View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_176 (Length: 306)
Name: NF7850A_low_176
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_176 |
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Alignment Details
Target: chr1 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 41734893 - 41735184
Alignment:
| Q |
1 |
tgagtacctgttagaatgaagaaaagaataagccaagggagaagagtgattattttcactaatagattttgcttcatcatattatgatcagtggcagatt |
100 |
Q |
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| T |
41734893 |
tgagtacctgttataatgaagaaaagaataagccaagggagaagagtgattattttcactaatagattttgcttcatcatattatgatcagtggcagatt |
41734992 |
T |
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| Q |
101 |
gaattggtgatgtcaaggtggatggtaaaagtgtataaatactctaccaaggttggcatatggtagattaccaatctg---attaggccaactatatatt |
197 |
Q |
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| T |
41734993 |
gaattggtgatgtcaagatggatggtaaaagtgtataaatactctaccaaggttggcatatggtagattaccaatctgatcattaggccaactatatatt |
41735092 |
T |
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| Q |
198 |
gaattggtgtgaagaatatatgactatcgcccatcactagtgaaaaatgggaattacaagataaaagacattttcgcaattaaattgatgtc |
289 |
Q |
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| T |
41735093 |
gaattggtgtgaagaatatatgactatcgcccatcactagtgcaaaatgggaattacaagataaaagacattttcgcaattaaattgatgtc |
41735184 |
T |
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