chr3 (238-291)||(50646209-50646262)
chr3 (238-291)||(53200779-53200832)
chr3 (205-291)||(45213821-45213906)
chr3 (245-291)||(9189534-9189580)
chr3 (205-291)||(23208390-23208474)
chr3 (205-291)||(39356849-39356936)
chr3 (238-291)||(30315307-30315360)
chr3 (238-291)||(36844841-36844894)
chr3 (239-288)||(38140949-38140998)
chr3 (238-291)||(51398008-51398061)
chr3 (243-291)||(36729909-36729957)
chr3 (240-288)||(38363785-38363833)
chr3 (238-288)||(19373584-19373634)
chr3 (238-288)||(33194133-33194183)
chr3 (238-288)||(47137961-47138011)
chr3 (238-291)||(4392194-4392247)
chr3 (238-291)||(4758989-4759042)
chr3 (238-291)||(11019925-11019978)
chr3 (238-291)||(11393543-11393596)
chr3 (238-291)||(22857088-22857141)
chr3 (238-291)||(41850388-41850441)
chr3 (238-291)||(42886749-42886802)
chr3 (246-291)||(52654310-52654355)
chr3 (239-291)||(7230995-7231047)
chr3 (245-291)||(33024399-33024445)
chr3 (241-291)||(40487829-40487879)
chr3 (238-291)||(42071983-42072036)
chr3 (238-291)||(50088415-50088468)
chr3 (239-289)||(8817139-8817189)
chr3 (238-291)||(41287595-41287651)
chr3 (238-291)||(31583533-31583586)
chr3 (238-291)||(31853661-31853714)
chr3 (238-291)||(35557857-35557910)
chr3 (238-275)||(42939967-42940004)
chr3 (238-291)||(47823550-47823603)
chr3 (238-275)||(51058267-51058304)
chr3 (238-286)||(51324143-51324191)
[»] chr4 (58 HSPs)
chr4 (204-291)||(19878612-19878699)
chr4 (238-291)||(4505335-4505388)
chr4 (238-291)||(19451317-19451370)
chr4 (238-291)||(20448037-20448090)
chr4 (238-291)||(52957896-52957949)
chr4 (206-291)||(1819528-1819613)
chr4 (238-288)||(49089462-49089512)
chr4 (238-291)||(37624554-37624607)
chr4 (238-291)||(40345453-40345506)
chr4 (238-291)||(45043694-45043747)
chr4 (238-291)||(52253843-52253896)
chr4 (238-291)||(52915648-52915701)
chr4 (243-291)||(39982106-39982154)
chr4 (195-291)||(41496159-41496256)
chr4 (238-285)||(27943658-27943705)
chr4 (238-288)||(40837128-40837178)
chr4 (238-288)||(49080586-49080635)
chr4 (242-291)||(2728504-2728553)
chr4 (238-291)||(10573260-10573313)
chr4 (238-291)||(19930712-19930765)
chr4 (238-291)||(22220465-22220518)
chr4 (238-291)||(25231173-25231226)
chr4 (238-291)||(30261257-30261310)
chr4 (238-291)||(47817736-47817789)
chr4 (238-291)||(51733600-51733653)
chr4 (243-291)||(50621293-50621341)
chr4 (239-291)||(56460082-56460134)
chr4 (245-291)||(6991367-6991413)
chr4 (241-291)||(7906102-7906152)
chr4 (245-291)||(21864489-21864535)
chr4 (245-291)||(21920350-21920396)
chr4 (238-288)||(29519634-29519684)
chr4 (238-291)||(2493100-2493153)
chr4 (238-291)||(24940877-24940930)
chr4 (238-291)||(44571971-44572024)
chr4 (238-291)||(52848160-52848213)
chr4 (206-291)||(37654376-37654460)
chr4 (245-291)||(29370608-29370654)
chr4 (238-288)||(34413656-34413706)
chr4 (238-291)||(50203074-50203125)
chr4 (238-288)||(53814606-53814656)
chr4 (238-291)||(8971040-8971093)
chr4 (238-291)||(41920415-41920468)
chr4 (238-291)||(50623081-50623134)
chr4 (238-291)||(54042289-54042342)
chr4 (238-282)||(28734596-28734640)
chr4 (238-282)||(33033076-33033120)
chr4 (245-288)||(34316227-34316270)
chr4 (238-285)||(40010986-40011033)
chr4 (245-288)||(52162111-52162154)
chr4 (204-291)||(31917920-31918007)
chr4 (245-279)||(44650893-44650927)
chr4 (246-288)||(45839643-45839685)
chr4 (238-291)||(24157183-24157236)
chr4 (238-291)||(44061006-44061059)
chr4 (251-291)||(25123832-25123872)
chr4 (263-291)||(38510351-38510379)
chr4 (238-278)||(55092567-55092607)
[»] chr1 (58 HSPs)
chr1 (238-288)||(15573605-15573655)
chr1 (205-291)||(32807038-32807125)
chr1 (205-288)||(46045938-46046021)
chr1 (238-291)||(26352181-26352234)
chr1 (238-291)||(29567894-29567947)
chr1 (238-291)||(50249308-50249361)
chr1 (241-291)||(10842781-10842831)
chr1 (245-291)||(25487093-25487139)
chr1 (238-291)||(5463573-5463626)
chr1 (238-291)||(15823032-15823085)
chr1 (238-291)||(34032180-34032233)
chr1 (238-291)||(34047335-34047388)
chr1 (205-291)||(38531397-38531483)
chr1 (242-291)||(40717396-40717445)
chr1 (243-291)||(50094232-50094280)
chr1 (238-289)||(48025356-48025407)
chr1 (238-291)||(12591182-12591235)
chr1 (238-291)||(13408365-13408418)
chr1 (238-291)||(16757294-16757347)
chr1 (238-291)||(26755218-26755271)
chr1 (238-291)||(31491870-31491923)
chr1 (238-291)||(35848033-35848086)
chr1 (238-291)||(44258607-44258660)
chr1 (238-291)||(49468811-49468864)
chr1 (239-291)||(26595169-26595221)
chr1 (238-288)||(1740744-1740794)
chr1 (238-288)||(27208987-27209037)
chr1 (245-291)||(27720963-27721009)
chr1 (245-291)||(46286918-46286964)
chr1 (238-291)||(9915441-9915494)
chr1 (246-291)||(14593420-14593465)
chr1 (238-291)||(24483386-24483439)
chr1 (238-291)||(31798587-31798640)
chr1 (238-291)||(44108597-44108650)
chr1 (238-291)||(44557144-44557197)
chr1 (238-291)||(52024334-52024387)
chr1 (238-295)||(52125232-52125289)
chr1 (238-286)||(30292938-30292986)
chr1 (239-291)||(39125647-39125699)
chr1 (248-291)||(34110535-34110578)
chr1 (238-288)||(43358303-43358353)
chr1 (238-288)||(46554796-46554846)
chr1 (242-291)||(24611620-24611669)
chr1 (246-291)||(25151821-25151866)
chr1 (238-291)||(48009008-48009061)
chr1 (239-291)||(49426515-49426565)
chr1 (240-288)||(46271420-46271468)
chr1 (239-291)||(49402971-49403023)
chr1 (245-288)||(14373516-14373559)
chr1 (245-288)||(24884420-24884463)
chr1 (238-281)||(38947653-38947696)
chr1 (245-291)||(33622465-33622511)
chr1 (239-288)||(49900860-49900910)
chr1 (238-291)||(7191307-7191360)
chr1 (238-291)||(12484728-12484781)
chr1 (238-291)||(18794642-18794694)
chr1 (238-291)||(52706880-52706932)
chr1 (255-291)||(43759347-43759383)
[»] scaffold0110 (1 HSPs)
scaffold0110 (238-291)||(24842-24895)
[»] chr5 (45 HSPs)
chr5 (238-291)||(6518974-6519027)
chr5 (238-291)||(7317026-7317079)
chr5 (238-291)||(10345034-10345087)
chr5 (239-288)||(15167115-15167164)
chr5 (238-291)||(42104165-42104218)
chr5 (241-291)||(14620596-14620646)
chr5 (238-291)||(2729888-2729941)
chr5 (238-291)||(3025033-3025086)
chr5 (238-291)||(13761555-13761608)
chr5 (238-291)||(21319412-21319465)
chr5 (238-291)||(26660753-26660806)
chr5 (238-291)||(26932346-26932399)
chr5 (242-291)||(35766002-35766051)
chr5 (238-291)||(39566181-39566234)
chr5 (239-287)||(38362243-38362291)
chr5 (200-291)||(7579971-7580062)
chr5 (245-291)||(27797786-27797832)
chr5 (210-288)||(7721066-7721144)
chr5 (238-291)||(9066525-9066578)
chr5 (238-291)||(24280991-24281044)
chr5 (238-291)||(24381168-24381221)
chr5 (238-291)||(34446129-34446182)
chr5 (245-291)||(3306111-3306157)
chr5 (245-291)||(4630870-4630916)
chr5 (238-291)||(39504720-39504774)
chr5 (241-291)||(39729960-39730010)
chr5 (238-288)||(43584482-43584532)
chr5 (238-291)||(25362902-25362955)
chr5 (238-291)||(36073732-36073785)
chr5 (205-283)||(42978176-42978254)
chr5 (241-285)||(8336517-8336561)
chr5 (238-288)||(34208999-34209052)
chr5 (205-276)||(21375768-21375839)
chr5 (245-291)||(36164892-36164938)
chr5 (238-279)||(843019-843060)
chr5 (238-291)||(4911252-4911305)
chr5 (242-291)||(11977590-11977639)
chr5 (249-288)||(40776681-40776720)
chr5 (241-291)||(21195380-21195430)
chr5 (245-287)||(25768538-25768580)
chr5 (245-283)||(31041932-31041970)
chr5 (258-291)||(27600417-27600450)
chr5 (238-291)||(38369871-38369923)
chr5 (238-275)||(39804166-39804203)
chr5 (259-291)||(14005911-14005943)
[»] chr2 (59 HSPs)
chr2 (238-291)||(441333-441386)
chr2 (238-291)||(18579165-18579218)
chr2 (238-291)||(43427389-43427442)
chr2 (238-291)||(43971502-43971555)
chr2 (238-291)||(4133022-4133075)
chr2 (238-291)||(12342091-12342144)
chr2 (238-291)||(16792481-16792534)
chr2 (238-291)||(17703017-17703070)
chr2 (246-291)||(18719534-18719579)
chr2 (238-291)||(29396782-29396835)
chr2 (238-291)||(29808810-29808863)
chr2 (238-291)||(45301763-45301816)
chr2 (238-285)||(38926604-38926651)
chr2 (238-288)||(4051809-4051859)
chr2 (238-288)||(12566085-12566135)
chr2 (245-291)||(16463134-16463180)
chr2 (238-288)||(28072565-28072615)
chr2 (238-288)||(35799201-35799251)
chr2 (238-288)||(36177974-36178024)
chr2 (238-291)||(4469499-4469552)
chr2 (238-291)||(6220506-6220559)
chr2 (238-291)||(13561992-13562045)
chr2 (238-291)||(14833837-14833890)
chr2 (238-291)||(22620436-22620489)
chr2 (238-291)||(29411694-29411747)
chr2 (238-291)||(34546433-34546486)
chr2 (239-291)||(5717512-5717564)
chr2 (241-285)||(11188600-11188644)
chr2 (239-291)||(27964472-27964524)
chr2 (241-291)||(9391660-9391710)
chr2 (238-288)||(12394026-12394076)
chr2 (241-291)||(45082002-45082052)
chr2 (238-291)||(7028914-7028967)
chr2 (238-291)||(16807619-16807672)
chr2 (238-291)||(16846900-16846953)
chr2 (238-291)||(17695927-17695980)
chr2 (238-291)||(25383586-25383639)
chr2 (238-291)||(32228113-32228166)
chr2 (238-279)||(37038880-37038921)
chr2 (241-288)||(14285939-14285986)
chr2 (240-287)||(30855105-30855152)
chr2 (245-291)||(7644651-7644697)
chr2 (241-291)||(19164358-19164408)
chr2 (238-288)||(27986034-27986083)
chr2 (245-291)||(40608706-40608751)
chr2 (238-291)||(4288813-4288866)
chr2 (238-291)||(4658335-4658388)
chr2 (238-291)||(7042288-7042341)
chr2 (238-291)||(8540036-8540089)
chr2 (238-287)||(35046516-35046565)
chr2 (251-288)||(42753756-42753793)
chr2 (238-291)||(43480971-43481026)
chr2 (240-291)||(45423618-45423669)
chr2 (238-288)||(10195572-10195622)
chr2 (245-275)||(34035865-34035895)
chr2 (238-287)||(32254591-32254639)
chr2 (238-291)||(33482331-33482384)
chr2 (255-291)||(1423206-1423242)
chr2 (238-282)||(9366230-9366274)
[»] chr6 (28 HSPs)
chr6 (204-291)||(233997-234085)
chr6 (238-291)||(4850597-4850650)
chr6 (239-288)||(13503953-13504002)
chr6 (238-291)||(29399944-29399997)
chr6 (238-287)||(9940646-9940695)
chr6 (238-291)||(18737192-18737245)
chr6 (242-291)||(19674982-19675031)
chr6 (238-291)||(24163816-24163869)
chr6 (241-291)||(8030643-8030693)
chr6 (238-288)||(12063615-12063665)
chr6 (238-287)||(23259431-23259480)
chr6 (242-291)||(29713508-29713557)
chr6 (238-291)||(31233727-31233780)
chr6 (238-291)||(32429282-32429335)
chr6 (245-293)||(12588531-12588579)
chr6 (199-291)||(10520741-10520833)
chr6 (242-281)||(12322996-12323035)
chr6 (238-288)||(10540613-10540663)
chr6 (238-288)||(31443551-31443601)
chr6 (238-291)||(21272204-21272257)
chr6 (238-286)||(577059-577107)
chr6 (238-290)||(19600419-19600471)
chr6 (238-281)||(17552357-17552400)
chr6 (238-291)||(3988845-3988896)
chr6 (245-291)||(24556030-24556076)
chr6 (257-291)||(34513705-34513739)
chr6 (242-291)||(12459420-12459469)
chr6 (238-291)||(32193700-32193753)
[»] scaffold0294 (1 HSPs)
scaffold0294 (241-291)||(3606-3656)
[»] scaffold0078 (1 HSPs)
scaffold0078 (204-291)||(1515-1602)
[»] scaffold0565 (2 HSPs)
scaffold0565 (238-291)||(9743-9796)
scaffold0565 (238-288)||(10060-10110)
[»] scaffold0182 (1 HSPs)
scaffold0182 (242-291)||(18356-18405)
[»] scaffold0048 (1 HSPs)
scaffold0048 (238-291)||(62631-62684)
[»] scaffold2107 (1 HSPs)
scaffold2107 (245-291)||(615-661)
[»] scaffold0039 (1 HSPs)
scaffold0039 (238-282)||(75410-75454)
[»] scaffold0502 (1 HSPs)
scaffold0502 (245-291)||(673-719)
[»] scaffold0300 (1 HSPs)
scaffold0300 (241-291)||(4566-4616)
[»] scaffold0983 (1 HSPs)
scaffold0983 (238-291)||(788-841)
[»] scaffold0010 (1 HSPs)
scaffold0010 (238-289)||(153311-153362)
[»] scaffold0015 (1 HSPs)
scaffold0015 (245-291)||(21183-21229)
[»] scaffold0013 (1 HSPs)
scaffold0013 (238-271)||(45392-45425)


Alignment Details
Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 61 - 173
Target Start/End: Original strand, 22296877 - 22296989
Alignment:
Q  61 aacttatttgtgacttttatagacaacaaaatctatgaaaacaaacggattttgcacatcaaaatctataattttgtagatttatcggtgttttaacgta 160  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||    
T  22296877 aacttatttgtgacttttatagactacaaaatctatgaaaacaaacggattttgcacatcaaaatctataattttgtagatttataagtgttttgacgta 22296976  T
Q  161 tagaaaaagtata 173  Q
    |||||||||||||    
T  22296977 tagaaaaagtata 22296989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 291
Target Start/End: Original strand, 1741956 - 1742042
Alignment:
Q  205 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||         |||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  1741956 gtttcaaaatgagtgtcgttttagcccaaaaagttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctt 1742042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 2297036 - 2297089
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2297036 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataatatctttttctt 2297089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 22297994 - 22298047
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22297994 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 22298047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 42880087 - 42880034
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42880087 ttgtttcaaaatgaatgtcactttcagttttcaatgtaataataactttttctt 42880034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 45948783 - 45948730
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45948783 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 45948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 10599212 - 10599264
Alignment:
Q  239 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10599212 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttctt 10599264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 27935765 - 27935815
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27935765 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 27935815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 27947647 - 27947601
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27947647 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 27947601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 716016 - 715963
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  716016 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 715963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 12977839 - 12977786
