View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7850A_low_20 (Length: 492)

Name: NF7850A_low_20
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7850A_low_20
NF7850A_low_20
[»] chr7 (70 HSPs)
chr7 (19-312)||(23859661-23859954)
chr7 (251-428)||(24339597-24339774)
chr7 (347-434)||(23859954-23860041)
chr7 (436-492)||(23860501-23860557)
chr7 (325-428)||(11061077-11061180)
chr7 (319-428)||(1433409-1433518)
chr7 (257-428)||(5409775-5409940)
chr7 (324-428)||(25481857-25481961)
chr7 (319-424)||(7328686-7328791)
chr7 (319-428)||(13770646-13770755)
chr7 (324-403)||(15680789-15680868)
chr7 (298-402)||(32308101-32308205)
chr7 (262-365)||(2334268-2334370)
chr7 (318-428)||(22602704-22602814)
chr7 (319-363)||(15902842-15902886)
chr7 (324-368)||(18213033-18213077)
chr7 (324-424)||(21826232-21826332)
chr7 (320-424)||(27945000-27945104)
chr7 (320-403)||(18215182-18215265)
chr7 (326-428)||(17851386-17851488)
chr7 (325-407)||(19206026-19206108)
chr7 (319-363)||(16341516-16341560)
chr7 (298-426)||(26329356-26329484)
chr7 (325-368)||(640128-640171)
chr7 (327-390)||(2948676-2948739)
chr7 (324-363)||(3721113-3721152)
chr7 (320-418)||(5235951-5236049)
chr7 (319-418)||(7438671-7438770)
chr7 (257-428)||(9778463-9778620)
chr7 (262-365)||(26033399-26033502)
chr7 (324-407)||(26733280-26733363)
chr7 (320-363)||(27229307-27229350)
chr7 (326-396)||(41020483-41020553)
chr7 (320-407)||(43027465-43027552)
chr7 (323-365)||(9408333-9408375)
chr7 (319-365)||(18039017-18039063)
chr7 (321-407)||(49107797-49107882)
chr7 (300-397)||(6630888-6630985)
chr7 (320-365)||(18013070-18013115)
chr7 (320-428)||(21140978-21141086)
chr7 (326-363)||(27093415-27093452)
chr7 (326-363)||(27184849-27184886)
chr7 (323-396)||(35861951-35862024)
chr7 (319-363)||(5548696-5548740)
chr7 (319-363)||(8160436-8160480)
chr7 (321-405)||(10042915-10042999)
chr7 (298-390)||(11665414-11665506)
chr7 (319-363)||(17307913-17307957)
chr7 (324-396)||(20549778-20549850)
chr7 (325-397)||(22484011-22484083)
chr7 (325-365)||(38143241-38143281)
chr7 (324-368)||(39138459-39138503)
chr7 (320-363)||(5233649-5233692)
chr7 (332-407)||(5956249-5956324)
chr7 (324-363)||(9482954-9482993)
chr7 (324-407)||(24105654-24105737)
chr7 (343-434)||(29763193-29763284)
chr7 (319-365)||(2845004-2845050)
chr7 (308-362)||(3142062-3142116)
chr7 (325-363)||(5835267-5835305)
chr7 (323-365)||(21560521-21560563)
chr7 (319-365)||(32094015-32094061)
chr7 (308-365)||(11272570-11272629)
chr7 (257-305)||(14729770-14729818)
chr7 (323-363)||(19992021-19992061)
chr7 (320-400)||(21930612-21930691)
chr7 (331-363)||(22868062-22868094)
chr7 (338-398)||(29787383-29787443)
chr7 (319-355)||(33384577-33384613)
chr7 (325-365)||(42720891-42720931)
[»] chr6 (77 HSPs)
chr6 (257-428)||(16766652-16766823)
chr6 (257-428)||(18367792-18367962)
chr6 (250-428)||(9107296-9107474)
chr6 (325-428)||(7938071-7938174)
chr6 (321-418)||(3398584-3398680)
chr6 (257-424)||(8365452-8365619)
chr6 (257-390)||(16488523-16488656)
chr6 (324-428)||(5732510-5732614)
chr6 (320-427)||(9027134-9027241)
chr6 (324-428)||(7977830-7977934)
chr6 (324-428)||(8776973-8777077)
chr6 (257-428)||(10339058-10339230)
chr6 (265-424)||(12696284-12696436)
chr6 (257-428)||(17327594-17327759)
chr6 (320-407)||(10770670-10770757)
chr6 (324-428)||(426514-426618)
chr6 (324-403)||(17841589-17841668)
chr6 (319-390)||(26562682-26562753)
chr6 (324-419)||(34595098-34595193)
chr6 (326-407)||(9658855-9658936)
chr6 (325-423)||(13851696-13851794)
chr6 (323-396)||(6214547-6214620)
chr6 (319-391)||(8931597-8931669)
chr6 (320-363)||(7086815-7086858)
chr6 (320-363)||(9025490-9025533)
chr6 (320-415)||(19044432-19044527)
chr6 (323-434)||(24115846-24115957)
chr6 (324-403)||(28152079-28152157)
chr6 (330-428)||(1681713-1681811)
chr6 (324-398)||(7265593-7265667)
chr6 (321-363)||(9195751-9195793)
chr6 (324-390)||(33001289-33001355)
chr6 (324-365)||(7027260-7027301)
chr6 (330-403)||(10842512-10842585)
chr6 (324-424)||(853859-853959)
chr6 (324-396)||(7801156-7801228)
chr6 (264-363)||(9629403-9629502)
chr6 (257-365)||(31384938-31385045)
chr6 (324-420)||(3209345-3209441)
chr6 (322-365)||(7151430-7151473)
chr6 (324-390)||(7377972-7378038)
chr6 (298-428)||(10294062-10294192)
chr6 (319-421)||(10888969-10889071)
chr6 (324-390)||(19040345-19040411)
chr6 (306-428)||(21395290-21395411)
chr6 (257-362)||(7248379-7248484)
chr6 (326-407)||(16833284-16833365)
chr6 (326-363)||(26178683-26178720)
chr6 (321-365)||(7973672-7973716)
chr6 (323-363)||(9617454-9617494)
chr6 (319-363)||(34073342-34073386)
chr6 (303-390)||(5970087-5970174)
chr6 (324-403)||(7996378-7996457)
chr6 (324-403)||(8022344-8022423)
chr6 (298-365)||(9522909-9522976)
chr6 (319-362)||(16111752-16111795)
chr6 (325-360)||(32298608-32298643)
chr6 (330-424)||(6389702-6389796)
chr6 (320-398)||(7930290-7930368)
chr6 (303-365)||(8713998-8714060)
chr6 (320-362)||(9911524-9911566)
chr6 (325-363)||(13360373-13360411)
chr6 (324-365)||(403864-403905)
chr6 (324-365)||(1700370-1700411)
chr6 (374-435)||(11352307-11352368)
chr6 (330-363)||(11591876-11591909)
chr6 (324-365)||(12627577-12627618)
chr6 (320-365)||(18252747-18252792)
chr6 (324-390)||(32978899-32978966)
chr6 (319-368)||(33925030-33925079)
chr6 (324-420)||(6898281-6898377)
chr6 (320-363)||(8805570-8805611)
chr6 (331-363)||(17302367-17302399)
chr6 (316-356)||(20576625-20576665)
chr6 (324-360)||(21924935-21924971)
chr6 (336-368)||(32248937-32248969)
chr6 (319-363)||(32320664-32320708)
[»] chr8 (56 HSPs)
chr8 (244-434)||(22651925-22652115)
chr8 (257-428)||(29510237-29510408)
chr8 (257-398)||(15816062-15816203)
chr8 (252-363)||(26902103-26902214)
chr8 (298-428)||(2572030-2572160)
chr8 (257-363)||(34450965-34451076)
chr8 (265-368)||(18964192-18964297)
chr8 (319-424)||(13436959-13437064)
chr8 (325-421)||(22197743-22197839)
chr8 (324-428)||(27101470-27101573)
chr8 (324-407)||(20873045-20873128)
chr8 (252-418)||(11927014-11927180)
chr8 (316-418)||(11944630-11944732)
chr8 (298-427)||(24362175-24362305)
chr8 (325-425)||(31556955-31557054)
chr8 (308-408)||(36934645-36934745)
chr8 (308-427)||(4673409-4673528)
chr8 (327-418)||(25192350-25192441)
chr8 (325-407)||(4298887-4298969)
chr8 (324-390)||(13844596-13844662)
chr8 (251-360)||(29447467-29447576)
chr8 (322-390)||(39954277-39954345)
chr8 (324-363)||(4786338-4786377)
chr8 (323-414)||(8343285-8343376)
chr8 (324-395)||(24613509-24613579)
chr8 (308-363)||(25172682-25172737)
chr8 (324-363)||(33405384-33405423)
chr8 (323-365)||(8342990-8343032)
chr8 (324-362)||(8847277-8847315)
chr8 (265-358)||(16641921-16642008)
chr8 (321-383)||(25566841-25566903)
chr8 (257-363)||(29447043-29447149)
chr8 (324-428)||(926788-926892)
chr8 (323-370)||(7472514-7472562)
chr8 (321-357)||(16867202-16867238)
chr8 (324-396)||(22595981-22596053)
chr8 (320-428)||(28384990-28385098)
chr8 (319-363)||(34222967-34223011)
chr8 (332-363)||(14731732-14731763)
chr8 (327-390)||(31236580-31236643)
chr8 (324-363)||(34897105-34897144)
chr8 (324-403)||(36450754-36450833)
chr8 (324-390)||(5813585-5813651)
chr8 (321-363)||(11803279-11803321)
chr8 (325-363)||(14134719-14134757)
chr8 (324-406)||(18170482-18170564)
chr8 (324-406)||(18634050-18634132)
chr8 (257-383)||(21465412-21465538)
chr8 (326-368)||(22493509-22493551)
chr8 (329-407)||(27213523-27213601)
chr8 (319-365)||(29357995-29358041)
chr8 (320-398)||(30271287-30271365)
chr8 (257-314)||(3025609-3025666)
chr8 (324-365)||(4948670-4948711)
chr8 (310-355)||(14634127-14634172)
chr8 (319-355)||(12402686-12402722)
[»] scaffold0003 (2 HSPs)
scaffold0003 (251-419)||(241558-241726)
scaffold0003 (325-365)||(348120-348160)
[»] chr2 (64 HSPs)
chr2 (251-427)||(34784909-34785085)
chr2 (257-390)||(36096308-36096441)
chr2 (257-355)||(35056896-35056994)
chr2 (264-421)||(15657826-15657983)
chr2 (324-407)||(20242727-20242810)
chr2 (322-424)||(20539672-20539774)
chr2 (328-424)||(6940214-6940310)
chr2 (250-390)||(26769504-26769644)
chr2 (324-428)||(30335372-30335476)
chr2 (252-403)||(11223792-11223942)
chr2 (257-404)||(30717463-30717610)
chr2 (321-427)||(36756341-36756447)
chr2 (324-405)||(31018568-31018649)
chr2 (257-398)||(37419728-37419869)
chr2 (324-423)||(21624226-21624326)
chr2 (325-407)||(18841014-18841096)
chr2 (292-362)||(28524447-28524517)
chr2 (265-362)||(41843462-41843553)
chr2 (324-428)||(18421919-18422022)
chr2 (324-418)||(19536397-19536492)
chr2 (339-428)||(21374714-21374798)
chr2 (250-363)||(32749751-32749864)
chr2 (324-368)||(20922928-20922972)
chr2 (332-428)||(21616717-21616813)
chr2 (252-324)||(24009343-24009415)
chr2 (319-363)||(30527590-30527634)
chr2 (319-390)||(12668418-12668489)
chr2 (319-403)||(14996218-14996303)
chr2 (319-398)||(24894374-24894453)
chr2 (324-403)||(37558957-37559036)
chr2 (299-365)||(4207875-4207940)
chr2 (324-362)||(5367213-5367251)
chr2 (326-403)||(31808057-31808134)
chr2 (298-428)||(34337155-34337280)
chr2 (321-363)||(44860340-44860382)
chr2 (295-427)||(18054774-18054907)
chr2 (324-388)||(2438719-2438783)
chr2 (321-397)||(15909629-15909705)
chr2 (327-403)||(23718006-23718082)
chr2 (327-403)||(24105678-24105754)
chr2 (324-388)||(28677904-28677967)
chr2 (333-368)||(2665897-2665932)
chr2 (325-428)||(18276476-18276579)
chr2 (320-363)||(18622626-18622669)
chr2 (324-407)||(28596448-28596528)
chr2 (324-403)||(30404850-30404929)
chr2 (324-363)||(34691805-34691844)
chr2 (324-363)||(34714217-34714256)
chr2 (325-407)||(36409630-36409710)
chr2 (325-363)||(18889592-18889630)
chr2 (319-365)||(23058437-23058483)
chr2 (298-360)||(27286266-27286328)
chr2 (326-427)||(31284004-31284106)
chr2 (319-365)||(33153442-33153488)
chr2 (325-363)||(38355888-38355926)
chr2 (324-405)||(15972851-15972932)
chr2 (324-365)||(18255980-18256021)
chr2 (309-422)||(18420419-18420532)
chr2 (331-368)||(28602355-28602392)
chr2 (324-397)||(38117159-38117232)
chr2 (326-363)||(39279695-39279732)
chr2 (321-396)||(21782817-21782890)
chr2 (338-422)||(28412311-28412395)
chr2 (325-365)||(40361755-40361795)
[»] chr5 (60 HSPs)
chr5 (257-428)||(6401453-6401624)
chr5 (298-428)||(21522705-21522835)
chr5 (298-428)||(21533271-21533401)
chr5 (320-428)||(13287395-13287503)
chr5 (266-428)||(19579656-19579818)
chr5 (257-390)||(21814254-21814387)
chr5 (257-398)||(39698526-39698667)
chr5 (308-424)||(37328828-37328944)
chr5 (324-427)||(16203795-16203898)
chr5 (257-399)||(3966487-3966629)
chr5 (324-426)||(21191056-21191158)
chr5 (257-368)||(19452999-19453110)
chr5 (298-428)||(21541985-21542115)
chr5 (253-428)||(36642692-36642865)
chr5 (257-363)||(14873537-14873637)
chr5 (337-424)||(22013373-22013460)
chr5 (292-363)||(41091225-41091296)
chr5 (329-403)||(14674249-14674323)
chr5 (319-420)||(19552540-19552639)
chr5 (324-428)||(15382432-15382538)
chr5 (262-397)||(31084309-31084438)
chr5 (298-397)||(11685925-11686023)
chr5 (297-363)||(18592093-18592159)
chr5 (324-390)||(33178018-33178084)
chr5 (321-363)||(36838563-36838605)
chr5 (324-390)||(42029745-42029811)
chr5 (324-417)||(6247588-6247681)
chr5 (316-428)||(15410440-15410552)
chr5 (269-385)||(7677703-7677819)
chr5 (324-364)||(43564900-43564940)
chr5 (257-324)||(21576689-21576756)
chr5 (319-397)||(6035469-6035546)
chr5 (321-363)||(6471886-6471928)
chr5 (331-397)||(27144449-27144515)
chr5 (320-397)||(2436908-2436985)
chr5 (319-416)||(22423807-22423904)
chr5 (326-422)||(17123009-17123105)
chr5 (257-305)||(17593667-17593715)
chr5 (328-368)||(39758287-39758327)
chr5 (338-428)||(6770498-6770588)
chr5 (323-398)||(10298554-10298629)
chr5 (324-407)||(14422880-14422961)
chr5 (337-372)||(25978983-25979018)
chr5 (324-363)||(28588674-28588713)
chr5 (253-390)||(30098978-30099104)
chr5 (324-363)||(30502388-30502427)
chr5 (324-363)||(30542731-30542770)
chr5 (325-400)||(42893343-42893418)
chr5 (319-401)||(21351900-21351982)
chr5 (319-357)||(24037750-24037788)
chr5 (339-428)||(6326312-6326401)
chr5 (324-365)||(15884006-15884047)
chr5 (320-365)||(16374338-16374383)
chr5 (326-363)||(23012410-23012447)
chr5 (326-363)||(23221003-23221040)
chr5 (326-363)||(25652306-25652343)
chr5 (339-428)||(41995426-41995515)
chr5 (319-363)||(19429452-19429496)
chr5 (262-302)||(32426834-32426874)
chr5 (335-363)||(35017057-35017085)
[»] chr1 (90 HSPs)
chr1 (251-421)||(5944243-5944415)
chr1 (257-390)||(25934609-25934742)
chr1 (265-428)||(1486656-1486813)
chr1 (257-428)||(47989453-47989623)
chr1 (308-407)||(5376484-5376583)
chr1 (257-420)||(40917714-40917875)
chr1 (308-427)||(6612155-6612274)
chr1 (331-428)||(398772-398869)
chr1 (257-363)||(9828064-9828170)
chr1 (262-407)||(34315688-34315833)
chr1 (319-428)||(38503275-38503384)
chr1 (303-363)||(44482250-44482310)
chr1 (329-428)||(10577740-10577839)
chr1 (324-403)||(46348383-46348462)
chr1 (257-363)||(6414935-6415040)
chr1 (321-422)||(15323124-15323225)
chr1 (324-397)||(22881616-22881689)
chr1 (257-390)||(32461397-32461529)
chr1 (298-363)||(34371733-34371798)
chr1 (298-406)||(9629874-9629982)
chr1 (324-388)||(39953146-39953210)
chr1 (324-428)||(42359449-42359553)
chr1 (319-390)||(113292-113363)
chr1 (321-424)||(10572586-10572689)
chr1 (339-427)||(13011230-13011319)
chr1 (308-363)||(25361906-25361961)
chr1 (257-403)||(18556389-18556535)
chr1 (324-390)||(22515887-22515953)
chr1 (321-363)||(25272502-25272544)
chr1 (325-403)||(36878441-36878519)
chr1 (329-407)||(48450592-48450670)
chr1 (324-428)||(9709775-9709879)
chr1 (339-407)||(14359537-14359604)
chr1 (324-368)||(30749855-30749899)
chr1 (324-368)||(30771306-30771350)
chr1 (319-363)||(34712378-34712422)
chr1 (324-428)||(38078661-38078760)
chr1 (324-424)||(39130767-39130867)
chr1 (324-403)||(52903229-52903308)
chr1 (325-428)||(2896122-2896225)
chr1 (320-407)||(6427326-6427413)
chr1 (320-363)||(7918207-7918250)
chr1 (326-365)||(13997901-13997940)
chr1 (324-363)||(14332642-14332681)
chr1 (320-363)||(20157346-20157389)
chr1 (303-428)||(31694689-31694814)
chr1 (265-340)||(41597422-41597497)
chr1 (324-397)||(13436444-13436517)
chr1 (308-370)||(15449216-15449278)
chr1 (320-390)||(24577182-24577252)
chr1 (319-365)||(35919271-35919317)
chr1 (324-398)||(37598817-37598890)
chr1 (325-398)||(1815242-1815315)
chr1 (326-363)||(1864882-1864919)
chr1 (324-365)||(7353493-7353534)
chr1 (298-363)||(12713301-12713366)
chr1 (298-363)||(12717392-12717457)
chr1 (326-407)||(21378554-21378635)
chr1 (325-372)||(2784566-2784614)
chr1 (325-365)||(5898267-5898307)
chr1 (321-365)||(16164312-16164356)
chr1 (301-365)||(28273065-28273129)
chr1 (321-365)||(48148034-48148078)
chr1 (325-420)||(16927186-16927281)
chr1 (324-390)||(19058856-19058922)
chr1 (343-426)||(21366039-21366122)
chr1 (324-390)||(29163381-29163447)
chr1 (328-363)||(34257914-34257949)
chr1 (324-363)||(40181891-40181930)
chr1 (321-368)||(45534187-45534234)
chr1 (328-428)||(48040465-48040566)
chr1 (320-390)||(1704988-1705058)
chr1 (320-358)||(2218264-2218302)
chr1 (324-398)||(9103625-9103698)
chr1 (320-420)||(15641028-15641126)
chr1 (325-407)||(23636050-23636132)
chr1 (324-398)||(31672895-31672969)
chr1 (321-370)||(6332683-6332732)
chr1 (326-363)||(10233273-10233310)
chr1 (333-390)||(12443469-12443526)
chr1 (339-428)||(16297298-16297387)
chr1 (330-363)||(17705592-17705625)
chr1 (324-365)||(18337347-18337388)
chr1 (324-365)||(51410043-51410084)
chr1 (257-365)||(6427482-6427590)
chr1 (321-365)||(12611984-12612028)
chr1 (324-363)||(29229481-29229521)
chr1 (325-365)||(40258934-40258974)
chr1 (324-428)||(41877470-41877574)
chr1 (319-363)||(44296490-44296533)
[»] chr3 (67 HSPs)
chr3 (257-396)||(4987224-4987363)
chr3 (325-428)||(10268487-10268590)
chr3 (292-428)||(15796262-15796398)
chr3 (266-407)||(25064885-25065024)
chr3 (257-390)||(34185056-34185189)
chr3 (324-428)||(16000016-16000120)
chr3 (299-390)||(14209106-14209197)
chr3 (244-419)||(41961570-41961745)
chr3 (330-428)||(35994744-35994841)
chr3 (322-419)||(28917965-28918062)
chr3 (324-428)||(10335286-10335390)
chr3 (324-428)||(38731173-38731277)
chr3 (297-396)||(11665931-11666030)
chr3 (257-390)||(35222931-35223053)
chr3 (324-418)||(8587021-8587115)
chr3 (324-418)||(55401040-55401134)
chr3 (324-424)||(8383216-8383316)
chr3 (321-365)||(15314873-15314917)
chr3 (321-408)||(28678278-28678365)
chr3 (298-428)||(750592-750723)
chr3 (319-397)||(14829676-14829753)
chr3 (324-434)||(25093451-25093561)
chr3 (320-386)||(27505243-27505309)
chr3 (321-426)||(4990964-4991069)
chr3 (324-365)||(7928468-7928509)
chr3 (324-365)||(40993335-40993376)
chr3 (323-383)||(1509539-1509599)
chr3 (319-363)||(11313795-11313839)
chr3 (320-397)||(14747547-14747625)
chr3 (319-403)||(25948882-25948966)
chr3 (298-386)||(55212960-55213047)
chr3 (268-355)||(8039779-8039866)
chr3 (324-363)||(49505154-49505193)
chr3 (342-428)||(3164043-3164129)
chr3 (251-365)||(16789030-16789143)
chr3 (321-419)||(39001996-39002094)
chr3 (270-363)||(10690209-10690301)
chr3 (324-397)||(21479104-21479177)
chr3 (309-390)||(34910310-34910391)
chr3 (324-396)||(10954939-10955011)
chr3 (298-390)||(14832092-14832184)
chr3 (331-363)||(32804547-32804579)
chr3 (324-363)||(8789550-8789589)
chr3 (325-424)||(8842289-8842387)
chr3 (324-403)||(10318035-10318113)
chr3 (257-324)||(13845469-13845536)
chr3 (340-407)||(14979157-14979224)
chr3 (330-421)||(24205047-24205138)
chr3 (324-407)||(26492205-26492288)
chr3 (327-390)||(26508103-26508166)
chr3 (319-386)||(49651781-49651848)
chr3 (324-390)||(18426942-18427008)
chr3 (330-428)||(34307786-34307884)
chr3 (325-363)||(48202270-48202308)
chr3 (323-368)||(8930829-8930874)
chr3 (323-368)||(14028022-14028067)
chr3 (338-427)||(23915915-23916004)
chr3 (321-390)||(28812508-28812577)
chr3 (320-365)||(39756254-39756299)
chr3 (319-363)||(2731832-2731876)
chr3 (325-365)||(4201414-4201454)
chr3 (324-428)||(7171457-7171560)
chr3 (319-407)||(9800016-9800104)
chr3 (324-368)||(13414484-13414528)
chr3 (324-368)||(13845525-13845569)
chr3 (319-363)||(16192745-16192789)
chr3 (320-348)||(25211574-25211602)
[»] scaffold0053 (1 HSPs)
scaffold0053 (324-428)||(8753-8857)
[»] chr4 (63 HSPs)
chr4 (257-416)||(5414105-5414264)
chr4 (324-427)||(23292986-23293089)
chr4 (325-428)||(35157986-35158089)
chr4 (264-362)||(46083931-46084029)
chr4 (298-390)||(22234864-22234957)
chr4 (301-428)||(27706154-27706281)
chr4 (324-434)||(2361975-2362087)
chr4 (301-363)||(13134470-13134532)
chr4 (257-363)||(30982811-30982917)
chr4 (324-427)||(12895274-12895377)
chr4 (257-428)||(19482623-19482794)
chr4 (320-427)||(44081573-44081680)
chr4 (324-397)||(10499270-10499342)
chr4 (319-363)||(5775353-5775397)
chr4 (322-403)||(30298926-30299008)
chr4 (322-403)||(30327794-30327876)
chr4 (264-407)||(49431001-49431134)
chr4 (298-365)||(19312353-19312420)
chr4 (302-365)||(19500836-19500899)
chr4 (324-419)||(21945467-21945562)
chr4 (316-370)||(32915597-32915652)
chr4 (319-365)||(11931298-11931344)
chr4 (309-426)||(12708103-12708221)
chr4 (319-418)||(28084486-28084586)
chr4 (324-370)||(36409512-36409558)
chr4 (324-370)||(36423678-36423724)
chr4 (325-370)||(5555133-5555178)
chr4 (324-405)||(12797338-12797418)
chr4 (324-397)||(15029751-15029824)
chr4 (262-355)||(30838238-30838331)
