View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_115 (Length: 349)
Name: NF7850A_low_115
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_115 |
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Alignment Details
Target: chr6 (Bit Score: 176; Significance: 9e-95; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 106 - 330
Target Start/End: Complemental strand, 7326710 - 7326495
Alignment:
| Q |
106 |
cttggtttttaagtggaataaatagtttgataaattgcttattatatttcttttggactgaaaattgaatgtaatgatgttattattacattcaaatctc |
205 |
Q |
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| T |
7326710 |
cttggtttttaagtggaataaatagtttgataaattgcttattatatttcttttggactgaaaattgaatgtaatgtt--tattattacatgcaaatctc |
7326613 |
T |
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| Q |
206 |
ctttgttgctatttgttttatgaacatttgtctaaatttgttacattacatgtatgtatgtagctaactgacatgaagggataaaactatccttatttat |
305 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |
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| T |
7326612 |
ctttgttgctatttgttttatgaacatttgtctaaatttgttacattacatgtatgtat-------actgacatgaagggataaaattatccttatttat |
7326520 |
T |
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| Q |
306 |
gtcatggaaaaaacatttactgatg |
330 |
Q |
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||||||||||||||||||||||||| |
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| T |
7326519 |
gtcatggaaaaaacatttactgatg |
7326495 |
T |
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