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  12977839 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 12977786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 19105154 - 19105101
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  19105154 ttgttttaaaatgaatgtcactttcagtttttaatgcaataataactttttctt 19105101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 34274792 - 34274845
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  34274792 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctt 34274845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 37490782 - 37490835
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37490782 ttgtatcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 37490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 40927163 - 40927211
Alignment:
Q  240 gtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40927163 gtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 40927211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 48843550 - 48843602
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttct 290  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  48843550 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttct 48843602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 18270579 - 18270626
Alignment:
Q  242 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttc 289  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  18270579 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttc 18270626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 289
Target Start/End: Original strand, 18292333 - 18292384
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttc 289  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  18292333 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttc 18292384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 13405280 - 13405227
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||||||| ||||| |||||||||||||||||    
T  13405280 ttgttttaaaatgaatgtcactttcagtttccaatgtaataataactttttctt 13405227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 24680126 - 24680179
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  24680126 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 24680179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 37502321 - 37502370
Alignment:
Q  242 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  37502321 ttcaaaatgaacgtcactttcagtttccaatgcaataataactttttctt 37502370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 44567194 - 44567141
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  44567194 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataaatttttctt 44567141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 40339457 - 40339505
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttt 286  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  40339457 ttgtttcaaaatgactgtcactttcaattttcaatgcaataataacttt 40339505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 291
Target Start/End: Original strand, 48684726 - 48684774
Alignment:
Q  243 tcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||    
T  48684726 tcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 48684774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 10476141 - 10476187
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  10476141 aaaatgaatgtcactttcactttccaatgcaataataactttttctt 10476187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 289
Target Start/End: Complemental strand, 21752296 - 21752213
Alignment:
Q  206 tttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttc 289  Q
    ||||||||| ||||||||||||||        ||| |||||||| ||||||| ||||||||| |||||||||||||||||||||    
T  21752296 tttcaaaataagtgtcgttttagtaaaaaaaattggttcaaaataaatgtcattttcagtttccaatgcaataataactttttc 21752213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 24780459 - 24780409
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| |||||    
T  24780459 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataatttttt 24780409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 280
Target Start/End: Complemental strand, 45933737 - 45933695
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataat 280  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  45933737 ttgttttaaaatgaatgtcactttcagttttcaatgcaataat 45933695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 6747225 - 6747274
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttt 287  Q
    |||||| |||| |||||||||||||||||| |||||||||||||||||||    
T  6747225 ttgtttaaaaacgaatgtcactttcagtttccaatgcaataataactttt 6747274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 8603973 - 8604026
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||| |||||||||| ||| |||||||||||||||||||||||    
T  8603973 ttgttttaaaatgaacgtcactttcaatttccaatgcaataataactttttctt 8604026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 29531080 - 29531035
Alignment:
Q  246 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||    
T  29531080 aaatgaatgtcattttcagttttcaatgcaataataattttttctt 29531035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 31418666 - 31418613
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||| |||  |||||||||||| |||||||||||||||||||||||    
T  31418666 ttgtttcaaaataaattccactttcagtttccaatgcaataataactttttctt 31418613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 42285906 - 42285959
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  42285906 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataattttttctt 42285959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 44453141 - 44453181
Alignment:
Q  246 aaatgaatgtcactttcagttttcaatgcaataataacttt 286  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  44453141 aaatgaatgtcactttcagtttccaatgcaataataacttt 44453181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 22296803 - 22296842
Alignment:
Q  14 attttaaacatctaaattaaaacttttgtagacttgactg 53  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  22296803 attttaaacatctaaattaaaacttttgtagacttaactg 22296842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 291
Target Start/End: Original strand, 25440884 - 25440923
Alignment:
Q  252 atgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  25440884 atgtcactttcagtttccaatgcaataataactttttctt 25440923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 28289219 - 28289266
Alignment:
Q  244 caaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  28289219 caaaataaatgtcactttgagttttcaatgcaataataacattttctt 28289266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 32501902 - 32501855
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactt 285  Q
    |||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  32501902 ttgttttaaaataaatatcactttcagttttcaatgcaataataactt 32501855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 1031153 - 1031203
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||||||||||||||||||| |||||||| || |||||||||||| ||||    
T  1031153 ttgtttcaaaatgaatgtcaccttcagtttccattgcaataataacatttt 1031203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 30312463 - 30312509
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  30312463 aaaatgaatgtcactttcggttttcaatacaataataattttttctt 30312509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 35777817 - 35777867
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||| |||||||||||| ||||  |||||||||||||||||||    
T  35777817 ttgtttcaaaataaatgtcactttcggtttctaatgcaataataacttttt 35777867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 40753574 - 40753528
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||||    
T  40753574 aaaatgaatgtcattttcagttttcaatgtaataataattttttctt 40753528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 23935420 - 23935473
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||| ||||||  ||||||||| |||||||||||||||||||||||    
T  23935420 ttgttttaaaataaatgtcgttttcagtttccaatgcaataataactttttctt 23935473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 24133283 - 24133230
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||| |||| |||||||||||||| |||||||||||||| ||||||||    
T  24133283 ttgttttaaactgaacgtcactttcagtttccaatgcaataataattttttctt 24133230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 33939887 - 33939834
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||||||||||||  |||| ||||| |||||||||||||||||    
T  33939887 ttgttttaaaatgaatgtcacttttggtttccaatgtaataataactttttctt 33939834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 37815722 - 37815775
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||| |||||| ||| |||| ||||||||| ||||||||    
T  37815722 ttgtttcaaaatgaatgtcgctttcaatttccaatacaataataattttttctt 37815775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 39557327 - 39557372
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttct 290  Q
    ||||| ||||||||||||||||||||||| |||||||| |||||||    
T  39557327 aaaataaatgtcactttcagttttcaatgtaataataattttttct 39557372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 41137726 - 41137779
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||| |||||||| |||||| ||||| |||||||||||||| ||||||||    
T  41137726 ttgtttcacaatgaatgccacttttagtttccaatgcaataataattttttctt 41137779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 42753706 - 42753751
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataac 283  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||||    
T  42753706 ttgtttcaaaatgaatgtcactttcaatttccaatacaataataac 42753751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 45499980 - 45499927
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||| ||||||||||||| |||||| |||||||  |||||||    
T  45499980 ttgtttcaaaatgaatttcactttcagtttccaatgccataataatattttctt 45499927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 6563560 - 6563514
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||| ||||||||||||||| |||  |||||||||||||||||    
T  6563560 aaaatgaacgtcactttcagtttttaatttaataataactttttctt 6563514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 29636375 - 29636333
Alignment:
Q  243 tcaaaatgaatgtcactttcagttttcaatgcaataataactt 285  Q
    ||||||| |||||||||||||||||  ||||||||||||||||    
T  29636375 tcaaaataaatgtcactttcagtttctaatgcaataataactt 29636333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 31930006 - 31929960
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||| | | |||||||||||||||||||||||| ||||||||    
T  31930006 aaaatgaatattattttcagttttcaatgcaataataattttttctt 31929960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 34012159 - 34012209
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||| ||||||||||||||||| ||||| ||||| | ||||||||||||    
T  34012159 ttgttttaaaatgaatgtcactttaagtttccaatgtactaataacttttt 34012209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 287
Target Start/End: Complemental strand, 8334425 - 8334376
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttt 287  Q
    |||||||||||| ||||||||||||| ||| |||| ||||||||| ||||    
T  8334425 ttgtttcaaaatcaatgtcactttcattttccaatccaataataaatttt 8334376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 36807933 - 36807986
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||| ||||||| ||||  |||||||| ||||||||||||||||||    
T  36807933 ttgttttaaaataaatgtcattttcgcttttcaatacaataataactttttctt 36807986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 21819282 - 21819326
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataa 282  Q
    ||||||||||||||| || | |||||||||||||| |||||||||    
T  21819282 ttgtttcaaaatgaaagttattttcagttttcaatacaataataa 21819326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 39766014 - 39765955
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttctcact 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39766014 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcact 39765955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 6374412 - 6374465
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6374412 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 6374465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 39698854 - 39698768
Alignment:
Q  205 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39698854 gtttcaaaatgagtgtcgttttagccaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39698768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 40228572 - 40228625
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40228572 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 40228625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 291
Target Start/End: Original strand, 4989443 - 4989529
Alignment:
Q  205 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||| ||||||||||||||||||||        |||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  4989443 gttttaaaatgagtgtcgttttagtaaaaaaaattgtttcaaaatgaatatcactttcagtttccaatgcaataataactttttctt 4989529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 15160601 - 15160548
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15160601 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 15160548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 17920954 - 17921007
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17920954 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 17921007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 39463257 - 39463310
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39463257 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39463310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 40362433 - 40362486
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  40362433 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 40362486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 198 - 291