chr4 (324-365)||(40179636-40179677)
chr4 (324-365)||(54580023-54580064)
chr4 (332-428)||(36635279-36635375)
chr4 (319-363)||(40742611-40742655)
chr4 (292-368)||(44132612-44132688)
chr4 (319-363)||(46160916-46160960)
chr4 (319-386)||(3947761-3947828)
chr4 (326-365)||(6485613-6485652)
chr4 (319-390)||(12895111-12895182)
chr4 (328-363)||(17344520-17344555)
chr4 (262-428)||(847906-848072)
chr4 (320-361)||(4099983-4100027)
chr4 (324-370)||(4157162-4157208)
chr4 (325-363)||(7214523-7214561)
chr4 (322-428)||(13783236-13783342)
chr4 (321-407)||(16303263-16303349)
chr4 (257-363)||(24613634-24613740)
chr4 (325-363)||(33950156-33950194)
chr4 (329-363)||(40613470-40613504)
chr4 (320-365)||(11596348-11596393)
chr4 (324-397)||(34306804-34306876)
chr4 (323-407)||(35723383-35723467)
chr4 (324-365)||(36509092-36509133)
chr4 (324-365)||(42640547-42640588)
chr4 (330-362)||(999354-999386)
chr4 (330-370)||(1213227-1213267)
chr4 (324-364)||(4157455-4157495)
chr4 (324-364)||(6879465-6879505)
chr4 (331-407)||(14126118-14126194)
chr4 (319-363)||(15659755-15659799)
chr4 (327-363)||(16189729-16189765)
chr4 (319-363)||(18576032-18576076)
chr4 (339-407)||(40481613-40481680)
[»] scaffold0027 (1 HSPs)
scaffold0027 (324-428)||(46637-46741)
[»] scaffold0623 (1 HSPs)
scaffold0623 (262-368)||(5934-6040)
[»] scaffold0116 (1 HSPs)
scaffold0116 (319-428)||(9853-9962)
[»] scaffold0652 (1 HSPs)
scaffold0652 (324-428)||(462-566)
[»] scaffold0223 (1 HSPs)
scaffold0223 (319-418)||(20137-20236)
[»] scaffold0171 (2 HSPs)
scaffold0171 (319-424)||(23380-23484)
scaffold0171 (308-365)||(23529-23586)
[»] scaffold0036 (1 HSPs)
scaffold0036 (257-363)||(9680-9786)
[»] scaffold0020 (1 HSPs)
scaffold0020 (320-418)||(135308-135406)
[»] scaffold0123 (1 HSPs)
scaffold0123 (298-363)||(44499-44564)
[»] scaffold0044 (1 HSPs)
scaffold0044 (262-363)||(53200-53301)
[»] scaffold0021 (1 HSPs)
scaffold0021 (327-428)||(130437-130538)
[»] scaffold0019 (1 HSPs)
scaffold0019 (265-397)||(71709-71843)
[»] scaffold0236 (1 HSPs)
scaffold0236 (321-363)||(25765-25807)
[»] scaffold0136 (1 HSPs)
scaffold0136 (264-365)||(3789-3890)
[»] scaffold0011 (1 HSPs)
scaffold0011 (325-398)||(17750-17823)
[»] scaffold0008 (1 HSPs)
scaffold0008 (262-427)||(263310-263475)
[»] scaffold0103 (1 HSPs)
scaffold0103 (339-403)||(51791-51855)
[»] scaffold0039 (1 HSPs)
scaffold0039 (298-390)||(84947-85039)
[»] scaffold0086 (1 HSPs)
scaffold0086 (262-365)||(2946-3049)
[»] scaffold0057 (1 HSPs)
scaffold0057 (299-390)||(24018-24108)
[»] scaffold0126 (1 HSPs)
scaffold0126 (320-421)||(19107-19207)
[»] scaffold0110 (1 HSPs)
scaffold0110 (320-396)||(28837-28913)
[»] scaffold0018 (1 HSPs)
scaffold0018 (319-407)||(178813-178902)
[»] scaffold1300 (1 HSPs)
scaffold1300 (293-365)||(593-665)
[»] scaffold0025 (1 HSPs)
scaffold0025 (321-365)||(23788-23832)
[»] scaffold0007 (1 HSPs)
scaffold0007 (330-421)||(225274-225365)
[»] scaffold0227 (1 HSPs)
scaffold0227 (332-390)||(7319-7377)
[»] scaffold0450 (1 HSPs)
scaffold0450 (251-396)||(8562-8707)
[»] scaffold0050 (1 HSPs)
scaffold0050 (324-365)||(70296-70337)
[»] scaffold0306 (1 HSPs)
scaffold0306 (324-424)||(13359-13459)
[»] scaffold0246 (1 HSPs)
scaffold0246 (339-407)||(19552-19619)
[»] scaffold0168 (1 HSPs)
scaffold0168 (319-427)||(20999-21107)
[»] scaffold0152 (1 HSPs)
scaffold0152 (324-424)||(21868-21968)
[»] scaffold0022 (1 HSPs)
scaffold0022 (320-368)||(99908-99956)


Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 19 - 312
Target Start/End: Original strand, 23859661 - 23859954
Alignment:
Q  19 ttttcaattcatgaaaagactggaattggaaaaatgattttgaattttaacacttcatataatgtgtgagtaaagtattcaagcttgagtactgcatacg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23859661 ttttcaattcatgaaaagactggaattggaaaaatgattttgaattttaacacttcacataatgtgtgagtaaagtattcaagcttgagtactgcatacg 23859760  T
Q  119 taattttcgaaatataatataggtatgctaatatcgttcatgacatcaaagatatgcttctcaaggattagaatgtcaagattcttgatactttgtgcaa 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23859761 taattttcgaaatataatataggtatgctaatatctttcatgacatcaaagatatgcttctcaaggattagaatgtcaagattcttgatactttgtgcaa 23859860  T
Q  219 agggaatcaatgtgcatatattttaactttacatctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtc 312  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||| |  ||||||  |||||||||||||| |||||    
T  23859861 agggaatcaatgtgcatatattttaactttacatctatgaagcacggacactcctcagataaggtatgtcactttgttagacacgtgtcgtgtc 23859954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 251 - 428
Target Start/End: Complemental strand, 24339774 - 24339597
Alignment:
Q  251 atctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaa 350  Q
    ||||| |||| |||| |||||||||||| | ||||||| | ||||  || |||||| ||||||| || ||||||||||||||||| | |||||||||| |    
T  24339774 atctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactga 24339675  T
Q  351 attatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    ||||||||||||||| || ||  ||||||||||||||||| | |||||||||||||| || ||||||| |||||||||    
T  24339674 attatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccggtgtccgtatccgtatcc 24339597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 347 - 434
Target Start/End: Original strand, 23859954 - 23860041
Alignment:
Q  347 ctaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatccttactt 434  Q
    |||||||||| |||||| |||||||||||  |||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||    
T  23859954 ctaaattatgcgattttctaaattttgtatatgtgtcggtgtgtcagtatccatgtcgtgttcgatgtccgtgtccgtatccttactt 23860041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 436 - 492
Target Start/End: Original strand, 23860501 - 23860557
Alignment:
Q  436 cgggacaaaaatccttttctttattgattgaaatatgaaaaatgacaacaatattat 492  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23860501 cgggacaaaaatccttttctttattgattgaaatatgaaaaatgacaacaatattat 23860557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 11061077 - 11061180
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgt 424  Q
    ||||||||||| | |||||| |||||||||||||||||||| || ||  |||||||||||| |||| ||||||| |||||| | ||||||||||||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgtccgtgtccgt 11061176  T
Q  425 atcc 428  Q
    ||||    
T  11061177 atcc 11061180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 319 - 428
Target Start/End: Complemental strand, 1433518 - 1433409
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| | || ||  || | |||||||||||| | ||||| ||||||||||| |||||||    
T  1433518 cgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgt 1433419  T
Q  419 gtccgtatcc 428  Q
    | ||||||||    
T  1433418 gcccgtatcc 1433409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 257 - 428
Target Start/End: Original strand, 5409775 - 5409940
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||||||||||||| | ||||||| | ||||  ||||||||| |||||||      ||||||||||||||| | ||||| |||| |||||||    
T  5409775 gaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccg------acacgacaccgacacttgtaattgcactgaattatg 5409868  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    ||||||||| || ||  ||||||| || |||||| |||||||||||||| | || |||| ||||| ||||||    
T  5409869 tgattttttcaaattattagctgtatcagcgtgtcagtgtccatgtcgtatccggtgtctgtgtctgtatcc 5409940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 25481961 - 25481857
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    ||||||| |||| | |||||||||| |||||||||||||||| || ||  ||||||||||||||||| | ||||||||| |||| ||||||||||||| |    
T  25481961 cgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtccgtgtctg 25481862  T
Q  424 tatcc 428  Q
    |||||    
T  25481861 tatcc 25481857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 424
Target Start/End: Original strand, 7328686 - 7328791
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| | || ||  |||| || ||| ||||||| ||||  ||||||||||| |||||||    
T  7328686 cgacacgacaccgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgt 7328785  T
Q  419 gtccgt 424  Q
     |||||    
T  7328786 atccgt 7328791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 428
Target Start/End: Complemental strand, 13770755 - 13770646
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    |||||||||| |||||| | |||||||||| |||||||| ||||||| || ||  ||||||||||||||| | ||||||| |||||||| |||||||||     
T  13770755 cgacacgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtccgatgtccga 13770656  T
Q  419 gtccgtatcc 428  Q
    |||| |||||    
T  13770655 gtccatatcc 13770646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 403
Target Start/End: Complemental strand, 15680868 - 15680789
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||||||||| |||||||||||||||||||||||||||||  | ||  ||||| ||||||||||| ||||||||||||    
T  15680868 cgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagtgtccatgtc 15680789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 402
Target Start/End: Complemental strand, 32308205 - 32308101
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    |||| |||| ||||||  || ||||||||||| |||||||| ||||||||| |||||||||||||| | || ||  |||| |||||||||||| ||||||    
T  32308205 gacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 32308106  T
Q  398 catgt 402  Q
    |||||    
T  32308105 catgt 32308101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 262 - 365
Target Start/End: Complemental strand, 2334370 - 2334268
Alignment:
Q  262 acggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatt 361  Q
    ||||||||||||||||| |  |||||  | ||||  |||| |||| ||||||| || ||||||||||||||||| | |||||||||||||||||||||||    
T  2334370 acggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgaca-cgacacgacaccgacacttgtaattacactaaattatgtgatt 2334272  T
Q  362 tttt 365  Q
    ||||    
T  2334271 tttt 2334268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 318 - 428
Target Start/End: Original strand, 22602704 - 22602814
Alignment:
Q  318 tcgacacgacaccgacacatataattacactaaattatgtgatttt-ttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtcc 416  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| | ||||  | || | |||||||||||| |||| |  ||||||||| | || ||    
T  22602704 tcgacacgacaccgacacatataattacactgaattatgtgattttctcaaataattta-cggtgtcggcgtgtcagtgcctgtgtcgtgttaggtgccc 22602802  T
Q  417 gtgtccgtatcc 428  Q
    ||||||||||||    
T  22602803 gtgtccgtatcc 22602814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 15902886 - 15902842
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  15902886 cgacacaacaccgacacatataattacactaaattatgtgatttt 15902842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 18213033 - 18213077
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaa 368  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  18213033 cgacaccgacacatataattacactaaattatgtgattttctaaa 18213077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 424
Target Start/End: Complemental strand, 21826332 - 21826232
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||||||| |||| ||| | |||||||||||||| || ||  |||  ||||||||||||||||||| |||||||||  | ||||| ||||||    
T  21826332 cgacaccgacacatattattagactgagttatgtgatttttttaaattattagtcgtgtcggcgtgttagtgtctatgtcgtgtctggtgtccatgtccg 21826233  T
Q  424 t 424  Q
    |    
T  21826232 t 21826232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 320 - 424
Target Start/End: Complemental strand, 27945104 - 27945000
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtg 419  Q
    |||||||||||||||| | |||||||||| |||||||| ||||| | || ||  |||  |||||||||||| ||||||| |||||||| || |||||||     
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgta 27945005  T
Q  420 tccgt 424  Q
    |||||    
T  27945004 tccgt 27945000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 403
Target Start/End: Original strand, 18215182 - 18215265
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||||||||||||| | ||| ||||||  ||||||||||||||| || ||  |||||| |||||||||||||||||| ||||    
T  18215182 gacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccgtgtc 18215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 326 - 428
Target Start/End: Complemental strand, 17851488 - 17851386
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgta 425  Q
    |||| |||||||||||||||||| |||||||||||||| |||| ||  |||| || |||  ||||  || |||||||||||| || |||||||||| |||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtccgtgtctgta 17851389  T
Q  426 tcc 428  Q
    |||    
T  17851388 tcc 17851386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 19206108 - 19206026
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||||||||||||||||| | | |||||||||||||| | || ||  |||| ||||||||||||| |||||| ||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgt 19206026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 16341560 - 16341516
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||    
T  16341560 cgacacgacaccggcacatataattacacttaattatgtgatttt 16341516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 426
Target Start/End: Original strand, 26329356 - 26329484
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    ||||||||| ||||| | || ||||||||| |||||||||||||||||||| |||| |||| |||| | || ||  || |  ||||||||||| ||||||    
T  26329356 gacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtc 26329455  T
Q  398 catgtcgtgttcgatgtccgtgtccgtat 426  Q
      |||||||| |  |||||||||| ||||    
T  26329456 tgtgtcgtgtccagtgtccgtgtctgtat 26329484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 325 - 368
Target Start/End: Complemental strand, 640171 - 640128
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaa 368  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  640171 gacaccgacacatataattacactgaattatgtgatttgttaaa 640128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 390
Target Start/End: Complemental strand, 2948739 - 2948676
Alignment:
Q  327 caccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||||||||||||||||||||||||||| |||||||| |||| ||   ||| ||||||||||||    
T  2948739 caccgacacatataattacactaaattacgtgattttctaaaattatcagcggtgtcggcgtgt 2948676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 363
Target Start/End: Complemental strand, 3721152 - 3721113
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  3721152 cgacaccgacacatataattatactaaattatgtgatttt 3721113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 320 - 418
Target Start/End: Complemental strand, 5236049 - 5235951
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttt-ttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    ||||||||||||| | |||||||||||||||||||| | ||||| ||||||| | |||| |||||| ||||| ||||||  |||||||| | ||||||||    
T  5236049 gacacgacaccgatatatataattacactaaattatataattttcttaaattat-tagcggtgtcgacgtgtcagtgtctgtgtcgtgtccaatgtccgt 5235951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 418
Target Start/End: Complemental strand, 7438770 - 7438671
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    ||||| ||||||||||| | |||||||| | |||||||||||||||| || ||  || |||||||||| ||| |||||  ||||||| | ||||||||||    
T  7438770 cgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgtttatgtcgtatccgatgtccgt 7438671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 9778620 - 9778463
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| |||||||||||| |||| | ||||||| | ||||  ||||||||| |||||||      ||||||||||||||| | |||||| ||| |||||||    
T  9778620 gaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccg------acacgacaccgacacttgtaattatactgaattatg 9778527  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    ||||||||| || ||   |||||||||        ||||||| |||||||| || |||||||||||||||||    
T  9778526 tgattttttcaaattatcagctgtgtc--------agtgtccgtgtcgtgtccggtgtccgtgtccgtatcc 9778463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 26033399 - 26033502
Alignment:
Q  262 acggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatt 361  Q
    ||||||||||||||||| | | ||||| | || |  |||||||||  |||| | || |||||||| |||||||| | |||||||||| ||||||||||||    
T  26033399 acggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaattatgtgatt 26033498  T
Q  362 tttt 365  Q
    ||||    
T  26033499 tttt 26033502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 26733363 - 26733280
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||||||||||| |||||| ||| |||||||||||||| | || ||  |||| |||||| ||||| ||||||| ||||||||    
T  26733363 cgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 26733280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 320 - 363
Target Start/End: Original strand, 27229307 - 27229350
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||| || |||||||||||||||||||||||||||    
T  27229307 gacacgacaccgatacttataattacactaaattatgtgatttt 27229350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 396
Target Start/End: Complemental strand, 41020553 - 41020483
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgattttt-taaattttgtagctgtgtcggcgtgttagtgt 396  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| | ||| ||||||| ||||| |||||    
T  41020553 acaccgacgcatataattacactaaattatgtgatttttgtaaattat-tagttgtgtcgacgtgtcagtgt 41020483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 320 - 407
Target Start/End: Original strand, 43027465 - 43027552
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||||||||||||| | || |||||||  ||||||||||||||| || ||  |||||| |||| ||||| ||||||| ||||||||    
T  43027465 gacacgacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgt 43027552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 365
Target Start/End: Original strand, 9408333 - 9408375
Alignment:
Q  323 acgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||||| | |||||||||||||||||||||||||||    
T  9408333 acgacaccgacacttgtaattacactaaattatgtgatttttt 9408375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 365
Target Start/End: Complemental strand, 18039063 - 18039017
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||    
T  18039063 cgacacgacaccgacacttgtaattacactgaattatgtgatttttt 18039017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 407
Target Start/End: Complemental strand, 49107882 - 49107797
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||||||||||||||||||| ||||| ||||||||| ||| | ||||| | |||| ||||||| |||| || |||| ||||||||    
T  49107882 acacgacaccgacacatataatcacactcaattatgtgttttctcaaattat-tagcggtgtcggtgtgtcagagtccgtgtcgtgt 49107797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 397
Target Start/End: Original strand, 6630888 - 6630985
Alignment:
Q  300 cacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    ||||||| ||||||| || | |||||||| ||||||||||||||||||| ||||| |||| ||| | || ||  |||  |||||||||||| ||||||    
T  6630888 cacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 18013070 - 18013115
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||    
T  18013070 gacacgacactgacacatataattacactgaattatgtaatttttt 18013115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 320 - 428
Target Start/End: Original strand, 21140978 - 21141086
