View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7849_low_11 (Length: 284)
Name: NF7849_low_11
Description: NF7849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7849_low_11 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 18 - 284
Target Start/End: Original strand, 12225727 - 12225993
Alignment:
| Q |
18 |
tcaaggaggatctgaacaggtggagtacctaagggaaattctaaaagatcatttagataaaagatatgatagctctacattgactgaggtaaagtgatca |
117 |
Q |
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| T |
12225727 |
tcaaggaggatctgaacaggtggagtacctaagggaaattctaaaagatcatttagataaaaaatatgatagctctacattgactgaggtaaagtgatca |
12225826 |
T |
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| Q |
118 |
ttcaacgttttttgcgaggtatcgggggttctgtacgtttaagttgttatgcttctttaagaaattttagtgaagccttgtatatttgttagacagaaat |
217 |
Q |
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| T |
12225827 |
ttcaacgttttttgcgaggtatcgggggttctgtatgtttaagttgttatgcttctttaagaaattttagtgaagccttgtatatttgttagacggaaat |
12225926 |
T |
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| Q |
218 |
ttaaacagctttgcgctccttactatcattgatataaaagaactcgagagagatgtcaataacctca |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
12225927 |
ttaaacagctttgcgctccttactatcattgatataaaagaactcgagagaaatgtcaataacctca |
12225993 |
T |
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