Target Start/End: Complemental strand, 43084821 - 43084729
Alignment:
Q  198 tccatttgtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||| |||||||||||||||||||||||||         || ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43084821 tccatctgtttcaaaatgagtgtcgttttagc-aaaaaaattattttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 43084729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 31693776 - 31693723
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  31693776 ttgttttaaaatgaatatcactttcagttttcaatgcaataataactttttctt 31693723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 43448714 - 43448764
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  43448714 ttgtttcaaaatgaatatcactttcagtttccaatgcaataataacttttt 43448764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 43974943 - 43974893
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  43974943 tttcaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 43974893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 6116160 - 6116107
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  6116160 ttgttttaaaatgaatatcactttcggttttcaatgcaataataactttttctt 6116107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 7839456 - 7839509
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  7839456 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataaccttttctt 7839509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 9880689 - 9880603
Alignment:
Q  205 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||| ||||||||||||||||||||        ||||||||||||||||||||||  |||||| |||||||||||||| ||||||||    
T  9880689 gttttaaaatgagtgtcgttttagtcaaaaaaattgtttcaaaatgaatgtcactcacagtttccaatgcaataataattttttctt 9880603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 29025901 - 29025848
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||||||||||||    
T  29025901 ttgtttcaaaacgaatgtcactttaagtttccaatgcaataataactttttctt 29025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 43724379 - 43724434
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttct 293  Q
    |||||||||||||||| ||||||||||||| |||||||||||||| ||||| ||||    
T  43724379 ttgtttcaaaatgaatttcactttcagtttccaatgcaataataatttttttttct 43724434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 514879 - 514925
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  514879 aaaatgaatgtcactttcaattttcaatgcaataataattttttctt 514925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 9812171 - 9812221
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||| |||||||||||||||||||||||  |||||||||||||||||||    
T  9812171 ttgttttaaaatgaatgtcactttcagtttctaatgcaataataacttttt 9812221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 35356308 - 35356358
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  35356308 tttcaaaatgaatatcattttcagtttccaatgcaataataactttttctt 35356358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 9304788 - 9304735
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||    
T  9304788 ttgtttcaaaatgaatgtgacttttagtttccaatgcaataataattttttctt 9304735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 15227565 - 15227618
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| | ||||||    
T  15227565 ttgtttcaaaatgaatgtcactttcaaatttcaatgcaataataaatgtttctt 15227618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 17655906 - 17655958
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||||||||||    
T  17655906 ttgtttcaaaat-aatgttaccttcagttttcaatgcaataataactttttctt 17655958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 37559688 - 37559635
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  37559688 ttgttttaaaatcaatgtcactttcagtttccaatacaataataactttttctt 37559635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 45359049 - 45358996
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||| ||||||||    
T  45359049 ttgtttcaaaatgactgtcattttcaattttcaatgcaataataattttttctt 45358996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 43561344 - 43561390
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttc 292  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  43561344 aaaatgaatgtcaccttcagttttcaatgcaataataa-tttttcttc 43561390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 396369 - 396315
Alignment:
Q  238 ttgtttcaaaatgaatgtcacttt-cagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  396369 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 396315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 36921362 - 36921408
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||||    
T  36921362 aaaatgaacgtcactttcaattttcaatgcaataataattttttctt 36921408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 44713532 - 44713582
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||| ||||||||| ||||||||| ||| ||||||||||||||||||||    
T  44713532 ttgttttaaaatgaatatcactttcattttccaatgcaataataacttttt 44713582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 4760713 - 4760660
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||| ||| |||||||| ||||| ||||||||    
T  4760713 ttgttttaaaatgaatgtcactttcattttccaatgcaacaataattttttctt 4760660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 19438234 - 19438287
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||| |||| ||||||||| ||||||| ||||| |||||||||||||||||    
T  19438234 ttgtttcgaaataaatgtcactctcagtttccaatgtaataataactttttctt 19438287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 291
Target Start/End: Complemental strand, 5295556 - 5295508
Alignment:
Q  243 tcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||| |||||  ||||||||||||| ||||||||    
T  5295556 tcaaaatgaatgtcactttaagtttctaatgcaataataattttttctt 5295508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 283
Target Start/End: Complemental strand, 29312341 - 29312303
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataac 283  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  29312341 aaaatgaatgtcattttcagtttccaatgcaataataac 29312303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 31234084 - 31234047
Alignment:
Q  248 atgaatgtcactttcagttttcaatgcaataataactt 285  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  31234084 atgaatgtcacttttagtttttaatgcaataataactt 31234047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 31899395 - 31899350
Alignment:
Q  246 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||| || ||||||||||||| |||||||||||||| ||||||||    
T  31899395 aaatggatatcactttcagtttccaatgcaataataattttttctt 31899350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 34796833 - 34796780
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||  |||| |||||  ||||||||||||| ||||||||    
T  34796833 ttgtttcaaaatgaatgttccttttagtttctaatgcaataataattttttctt 34796780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 291
Target Start/End: Original strand, 41679338 - 41679370
Alignment:
Q  259 tttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||| ||||||||||||||||||    
T  41679338 tttcagttttcaatacaataataactttttctt 41679370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 3965 - 3912
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3965 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 3912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 5e-22; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 3152958 - 3152905
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3152958 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 3152905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 291
Target Start/End: Original strand, 38016340 - 38016426
Alignment:
Q  205 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38016340 gtttcaaaatgagtgtcgttttagccaaagaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 38016426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 291
Target Start/End: Original strand, 30431084 - 30431171
Alignment:
Q  204 tgtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||         || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30431084 tgtttcaaaatgagtgtcgttttagccaaaaaaattatttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 30431171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 32492364 - 32492280
Alignment:
Q  205 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32492364 gtttcaaaatgagtgtcgttttag--gcaaaaattgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 32492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 50038323 - 50038270
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  50038323 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 50038270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 36460805 - 36460857
Alignment:
Q  239 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36460805 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttctt 36460857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 2458005 - 2458058
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  2458005 ttgtttcaaaatgaatgtcactttcagtttccaatacaataataactttttctt 2458058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 19115385 - 19115438
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  19115385 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttctt 19115438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 30426476 - 30426423
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  30426476 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 30426423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 42571681 - 42571628
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  42571681 ttgtttcaaaatgaatgtcacttgcagtttccaatgcaataataactttttctt 42571628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 44676219 - 44676272
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  44676219 ttgtttcaaaatgaatgtcactttcagtttccaatgcaatgataactttttctt 44676272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 47895496 - 47895443
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  47895496 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 47895443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 48901718 - 48901771
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  48901718 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 48901771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 48903284 - 48903337
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  48903284 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 48903337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 50646262 - 50646209
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  50646262 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttctt 50646209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 53200832 - 53200779
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  53200832 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataactttttctt 53200779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 45213906 - 45213821
Alignment:
Q  205 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||| |||||||||||||||||||||       |||||| |||||||||||||||||||||||  ||||||||||||||||||||||    
T  45213906 gttttaaaatgagtgtcgttttagttaaaaaa-ttgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttctt 45213821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 9189580 - 9189534
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  9189580 aaaatgaatgtcactttcagttttcaatgaaataataactttttctt 9189534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 23208474 - 23208390
Alignment:
Q  205 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||| ||||||||||||||| |       |||||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  23208474 gtttcaaattgagtgtcgttttagctaaaaaaattgtttcaaaatgaatgtcactttcagtttccaa--caataataactttttctt 23208390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 291
Target Start/End: Original strand, 39356849 - 39356936
Alignment:
Q  205 gtttcaaaatgagtgtcgttttagttnnnnnnn-ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||| |||||||||||        |||||| ||||| ||||||||||||||||||||||||||||||||| |||||||    
T  39356849 gtttcaaaatgagtatcgttttagttaaaaaaaattgttttaaaataaatgtcactttcagttttcaatgcaataataacattttctt 39356936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 30315307 - 30315360
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||| |||| |||||||| ||||||||||||||    
T  30315307 ttgtttcaaaatgaatgtcactttccgtttccaatgcaagaataactttttctt 30315360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 36844894 - 36844841
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  36844894 ttgtttcaaaaccaatgtcactttcagttttcaatgcaataataattttttctt 36844841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 38140949 - 38140998
Alignment:
Q  239 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  38140949 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataacctttt 38140998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 51398008 - 51398061
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||    
T  51398008 ttgtttcaaaataaatgtcacttttagttttcaatgtaataataactttttctt 51398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 291
Target Start/End: Complemental strand, 36729957 - 36729909
Alignment:
Q  243 tcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  36729957 tcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 36729909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 38363785 - 38363833
Alignment:
Q  240 gtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  38363785 gtttcaaaatgaatgtcactttcagtttacaatgcaataataacctttt 38363833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 19373584 - 19373634
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  19373584 ttgtttcaaaatgactgtcactttcaattttcaatgaaataataacttttt 19373634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 33194183 - 33194133