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttt-ttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    |||||||| ||||||| |||||| ||||| |||||| ||||||| ||||||| | |||  |||||| |||||  | |||| |||||||| || |||||||    
T  21140978 gacacgactccgacacctataatcacactgaattatatgattttcttaaattat-tagtggtgtcgacgtgtcggcgtccgtgtcgtgtacggtgtccgt 21141076  T
Q  419 gtccgtatcc 428  Q
    ||||||||||    
T  21141077 gtccgtatcc 21141086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 363
Target Start/End: Original strand, 27093415 - 27093452
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||| |||||||||||||||||||||||||||||    
T  27093415 acaccgacgcatataattacactaaattatgtgatttt 27093452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 363
Target Start/End: Complemental strand, 27184886 - 27184849
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||| |||||||||||||||||||||||||||||    
T  27184886 acaccgacgcatataattacactaaattatgtgatttt 27184849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 323 - 396
Target Start/End: Complemental strand, 35862024 - 35861951
Alignment:
Q  323 acgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgt 396  Q
    ||||||| ||||| || ||||||| | |||||||||||||||| || ||  ||| |||||||||||||||||||    
T  35862024 acgacacagacacttacaattacattgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 35861951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 5548740 - 5548696
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||    
T  5548740 cgacacgacactgacacatataattacactgaattatttgatttt 5548696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 8160480 - 8160436
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||    
T  8160480 cgacacgataccaacacatataattacactaaattatgtaatttt 8160436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 10042999 - 10042915
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgt 405  Q
    ||||||||| ||||| ||||||||| ||||||||||||| ||| | || ||  |||  |||||||||||| ||||||| ||||||    
T  10042999 acacgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtcgt 10042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 11665414 - 11665506
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||||| |||| || || ||||| |||| |||||| |||||||| ||| |||||||||||||||| || ||  ||| |||||| ||||||    
T  11665414 gacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcagcgtgt 11665506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 17307957 - 17307913
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||| ||||||||||||||||| |||||||| |||||    
T  17307957 cgacacgacaccaacacatataattacactgaattatgttatttt 17307913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 396
Target Start/End: Complemental strand, 20549850 - 20549778
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgt 396  Q
    ||||||||||||||||||||||||| ||||| |||||||| | || ||  |||| ||||||| |||| |||||    
T  20549850 cgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgt 20549778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 22484083 - 22484011
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    |||||||||||||||||||| ||| |||||||  ||||| |||| ||  |||| |||||||||||| ||||||    
T  22484083 gacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtc 22484011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 365
Target Start/End: Complemental strand, 38143281 - 38143241
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  38143281 gacaccaacacatataattacattaaattatgtgatttttt 38143241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 39138503 - 39138459
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaa 368  Q
    ||||||||||| ||||||||||||| |||||||||||||| ||||    
T  39138503 cgacaccgacatatataattacactgaattatgtgattttctaaa 39138459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 363
Target Start/End: Complemental strand, 5233692 - 5233649
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||| ||||| |||||||||||||||||| |||||||||||||    
T  5233692 gacacaacaccaacacatataattacactagattatgtgatttt 5233649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 5956324 - 5956249
Alignment:
Q  332 acacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||||||||||||| |||||||| ||||||||| || ||  |||  || ||||||||| ||| ||||||||||||    
T  5956324 acacatataattacattaaattatttgatttttttaaattattaggagtatcggcgtgtcagtatccatgtcgtgt 5956249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 363
Target Start/End: Complemental strand, 9482993 - 9482954
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  9482993 cgacaccgacacatataattacactgaattgtgtgatttt 9482954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 24105737 - 24105654
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||| ||||||| | |||||||||| ||| |||  ||||||| || ||  ||||||||||||||||| ||||||| ||||||||    
T  24105737 cgactccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 24105654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 434
Target Start/End: Original strand, 29763193 - 29763284
Alignment:
Q  343 tacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatccttactt 434  Q
    |||||| |||||||||||||||| || ||   || ||||| || |||| |||||| |||||||||||| |||| |||| ||||||| |||||    
T  29763193 tacacttaattatgtgattttttcaaattataagttgtgttggtgtgtcagtgtctatgtcgtgttcggtgtctgtgttcgtatccgtactt 29763284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 365
Target Start/End: Complemental strand, 2845050 - 2845004
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||| ||||| ||||||||||||||||||||| ||| |||||||||    
T  2845050 cgacatgacactgacacatataattacactaaactatatgatttttt 2845004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 362
Target Start/End: Original strand, 3142062 - 3142116
Alignment:
Q  308 gtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattt 362  Q
    |||||||||| |||||| |||||||||||||| |||||| | |||||| ||||||    
T  3142062 gtgtccggcaccgacacaacaccgacacatatgattacattgaattatatgattt 3142116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 5835305 - 5835267
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  5835305 gacaccgacacatataattacactgaattatgttatttt 5835267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 365
Target Start/End: Complemental strand, 21560563 - 21560521
Alignment:
Q  323 acgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||||| | |||||||||| ||||||||||||||||    
T  21560563 acgacaccgacacttgtaattacactgaattatgtgatttttt 21560521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 365
Target Start/End: Original strand, 32094015 - 32094061
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||||||||  | |||||||||| ||||||||||||||||    
T  32094015 cgacacgacaccgacatttgtaattacactgaattatgtgatttttt 32094061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 365
Target Start/End: Original strand, 11272570 - 11272629
Alignment:
Q  308 gtgtccggcatcgacacgacaccgacacatataattacactaaat--tatgtgatttttt 365  Q
    ||||||| || ||||||||||||||||| | |||||||||| |||  |||||||||||||    
T  11272570 gtgtccgacaccgacacgacaccgacacttgtaattacactgaattatatgtgatttttt 11272629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 14729818 - 14729770
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtg 305  Q
    |||||||||||||||||||||| ||||||||| | ||||  ||||||||    
T  14729818 gaagtacggacactcctcggattaagcgtgtcccggtgtcggacacgtg 14729770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 363
Target Start/End: Complemental strand, 19992061 - 19992021
Alignment:
Q  323 acgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||| |||||||||||| || |||||||||||    
T  19992061 acgacaccgacacttataattacactgaaatatgtgatttt 19992021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 400
Target Start/End: Complemental strand, 21930691 - 21930612
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccat 400  Q
    ||||||||| |||||| | |||||| | | |||||| | |||||||||||| | |||||| |||||||||| |||||||||    
T  21930691 gacacgacatcgacacttgtaattaaaatgaattatctaattttttaaattat-tagctgagtcggcgtgtcagtgtccat 21930612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 363
Target Start/End: Complemental strand, 22868094 - 22868062
Alignment:
Q  331 gacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||||||||| ||||||||||||||    
T  22868094 gacacatataattacactgaattatgtgatttt 22868062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 29787383 - 29787443
Alignment:
Q  338 ataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtcc 398  Q
    ||||||||||| |||||||||||||| | || ||  |||| |||||||||||||| |||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtcc 29787443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 355
Target Start/End: Original strand, 33384577 - 33384613
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattat 355  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  33384577 cgacaccacaccaacacatataattacactaaattat 33384613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 365
Target Start/End: Original strand, 42720891 - 42720931
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  42720891 gacactgacacatataattacatttaattatgtgatttttt 42720931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 1e-39; HSPs: 77)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 16766823 - 16766652
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||| || |||||| | ||||||| | ||||  ||||||||| ||||||| || ||||||||||||||||| | |||||||||| |||||||    
T  16766823 gaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatg 16766724  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    ||||||||| || ||  ||||||||||||||||| |||||||||||||||| || |||||||||||||||||    
T  16766723 tgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatcc 16766652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 18367962 - 18367792
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| |||||||||||| |||||| ||||||| |||||| ||||| |||| ||||| | || ||||||||||||||||||||||||||||||  ||| ||    
T  18367962 gaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgcattttg 18367863  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    ||||||| ||||     |||||||||||||||| | ||||||||||||||| || |||||||||||||||||    
T  18367862 tgattttctaaaaaaattagctgtgtcggcgtg-tcgtgtccatgtcgtgtccggtgtccgtgtccgtatcc 18367792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 250 - 428
Target Start/End: Original strand, 9107296 - 9107474
Alignment:
Q  250 catctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacacta 349  Q
    |||||| |||| |||| |||||||||||| | | ||||| | ||||  |||||  || ||||||| || ||||||||||||||||| | ||||||||||     
T  9107296 catctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactg 9107395  T
Q  350 aattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    |||| ||||||||||| || ||  ||||||||||||||||||||||||| |||||||| || |||||||||| ||||||    
T  9107396 aattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgtgtcagtatcc 9107474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 7938174 - 7938071
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgt 424  Q
    ||||||||||| ||||||||||||||||||| ||||||||| || ||  ||||||||||||||||| |||||||||||||||| || |||||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgt 7938075  T
Q  425 atcc 428  Q
    ||||    
T  7938074 atcc 7938071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 321 - 418
Target Start/End: Complemental strand, 3398680 - 3398584
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    |||||||||||| || |||||||||||| |||||| |||||||| ||||| | ||||||||||||||||| ||||||| |||||||||||||||||||    
T  3398680 acacgacaccgatacttataattacactgaattatatgatttttcaaattat-tagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgt 3398584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 257 - 424
Target Start/End: Original strand, 8365452 - 8365619
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||| ||||||||||| | ||||||| | ||||  ||||||||| |||||||  | ||||||||||||||||| | |||||||||  |||||||    
T  8365452 gaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatg 8365551  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgt 424  Q
    |||| |||| || ||  ||| ||||||||||||| ||||||| ||||||||  | ||||||| |||||    
T  8365552 tgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccgt 8365619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 257 - 390
Target Start/End: Original strand, 16488523 - 16488656
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||| ||| |||| |||||| ||||||| |||||  |||||||||| ||||||| || ||||||||||||||||||||||||||||||  ||| ||    
T  16488523 gaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttg 16488622  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||| ||||     |||||||||||||||||    
T  16488623 tgattttctaaaaaaattagctgtgtcggcgtgt 16488656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 5732510 - 5732614
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||||||||||||||||||| ||||||||||| | || ||  || | |||||||||||| |||||||||||||||| |  |||||||||| |    
T  5732510 cgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgtgtctg 5732609  T
Q  424 tatcc 428  Q
    |||||    
T  5732610 tatcc 5732614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 320 - 427
Target Start/End: Complemental strand, 9027241 - 9027134
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtg 419  Q
    ||||||||||||||||||||||||||||  |||||||||||| | | || ||  |||| |||||||||||| ||||||| |||||||| ||  |||||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgtg 9027142  T
Q  420 tccgtatc 427  Q
    ||||||||    
T  9027141 tccgtatc 9027134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 7977830 - 7977934
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||| | |||||||||| |||||||| ||||||| || ||  ||||||||||||||||| ||| |||||||||||| |  |||||||||||     
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgtgtcca 7977929  T
Q  424 tatcc 428  Q
    |||||    
T  7977930 tatcc 7977934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 8776973 - 8777077
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    ||||||| |||| | |||||||||| |||| ||||||||||| || ||  ||| ||||||||||||| ||||||| |||||||| || ||||||||||||    
T  8776973 cgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgtgtccg 8777072  T
Q  424 tatcc 428  Q
    |||||    
T  8777073 tatcc 8777077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 257 - 428
Target Start/End: Original strand, 10339058 - 10339230
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataatt-acactaaattat 355  Q
    |||| ||||||||||||| ||| | ||||||| | ||||  |||| |||| ||||||| || ||||||| ||| ||||||||||||| ||||| ||||||    
T  10339058 gaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaattat 10339157  T
Q  356 gtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    |||||||| | || ||  | || |||||||||||| ||||| |||||||||| |  ||||| |||| ||||||    
T  10339158 gtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttcatgtcgtgtcctgtgtccatgtctgtatcc 10339230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 265 - 424
Target Start/End: Complemental strand, 12696436 - 12696284
Alignment:
Q  265 gacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttt 364  Q
    ||||||||| |||||| | ||||| | |||| |||||||||| |||||||      ||||||||| ||||| | |||||||||| |||||||| ||||||    
T  12696436 gacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccg------acacgacactgacacttgtaattacactgaattatgtaattttt 12696343  T
Q  365 taaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgt 424  Q
    | || ||  ||||||||||||||||| ||||||| |||||||| || ||||||| |||||    
T  12696342 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg-tgtccgtatccgt 12696284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 257 - 428
Target Start/End: Original strand, 17327594 - 17327759
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||||||||||||| | ||||||| | |||| |||||||||| |||||||      ||||||||| |||||||||| |||||||||||||||    
T  17327594 gaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccg------acacgacactgacacatatagttacactaaattatg 17327687  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    ||||||| | ||  |  ||| ||||||||||| | | |||| ||||||||| || | ||||||  |||||||    
T  17327688 tgattttctcaaaatcttagttgtgtcggcgtatcactgtctatgtcgtgtccggtatccgtggtcgtatcc 17327759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 320 - 407
Target Start/End: Original strand, 10770670 - 10770757
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||||||||||||| | |||||||||| |||||||||||||||| || ||  ||| ||||| ||||||| ||||||||||||||||    
T  10770670 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgt 10770757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 426514 - 426618
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||| | |||||||| | |||||||||||||||| || ||  || |||||||||||||| ||||||| |||||||| || | |||||||| |    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtctg 426613  T
Q  424 tatcc 428  Q
    |||||    
T  426614 tatcc 426618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 324 - 403
Target Start/End: Original strand, 17841589 - 17841668
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||||| ||| | ||||||||||||||||||||||||||| || ||  ||||||||||||||||| ||||||| ||||    
T  17841589 cgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 319 - 390
Target Start/End: Complemental strand, 26562753 - 26562682
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| | || ||| |||| ||||||||||||    
T  26562753 cgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgt 26562682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 324 - 419
Target Start/End: Complemental strand, 34595193 - 34595098
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtg 419  Q
    |||||||||||| | |||||||||| |||||||||||||||| || ||  ||| ||||||||||||| | ||||| |||||||| || ||||||||    
T  34595193 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtg 34595098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 407
Target Start/End: Complemental strand, 9658936 - 9658855
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgatttt-ttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||| | |||| |||||||||||| ||||||| ||||||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattat-tagcggtgtcggcgtgtcagtgtccgtgtcgtgt 9658855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 423
Target Start/End: Complemental strand, 13851794 - 13851696
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||| ||||||||||||||||||| ||||| || ||||| | || ||  |||| |||||| ||||| ||||||| |||||||||| |||||||||||||    
T  13851794 gacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgttcaatgtccgtgtccg 13851696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 396
Target Start/End: Complemental strand, 6214620 - 6214547
Alignment:
Q  323 acgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgt 396  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||| ||  |||| || |||||||||||||||    
T  6214620 acgacaccgacacatctaattacacttaattatgtgtttttttaaaattactagcggtatcggcgtgttagtgt 6214547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 319 - 391