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||| ||||||||||||||||||||||| ||||||||| ||||||||||    
T  33194183 ttgttttaaaatgaatgtcactttcagtttccaatgcaatgataacttttt 33194133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 47137961 - 47138011
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||||||||||    
T  47137961 ttgttttaaaatgaatgtcatttttagttttcaatgcaataataacttttt 47138011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 4392194 - 4392247
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||| ||||||||| ||||  |||||||||||||||||    
T  4392194 ttgtttcaaaatgaatgtcagtttcagtttccaatttaataataactttttctt 4392247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 4758989 - 4759042
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  4758989 ttgttttaaaataaatgtcactttcactttccaatgcaataataactttttctt 4759042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 11019978 - 11019925
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  11019978 ttgttttaaaattaatgtcactttcatttttcaatgcaataataattttttctt 11019925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 11393543 - 11393596
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  11393543 ttgttttaaaatgaatgtcattttcaatttccaatgcaataataactttttctt 11393596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 22857088 - 22857141
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||  ||||||||| |||||||||||||||||    
T  22857088 ttgttttaaaatgaatgtcactttcgattttcaatgtaataataactttttctt 22857141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 41850388 - 41850441
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||||| |||||| ||||| |||||||||||||||||||||||    
T  41850388 ttgttttaaaatgaatgacacttttagtttccaatgcaataataactttttctt 41850441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 42886749 - 42886802
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||| ||||| | ||| |||||||||||||||||||||||    
T  42886749 ttgtttcaaaatgaatgttactttaaatttccaatgcaataataactttttctt 42886802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 52654310 - 52654355
Alignment:
Q  246 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||    
T  52654310 aaataaatgtcactttcagttttcaatacaataataactttttctt 52654355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 7231047 - 7230995
Alignment:
Q  239 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||| ||||   ||||||||||||||||||||||    
T  7231047 tgtttcaaaatgaatgtcacttttagttacgaatgcaataataactttttctt 7230995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 33024445 - 33024399
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||||    
T  33024445 aaaatgaatgttactttcagtttccaatgcaataataactttatctt 33024399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 40487829 - 40487879
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||   ||| |||||||||||||||||||||||    
T  40487829 tttcaaaatgaatgtcacttttgatttccaatgcaataataactttttctt 40487879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 42071983 - 42072036
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||| |||||| ||| ||||| |||||||||||||||||||||||    
T  42071983 ttgttttaaaatggatgtcatttttagtttccaatgcaataataactttttctt 42072036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 50088468 - 50088415
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||| |||||||| ||||| |||||||||| ||||||||||||    
T  50088468 ttgttttaaaatgaacgtcacttttagtttccaatgcaatagtaactttttctt 50088415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 8817139 - 8817189
Alignment:
Q  239 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttc 289  Q
    ||||| ||||||||||| | |||||||| ||||||||||||||| ||||||    
T  8817139 tgttttaaaatgaatgttattttcagttatcaatgcaataataattttttc 8817189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 41287651 - 41287595
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaa---taataactttttctt 291  Q
    ||||||||||||||||||||||||| |||| || |||||   |||||||||||||||    
T  41287651 ttgtttcaaaatgaatgtcactttcggtttccagtgcaatactaataactttttctt 41287595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 31583586 - 31583533
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||| ||||||||||||||||| || |||||||||||  |||||||    
T  31583586 ttgttttaaaattaatgtcactttcagtttccagtgcaataataatcttttctt 31583533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 31853714 - 31853661
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||| ||||||||||| ||||| || | ||||||||| ||||||||    
T  31853714 ttgtttcaaaataaatgtcacttttagtttccagtacaataataattttttctt 31853661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 35557910 - 35557857
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||  || ||||||||||||| |||||||||||||| ||||||||    
T  35557910 ttgttttaaaatatatatcactttcagtttccaatgcaataataattttttctt 35557857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 42939967 - 42940004
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgca 275  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  42939967 ttgtttcaaaatgaatgtcattttcatttttcaatgca 42940004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 47823603 - 47823550
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||| ||||||| ||| |||||| ||||||||||||| ||||||||    
T  47823603 ttgttttaaaataaatgtcatttttagtttttaatgcaataataattttttctt 47823550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 51058304 - 51058267
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgca 275  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  51058304 ttgttttaaaatgaatgtcactttaagttttcaatgca 51058267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 51324191 - 51324143
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttt 286  Q
    |||||| ||||| ||||||| ||||||| ||||||| ||||||||||||    
T  51324191 ttgttttaaaataaatgtcattttcagtattcaatgtaataataacttt 51324143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 291
Target Start/End: Original strand, 19878612 - 19878699
Alignment:
Q  204 tgtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||         |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  19878612 tgtttcaaaatgagtgtcgttttagcaaaaaaaattgtttgaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 19878699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 4505335 - 4505388
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4505335 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 4505388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 19451370 - 19451317
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19451370 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 19451317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 20448037 - 20448090
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20448037 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 20448090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 52957949 - 52957896
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  52957949 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 52957896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 1819528 - 1819613
Alignment:
Q  206 tttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  1819528 tttcaaaatgagtgtcgttttagcaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataaatttttctt 1819613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 49089462 - 49089512
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  49089462 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataacttttt 49089512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 37624554 - 37624607
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  37624554 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttctt 37624607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 40345506 - 40345453
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  40345506 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 40345453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 45043747 - 45043694
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  45043747 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 45043694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 52253843 - 52253896
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  52253843 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttcttctt 52253896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 52915701 - 52915648
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  52915701 ttgtttcaaaatgaatgtcgctttcagtttccaatgcaataataactttttctt 52915648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 291
Target Start/End: Original strand, 39982106 - 39982154
Alignment:
Q  243 tcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39982106 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39982154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 41496159 - 41496256
Alignment:
Q  195 tattccatttgtttcaaaatgagtgtcgttttagttnnnnnnn-ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||| |||||||||||||||||||||| |||||| |        |||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  41496159 tatttcatttgtttcaaaatgagtgtcattttagctaacaaaaattgtttcaaaataaatctcactttcagttttcaatacaataataactttttctt 41496256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 27943705 - 27943658
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactt 285  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  27943705 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataactt 27943658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 40837128 - 40837178
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  40837128 ttgtttcaaaatgaatgtcactttcattttccaatgcaataataacttttt 40837178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 49080635 - 49080586
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  49080635 ttgtttcaaaatgaatgtcactttcagtttt-aatgcaataataacttttt 49080586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 2728553 - 2728504
Alignment:
Q  242 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  2728553 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 2728504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 10573313 - 10573260
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  10573313 ttgtttcaaaatgaatgtcatttttagtttccaatgcaataataactttttctt 10573260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 19930712 - 19930765
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||| ||| | |||||||||||||||||||||    
T  19930712 ttgtttcaaaatgaatgtcactttcaatttccgatgcaataataactttttctt 19930765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 22220518 - 22220465
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  22220518 ttgtttcaaaataaatgtcattttcaattttcaatgcaataataactttttctt 22220465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 25231173 - 25231226
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  25231173 ttgttttaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 25231226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 30261257 - 30261310
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  30261257 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatgttttctt 30261310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 47817736 - 47817789
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  47817736 ttgtttcaaaatgaatttaactttcagtttgcaatgcaataataactttttctt 47817789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 51733653 - 51733600
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| ||||||||    
T  51733653 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttctt 51733600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 291
Target Start/End: Complemental strand, 50621341 - 50621293
Alignment:
Q  243 tcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  50621341 tcaaaataaatgtcactttaagttttcaatgcaataataactttttctt 50621293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 56460082 - 56460134
Alignment:
Q  239 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||    
T  56460082 tgttttaaaatgaatgtcactttcagctttcaatgcaatagtaactttttctt 56460134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 6991413 - 6991367
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||    
T  6991413 aaaatgaatgtcactttcagttttcaatacaataataattttttctt 6991367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 7906152 - 7906102
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  7906152 tttcaaaatgaatgtcactttcagtttccggtgcaataataactttttctt 7906102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 21864535 - 21864489
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  21864535 aaaatgaatgttactttcagtttccaatgcaataataactttttctt 21864489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 21920396 - 21920350
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  21920396 aaaatgaatgttactttcagtttccaatgcaataataactttttctt 21920350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 29519684 - 29519634
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  29519684 ttgtttcaaaataaatgtcacttttagtttccaatgcaataataacttttt 29519634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 2493100 - 2493153
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||| ||||||||    
T  2493100 ttgtttcaaaatgaaagtcactttcattttccaatgcaataataattttttctt 2493153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 24940877 - 24940930
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||| ||||  ||| |||||||||||||||||||||||    
T  24940877 ttgtttcaaaatgaatgtcattttcgatttccaatgcaataataactttttctt 24940930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 44572024 - 44571971
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||||||| |||||||||| ||||||||||| |||||||||||    
T  44572024 ttgttttaaaatgaatgtcgctttcagtttccaatgcaataaaaactttttctt 44571971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 52848213 - 52848160
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||| ||||||||    
T  52848213 ttgttttaaaatgaatgtcactttcaatttccaatgcaataataattttttctt 52848160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 37654376 - 37654460
Alignment:
Q  206 tttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||        |||||| ||||||||||||| || |||||| |||| ||||||||||||||||||    
T  37654376 tttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctt 37654460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 29370608 - 29370654
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||    
T  29370608 aaaataaatgtcactttcagttttcaatataataataactttttctt 29370654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 34413706 - 34413656
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||| ||||||||||||| |||  |||||||||||||||||||    
T  34413706 ttgtttcaaaataaatgtcactttcaatttcaaatgcaataataacttttt 34413656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 50203074 - 50203125
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||||  | |||||||||||||||||||||||    
T  50203074 ttgttttaaaatgaatgtcactttcag--tccaatgcaataataactttttctt 50203125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 53814656 - 53814606
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||| |||||||||||||||||| ||||  ||||||||||||||||||||    
T  53814656 ttgttccaaaatgaatgtcacttttagttaacaatgcaataataacttttt 53814606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 8971040 - 8971093
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||  |||||||||||||||||||| |||||||| ||||||||    
T  8971040 ttgttttaaaatgaccgtcactttcagttttcaatgaaataataattttttctt 8971093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 41920468 - 41920415
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||| ||||||| ||||||||| ||| |||||||||||||||||||    
T  41920468 ttgttttaaaataaatgtcattttcagtttccaaagcaataataactttttctt 41920415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 50623081 - 50623134
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||| |||| | ||| |||||||||||||||||||||||||||||    
T  50623081 ttgttttaaaatgtatgttatttttagttttcaatgcaataataactttttctt 50623134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 54042342 - 54042289
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||||||||||||| |||| ||||| |||||||| ||||||||    
T  54042342 ttgttttaaaatgaatgtcactttcggtttccaatgtaataataattttttctt 54042289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 28734596 - 28734640
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataa 282  Q
    |||||||| ||||||||||||||||||||| || |||||||||||    
T  28734596 ttgtttcataatgaatgtcactttcagtttccattgcaataataa 28734640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 33033076 - 33033120
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataa 282  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  33033076 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataa 33033120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 34316227 - 34316270
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||| ||||||||||||||||| |||||||||||||| |||||    
T  34316227 aaaataaatgtcactttcagtttccaatgcaataataatttttt 34316270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 40011033 - 40010986
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactt 285  Q
    |||||| ||||||||||| ||||||||||| ||||||||||| |||||    
T  40011033 ttgttttaaaatgaatgttactttcagtttccaatgcaataacaactt 40010986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 52162111 - 52162154
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||    
T  52162111 aaaatgaatgtcactttcaattttcaacgcaataataatttttt 52162154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 291
Target Start/End: Original strand, 31917920 - 31918007
Alignment:
Q  204 tgtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||| ||||| ||||||||||||| |       |||||| ||||||||| |||||||||| || |||||||||||||  ||||||||    
T  31917920 tgttttaaaataagtgtcgttttagataaaaaaattgttttaaaatgaatttcactttcagcttccaatgcaataatagttttttctt 31918007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 44650893 - 44650927
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataa 279  Q
    |||||||| ||||||||||||||||||||||||||    
T  44650893 aaaatgaacgtcactttcagttttcaatgcaataa 44650927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 45839643 - 45839685
Alignment:
Q  246 aaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||||||||||||||||||||  ||| |||||||||||||||    
T  45839643 aaatgaatgtcactttcagtttctaatacaataataacttttt 45839685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 24157183 - 24157236
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||| ||||||| ||| |||||  ||||||||||||| ||||||||    
T  24157183 ttgtttcaaaataaatgtcaattttagtttctaatgcaataataattttttctt 24157236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 44061006 - 44061059
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| | ||||||||||||||||| |||  ||| ||||||||||||||||||    
T  44061006 ttgttttataatgaatgtcactttcattttctaatacaataataactttttctt 44061059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 25123872 - 25123832
Alignment:
Q  251 aatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||| |||||||||||||| ||||||||| ||||||||    
T  25123872 aatgtcattttcagttttcaatacaataataattttttctt 25123832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 291
Target Start/End: Complemental strand, 38510379 - 38510351
Alignment:
Q  263 agttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||    
T  38510379 agttttcaatgcaataataactttttctt 38510351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 55092607 - 55092567
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaata 278  Q
    |||||||||||||||||||| ||||  ||||||||||||||    
T  55092607 ttgtttcaaaatgaatgtcattttcgattttcaatgcaata 55092567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 15573605 - 15573655
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15573605 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 15573655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 32807125 - 32807038
Alignment:
Q  205 gtttcaaaatgagtgtcgttttagt-tnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||  |       |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32807125 gtttcaaaatgagtgtcgttttagcctaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 32807038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 288
Target Start/End: Original strand, 46045938 - 46046021
Alignment:
Q  205 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||| ||||||||||||||||||||        |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46045938 gttttaaaatgagtgtcgttttagtaaaaaaaattgtttcaaaatgaatgtcactttcagttttcgatgcaataataacttttt 46046021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 26352234 - 26352181
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26352234 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataactttttctt 26352181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 29567894 - 29567947
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29567894 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 29567947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 50249308 - 50249361
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50249308 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 50249361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 10842781 - 10842831
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10842781 tttcaaaatgaatgtcactttcagttttcaatgcaataataacattttctt 10842831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 25487093 - 25487139
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  25487093 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 25487139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 5463573 - 5463626
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  5463573 ttgtttcaaaatgaatgtcactttcagtttccaatgcaattataactttttctt 5463626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 15823032 - 15823085
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  15823032 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 15823085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 34032233 - 34032180
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  34032233 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 34032180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 34047388 - 34047335
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  34047388 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttctt 34047335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 38531483 - 38531397
Alignment:
Q  205 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||| |||||||||||        |||||||||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  38531483 gtttcaaaatgagcgtcgttttagtcaaaaaaattgtttcaaaatgaatgtcattttcagtttccaatgcaataataattttttctt 38531397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 40717445 - 40717396
Alignment:
Q  242 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40717445 ttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 40717396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 291
Target Start/End: Original strand, 50094232 - 50094280
Alignment:
Q  243 tcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50094232 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 50094280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 289
Target Start/End: Complemental strand, 48025407 - 48025356
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttc 289  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  48025407 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttc 48025356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 12591235 - 12591182
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  12591235 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 12591182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 13408418 - 13408365
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||||||    
T  13408418 ttgttttaaaatgaattttactttcagttttcaatgcaataataactttttctt 13408365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 16757347 - 16757294
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||    
T  16757347 ttgtttcaaaatgtatgtcactttcagtttccaatgcaataataacttattctt 16757294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 26755218 - 26755271
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||| || |||||||||||||||    
T  26755218 ttgtttcaaaatgaatgtcactttcagtttccaatacattaataactttttctt 26755271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 31491923 - 31491870
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||||||||||    
T  31491923 ttgtttcaaaatgaatgtcactttcaattttcaatgtcataataactttttctt 31491870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 35848086 - 35848033
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  35848086 ttgtttgaaagtgaatgtcactttcagtttacaatgcaataataactttttctt 35848033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 44258660 - 44258607
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  44258660 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 44258607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 49468864 - 49468811
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  49468864 ttgtttcaaaatgaatgtaactttcagtttccaatgcaataataacattttctt 49468811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 26595221 - 26595169
Alignment:
Q  239 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  26595221 tgttttaaaatgaatgtcactttcagtttacaatgcaataataaatttttctt 26595169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 1740794 - 1740744
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  1740794 ttgttttaaaatgaatgtcactttcagtttccaatgaaataataacttttt 1740744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 27208987 - 27209037
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||    
T  27208987 ttgtttcgaaatgaatgtcactttcggtttccaatgcaataataacttttt 27209037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 27720963 - 27721009
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  27720963 aaaatgaatgtcactttcagttttcaatataataataactttttctt 27721009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 46286964 - 46286918
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||    
T  46286964 aaaaagaatgtcactttcatttttcaatgcaataataactttttctt 46286918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 9915441 - 9915494
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  9915441 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataaatttttctt 9915494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 14593465 - 14593420
Alignment:
Q  246 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||    
T  14593465 aaatgaatgtcactttcagtttccaatgcaataataattttttctt 14593420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 24483386 - 24483439
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||    
T  24483386 ttgtttcaaaatgaatgtcagtttcagtttccaatacaataataactgtttctt 24483439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 31798587 - 31798640
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||| |||||||||||||| | || ||||||||||||||||||    
T  31798587 ttgtttcaaaatgaacgtcactttcagtttccgatacaataataactttttctt 31798640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 44108597 - 44108650
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  44108597 ttgttttaaaataaatgtcactttcagtttccaatacaataataactttttctt 44108650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 44557197 - 44557144
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||| |||||||    
T  44557197 ttgttttaaaatgaatgtcactttcagtctccaatgcaataataacattttctt 44557144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 52024387 - 52024334