Target Start/End: Original strand, 8931597 - 8931669
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgtt 391  Q
    |||||||||| ||||||||||||||| ||| |||||||| ||||| | || ||| ||||||||||||||||||    
T  8931597 cgacacgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgtcggcgtgtt 8931669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 363
Target Start/End: Complemental strand, 7086858 - 7086815
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  7086858 gacactacaccgacacatataattacactaaattatgtgatttt 7086815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 363
Target Start/End: Original strand, 9025490 - 9025533
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgatttt 9025533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 415
Target Start/End: Complemental strand, 19044527 - 19044432
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtc 415  Q
    |||| |||||||||||||||||| ||||| ||||||||||| || | || ||  |||  |||||||||||| |||||||||||||| |||| ||||    
T  19044527 gacatgacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtccatgtcgtattcggtgtc 19044432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 434
Target Start/End: Original strand, 24115846 - 24115957
Alignment:
Q  323 acgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtcc 422  Q
    |||||||| ||| ||||||||| | | |||||||||||||||| || ||  ||| |||||| |||||| |||| | |||||||||||| |||| |||||     
T  24115846 acgacaccaacatatataattatattgaattatgtgattttttgaaattattagttgtgtcagcgtgtcagtgcctatgtcgtgttcggtgtctgtgtct 24115945  T
Q  423 gtatccttactt 434  Q
    |||||| |||||    
T  24115946 gtatccgtactt 24115957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 403
Target Start/End: Complemental strand, 28152157 - 28152079
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||||||||| | |||||||||| ||||||||||||||| ||||| | ||||| ||||||||||| ||||||| ||||    
T  28152157 cgacaccgacacttgtaattacactgaattatgtgatttttcaaattat-tagctttgtcggcgtgtcagtgtccgtgtc 28152079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 330 - 428
Target Start/End: Complemental strand, 1681811 - 1681713
Alignment:
Q  330 cgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    |||||| | |||||||||| ||||| |||||||||| || ||  ||| |||||||||||||||||||   ||||||||||| |||| ||||| ||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgttcggtgtctgtgtctgtatcc 1681713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 398
Target Start/End: Original strand, 7265593 - 7265667
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtcc 398  Q
    ||||||||||||||||||||||||| |||||||||||||| | || ||  |||| |||| ||||||| |||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtcc 7265667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 363
Target Start/End: Original strand, 9195751 - 9195793
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  9195751 acacgacaccgacacatataattacactaaattatgtcatttt 9195793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 390
Target Start/End: Original strand, 33001289 - 33001355
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||||||||||||||||||| | |||||||||||||||| || ||  |||| ||||||||||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgt 33001355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 7027301 - 7027260
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgatttttt 7027260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 403
Target Start/End: Complemental strand, 10842585 - 10842512
Alignment:
Q  330 cgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||||||| ||||||||||||||||||||||||| || ||  |||| ||||||||||||  ||||| |||||    
T  10842585 cgacacatatgattacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtccgtgtcaatgtc 10842512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 424
Target Start/End: Original strand, 853859 - 853959
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||| | ||||| |||| |||||||||||||||| || ||  ||| ||||||||||||| ||  ||| |||||||| || ||||||| ||||    
T  853859 cgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatccg 853958  T
Q  424 t 424  Q
    |    
T  853959 t 853959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 396
Target Start/End: Original strand, 7801156 - 7801228
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgt 396  Q
    |||||||||||| | ||||||| || |||||||||||||||| || ||  ||| |||||||||||||||||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 7801228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 363
Target Start/End: Complemental strand, 9629502 - 9629403
Alignment:
Q  264 ggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacac-gacaccgacacatataattacactaaattatgtgattt 362  Q
    ||||||||||||||| |  |||||| | ||||  ||||| ||| ||||||| || |||||| |||||||||||||||||||||| | |||||||||||||    
T  9629502 ggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgaca-cgacaccgacaccgacacatataattacattgaattatgtgattt 9629404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 365
Target Start/End: Complemental strand, 31385045 - 31384938
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| |||||||||||| |||| | ||||||| | ||||  ||||||||| ||||||  || | ||||||||| ||||| | |||||||||| |||||||    
T  31385045 gaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaaca-ctacacgacactgacacttgtaattacactgaattatg 31384947  T
Q  357 tgatttttt 365  Q
    |||||||||    
T  31384946 tgatttttt 31384938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 420
Target Start/End: Complemental strand, 3209441 - 3209345
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt--aaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgt 420  Q
    |||||||||||| | |||| ||||||||||||||||||||||  ||||| | |||||||||||||||||  |||| | |||||||| || |||||||||    
T  3209441 cgacaccgacacttgtaataacactaaattatgtgatttttttcaaattat-tagctgtgtcggcgtgtctgtgt-cgtgtcgtgtccggtgtccgtgt 3209345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 322 - 365
Target Start/End: Complemental strand, 7151473 - 7151430
Alignment:
Q  322 cacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||    
T  7151473 cacgacaccaacacatataattacacttaattatgtgatttttt 7151430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 7378038 - 7377972
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||||||||||||||||||| | |||||||||||||| | || ||| |||| ||||||| ||||    
T  7378038 cgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcggggtgt 7377972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 428
Target Start/End: Complemental strand, 10294192 - 10294062
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    ||||| ||| ||||||| || | |||||||||||||||||||||||||| | || |||| |||| | | || ||  |||| || ||||| ||| ||| ||    
T  10294192 gacacatgtcgtgtccgacaccaacacgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatc 10294093  T
Q  398 catgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    | |||||||| || ||| |||||||||||||    
T  10294092 cgtgtcgtgtccggtgttcgtgtccgtatcc 10294062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 421
Target Start/End: Original strand, 10888969 - 10889071
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    |||||||||||  ||||||||||| |||||||||||||||||||| | || ||  |||| |||||   ||||  |||||| |||| |||| |||||||||    
T  10888969 cgacacgacactaacacatataatcacactaaattatgtgattttatcaaattattagcggtgtctatgtgtcggtgtccgtgtcatgtttgatgtccgt 10889068  T
Q  419 gtc 421  Q
    |||    
T  10889069 gtc 10889071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 19040411 - 19040345
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||||| |||||||||||||||||| |||||||||||||| | || ||  |||| ||||||||||||    
T  19040411 cgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 19040345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 428
Target Start/End: Original strand, 21395290 - 21395411
Alignment:
Q  306 tggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgt 405  Q
    ||||||||| ||  |||||||||||||||| | ||||||||||||||||||| ||||| | || ||  |||| |||| |||||||  ||||||||||| |    
T  21395290 tggtgtccgacactgacacgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtcggtgtccatgtcat 21395388  T
Q  406 gttcgatgtccgtgtccgtatcc 428  Q
     | || |||| ||||| ||||||    
T  21395389 atccggtgtctgtgtctgtatcc 21395411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 257 - 362
Target Start/End: Complemental strand, 7248484 - 7248379
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| |||||||||||||||||    |||||| | ||||  ||||| ||| ||||||  || ||||||||| || |||||||||||||| || |||||||    
T  7248484 gaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatg 7248385  T
Q  357 tgattt 362  Q
    ||||||    
T  7248384 tgattt 7248379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 407
Target Start/End: Complemental strand, 16833365 - 16833284
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||||||| | |||||||||| || ||||||||||||| || ||  ||| ||||||||||||| ||||||  ||||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgt 16833284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 363
Target Start/End: Original strand, 26178683 - 26178720
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||||| |||||||||||||||||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgatttt 26178720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 7973716 - 7973672
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||    
T  7973716 acacgacaccgacacttataattacacttaattatgtaatttttt 7973672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 363
Target Start/End: Complemental strand, 9617494 - 9617454
Alignment:
Q  323 acgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  9617494 acgacaccgacacatataattacattgaattatgtgatttt 9617454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 34073342 - 34073386
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||| |||||||||||||| ||||||| ||||||    
T  34073342 cgacacgacaccgacccatataattacactgaattatgagatttt 34073386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 390
Target Start/End: Original strand, 5970087 - 5970174
Alignment:
Q  303 gtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||| ||||||| || |||||||||||| |||  | |||||||||| |||||||||||||||| || ||  || |||||||| |||||    
T  5970087 gtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 5970174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 403
Target Start/End: Original strand, 7996378 - 7996457
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||||||| |||||||||||||| |||||| ||||||| | || ||  |||| |||||||| ||| ||||||| ||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtccttgtc 7996457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 403
Target Start/End: Complemental strand, 8022423 - 8022344
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||||||| |||||||||||||| |||||| ||||||| | || ||  |||| |||||||| ||| ||||||| ||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtccttgtc 8022344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 365
Target Start/End: Complemental strand, 9522976 - 9522909
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||| |  |||| || |||||| |||||||||| | |||||||||| ||||||||||||||||    
T  9522976 gacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttt 9522909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 16111752 - 16111795
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattt 362  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||    
T  16111752 cgacacgacactgacacctataattacactaaattatgtaattt 16111795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 32298608 - 32298643
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgat 360  Q
    |||||| |||||||||||||||||||||||||||||    
T  32298608 gacaccaacacatataattacactaaattatgtgat 32298643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 424
Target Start/End: Complemental strand, 6389796 - 6389702
Alignment:
Q  330 cgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgt 424  Q
    |||||| ||| ||||||||||||||| | ||||| | || ||  || | |||||||||||| ||||||| |||||||| || |||| ||||||||    
T  6389796 cgacacctatgattacactaaattatatcattttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgt 6389702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 7930368 - 7930290
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtcc 398  Q
    |||||||||||||||| |  |||| ||||||||||||||||||||| || ||  ||  ||||||||| ||| |||||||    
T  7930368 gacacgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtcc 7930290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 365
Target Start/End: Complemental strand, 8714060 - 8713998
Alignment:
Q  303 gtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||| ||||||| || |||||||||||| |||  | |||||||||| ||||||||||||||||    
T  8714060 gtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttttt 8713998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 9911524 - 9911566
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattt 362  Q
    |||||||||||||||| | |||||||||| |||||||||||||    
T  9911524 gacacgacaccgacacttgtaattacactgaattatgtgattt 9911566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 13360373 - 13360411
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  13360373 gacaccgaaacatataattacactgaattatgtgatttt 13360411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 403864 - 403905
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||||| | || ||||||||||||||||||||||||    
T  403864 cgacaccgacacttgtagttacactaaattatgtgatttttt 403905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 1700411 - 1700370
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||||| |||||||||||| || |||||||||||||    
T  1700411 cgacaccgacacttataattacactgaaatatgtgatttttt 1700370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 435
Target Start/End: Complemental strand, 11352368 - 11352307
Alignment:
Q  374 tagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatccttacttt 435  Q
    |||| |||||| | ||||||| ||  ||||||||||||||||||||||| |||| |||||||    
T  11352368 tagcggtgtcgacatgttagtatctgtgtcgtgttcgatgtccgtgtccatatctttacttt 11352307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Original strand, 11591876 - 11591909
Alignment:
Q  330 cgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||| ||||||||||||||    
T  11591876 cgacacatataattacactgaattatgtgatttt 11591909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 12627577 - 12627618
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||| |||||||||| |||||||| ||||||||||||||||    
T  12627577 cgacatcgacacatattattacactgaattatgtgatttttt 12627618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 18252747 - 18252792
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||| |||||||| | ||||||||||||||||||| |||||||    
T  18252747 gacacgataccgacacctgtaattacactaaattatgtcatttttt 18252792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 390
Target Start/End: Original strand, 32978899 - 32978966
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt--aaattttgtagctgtgtcggcgtgt 390  Q
    |||||||||||| | |||||||||| ||||||||| ||||||  ||||| | |||||||||||||||||    
T  32978899 cgacaccgacacttgtaattacacttaattatgtgttttttttcaaattat-tagctgtgtcggcgtgt 32978966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 33925030 - 33925079
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaa 368  Q
    |||||||| |||||||||||| |||||||| |||||| | ||||||||||    
T  33925030 cgacacgataccgacacatattattacactgaattatataattttttaaa 33925079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 420
Target Start/End: Original strand, 6898281 - 6898377
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgt 420  Q
    |||||||||||| | |||||||||| |||||||| |||| || || ||  |||  ||||| |||||| ||||||||| |||||| || ||| |||||    
T  6898281 cgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcagcgtgtcagtgtccatatcgtgtccgttgttcgtgt 6898377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 363
Target Start/End: Original strand, 8805570 - 8805611
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||| |||||||||||||  |||||||||||||||||||||||    
T  8805570 gacactacaccgacacata--attacactaaattatgtgatttt 8805611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 363
Target Start/End: Complemental strand, 17302399 - 17302367
Alignment:
Q  331 gacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||| |||||||||||||||    
T  17302399 gacacatataattacacaaaattatgtgatttt 17302367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 20576625 - 20576665
Alignment:
Q  316 catcgacacgacaccgacacatataattacactaaattatg 356  Q
    ||||||||||||||| |||| |||||||||||| |||||||    
T  20576625 catcgacacgacaccaacacttataattacactgaattatg 20576665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 360
Target Start/End: Original strand, 21924935 - 21924971
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgat 360  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  21924935 cgacaccgacacatataattacactgaattatttgat 21924971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 368
Target Start/End: Original strand, 32248937 - 32248969
Alignment:
Q  336 atataattacactaaattatgtgattttttaaa 368  Q
    |||||||||| ||||||||||||||||||||||    
T  32248937 atataattaccctaaattatgtgattttttaaa 32248969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 32320664 - 32320708
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||||| ||||||||| ||| | ||||||||||||||    
T  32320664 cgacacgacaccgatacatataatgacattgaattatgtgatttt 32320708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 434
Target Start/End: Complemental strand, 22652115 - 22651925
Alignment:
Q  244 actttacatctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataatt 343  Q
    |||||||| ||| |||| ||||||||||||||||| |  |||||| | ||||  ||||| ||| ||||||| || ||||||||||||||||| | |||||    
T  22652115 actttacagctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaatt 22652016  T
Q  344 acactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatccttactt 434  Q
    | | | |||||||||||||||| || ||  ||||||||||||||||| ||||||| |||||||| || |||| |||||||||||| |||||    
T  22652015 atattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcagtgtccgtatccgtactt 22651925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 257 - 428
Target Start/End: Original strand, 29510237 - 29510408
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||||||||||||| | | ||||| | ||||  |||||| || ||||||| || |||||| |||||||||| | |||||| ||| |||| ||    
T  29510237 gaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaattttg 29510336  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    ||||||||| || ||  ||||||||||||||||| ||||||| |||||||| || ||||| |||| ||||||    
T  29510337 tgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccatgtcagtatcc 29510408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 257 - 398
Target Start/End: Original strand, 15816062 - 15816203
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||||| ||||||| | ||||||| | ||||  ||  ||||| ||||||| || | ||||||||||||||| ||||||||||||||||||||    