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||| ||||| | |||||||||||||||||||||||| ||||||||    
T  52024387 ttgtttcaaaataaatgttattttcagttttcaatgcaataataaatttttctt 52024334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 52125289 - 52125232
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttctca 295  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||| ||||| ||||||    
T  52125289 ttgtttcgaaatgaatgtcaatttcagtttccaatgcaataataattttttattctca 52125232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 30292938 - 30292986
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttt 286  Q
    |||||| |||||||||| |||||||||||| ||||||||||||||||||    
T  30292938 ttgttttaaaatgaatgccactttcagtttccaatgcaataataacttt 30292986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 39125647 - 39125699
Alignment:
Q  239 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||| ||||||||    
T  39125647 tgtttcaaaatgactgtcattttaagttttcaatgcaataataaatttttctt 39125699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 291
Target Start/End: Original strand, 34110535 - 34110578
Alignment:
Q  248 atgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  34110535 atgaatgttactttcagtttccaatgcaataataactttttctt 34110578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 43358353 - 43358303
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||||| ||||    
T  43358353 ttgtttcaatatgaatatcactttcacttttcaatgcaataataacatttt 43358303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 46554796 - 46554846
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||| |||||||||||||| |||||||| || |||||||||||||||||    
T  46554796 ttgttttaaaatgaatgtcaccttcagtttccactgcaataataacttttt 46554846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 24611669 - 24611620
Alignment:
Q  242 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||| |||||  |||| |||||||||||||||||    
T  24611669 ttcaaaatgaatgtcacttttagtttctaatgtaataataactttttctt 24611620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 25151821 - 25151866
Alignment:
Q  246 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||    
T  25151821 aaatgaatgtcactttcggtttccaatgcaataataacattttctt 25151866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 48009008 - 48009061
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||||| || ||| |||||| ||||||||||||||||||||||    
T  48009008 ttgttttaaaatgaatggcatttttagtttttaatgcaataataactttttctt 48009061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 49426565 - 49426515
Alignment:
Q  239 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||| |||||||||  ||||||||||||||||||||| ||||||||    
T  49426565 tgtttcaaaataaatgtcact--cagttttcaatgcaataataattttttctt 49426515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 46271468 - 46271420
Alignment:
Q  240 gtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||||||||| ||||||||| ||||| |||||||| |||||    
T  46271468 gtttcaaaatgaatgtcattttcagtttccaatggaataataatttttt 46271420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 49403023 - 49402971
Alignment:
Q  239 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||| ||| ||  ||||||||| |||||||||||||||||||||||    
T  49403023 tgtttcaaaataaatatcgttttcagtttccaatgcaataataactttttctt 49402971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 14373559 - 14373516
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||    
T  14373559 aaaatgaatgtcattttcagtttccaatgcaacaataacttttt 14373516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 24884420 - 24884463
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||    
T  24884420 aaaataaatgtcactttcaatttccaatgcaataataacttttt 24884463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 281
Target Start/End: Original strand, 38947653 - 38947696
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataata 281  Q
    |||||| ||||||||||||||||||||| | |||||||||||||    
T  38947653 ttgttttaaaatgaatgtcactttcagtatccaatgcaataata 38947696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 33622511 - 33622465
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||| ||||  |||||||||||||||||||||| ||||    
T  33622511 aaaatgaatgtcattttcgattttcaatgcaataataactttatctt 33622465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 49900910 - 49900860
Alignment:
Q  239 tgtttcaaaatgaatgtcactttcagttttc-aatgcaataataacttttt 288  Q
    ||||| ||||| ||||||||||||||||||| ||| |||||||||||||||    
T  49900910 tgttttaaaataaatgtcactttcagttttcaaatacaataataacttttt 49900860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 7191360 - 7191307
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||| ||||||||||||  ||||| ||| |||||||||||||||||    
T  7191360 ttgttttaaaataaatgtcactttcgattttctatgtaataataactttttctt 7191307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 12484781 - 12484728
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||| ||| ||||| ||  |||| ||||||||||||||||||    
T  12484781 ttgtttcaaaatgaatttcattttcatttgccaatacaataataactttttctt 12484728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 18794694 - 18794642
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||| ||||||| |||||||||  ||||||||||||||||||||||    
T  18794694 ttgttttaaaataaatgtca-tttcagtttcgaatgcaataataactttttctt 18794642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 52706880 - 52706932
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||| |||||||||||||||||| |||| |||||||| ||||||||    
T  52706880 ttgttttaaaat-aatgtcactttcagtttttaatgtaataataattttttctt 52706932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 291
Target Start/End: Original strand, 43759347 - 43759383
Alignment:
Q  255 tcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  43759347 tcactttcagttttcgatgcaataataattttttctt 43759383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 24895 - 24842
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24895 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 24842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 6518974 - 6519027
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6518974 ttgtttcaaaatgaatgtcgctttcagttttcaatgcaataataactttttctt 6519027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 7317026 - 7317079
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7317026 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 7317079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 10345087 - 10345034
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10345087 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 10345034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 15167164 - 15167115
Alignment:
Q  239 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15167164 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 15167115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 42104218 - 42104165
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42104218 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 42104165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 14620646 - 14620596
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14620646 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 14620596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 2729941 - 2729888
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  2729941 ttgtttcaaaatgaatgtcactttcactttccaatgcaataataactttttctt 2729888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 3025086 - 3025033
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  3025086 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 3025033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 13761555 - 13761608
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  13761555 ttgtttcaaaatgaatgtcactttcacttttcaatgcaataataaatttttctt 13761608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 21319465 - 21319412
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  21319465 ttgtttcaaaatgaatgtcactttcagcttccaatgcaataataactttttctt 21319412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 26660753 - 26660806
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  26660753 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 26660806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 26932346 - 26932399
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  26932346 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 26932399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 35766051 - 35766002
Alignment:
Q  242 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35766051 ttcaaaatgaatgtcactttcagttttcaatacaataataactttttctt 35766002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 39566181 - 39566234
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  39566181 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39566234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 38362291 - 38362243
Alignment:
Q  239 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttt 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38362291 tgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttt 38362243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 291
Target Start/End: Complemental strand, 7580062 - 7579971
Alignment:
Q  200 catttgtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||| |||| |||| |||||||||||||||        |||||| ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  7580062 cattcgttttaaaacgagtgtcgttttagtcaaaataattgttttaaaatgaatgttactttcagttttcaatacaataataactttttctt 7579971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 27797786 - 27797832
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  27797786 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 27797832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 210 - 288
Target Start/End: Original strand, 7721066 - 7721144
Alignment:
Q  210 aaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||||||||| ||       |||||||||||||||| |||||||  |||||||||||||||||||||||||    
T  7721066 aaaatgagtgtcgttttaattaaaaaaattgtttcaaaatgaatatcactttatgttttcaatgcaataataacttttt 7721144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 9066578 - 9066525
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  9066578 ttgtttcaaaatgaatgttactttcagttttcaatgcaataataaaattttctt 9066525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 24280991 - 24281044
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  24280991 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttctt 24281044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 24381221 - 24381168
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  24381221 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttctt 24381168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 34446182 - 34446129
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |||||||    
T  34446182 ttgtttcaaaatgaatgtcattttcagttttcaatacaataataacattttctt 34446129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 3306157 - 3306111
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  3306157 aaaatgaatgtcactttcagtttccaatgcaataataattttttctt 3306111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 4630870 - 4630916
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||    
T  4630870 aaaataaatgtcactttcagttttcaatacaataataactttttctt 4630916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 39504720 - 39504774
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaa-taataactttttctt 291  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  39504720 ttgttttaaaatgaatgtcactttcagtttccaatgcaattaataactttttctt 39504774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 39729960 - 39730010
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  39729960 tttcaaaatgaatgttattttcagtttccaatgcaataataactttttctt 39730010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 43584532 - 43584482
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  43584532 ttgttttaaaatgaatgtcgttttcagttttcaatgcaataataacttttt 43584482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 25362955 - 25362902
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||| |||||||||||  ||||||||||| ||||||||||    
T  25362955 ttgtttcaaaatgaatgttactttcagtttcgaatgcaataatgactttttctt 25362902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 36073785 - 36073732
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||| |||||||||||| ||| | |||||||||||||||||||||||||||    
T  36073785 ttgtttctaaatgaatgtcattttaaattttcaatgcaataataactttttctt 36073732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 283
Target Start/End: Complemental strand, 42978254 - 42978176
Alignment:
Q  205 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataac 283  Q
    |||| ||||||||||||||||||| |        ||||| ||||||||| |||||||||||||||||||||||||||||    
T  42978254 gttttaaaatgagtgtcgttttagctaaaaaaaatgttttaaaatgaatatcactttcagttttcaatgcaataataac 42978176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 8336561 - 8336517
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataactt 285  Q
    |||||||||||||||||||| || |||||||||||||||||||||    
T  8336561 tttcaaaatgaatgtcacttccatttttcaatgcaataataactt 8336517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 34209052 - 34208999
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttc---aatgcaataataacttttt 288  Q
    |||||||||||||||||||||||||||||| |   |||||||||||||||||||    
T  34209052 ttgtttcaaaatgaatgtcactttcagtttccaataatgcaataataacttttt 34208999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 276
Target Start/End: Complemental strand, 21375839 - 21375768
Alignment:
Q  205 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaa 276  Q
    ||||||||||||||||||||||||         |||||| ||||| ||||||||||||||||||||||||||    
T  21375839 gtttcaaaatgagtgtcgttttagccaaaaaaattgttttaaaataaatgtcactttcagttttcaatgcaa 21375768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 36164892 - 36164938
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||||||    
T  36164892 aaaatgaatgtcattttcagtttccaatgcagtaataactttttctt 36164938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 843019 - 843060
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataa 279  Q
    ||||||| |||||||||||||||||||||| |||||||||||    
T  843019 ttgtttcgaaatgaatgtcactttcagtttgcaatgcaataa 843060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 4911305 - 4911252
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||| ||||||||||| ||||| ||||| ||||||| |||||||||    
T  4911305 ttgtttcaaaataaatgtcacttttagtttccaatgtaataatacctttttctt 4911252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 11977590 - 11977639
Alignment:
Q  242 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||| |||||||||||||||||| |||| | ||||||||||||||||    
T  11977590 ttcaaaacgaatgtcactttcagtttccaataccataataactttttctt 11977639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 40776720 - 40776681
Alignment:
Q  249 tgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  40776720 tgaatgtcactttcatttttcaatgtaataataacttttt 40776681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 21195380 - 21195430
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||| ||||| ||| ||||| |||||||||||||| ||||||||    
T  21195380 tttcaaaatgattgtcaatttaagtttccaatgcaataataattttttctt 21195430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 25768580 - 25768538
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttt 287  Q
    |||||| |||||||||||||||||||||| |||| ||||||||    
T  25768580 aaaatggatgtcactttcagttttcaatgtaatattaactttt 25768538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 283
Target Start/End: Original strand, 31041932 - 31041970
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataac 283  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  31041932 aaaatgattgtcactttcagtttccaatgcaataataac 31041970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 291
Target Start/End: Original strand, 27600417 - 27600450
Alignment:
Q  258 ctttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||| |||||||||||||||||||||||    
T  27600417 ctttcagtttccaatgcaataataactttttctt 27600450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 38369871 - 38369923
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||| ||||||| | ||| |||||||||||||||||||||||    
T  38369871 ttgttttaaaatgaatatcactttta-tttccaatgcaataataactttttctt 38369923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 39804203 - 39804166
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgca 275  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  39804203 ttgtttcaaaatgaatatcactttcagtttccaatgca 39804166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 291
Target Start/End: Original strand, 14005911 - 14005943
Alignment:
Q  259 tttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||| |||||||||||||||||||||||    
T  14005911 tttcagtttccaatgcaataataactttttctt 14005943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 441386 - 441333
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  441386 ttgtttcaaaatgaatgtcactttctgttttcaatgcaataataactttttctt 441333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 18579165 - 18579218
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18579165 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 18579218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 43427442 - 43427389
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43427442 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 43427389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 43971502 - 43971555
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43971502 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 43971555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 4133022 - 4133075
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  4133022 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 4133075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 12342091 - 12342144
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  12342091 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 12342144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 16792481 - 16792534
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  16792481 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttctt 16792534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 17703017 - 17703070
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  17703017 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 17703070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 18719579 - 18719534
Alignment:
Q  246 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18719579 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 18719534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 29396835 - 29396782
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  29396835 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 29396782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 29808810 - 29808863
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  29808810 ttgttttaaaatgaatgtcactttcagttttcaatgcaatcataactttttctt 29808863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 45301763 - 45301816
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  45301763 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 45301816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 285
Target Start/End: Original strand, 38926604 - 38926651
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactt 285  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  38926604 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactt 38926651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 4051859 - 4051809
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  4051859 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttt 4051809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 12566135 - 12566085
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  12566135 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttt 12566085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 16463180 - 16463134
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  16463180 aaaataaatgtcactttcagttttcaatgcaataataactttttctt 16463134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 28072565 - 28072615
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  28072565 ttgttttaaaatgaatgtcactttcagttttcaatacaataataacttttt 28072615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 35799201 - 35799251
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  35799201 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataacttttt 35799251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 36177974 - 36178024
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  36177974 ttgtttcaaaatgaatgtcactttccgtttccaatgcaataataacttttt 36178024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 4469499 - 4469552
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||    
T  4469499 ttgttttaaaatgaatttcactttcagttttcaatacaataataactttttctt 4469552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 6220559 - 6220506
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  6220559 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 6220506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 13561992 - 13562045
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||| |||||||||||||||||  ||||||||||||||||||||||    
T  13561992 ttgtttcaaaataaatgtcactttcagtttctaatgcaataataactttttctt 13562045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 14833890 - 14833837
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  14833890 ttgttttaaaatgaatgtcactttcaattttcaatgcaacaataactttttctt 14833837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 22620489 - 22620436
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||| |||| |||||||||| |||||||||||||||||||||||    
T  22620489 ttgtttcaaaatgagtgtcgctttcagtttccaatgcaataataactttttctt 22620436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 29411694 - 29411747
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||| |||||||    
T  29411694 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataaccttttctt 29411747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 34546486 - 34546433
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||    
T  34546486 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataattttttctt 34546433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 5717512 - 5717564
Alignment:
Q  239 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  5717512 tgttttaaaatgaatgtcactttcagtttccaatgcaataataaatttttctt 5717564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 11188644 - 11188600
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataactt 285  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  11188644 tttcaaaatgaatgtcactttcagttttcaatgcaacaataactt 11188600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 27964524 - 27964472
Alignment:
Q  239 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||||||||||    
T  27964524 tgtttcgaaatgaatgtcacttttagtttccaatgcaataataactttttctt 27964472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 9391710 - 9391660
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  9391710 tttcaaaatgaatgtcattttcagtttttaatgcaataataattttttctt 9391660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 12394076 - 12394026
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  12394076 ttgtttcaaaatgaatgttactttcagtttctaatgcaataataacttttt 12394026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 45082052 - 45082002
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||| ||||||||||||||||||||| |||||||||||||| ||||||||    
T  45082052 tttcacaatgaatgtcactttcagtttccaatgcaataataattttttctt 45082002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 7028967 - 7028914
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||| ||||| ||| |||||||||||| ||||||||||    
T  7028967 ttgtttcaaaatgaatgtcattttcactttccaatgcaataatgactttttctt 7028914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 16807672 - 16807619
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||    
T  16807672 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttctt 16807619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 16846953 - 16846900
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||    
T  16846953 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttctt 16846900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 17695980 - 17695927
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||| ||||||||||||||| |||||  ||||||||||||||||    
T  17695980 ttgtttcaaaatgagtgtcactttcagtttccaatgtgataataactttttctt 17695927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 25383639 - 25383586
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||| | ||||||||| |||||||||||||||||||||||    
T  25383639 ttgttttaaaatgaatgttattttcagtttccaatgcaataataactttttctt 25383586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 32228166 - 32228113
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||||||||||||  ||||| ||||||||||||||||||||||    
T  32228166 ttgttttaaaatgaatgtcacttttggttttaaatgcaataataactttttctt 32228113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 37038921 - 37038880
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataa 279  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  37038921 ttgttttaaaatgaatgtcactttcagttttcaatgcaataa 37038880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 288
Target Start/End: Original strand, 14285939 - 14285986
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||||||||||||||| ||||||||| |||| |||||||||||||||    
T  14285939 tttcaaaatgaatgtcattttcagtttccaatacaataataacttttt 14285986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 287
Target Start/End: Original strand, 30855105 - 30855152
Alignment:
Q  240 gtttcaaaatgaatgtcactttcagttttcaatgcaataataactttt 287  Q
    |||||||||||||||||||| ||||||| |||||||||||||| ||||    
T  30855105 gtttcaaaatgaatgtcactctcagtttccaatgcaataataattttt 30855152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 7644651 - 7644697
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||||    
T  7644651 aaaatgaatgtcactttcagtattcaatataataataactttttctt 7644697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 19164358 - 19164408
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||| || ||||| |||| ||||||||||||||||||||||    
T  19164358 tttcaaaatgaatggcaatttcaatttttaatgcaataataactttttctt 19164408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 27986034 - 27986083
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||| |||||||||||||||||||||||||||| |||||| ||||||||    
T  27986034 ttgttttaaaatgaatgtcactttcagttttcaatacaataa-aacttttt 27986083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 40608751 - 40608706
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  40608751 aaaatgaatgtcactttcag-tttcaatgcaataataactttctctt 40608706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 4288866 - 4288813
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||| |||||| ||||||  ||||||||||||| ||||||||    
T  4288866 ttgtttcaaaatgaatatcacttacagtttctaatgcaataataattttttctt 4288813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 4658388 - 4658335
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||  ||||| ||||||||| |||||||| ||||||||    
T  4658388 ttgtttcaaaatgaatgtctttttcatttttcaatgtaataataattttttctt 4658335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 7042341 - 7042288
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||| ||||| ||  |||||||||||| ||||||||||    
T  7042341 ttgtttcaaaatgaatgtcattttcacttcccaatgcaataatgactttttctt 7042288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 8540036 - 8540089