T  15816062 gaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaattatg 15816161  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtcc 398  Q
    ||||||||| || ||  ||| ||||||||||||| |||||||    
T  15816162 tgattttttcaaattattagttgtgtcggcgtgtcagtgtcc 15816203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 252 - 363
Target Start/End: Original strand, 26902103 - 26902214
Alignment:
Q  252 tctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaa 351  Q
    |||| |||| ||||||||||||| ||||| ||||||| |||||  |||||||||| ||||||| ||   | |||||||||||||||||||||||||| ||    
T  26902103 tctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaa 26902202  T
Q  352 ttatgtgatttt 363  Q
    ||||||||||||    
T  26902203 ttatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 428
Target Start/End: Original strand, 2572030 - 2572160
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    ||||||||| ||||||| ||  |||||||||||||||| | ||||||||||||||||||||||||||| || ||  ||| ||||||| |||||  || ||    
T  2572030 gacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatc 2572129  T
Q  398 catgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    | |||||||| |  |||||||||||||||||    
T  2572130 cgtgtcgtgtccagtgtccgtgtccgtatcc 2572160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 363
Target Start/End: Original strand, 34450965 - 34451076
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggca-----tcgacacgacaccgacacatataattacactaaa 351  Q
    |||| |||||||||||| |||||| ||||||| |||||| |||||||||| ||||||| ||      ||||||||||||||||||||||||||||||  |    
T  34450965 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacgacacgacaccgacacatataattacactgca 34451064  T
Q  352 ttatgtgatttt 363  Q
    || |||||||||    
T  34451065 ttttgtgatttt 34451076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 265 - 368
Target Start/End: Complemental strand, 18964297 - 18964192
Alignment:
Q  265 gacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacac--cgacacatataattacactaaattatgtgattt 362  Q
    |||||||||||||||| ||||||| |||||||||||| |||| |||| |  |  |||||||||||  ||||||||||||||||| | |||||||||||||    
T  18964297 gacactcctcggataaggcgtgtctccgtgttagacaggtgtcgtgttcaacgccgacacgacacaccgacacatataattacattgaattatgtgattt 18964198  T
Q  363 tttaaa 368  Q
    | ||||    
T  18964197 tctaaa 18964192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 319 - 424
Target Start/End: Original strand, 13436959 - 13437064
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    ||||||||||||||||| | | |||||  | |||||||||||||||| || ||  ||||||||||||||||| |||||||||||| ||| || ||||| |    
T  13436959 cgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccat 13437058  T
Q  419 gtccgt 424  Q
    ||||||    
T  13437059 gtccgt 13437064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 421
Target Start/End: Original strand, 22197743 - 22197839
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtc 421  Q
    ||||| ||||| | ||||||||||||||||||||| ||||| || ||  ||||||||| ||||||||||||||  |||||||| || ||||||||||    
T  22197743 gacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgtccgtgtc 22197839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 27101573 - 27101470
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||| ||||| ||||||| ||||||||||||||||||||| || ||  |||| |||||||||||| | ||||||| |||| ||||||||| ||||| |    
T  27101573 cgacactgacacctataatt-cactaaattatgtgattttttcaaattattagcggtgtcggcgtgtcaatgtccatatcgtattcgatgtcggtgtctg 27101475  T
Q  424 tatcc 428  Q
    |||||    
T  27101474 tatcc 27101470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 20873128 - 20873045
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||||||||| | ||||||||||||||||||||||||||| || ||  || || ||||||||||| ||||||| ||||||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgt 20873045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 252 - 418
Target Start/End: Original strand, 11927014 - 11927180
Alignment:
Q  252 tctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaa 351  Q
    |||| |||| |||||||||| |||||| | ||||||| |  |||| || || ||| ||||  | || | |||||||||||||||||||||||||||| ||    
T  11927014 tctatgaagcacggacactcatcggattaggcgtgtctcgatgttggatacatgtcgtgtatgacaccaacacgacaccgacacatataattacactgaa 11927113  T
Q  352 ttatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    |||||||||||| | || ||  || | |||||||||| ||||  ||| ||||||||| | |||||||    
T  11927114 ttatgtgattttatcaaattattaacagtgtcggcgtattagcatccgtgtcgtgtttggtgtccgt 11927180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 418
Target Start/End: Complemental strand, 11944732 - 11944630
Alignment:
Q  316 catcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtc 415  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||| | || ||  || | |||||||||||||||  ||| ||||||||| | ||||    
T  11944732 catcaacacgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtc 11944633  T
Q  416 cgt 418  Q
    |||    
T  11944632 cgt 11944630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 427
Target Start/End: Original strand, 24362175 - 24362305
Alignment:
Q  298 gacacgtgtggtgtccgg-catcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgt 396  Q
    ||||||||| |||||||| || ||||||||||  |||||||||||||||||| |||||||||||| | | || ||  |||| ||||||||||||  ||||    
T  24362175 gacacgtgtcgtgtccggacaccgacacgacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgt 24362274  T
Q  397 ccatgtcgtgttcgatgtccgtgtccgtatc 427  Q
    |  |||||| | || ||||||| ||||||||    
T  24362275 ctgtgtcgtatccggtgtccgtatccgtatc 24362305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 425
Target Start/End: Complemental strand, 31557054 - 31556955
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgt 424  Q
    |||||||| || | |||||||||| ||||||||||||||| ||||| | || |||||||||||||| |||| ||||||| ||| || ||||||| |||||    
T  31557054 gacaccgaaacttgtaattacactgaattatgtgatttttcaaattat-taactgtgtcggcgtgtcagtgaccatgtcatgtccggtgtccgtatccgt 31556956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 408
Target Start/End: Complemental strand, 36934745 - 36934645
Alignment:
Q  308 gtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||||  ||||| ||||| || ||||||||||||||| | ||||||||||||||||  | ||  |||| |||||| ||||||||||||| ||||||||    
T  36934745 gtgtccgatatcgaaacgacgccaacacatataattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgt 36934646  T
Q  408 t 408  Q
    |    
T  36934645 t 36934645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 4673409 - 4673528
Alignment:
Q  308 gtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||||| |||| ||| ||||| || || | |||||||||| |||| | ||||||||| || ||  || |||||||||||||| ||||||  ||||||||    
T  4673409 gtgtccgacatcaacaagacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgt 4673508  T
Q  408 tcgatgtccgtgtccgtatc 427  Q
     |||||||||| ||||||||    
T  4673509 ccgatgtccgtatccgtatc 4673528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 418
Target Start/End: Original strand, 25192350 - 25192441
Alignment:
Q  327 caccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    ||||||||| |||||||| ||| |||||||| | ||||| || ||  ||||||||||||||||| ||||||| | |||||| ||||||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgt 25192441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 4298887 - 4298969
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||||||||| | |||||||| |||||||||||||||||| || ||  || |||||||||||||||||| ||  ||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgt 4298969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 390
Target Start/End: Original strand, 13844596 - 13844662
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||||||||||||||||||||| |||||||||||||| | || ||  |||| ||||||||||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgt 13844662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 29447576 - 29447467
Alignment:
Q  251 atctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaa 350  Q
    ||||| |||| ||||||||||||| ||| |  | |||| | ||||  ||||| ||| ||||| | || |||||||||||| ||||||||||||||||| |    
T  29447576 atctatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacacgacaccaacacatataattacactta 29447477  T
Q  351 attatgtgat 360  Q
    ||||||||||    
T  29447476 attatgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 390
Target Start/End: Original strand, 39954277 - 39954345
Alignment:
Q  322 cacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||| ||||| ||||||||||||||||||||||||||||||| | || ||  |||| ||||||||||||    
T  39954277 cacggcaccgtcacatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgt 39954345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 363
Target Start/End: Original strand, 4786338 - 4786377
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgatttt 4786377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 8343376 - 8343285
Alignment:
Q  323 acgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgt 414  Q
    ||||||| ||||| | ||||||||||||||||||||||||||| || ||  ||||| |||||| ||||  |||||  |||||||| ||||||    
T  8343376 acgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcgtgtccgatgt 8343285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 395
Target Start/End: Complemental strand, 24613579 - 24613509
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtg 395  Q
    |||||||||||| | |||||||||| ||||||||||||||| ||||| | |||||||||||| |||| ||||    
T  24613579 cgacaccgacacttgtaattacacttaattatgtgatttttcaaattat-tagctgtgtcggtgtgtcagtg 24613509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 308 - 363
Target Start/End: Original strand, 25172682 - 25172737
Alignment:
Q  308 gtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||| ||| ||||||||||||||||||||||||||| |||| ||||| |||||    
T  25172682 gtgtccgacattgacacgacaccgacacatataattacattaaaatatgtaatttt 25172737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 363
Target Start/End: Original strand, 33405384 - 33405423
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  33405384 cgacaccgacacatataattacactaaattatgtgttttt 33405423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 365
Target Start/End: Complemental strand, 8343032 - 8342990
Alignment:
Q  323 acgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||||| | |||||||||||||||||||||||||||    
T  8343032 acgacaccgacacttgtaattacactaaattatgtgatttttt 8342990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 362
Target Start/End: Complemental strand, 8847315 - 8847277
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattt 362  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  8847315 cgacaccgacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 358
Target Start/End: Original strand, 16641921 - 16642008
Alignment:
Q  265 gacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtg 358  Q
    |||||||||||||| | | ||||| | ||||||||||| ||| |||||||      |||||||||||||||||||||  |||||||||||||||    
T  16641921 gacactcctcggattaggtgtgtcccggtgttagacacatgtcgtgtccg------acacgacaccgacacatataacgacactaaattatgtg 16642008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 383
Target Start/End: Complemental strand, 25566903 - 25566841
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtc 383  Q
    ||||||||||||||| | |||||||||| |||||||||||||||| || ||  ||||||||||    
T  25566903 acacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 25566841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 363
Target Start/End: Original strand, 29447043 - 29447149
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| |||||||||||| |||| | |||||||   |||| |||||| ||| ||||||| || ||||| ||||||||||| | || ||||| | |||||||    
T  29447043 gaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaattatg 29447142  T
Q  357 tgatttt 363  Q
    |||||||    
T  29447143 tgatttt 29447149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 926788 - 926892
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||| |||||||||||| ||  ||| |||||| | || ||  |||  |||| ||||||| ||||||| |||||||| || ||||||||| ||    
T  926788 cgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcg 926887  T
Q  424 tatcc 428  Q
    |||||    
T  926888 tatcc 926892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 370
Target Start/End: Original strand, 7472514 - 7472562
Alignment:
Q  323 acgacaccgacacatataattacactaaattatgtgattt-tttaaatt 370  Q
    ||||||| |||||||||||||||||||| ||||||||||| ||||||||    
T  7472514 acgacacagacacatataattacactaatttatgtgatttctttaaatt 7472562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 16867202 - 16867238
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgt 357  Q
    ||||||||||||||| |||||||||||||||||||||    
T  16867202 acacgacaccgacacttataattacactaaattatgt 16867238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 396
Target Start/End: Complemental strand, 22596053 - 22595981
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgt 396  Q
    ||||||| |||| | |||||||||| |||||||| ||||||| || ||  ||||||||||||||||| |||||    
T  22596053 cgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 428
Target Start/End: Original strand, 28384990 - 28385098
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtg 419  Q
    |||| |||||||||||||||||||||||| ||||||| ||||| || |  ||  || | |||||||  ||| ||||||| ||||||||||  | ||||||    
T  28384990 gacatgacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgtgtcgtgttcagtatccgtg 28385089  T
Q  420 tccgtatcc 428  Q
    | |||||||    
T  28385090 ttcgtatcc 28385098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 34223011 - 34222967
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||    
T  34223011 cgacaccataccgacacatataattacacttaattatgtgatttt 34222967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 363
Target Start/End: Complemental strand, 14731763 - 14731732
Alignment:
Q  332 acacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||||||||||||||    
T  14731763 acacatataattacactaaattatgtgatttt 14731732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 390
Target Start/End: Original strand, 31236580 - 31236643
Alignment:
Q  327 caccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||||||||||||||||||| | |||||||||||||| | || ||  |||| ||||||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgt 31236643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 363
Target Start/End: Complemental strand, 34897144 - 34897105
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  34897144 cgacatcgacacatataattacactgaattatgtgatttt 34897105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 403
Target Start/End: Original strand, 36450754 - 36450833
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    ||||||| |||| | |||||||||| |||| ||||||||||| || ||  ||| ||||||||||||| ||||||| ||||    
T  36450754 cgacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 36450833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 5813651 - 5813585
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||||||||||| | || |||||||||| ||||||| ||||| || ||  |||||||||||||||||    
T  5813651 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgt 5813585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 363
Target Start/End: Complemental strand, 11803321 - 11803279
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||| ||||| ||||||||||||||||| ||||||||||||||    
T  11803321 acacaacaccaacacatataattacactgaattatgtgatttt 11803279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 14134757 - 14134719
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  14134757 gacaccgacatatataattacactgaattatgtgatttt 14134719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 406
Target Start/End: Original strand, 18170482 - 18170564
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtg 406  Q
    |||||||||||  | |||||||| | |||||||| ||||||| || ||| ||  ||||||||||||| ||||||| |||||||    
T  18170482 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtg 18170564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 406
Target Start/End: Original strand, 18634050 - 18634132
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtg 406  Q
    |||||||||||  | |||||||| | |||||||| ||||||| || ||| ||  ||||||||||||| ||||||| |||||||    
T  18634050 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtg 18634132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 383
Target Start/End: Complemental strand, 21465538 - 21465412
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| |||||||||||||  || | |||| || | ||||| ||||||||| ||||||| ||  ||||||||||| |||| | ||||||||   ||||||     
T  21465538 gaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacacgacaccaacacttgtaattacatcgaattata 21465439  T
Q  357 tgattttttaaattttgtagctgtgtc 383  Q
    ||||||||| || ||  ||||||||||    
T  21465438 tgattttttcaaattattagctgtgtc 21465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 368
Target Start/End: Complemental strand, 22493551 - 22493509
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgattttttaaa 368  Q
    ||||||||| |||| |||||||| |||||||||||||||||||    
T  22493551 acaccgacatatatgattacactgaattatgtgattttttaaa 22493509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 27213601 - 27213523
Alignment:
Q  329 ccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||||||||||||||| | |||||||||||||| | || ||  |||| ||||||||||||  || ||| ||||||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgt 27213523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 365
Target Start/End: Complemental strand, 29358041 - 29357995
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||| ||||||||||||||||| |||| |||||||||||| |||||    
T  29358041 cgacaggacaccgacacatataaatacattaaattatgtgagttttt 29357995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 398
Target Start/End: Original strand, 30271287 - 30271365
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtcc 398  Q
    |||||||||| | ||| | ||||||||||  ||||||||||||||| || |   ||||||||||||||||| |||||||    
T  30271287 gacacgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtcc 30271365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 314
Target Start/End: Complemental strand, 3025666 - 3025609
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccg 314  Q
    |||| ||||||||||||||||| |  |||||||| |||| |||||||||| |||||||    
T  3025666 gaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccg 3025609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 4948711 - 4948670
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||||| | |||||||||| ||||||||||||||||    
T  4948711 cgacaccgacacttgtaattacactgaattatgtgatttttt 4948670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 14634127 - 14634172
Alignment:
Q  310 gtccggcatcgacacgacaccgacacatataattacactaaattat 355  Q
    ||||| ||||||||||||||| ||| ||||||||||||| ||||||    
T  14634127 gtccgacatcgacacgacaccaacaaatataattacactgaattat 14634172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 355
Target Start/End: Original strand, 12402686 - 12402722
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattat 355  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  12402686 cgacacgacaccaacacatataattacattaaattat 12402722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 73; Significance: 4e-33; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 251 - 419
Target Start/End: Complemental strand, 241726 - 241558
Alignment:
Q  251 atctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaa 350  Q
    ||||| |||| ||||||||| ||||||| | ||||||| | ||||  ||||||||| ||||||| || | |||||||||||||||  |||||||||||||    
T  241726 atctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaa 241627  T
Q  351 attatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtg 419  Q
    ||||||||||||||  || ||  ||||||||||||||||| ||||||| |||||||| || ||||||||    
T  241626 attatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtg 241558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 365
Target Start/End: Complemental strand, 348160 - 348120
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||| ||||| |||||||||||| ||||||||||||||||    
T  348160 gacacagacacctataattacacttaattatgtgatttttt 348120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 4e-33; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 251 - 427
Target Start/End: Original strand, 34784909 - 34785085
Alignment:
Q  251 atctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaa 350  Q
    ||||| |||| || ||||||||||| |||| ||||||| |||||| ||||| |||| |||||||  | ||||||||||||||||||||||||||||||||    
T  34784909 atctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaa 34785008  T
Q  351 attatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatc 427  Q
    ||||||||||||| ||||     ||| |||||||| |||| ||||||| ||||||||  |  |||||||||||||||    
T  34785009 attatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtctggggtccgtgtccgtatc 34785085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 257 - 390
Target Start/End: Original strand, 36096308 - 36096441
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| |||||||||| | || ||| ||||||| |||||| |||||||||| ||||||| ||||||||||||||||||| |||||||||||||  ||| ||    
T  36096308 gaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgcattttg 36096407  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||| ||||   | |||||||||||||||||    
T  36096408 tgattttctaaaaaatttagctgtgtcggcgtgt 36096441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 257 - 355
Target Start/End: Complemental strand, 35056994 - 35056896
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattat 355  Q
    |||| ||||||||||||| ||| | ||||||  ||||||  ||||||||| ||||||| || |||||||||||||||||||||||||||||| ||||||    
T  35056994 gaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattat 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 421
Target Start/End: Complemental strand, 15657983 - 15657826
Alignment:
Q  264 ggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||  | ||||||| | | ||  ||||||||| | ||||| |||| ||||||||||||||  | |||||||||| ||||||||||||||    
T  15657983 ggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaattatgtgatttt 15657884  T
Q  364 ttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtc 421  Q
    |  || ||  ||| || |||||||||||||||||| |||||||| || || |||||||    
T  15657883 tacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtccggtgaccgtgtc 15657826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 20242727 - 20242810
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||     ||| ||||||||||||| ||||||||||||||||    
T  20242727 cgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtccatgtcgtgt 20242810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 424
Target Start/End: Original strand, 20539672 - 20539774
Alignment:
Q  322 cacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtc 421  Q
    |||||||||||||| | ||||||||||||||||| ||||||||| || ||  ||||||||||| ||||| ||||||| |||||||| |  ||||||| ||    
T  20539672 cacgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatc 20539771  T
Q  422 cgt 424  Q
    |||    
T  20539772 cgt 20539774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 424
Target Start/End: Complemental strand, 6940310 - 6940214
Alignment:
Q  328 accgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgt 424  Q
    |||||||| | |||||||||| |||||||| | |||||||| ||  ||||||||||||||||| ||||||| |||||| || ||||||||| |||||    
T  6940310 accgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtatttgatgtccgtatccgt 6940214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 390
Target Start/End: Complemental strand, 26769644 - 26769504
Alignment:
Q  250 catctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacacta 349  Q
    |||||| |||| ||||||||||||||||| | ||||||| | ||||  ||||||||| |||||||  | ||||| ||||||||||| | ||||||||| |    
T  26769644 catctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacacca 26769545  T
Q  350 aattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
     || ||||||| |||| || ||  ||| |||||||||||||    
T  26769544 gataatgtgatattttcaaattattagttgtgtcggcgtgt 26769504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 30335476 - 30335372
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||  | ||||||||||||||||||| ||||||| || ||  ||| |||||||||||| |||||||| ||||||||  ||  ||||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtctgagatccgtgtccg 30335377  T
Q  424 tatcc 428  Q
    |||||    
T  30335376 tatcc 30335372  T

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Target: chr2; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 252 - 403
Target Start/End: Original strand, 11223792 - 11223942
Alignment:
Q  252 tctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaa 351  Q
    |||| |||| ||||||||||||| ||| | ||||||| | |||| ||||| |||| ||||||| || | ||| ||||||||||| | |||||||||| ||    
T  11223792 tctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaa 11223890  T
Q  352 ttatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||| ||||||| ||  |  |||||||||| ||||||  |||||||||||    
T  11223891 ttatgttattttttcaaaatattagctgtgtcagcgtgtctgtgtccatgtc 11223942  T

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Target: chr2; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 257 - 404
Target Start/End: Original strand, 30717463 - 30717610
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| |||||||||||| |||| | |||| || | ||||   |||||||| ||||||| || |||||||||| |||||| | |||||||||| |||||||    
T  30717463 gaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatg 30717562  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcg 404  Q
    ||||||||| || ||  ||||| ||||||  ||| ||||||| |||||    
T  30717563 tgattttttcaaattattagctttgtcggtttgtcagtgtccgtgtcg 30717610  T

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Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 427
Target Start/End: Original strand, 36756341 - 36756447
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgt 420  Q
    ||||||||||||||| |||||||||||| |||||||| |||| || || ||  ||| ||||||| ||||| ||||||  |||||| | |||||| |||||    
T  36756341 acacgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgtatccgatgttcgtgt 36756440  T
Q  421 ccgtatc 427  Q
    |||||||    
T  36756441 ccgtatc 36756447  T

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Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 405
Target Start/End: Complemental strand, 31018649 - 31018568
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgt 405  Q
    |||||||||||| |||||||||||||||| |||||||||| | || ||  |||| |||| ||||||| ||||||||||||||    
T  31018649 cgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgt 31018568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 398
Target Start/End: Complemental strand, 37419869 - 37419728
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||||||||||||| | ||||||| | ||||  ||||||  | ||||||| || ||||||||||||| ||| | |||||||||| |||| ||    
T  37419869 gaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaattttg 37419770  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtcc 398  Q
    ||||||||| || ||  | ||  ||||||||||| |||||||    
T  37419769 tgattttttcaaattatttgccatgtcggcgtgtcagtgtcc 37419728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 423
Target Start/End: Complemental strand, 21624326 - 21624226
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt-aaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtcc 422  Q
    |||||||||||| | |||||||||| |||||||  ||||||| ||| ||  ||||||||||||||||| ||||||  ||||||||||| ||||||| |||    
T  21624326 cgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatcc 21624227  T
Q  423 g 423  Q
    |    
T  21624226 g 21624226  T

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Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 18841014 - 18841096
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||||||||| | |||||||||| |||||||| ||||||| || ||  ||| |||||| |||||| ||||||||||||||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtccatgtcgtgt 18841096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 292 - 362
Target Start/End: Complemental strand, 28524517 - 28524447
Alignment:
Q  292 gtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattt 362  Q
    |||| |||||||||| ||||||| || | |||| ||| ||||||||||||||||||| |||||||||||||    
T  28524517 gtgtcagacacgtgttgtgtccgacaccaacacaacaacgacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 265 - 362
Target Start/End: Complemental strand, 41843553 - 41843462
Alignment:
Q  265 gacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattt 362  Q
    |||||||||||||||||||||||| ||||||  ||||||||| | |||      |||||| ||||||||||||||||||| ||  |||||||||||||    
T  41843553 gacactcctcggataaagcgtgtccccgtgtcggacacgtgtcgcgtc------cgacacaacaccgacacatataattataccgaattatgtgattt 41843462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 18422022 - 18421919
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgat-tttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtcc 422  Q
    |||||||||||| | |||||||||| ||||||||||| |||||||||| | ||  ||||||||||||| ||||||| |||||| | |||||| | |||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattat-taattgtgtcggcgtgtcagtgtccgtgtcgtatccgatgt-catgtcc 18421925  T
Q  423 gtatcc 428  Q
    ||||||    
T  18421924 gtatcc 18421919  T

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Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 418
Target Start/End: Original strand, 19536397 - 19536492
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt--aaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    |||||||||||| | |||||||||| ||||||||||||||||  ||||| | ||| ||||||||||||| | ||||| |||||||| || |||||||    
T  19536397 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattat-tagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 19536492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 428
Target Start/End: Original strand, 21374714 - 21374798
Alignment:
Q  339 taattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    |||||||||| |||||||| ||||||| || ||  ||||||||||||||||||||||||| ||||     || |||||||||||||||||    
T  21374714 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtc-----cggtgtccgtgtccgtatcc 21374798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 363
Target Start/End: Original strand, 32749751 - 32749864
Alignment:
Q  250 catctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacacta 349  Q
    |||||| ||||  |||||||||||  ||||| ||||||| | ||||  ||||| |||   ||||| |||||||||||||| ||||| ||| ||||||||     
T  32749751 catctatgaagcgcggacactccttagataaggcgtgtcccagtgtcggacacatgtcacgtccgacatcgacacgacactgacacttattattacactg 32749850  T
Q  350 aattatgtgatttt 363  Q
    ||||||||||||||    
T  32749851 aattatgtgatttt 32749864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 20922928 - 20922972
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaa 368  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||    
T  20922928 cgacacagacacatataattacactaaattatgtgattttctaaa 20922972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 428
Target Start/End: Complemental strand, 21616813 - 21616717
Alignment:
Q  332 acacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    ||||||||||||||||| |||||||||||||| | || ||  |||| ||||||||||||  |||||| ||||||||    |||| ||||||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtgtccgtatcc 21616717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 324
Target Start/End: Complemental strand, 24009415 - 24009343
Alignment:
Q  252 tctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacac 324  Q
    |||| |||| |||||||||||| |||||| ||||||| |||||| |||||||||| ||||||| || ||||||    
T  24009415 tctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 24009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 30527590 - 30527634
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||| |||||||||||||||||||||||||||| |||||||    
T  30527590 cgacacgataccgacacatataattacactaaattatatgatttt 30527634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 390
Target Start/End: Original strand, 12668418 - 12668489
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||||||||||||| |||||||||||| |||||||| ||||||| || ||  ||| | |||||||||||    
T  12668418 cgacacgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgt 12668489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 403
Target Start/End: Original strand, 14996218 - 14996303
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttttt--aaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    ||||| ||||||||||| | ||||||||||||||||| |||||||||  ||||| | ||||||||||||| ||| ||||||| ||||    
T  14996218 cgacaagacaccgacacttgtaattacactaaattatatgatttttttcaaattat-tagctgtgtcggcttgtcagtgtccgtgtc 14996303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 398
Target Start/End: Complemental strand, 24894453 - 24894374
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtcc 398  Q
    |||||||| ||| |||| | ||||| |||| |||||||||||||||| || ||  ||||||||||||||||| |||||||    
T  24894453 cgacacgaaaccaacacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtcc 24894374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 403
Target Start/End: Complemental strand, 37559036 - 37558957
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||||||||| | |||||||| | |||||||||||||||  || ||  ||||||||||||||||| ||||||| ||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtc 37558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 365
Target Start/End: Complemental strand, 4207940 - 4207875
Alignment:
Q  299 acacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||| ||||||| || |||||||| ||||||| ||||||||||||||||||||| | ||||||    
T  4207940 acacgtgtcgtgtccgacaccgacacgataccgaca-atataattacactaaattatgcgctttttt 4207875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 362
Target Start/End: Complemental strand, 5367251 - 5367213
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattt 362  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  5367251 cgacaccgacacatataattacactgaattatgtgattt 5367213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 403
Target Start/End: Complemental strand, 31808134 - 31808057
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgatttt-ttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||| |||||||||||||||||| |||||||||||||| ||||||| | |||| ||||||| |||| |||||| |||||    
T  31808134 acactgacacatataattacactgaattatgtgattttgttaaattat-tagcggtgtcggtgtgtcagtgtcaatgtc 31808057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 428
Target Start/End: Original strand, 34337155 - 34337280
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    ||||||||| ||||||| || ||||| ||||||||||| | ||||     |||||||||||||||||| || ||   | |||||||||||||| | ||||    
T  34337155 gacacgtgttgtgtccgacaccgacaggacaccgacacttgtaat-----taaattatgtgattttttcaaattatcaactgtgtcggcgtgtcaatgtc 34337249  T
Q  398 catgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    | |||||| | || | |||||||||||||||    
T  34337250 cgtgtcgtatacggtatccgtgtccgtatcc 34337280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 363
Target Start/End: Complemental strand, 44860382 - 44860340
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||||||||||||||||||| ||||||| ||||||    
T  44860382 acacgacaccgacacatataattacactgaattatgcgatttt 44860340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 427
Target Start/End: Original strand, 18054774 - 18054907
Alignment:
Q  295 ttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttt-ttaaattttgtagctgtgtcggcgtgttag 393  Q
    ||||||||| || |||| || || |||||||||||| |||||||||||||||||  | | ||||||||| | |||     ||||||||||| |||||  |    
T  18054774 ttagacacgcgtcgtgttcgacaccgacacgacaccaacacatataattacactgcagtttgtgattttctaaaaaaaattagctgtgtcgacgtgtcgg 18054873  T
Q  394 tgtccatgtcgtgttcgatgtccgtgtccgtatc 427  Q
    ||||| |||||||| || |||||||||| |||||    
T  18054874 tgtccctgtcgtgtccggtgtccgtgtctgtatc 18054907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 2438719 - 2438783
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgt 388  Q
    |||||||||||| | |||||||||| |||||||||||||||| || ||  |||||||||| ||||    
T  2438719 cgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtcagcgt 2438783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 15909629 - 15909705
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    ||||||||| | |||||||||||||||| |||||||| ||||| | ||  || ||||||| ||||||||| ||||||    
T  15909629 acacgacactgtcacatataattacactgaattatgtaattttctcaaaattttagctgtatcggcgtgtcagtgtc 15909705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 403
Target Start/End: Complemental strand, 23718082 - 23718006
Alignment:
Q  327 caccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||||||||||||||||||| |||||||||| ||| | || ||  |||| ||||||| |||| ||||||| ||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc 23718006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 403
Target Start/End: Complemental strand, 24105754 - 24105678
Alignment:
Q  327 caccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||||||||||||||||||| |||||||||| ||| | || ||  |||| ||||||| |||| ||||||| ||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc 24105678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 28677967 - 28677904
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgt 388  Q
    ||||||||| ||||||||||||||| |||||||||||||||| || ||  |||| ||||||||||    
T  28677967 cgacaccga-acatataattacactgaattatgtgattttttcaaattattagcggtgtcggcgt 28677904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 368
Target Start/End: Original strand, 2665897 - 2665932
Alignment:
Q  333 cacatataattacactaaattatgtgattttttaaa 368  Q
    ||||||||||||||||||||||||||||||| ||||    
T  2665897 cacatataattacactaaattatgtgattttctaaa 2665932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 18276579 - 18276476
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgt 424  Q