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||||| || ||||||||| || ||||||||||||||||||||    
T  8540036 ttgttttaaaatgaatgacattttcagtttccagtgcaataataactttttctt 8540089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 35046516 - 35046565
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttt 287  Q
    |||||| || |||||||||||||||| ||| |||||||||||||||||||    
T  35046516 ttgttttaagatgaatgtcactttcaatttccaatgcaataataactttt 35046565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 42753756 - 42753793
Alignment:
Q  251 aatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||||||||||||||| |||||||||||||    
T  42753756 aatgtcactttcagttttcaatgcgataataacttttt 42753793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 43481026 - 43480971
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagt-tttcaatgca-ataataactttttctt 291  Q
    |||||||||||||| ||||| ||||||| |||||||||| ||||||||||||||||    
T  43481026 ttgtttcaaaatgactgtcattttcagtgtttcaatgcatataataactttttctt 43480971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 291
Target Start/End: Original strand, 45423618 - 45423669
Alignment:
Q  240 gtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||| ||||||| ||| | ||||||||| |||||||||||||||||||||||    
T  45423618 gttttaaaatgattgttattttcagtttccaatgcaataataactttttctt 45423669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 10195572 - 10195622
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||| ||||||||||| ||||| | ||||||||||||||||||| ||||    
T  10195572 ttgttttaaaatgaatgttacttttaattttcaatgcaataataacatttt 10195622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 275
Target Start/End: Complemental strand, 34035895 - 34035865
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgca 275  Q
    |||||||||||||||||||||||||||||||    
T  34035895 aaaatgaatgtcactttcagttttcaatgca 34035865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 32254591 - 32254639
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttt 287  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||| ||||    
T  32254591 ttgtttcaaaatgaa-gtcactttcagtttccaatgaaataataattttt 32254639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 33482384 - 33482331
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||| | ||||||||| |||||||  ||||||||    
T  33482384 ttgttttaaaatgaatgtcacttttatttttcaatgtaataatatttttttctt 33482331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 291
Target Start/End: Original strand, 1423206 - 1423242
Alignment:
Q  255 tcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  1423206 tcactttcagttttcaatggaataataacttattctt 1423242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 9366274 - 9366230
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataa 282  Q
    |||||| ||||| ||||||||||| ||||||||||| ||||||||    
T  9366274 ttgttttaaaataaatgtcactttaagttttcaatgaaataataa 9366230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 291
Target Start/End: Original strand, 233997 - 234085
Alignment:
Q  204 tgtttcaaaatgagtgtcgttttagttnnnnnnn-ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||| |        |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  233997 tgtttcaaaatgagtgtcgttttagctaaaaaaaattgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 234085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 4850650 - 4850597
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  4850650 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 4850597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 13504002 - 13503953
Alignment:
Q  239 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13504002 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 13503953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 29399944 - 29399997
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  29399944 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 29399997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 9940646 - 9940695
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttt 287  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  9940646 ttgttttaaaatgattgtcactttcagttttcaatgcaataataactttt 9940695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 18737245 - 18737192
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  18737245 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactctttctt 18737192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 19674982 - 19675031
Alignment:
Q  242 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  19674982 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 19675031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 24163869 - 24163816
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  24163869 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 24163816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 8030643 - 8030693
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||||||    
T  8030643 tttcaaaatgaatgttactttcagttttcaatgtaataataattttttctt 8030693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 12063665 - 12063615
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    ||||||| |||||||||||||||||||||| |||||||||||||| |||||    
T  12063665 ttgtttccaaatgaatgtcactttcagtttccaatgcaataataatttttt 12063615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 287
Target Start/End: Complemental strand, 23259480 - 23259431
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttt 287  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||||||||    
T  23259480 ttgtttcaaaatgaatgtcattttcagtttccaatgcaaaaataactttt 23259431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 29713557 - 29713508
Alignment:
Q  242 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||    
T  29713557 ttcaaaatgaatgtcattttccgtttccaatgcaataataactttttctt 29713508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 31233780 - 31233727
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| |||||||||||||||||||||||||| |||||||||||  |||||||    
T  31233780 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttctt 31233727  T

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Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 32429282 - 32429335
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||| |||||||||||| | ||| |||||||||||||||||||||||    
T  32429282 ttgtttcaaaacgaatgtcacttttaatttccaatgcaataataactttttctt 32429335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 12588531 - 12588579
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttct 293  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  12588531 aaaatgaatgttactttcagtttgcaatgcaataataacttttttttct 12588579  T

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Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 291
Target Start/End: Complemental strand, 10520833 - 10520741
Alignment:
Q  199 ccatttgtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||| ||||| |||||||||||| |||||| |       |||||| ||||| ||||||||||||| |||||||| ||||||||| ||||||||    
T  10520833 ccatctgttttaaaatgagtgtcattttagctaaaaaaattgttttaaaataaatgtcactttcaattttcaatacaataataattttttctt 10520741  T

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Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 281
Target Start/End: Complemental strand, 12323035 - 12322996
Alignment:
Q  242 ttcaaaatgaatgtcactttcagttttcaatgcaataata 281  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  12323035 ttcaaaatgaatgtcactttcagtttccaatgcaataata 12322996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 10540663 - 10540613
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||| ||||    
T  10540663 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataacctttt 10540613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 31443601 - 31443551
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||| ||||||||||| | ||||||||| ||||||||||||||||||||    
T  31443601 ttgtttaaaaatgaatgttattttcagtttccaatgcaataataacttttt 31443551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 21272257 - 21272204
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||| ||||||||||||| ||||| ||||||||| |||||||    
T  21272257 ttgttttaaaatgaatatcactttcagtttccaatgtaataataacattttctt 21272204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 577059 - 577107
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttt 286  Q
    |||||| ||||| | | ||||||||||||||||||||||||||||||||    
T  577059 ttgttttaaaataactatcactttcagttttcaatgcaataataacttt 577107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 19600419 - 19600471
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttct 290  Q
    |||||||||||||||  ||||||| ||||||| |||||||||||| |||||||    
T  19600419 ttgtttcaaaatgaagatcactttaagttttctatgcaataataattttttct 19600471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 17552400 - 17552357
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataata 281  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||    
T  17552400 ttgtttcgaaatgaatgtcattttcagtttccaatgcaataata 17552357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 3988896 - 3988845
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||| |||  |||||||||||| |||||||||||||| ||||||||    
T  3988896 ttgtttcaaaataaat--cactttcagtttccaatgcaataataattttttctt 3988845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 24556076 - 24556030
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||| ||||||| ||||||||||||||| |||||||| ||||||||    
T  24556076 aaaataaatgtcattttcagttttcaatgtaataataattttttctt 24556030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 291
Target Start/End: Complemental strand, 34513739 - 34513705
Alignment:
Q  257 actttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||| |||||||||||||||||||||||    
T  34513739 actttcagtttccaatgcaataataactttttctt 34513705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 12459469 - 12459420
Alignment:
Q  242 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||| ||||  ||| |||||||| |||||||||    
T  12459469 ttcaaaatgaatgtcactttcggtttctaatacaataatatctttttctt 12459420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 32193700 - 32193753
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||| ||||||||||| |||||  ||||||||||||| ||||||||    
T  32193700 ttgttttaaaataaatgtcacttttagtttctaatgcaataataattttttctt 32193753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 3656 - 3606
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  3656 tttcaaaatgaatgtcactttcagtttccaatacaataataactttttctt 3606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 291
Target Start/End: Complemental strand, 1602 - 1515
Alignment:
Q  204 tgtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||| |||||||||||| |        ||||||||||||||||||||||||||||||  |||||||| |||||||||||||    
T  1602 tgtttcaaaataagtgtcgttttaatcaaaaaaattgtttcaaaatgaatgtcactttcagtttctaatgcaatgataactttttctt 1515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 9796 - 9743
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  9796 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 9743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 10110 - 10060
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 288  Q
    |||||| ||||||||||||||||||| |||||||| | ||||||| |||||    
T  10110 ttgttttaaaatgaatgtcactttcaattttcaatactataataatttttt 10060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 18405 - 18356
Alignment:
Q  242 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  18405 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 18356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 62631 - 62684
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||||||||||||||||| | ||| |||||||||||||||||    
T  62631 ttgtttcaaaatgaatgtcactttcagtttcctatgtaataataactttttctt 62684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 661 - 615
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  661 aaaatgaatgtcactttcagtttccaatgcaataataattttttctt 615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 75454 - 75410
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataa 282  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||    
T  75454 ttgtttcaaaatgaatgtcacattcagttttcaaagcaataataa 75410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 719 - 673
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||||||||||| || ||| |||||||||||||||||||||||    
T  719 aaaatgaatgtcacttacaatttccaatgcaataataactttttctt 673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 4566 - 4616
Alignment:
Q  241 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||||||||||||||||| | |||| ||||||||||||| ||||||||    
T  4566 tttcaaaatgaatgtcacttttaatttttaatgcaataataattttttctt 4616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 841 - 788
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    |||||||| ||||||||||||||||||||| || || |||||||| ||||||||    
T  841 ttgtttcacaatgaatgtcactttcagtttccactggaataataattttttctt 788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 289
Target Start/End: Original strand, 153311 - 153362
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttc 289  Q
    |||| ||||||||||||||| ||||| ||||||||||||| |||||| ||||    
T  153311 ttgtgtcaaaatgaatgtcattttcaattttcaatgcaatgataactatttc 153362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 21229 - 21183
Alignment:
Q  245 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 291  Q
    ||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  21229 aaaatgactgtcactttcagtttcaaatgcaataataattttttctt 21183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 45392 - 45425
Alignment:
Q  238 ttgtttcaaaatgaatgtcactttcagttttcaa 271  Q
    |||||||||||||||||||||||||||| |||||    
T  45392 ttgtttcaaaatgaatgtcactttcagtgttcaa 45425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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