    |||||||||||| ||||||||||| ||||| |||||||| | || ||  |||| |||||||| | | ||||||  | |||||| || |||||||||| ||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgtgtctgt 18276480  T
Q  425 atcc 428  Q
    ||||    
T  18276479 atcc 18276476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 363
Target Start/End: Complemental strand, 18622669 - 18622626
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||| |||| |||||||||||| ||||||||||||||    
T  18622669 gacacgacaccaacacgtataattacactgaattatgtgatttt 18622626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 28596528 - 28596448
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgat-tttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||||||||| |||||||||||| | ||||||||| ||||| |||    ||||||||||||||||| | ||||| ||||||||    
T  28596528 cgacaccgacacttataattacactgacttatgtgatgtttttcaat----tagctgtgtcggcgtgtcattgtccgtgtcgtgt 28596448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 403
Target Start/End: Original strand, 30404850 - 30404929
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||| ||||||| | |||||||||| |||||||||||||||| || ||  || | |||||||||||| ||||||| ||||    
T  30404850 cgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtc 30404929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 363
Target Start/End: Original strand, 34691805 - 34691844
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||||||| |||||| |||||||    
T  34691805 cgacaccgacacatataattacactgaattatatgatttt 34691844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 363
Target Start/End: Original strand, 34714217 - 34714256
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||||||| |||||| |||||||    
T  34714217 cgacaccgacacatataattacactgaattatatgatttt 34714256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 36409630 - 36409710
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||||||||||||  ||||||||||||||||||||||||| || ||   ||| |||||||| ||| ||| ||| ||||||||    
T  36409630 gacaccgacacata--attacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgt 36409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 18889592 - 18889630
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgatttt 18889630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 365
Target Start/End: Original strand, 23058437 - 23058483
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||||||||| | ||||||||||  |||||||||||||||    
T  23058437 cgacacgacaccgacacttgtaattacactggattatgtgatttttt 23058483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 27286266 - 27286328
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgat 360  Q
    |||| |||| ||||||| |||||||| ||||  ||||| |||||||||||| |||||||||||    
T  27286266 gacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaattatgtgat 27286328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 427
Target Start/End: Complemental strand, 31284106 - 31284004
Alignment:
Q  326 acaccgacacata-taattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgt 424  Q
    ||||||||||||| |||||||| |  ||||||||||||| | || ||  |||| |||||||||||| ||||| | |||  ||| || |||||||||||||    
T  31284106 acaccgacacataataattacaatggattatgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccggtgtccgtgtccgt 31284007  T
Q  425 atc 427  Q
    |||    
T  31284006 atc 31284004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 365
Target Start/End: Complemental strand, 33153488 - 33153442
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||| ||||| | |||||||||| ||||||||||||||||    
T  33153488 cgacacgacacggacacttgtaattacactgaattatgtgatttttt 33153442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 38355888 - 38355926
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  38355888 gacaccgacacatataatcacactgaattatgtgatttt 38355926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 405
Target Start/End: Complemental strand, 15972932 - 15972851
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgt 405  Q
    |||||||||||| | |||||||||| |||| ||| ||||||| || ||  ||  ||||||||||||| ||||||| ||||||    
T  15972932 cgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtcgt 15972851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 18255980 - 18256021
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||||| | |||||||| ||||||||||||||||||    
T  18255980 cgacaccgacacttctaattacattaaattatgtgatttttt 18256021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 422
Target Start/End: Original strand, 18420419 - 18420532
Alignment:
Q  309 tgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgtt 408  Q
    |||||| ||| ||||| |||||||||| ||||||| || | |||||||||||||| | || ||  |||| |||| ||||||| ||| |   | |||||||    
T  18420419 tgtccgacatggacacaacaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagtatatgtctcgtgtt 18420518  T
Q  409 cgatgtccgtgtcc 422  Q
    || |||||||||||    
T  18420519 cggtgtccgtgtcc 18420532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 368
Target Start/End: Original strand, 28602355 - 28602392
Alignment:
Q  331 gacacatataattacactaaattatgtgattttttaaa 368  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  28602355 gacacatataattacattaaattatgtgatattttaaa 28602392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 397
Target Start/End: Original strand, 38117159 - 38117232
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    ||||||| |||| | |||||||||  || ||||||||||||| || ||  ||||||||||||||||| ||||||    
T  38117159 cgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 363
Target Start/End: Complemental strand, 39279732 - 39279695
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  39279732 acaccgacacatataattacactgaattatttgatttt 39279695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 396
Target Start/End: Original strand, 21782817 - 21782890
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgt 396  Q
    ||||||||||| ||||||  |||||||| |||||||||||||| | || ||  |||| |||||||||||| |||||    
T  21782817 acacgacaccggcacata--attacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgt 21782890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 422
Target Start/End: Complemental strand, 28412395 - 28412311
Alignment:
Q  338 ataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtcc 422  Q
    ||||||||||| |||||||||||||| | || ||  || | |||| | ||||||||||||| ||||||||  | |||||||||||    
T  28412395 ataattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgtgtcc 28412311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 365
Target Start/End: Original strand, 40361755 - 40361795
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||| ||| |||||||||||||||||||||| |||||||    
T  40361755 gacaccaacagatataattacactaaattatgtaatttttt 40361795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 4e-30; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 6401624 - 6401453
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| |||||||||||| |||||| |||| || |||||| |||||||||| ||||||| ||  |||||||||||||||||||||||||||||  ||| ||    
T  6401624 gaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtattttg 6401525  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    ||||||| ||||   | ||| |||||||||||||  |||||| ||||| || || |||||||||| ||||||    
T  6401524 tgattttctaaaaaatttagttgtgtcggcgtgtcggtgtccgtgtcgcgtccggtgtccgtgtctgtatcc 6401453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 298 - 428
Target Start/End: Complemental strand, 21522835 - 21522705
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    ||||||||| ||||||| || ||||||||||||||||  | |||||||||| |||||||| |||||||||| ||  ||||||||||||||||| ||||||    
T  21522835 gacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtc 21522736  T
Q  398 catgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    | |||||||| || || ||||||||||||||    
T  21522735 cgtgtcgtgtccggtgaccgtgtccgtatcc 21522705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 298 - 428
Target Start/End: Complemental strand, 21533401 - 21533271
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    ||||||||| ||||||| || ||||||||||||||||  | |||||||||| |||||||| |||||||||| ||  ||||||||||||||||| ||||||    
T  21533401 gacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtc 21533302  T
Q  398 catgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    | |||||||| || || ||||||||||||||    
T  21533301 cgtgtcgtgtccggtgaccgtgtccgtatcc 21533271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 320 - 428
Target Start/End: Original strand, 13287395 - 13287503
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtg 419  Q
    |||||||||||||||| | || ||||||| |||||||||||||||| || ||  || |||||||| ||||||||||||| |||||||| || ||||||||    
T  13287395 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgtg 13287494  T
Q  420 tccgtatcc 428  Q
    |||||||||    
T  13287495 tccgtatcc 13287503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 428
Target Start/End: Complemental strand, 19579818 - 19579656
Alignment:
Q  266 acactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||||| | ||||||| | ||||||||||  ||| ||||||| ||  |||||||||||||||| | ||||| ||||||||||||||||||| |    
T  19579818 acactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttct 19579719  T
Q  366 aaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
     || ||  ||||||||||||||| | ||||||| ||| || | || |||| |||| |||||||    
T  19579718 caaattattagctgtgtcggcgtatcagtgtccgtgttgtatccggtgtcggtgtacgtatcc 19579656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 257 - 390
Target Start/End: Complemental strand, 21814387 - 21814254
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||| ||| |||| |||||| ||||||| |||||  |||||||||| ||||||| || ||||||||||||||||||||||||||||||  ||| ||    
T  21814387 gaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttg 21814288  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||| ||||     |||||||||||||||||    
T  21814287 tgattttctaaaaaaattagctgtgtcggcgtgt 21814254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 257 - 398
Target Start/End: Complemental strand, 39698667 - 39698526
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||||||||||||| | ||||||| | ||||  || || ||| ||||||| || ||||||||||| ||||| | |||||||||| |||||||    
T  39698667 gaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatg 39698568  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtcc 398  Q
    ||||||||| || ||  |||||||||| |||||| |||||||    
T  39698567 tgattttttcaaattattagctgtgtcagcgtgtcagtgtcc 39698526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 424
Target Start/End: Original strand, 37328828 - 37328944
Alignment:
Q  308 gtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||||| || ||||||||||||||||||| |||||||||| |||| ||||||||||  || ||  | |||||||||| || | ||||||| ||||||||    
T  37328828 gtgtccgacaccgacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgt 37328927  T
Q  408 tcgatgtccgtgtccgt 424  Q
    ||| |||||||||||||    
T  37328928 tcggtgtccgtgtccgt 37328944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 427
Target Start/End: Original strand, 16203795 - 16203898
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    ||||||||||||||||||||||||||||||||| |||||| | || ||  |||| |||||||| ||||||||||| |||| |||||| |||| ||||| |    
T  16203795 cgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtcatgttcggtgtctgtgtctg 16203894  T
Q  424 tatc 427  Q
    ||||    
T  16203895 tatc 16203898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 257 - 399
Target Start/End: Complemental strand, 3966629 - 3966487
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||||||||||||| |  |||||| |  |||| ||||| ||| ||||||| ||  ||||||||||||||||||||||||||||| |||| ||    
T  3966629 gaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaattgtg 3966530  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtcca 399  Q
    ||||||| | || ||  |||| |||||||| ||| ||||||||    
T  3966529 tgattttctcaaattattagcggtgtcggcatgtcagtgtcca 3966487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 426
Target Start/End: Original strand, 21191056 - 21191158
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||| | |||||||||| |||||||||||||||| || ||  ||||||||||||| ||| ||||||| |||||||| || |||| |||||||    
T  21191056 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtcagtgtccg 21191155  T
Q  424 tat 426  Q
    |||    
T  21191156 tat 21191158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 368
Target Start/End: Original strand, 19452999 - 19453110
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| |||||| ||||| |||||| |||| || |||||| ||||| |||| ||||||| ||| ||||||||||||||||||||||||||  || ||| ||    
T  19452999 gaagcacggacgctccttggataaggcgtatctccgtgtgagacatgtgtcgtgtccgacattgacacgacaccgacacatataattacggtatattttg 19453098  T
Q  357 tgattttttaaa 368  Q
    ||||||| ||||    
T  19453099 tgattttctaaa 19453110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 428
Target Start/End: Complemental strand, 21542115 - 21541985
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgat-tttttaaattttgtagctgtgtcggcgtgttagtgt 396  Q
    ||||||||| ||||||| || ||||||||||||||||| | |||||||||| |||||||| || |||||||||| | ||| ||||||||| ||| | |||    
T  21542115 gacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatctttttaaattat-tagttgtgtcggcatgtcaatgt 21542017  T
Q  397 ccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    |  ||||||||  | |||||||||||||||||    
T  21542016 ctgtgtcgtgtctggtgtccgtgtccgtatcc 21541985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 253 - 428
Target Start/End: Original strand, 36642692 - 36642865
Alignment:
Q  253 ctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaat 352  Q
    |||||||| || ||||||||||  || | ||||||| ||||||  ||||||||| ||||||| || | ||| ||||||||||| |||| ||||||||||     
T  36642692 ctacgaagcaccgacactcctccaattaggcgtgtc-ccgtgtcggacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacactaaaa 36642790  T
Q  353 tatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    ||||| | ||||| || ||  || |||||||||||||| ||||||| |||||||| || ||| | |||||||||||    
T  36642791 tatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgt-cttgtccgtatcc 36642865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 257 - 363
Target Start/End: Complemental strand, 14873637 - 14873537
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||||||||||||| | ||||||| | ||||| ||||||||| | ||||| |||      ||||||||||||||||||||||||||||||||    
T  14873637 gaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgacat------gacaccgacacatataattacactaaattatg 14873544  T
Q  357 tgatttt 363  Q
    || ||||    
T  14873543 tgctttt 14873537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 337 - 424
Target Start/End: Complemental strand, 22013460 - 22013373
Alignment:
Q  337 tataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgt 424  Q
    ||||||||||||||||||||| ||||||  || ||  ||||||||||||||||| ||||||| |||||||| || ||||||| |||||    
T  22013460 tataattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgt 22013373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 41091225 - 41091296
Alignment:
Q  292 gtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||| ||| | ||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  41091225 gtgttagacacatgtcgcgtccgacattgacacgacatcgacacatataattacactgaattatgtgatttt 41091296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 403
Target Start/End: Complemental strand, 14674323 - 14674249
Alignment:
Q  329 ccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    ||||||| | ||||||||||||||||||||||||||| || ||  ||||||||||||||||| ||||||| ||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 420
Target Start/End: Original strand, 19552540 - 19552639
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    |||||||||| |||||| ||||  |||||| |||||||||||||||| || ||  || |||||||||||||| ||||||| ||||||||||| || ||||    
T  19552540 cgacacgacatcgacacttata--tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgttcggtggccgt 19552637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 15382538 - 15382432
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt---aaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgt 420  Q
    |||||||||||| | |||||| ||| |||||| |||||||||   ||||| | ||||||||||||||||| | ||||| |||||||| || |||||||||    
T  15382538 cgacaccgacacttgtaattatactgaattatatgattttttttcaaattat-tagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgt 15382440  T
Q  421 ccgtatcc 428  Q
    ||||||||    
T  15382439 ccgtatcc 15382432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 262 - 397
Target Start/End: Complemental strand, 31084438 - 31084309
Alignment:
Q  262 acggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatt 361  Q
    ||||||||||||||||| | || |||| | ||||  ||||||||| |||||||      |||||||| |||||| | |||||||| | ||||||||||||    
T  31084438 acggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccg------acacgacatcgacacttgtaattacattgaattatgtgatt 31084345  T
Q  362 ttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    |||| || ||  ||||||||||||||||| ||||||    
T  31084344 ttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 397
Target Start/End: Complemental strand, 11686023 - 11685925
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    ||||||||| ||||||| || ||| |||||||||||||||||||||||||||||||||| || ||| | || ||  |||| |||||||| ||| ||||||    
T  11686023 gacacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgtc 11685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 297 - 363
Target Start/End: Complemental strand, 18592159 - 18592093
Alignment:
Q  297 agacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||| ||||||| || ||||||||||||| |||||||||||||| | |||||||| |||||    
T  18592159 agacacgtgttgtgtccgacaccgacacgacaccggcacatataattacattgaattatgtaatttt 18592093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 33178084 - 33178018
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||||||||||| | ||||||||||||||||||||||||||| || ||  ||| |||||||||||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgt 33178018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 363
Target Start/End: Complemental strand, 36838605 - 36838563
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaatttt 36838563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 42029811 - 42029745
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||||| ||||||||||||| | |||||||||||||| |||||||| ||  |||||||||||||    
T  42029811 cgacaccgatacatataattacattgaattatgtgattttctaaattttttaattgtgtcggcgtgt 42029745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 417
Target Start/End: Complemental strand, 6247681 - 6247588
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccg 417  Q
    |||||||||||| | |||||||||| |||||||||||||||| || ||  ||| ||||||||||||| ||||| | | |||||| || ||||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccg 6247588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 428
Target Start/End: Original strand, 15410440 - 15410552
Alignment:
Q  316 catcgacacgacaccgacacatataattacactaaattatgtgatttt-ttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgt 414  Q
    ||||||||| ||||| |||||||| |||||||| ||| || | ||||| ||||||| | |||| |||||||||||| ||||||| ||||||||  |||||    
T  15410440 catcgacacaacaccaacacatatgattacactgaatcatataattttcttaaattat-tagcggtgtcggcgtgtcagtgtccgtgtcgtgtctgatgt 15410538  T
Q  415 ccgtgtccgtatcc 428  Q
    ||  ||||||||||    
T  15410539 ccacgtccgtatcc 15410552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 385
Target Start/End: Complemental strand, 7677819 - 7677703
Alignment:
Q  269 ctcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaa 368  Q
    |||||||||| | ||||||| | ||||  |||| |||  ||||| | || ||||||||||||||||| | ||||| |||| |||||||||||||||| ||    
T  7677819 ctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaa 7677720  T
Q  369 ttttgtagctgtgtcgg 385  Q
     ||  ||||||||||||    
T  7677719 attattagctgtgtcgg 7677703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 43564940 - 43564900
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttt 364  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  43564940 cgacaccgacacttataattacactaaattatgtgattttt 43564900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 21576689 - 21576756
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacac 324  Q
    |||| ||||||||||||||||| | ||||||| | |||| |||||||||| ||||||| |||||||||    
T  21576689 gaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacac 21576756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 397
Target Start/End: Complemental strand, 6035546 - 6035469
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    |||||||||||||||| ||||||||||||| |||||| | |||| | ||||| | |||| |||||||||||| ||||||    
T  6035546 cgacacgacaccgacaaatataattacactgaattatattatttctcaaattat-tagcggtgtcggcgtgtcagtgtc 6035469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 363
Target Start/End: Original strand, 6471886 - 6471928
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  6471886 acacgacacccacacatataattacactgaattatgtgatttt 6471928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 27144515 - 27144449
Alignment:
Q  331 gacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    ||||||||||||||||||||||||||||||||  | || ||  |||| |||||||||||| ||||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtc 27144449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 2436985 - 2436908
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    ||||||||||||||||||||||| |||   |||||||||||||||  || ||  |||| |||||||||||| ||||||    
T  2436985 gacacgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtc 2436908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 416
Target Start/End: Original strand, 22423807 - 22423904
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtcc 416  Q
    |||||||||||||||| ||||||||| | | |||||||||||||| | || ||  |||  ||||| | |||| ||| ||| |||||||||||||||||    
T  22423807 cgacacgacaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtcgtgttcgatgtcc 22423904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 422
Target Start/End: Complemental strand, 17123105 - 17123009
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtcc 422  Q
    ||||||||| ||||||||  |||  ||||||||||||| | || ||  |||| |||| ||||||| |||||||||||  ||| ||||||||||||||    
T  17123105 acaccgacatatataattgtacttgattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccatgttatgtccgatgtccgtgtcc 17123009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 305
Target Start/End: Original strand, 17593667 - 17593715
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtg 305  Q
    |||||||||||||||||||||| ||||||||| | ||||| ||||||||    
T  17593667 gaagtacggacactcctcggattaagcgtgtcccggtgttggacacgtg 17593715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 368
Target Start/End: Complemental strand, 39758327 - 39758287
Alignment:
Q  328 accgacacatataattacactaaattatgtgattttttaaa 368  Q
    ||||||||||||||||||||| |||||||||||||| ||||    
T  39758327 accgacacatataattacactgaattatgtgattttctaaa 39758287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 6770588 - 6770498
Alignment:
Q  338 ataattacactaaattatgtgatttt-ttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    |||| |||||| |||||||||||||| ||||||| | ||| |||||| | |||| ||||||| |||| |||||| ||||||| |||||||||    
T  6770588 ataagtacactgaattatgtgattttcttaaattat-tagttgtgtcagtgtgtcagtgtccgtgtcatgttcggtgtccgtatccgtatcc 6770498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 398
Target Start/End: Complemental strand, 10298629 - 10298554
Alignment:
Q  323 acgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtcc 398  Q
    ||||||||||||| | |||||||| |  ||||||||| ||||| || ||  ||| |||||||||||||||||||||    
T  10298629 acgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtgttagtgtcc 10298554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 14422961 - 14422880
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||| ||| || |||||||||||| ||||||||||| ||||||||| | ||||||| |||| |||| ||||||| ||||||||    
T  14422961 cgacatcgaaacttataattacactgaattatgtgat-ttttaaattat-tagctgtatcggtgtgtcagtgtccttgtcgtgt 14422880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 372
Target Start/End: Original strand, 25978983 - 25979018
Alignment:
Q  337 tataattacactaaattatgtgattttttaaatttt 372  Q
    ||||| ||||||||||||||||||||||||||||||    
T  25978983 tataactacactaaattatgtgattttttaaatttt 25979018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 363
Target Start/End: Original strand, 28588674 - 28588713
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgatttt 28588713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 390
Target Start/End: Original strand, 30098978 - 30099104
Alignment:
Q  253 ctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaat 352  Q
    |||||||| ||| |||||||| |||||| ||||||| |||||| |||||||||| || ||||           ||||||||||||||||||||||  |||    
T  30098978 ctacgaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccg-----------acaccgacacatataattacacagaat 30099066  T
Q  353 tatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||| |||| ||||||   | ||| |||||||||||||    
T  30099067 tatgcgattgtttaaaaaatttagttgtgtcggcgtgt 30099104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 363
Target Start/End: Original strand, 30502388 - 30502427
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  30502388 cgacaccgacacatataattacactgaattaagtgatttt 30502427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 363
Target Start/End: Original strand, 30542731 - 30542770
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  30542731 cgacaccgacacatataattacactgaattaagtgatttt 30542770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 400
Target Start/End: Complemental strand, 42893418 - 42893343
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccat 400  Q
    ||||||||||| | ||||||||||  ||||||||||||||| || ||  |||||||||||| ||||  ||||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgtccgtgtccat 42893343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 21351900 - 21351982
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatg 401  Q
    ||||| ||||||||||| | |||||||||| |||||||||| |||||  | ||  ||| |||||||| |||| ||||||||||    
T  21351900 cgacatgacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtccatg 21351982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 357
Target Start/End: Original strand, 24037750 - 24037788
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgt 357  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  24037750 cgacacgacaccgacacatataagtatactaaattatgt 24037788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 428
Target Start/End: Original strand, 6326312 - 6326401
Alignment:
Q  339 taattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    |||||||||| |||||||| ||||| | || ||  ||||  ||||||||||| ||||||| |||||||| || | ||||||||| |||||    
T  6326312 taattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtccttatcc 6326401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 15884047 - 15884006
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||||| | |||||||||| ||||||||||||||||    
T  15884047 cgacaccgacacttgtaattacactgaattatgtgatttttt 15884006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 16374338 - 16374383
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||||||||||| |||||||||| | |||||| |||||||    
T  16374338 gacacgacaccgacacatgtaattacactgatttatgttatttttt 16374383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 363
Target Start/End: Original strand, 23012410 - 23012447
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  23012410 acaccgacacatataattacattaaattatatgatttt 23012447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 363
Target Start/End: Complemental strand, 23221040 - 23221003
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||||| || ||||||||||||||||||||    
T  23221040 acaccgacacatatgataacactaaattatgtgatttt 23221003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 363
Target Start/End: Complemental strand, 25652343 - 25652306
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  25652343 acaccgacacatatgattacactaaattatgtcatttt 25652306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 428
Target Start/End: Complemental strand, 41995515 - 41995426
Alignment:
Q  339 taattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    |||||||| | ||||||||||||||||  | ||  ||| ||||||||||||| ||||||  |||||| | |  |||||||||||||||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccgtgtccgtatcc 41995426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 19429496 - 19429452
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||| ||||||| ||| ||||||||| ||||||||||||    
T  19429496 cgacacgacagcgacacagatatttacactaagttatgtgatttt 19429452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 32426834 - 32426874
Alignment:
Q  262 acggacactcctcggataaagcgtgtcaccgtgttagacac 302  Q
    ||||||||||||||||||| |||| || |||||||||||||    
T  32426834 acggacactcctcggataaggcgtatccccgtgttagacac 32426874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 363
Target Start/End: Complemental strand, 35017085 - 35017057
Alignment:
Q  335 catataattacactaaattatgtgatttt 363  Q
    |||||||||||||||||||||||||||||    
T  35017085 catataattacactaaattatgtgatttt 35017057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 9e-28; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 251 - 421
Target Start/End: Complemental strand, 5944415 - 5944243
Alignment:
Q  251 atctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaa 350  Q
    ||||| |||| ||| ||||||||||||| | |||| || | ||||  |||| |||| ||||||| |||||||||||||||||||| |||||||||||| |    
T  5944415 atctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactga 5944316  T
Q  351 attatgtgatttttt---aaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtc 421  Q
    |||||||||||||||   ||||| | |||||||| |||||||| ||||||  |||||||| |||||||| ||||    
T  5944315 attatgtgattttttttcaaattat-tagctgtggcggcgtgtcagtgtctgtgtcgtgtccgatgtccttgtc 5944243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 257 - 390
Target Start/End: Complemental strand, 25934742 - 25934609
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| |||||||||||| |||||| |||| || |||||| |||||||||| ||||||| || |||||||| |||||||||||||||||||||  ||| ||    
T  25934742 gaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtattttg 25934643  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||| || |   | |||||||||||||||||    
T  25934642 tgattttctagaaaatttagctgtgtcggcgtgt 25934609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 265 - 428
Target Start/End: Original strand, 1486656 - 1486813
Alignment:
Q  265 gacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttt 364  Q
    |||||||||||||| | ||||||| | ||||  ||||||||| |||||||      ||||||||||||||| |||||||||||| |||||||||||||||    
T  1486656 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccg------acacgacaccgacacttataattacactgaattatgtgattttt 1486749  T
Q  365 taaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    | || ||  |||||||||| |||||| ||| ||| |||||| | || | |||||||||||||||    
T  1486750 tcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgtgtccgtatcc 1486813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 47989623 - 47989453
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||||||||||||| | ||||||| |  ||| ||||| |||| ||||||| || ||||||||||||||||| | |||||||||| |||||||    
T  47989623 gaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatg 47989524  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    ||||||||| || ||  ||  ||||||||||||| ||||||  ||||||||  | | |||||||| ||||||    
T  47989523 tgatttttttaaattatta-ttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtatccgtgtctgtatcc 47989453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 407
Target Start/End: Original strand, 5376484 - 5376583
Alignment:
Q  308 gtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttt-ttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtg 406  Q
    ||||||| |||||||||||||||||||| | |||||||||| |||||||| ||||| ||||||| | |||| |||||||||||||||||||| |||||||    
T  5376484 gtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattat-tagcggtgtcggcgtgttagtgtccgtgtcgtg 5376582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 257 - 420
Target Start/End: Complemental strand, 40917875 - 40917714
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||| ||||||||| | ||||||| | ||||  ||||||||| ||||||  || |||||||||||||| || | |||||||||| |||  ||    
T  40917875 gaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaat--tg 40917778  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgt 420  Q
    ||||||||| || ||  ||||||||||||||||| ||| ||| |||||||| || |||||||||    
T  40917777 tgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgtgt 40917714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 6612155 - 6612274
Alignment:
Q  308 gtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||||| |||||||||||||||||||| | |||||||||| |||||||| ||||||| || ||  || |||| ||||||||| | ||||| ||||||||    
T  6612155 gtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgt 6612254  T
Q  408 tcgatgtccgtgtccgtatc 427  Q
     || ||| ||||||||||||    
T  6612255 ccggtgttcgtgtccgtatc 6612274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 428
Target Start/End: Original strand, 398772 - 398869
Alignment:
Q  331 gacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    ||||| |||||||||||| |||||||||||||||| || ||  |||| |||||||||||| ||||||| |||||||| || |||||| ||||||||||    
T  398772 gacacctataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatcc 398869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 363
Target Start/End: Complemental strand, 9828170 - 9828064
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||||||||||||| |  |||||| | ||||  ||||||||| ||||| | ||  ||||||||||||||||||| ||||||||| |||||||    
T  9828170 gaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaattatg 9828071  T
Q  357 tgatttt 363  Q
    |||||||    
T  9828070 tgatttt 9828064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 262 - 407
Target Start/End: Complemental strand, 34315833 - 34315688
Alignment:
Q  262 acggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatt 361  Q
    ||||| ||||||| |||||  ||||||| ||| ||||||| |||| |||| || || ||| |||| ||||||||||||||||||||  ||||||||  ||    
T  34315833 acggagactcctcagataagacgtgtcaacgtattagacatgtgtcgtgttcgacaccgatacgataccgacacatataattacaccgaattatgtagtt 34315734  T
Q  362 ttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||||   | ||||||||||||| ||| ||| ||| ||||||||    
T  34315733 ttttaaaaaatttagctgtgtcggcatgtcagtatccgtgtcgtgt 34315688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 319 - 428
Target Start/End: Complemental strand, 38503384 - 38503275
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    ||||| |||||||||||||||||||||||| || ||| ||||||| | || ||  |||| ||||||| |||||||||||| |||| ||| |  |||||||    
T  38503384 cgacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtccgt 38503285  T
Q  419 gtccgtatcc 428  Q
    ||||||||||    
T  38503284 gtccgtatcc 38503275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 44482310 - 44482250
Alignment:
Q  303 gtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||| ||||||| || |||||||||||||||||||||||||||||| ||||||||||||||    
T  44482310 gtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgatttt 44482250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 329 - 428
Target Start/End: Original strand, 10577740 - 10577839
Alignment:
Q  329 ccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    ||||||||||||||||||||  ||| ||||||||| ||||     |||||||||||||||||  |||||| |||||||| || |||||||||||||||||    
T  10577740 ccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgtgtccgtatcc 10577839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 324 - 403
Target Start/End: Original strand, 46348383 - 46348462
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||||||||| | ||||||||||||||||| ||||||||| || ||  ||||||||||||||||| ||||||| ||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 46348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 363
Target Start/End: Original strand, 6414935 - 6415040
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||||||||||||| ||  ||||| | |||| |||||||||| ||||||| |||||| | ||||||||||||| |||||| |||  ||||||    
T  6414935 gaagcacggacactcctcggatgaaatgtgtcgcggtgtcagacacgtgtcgtgtccgacatcga-atgacaccgacacatctaattaaactgtattatg 6415033  T
Q  357 tgatttt 363  Q
    |||||||    
T  6415034 tgatttt 6415040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 422
Target Start/End: Complemental strand, 15323225 - 15323124
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgt 420  Q
    |||||| || ||||| || |||||||||||||||||||||||||| || ||  || |||| ||| | ||| |||||||||||||||| || |||||||||    
T  15323225 acacgatacagacacttacaattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcgtgtccggtgtccgtgt 15323126  T
Q  421 cc 422  Q
    ||    
T  15323125 cc 15323124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 397
Target Start/End: Original strand, 22881616 - 22881689
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    |||||||||||| | ||||||||||||||||||||||||||| || ||  ||| ||||||||||||| ||||||    
T  22881616 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 390
Target Start/End: Original strand, 32461397 - 32461529
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||||| || |||| | ||||||| | |||| |||||||||| ||||||| || |||||| ||||| |||| | |||||||| |||||||||    
T  32461397 gaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac-acaccaacacttgtaattacattaaattatg 32461495  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||||| || ||  ||| |||| ||||||||    
T  32461496 tgattttttcaaattattagttgtgccggcgtgt 32461529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 363
Target Start/End: Complemental strand, 34371798 - 34371733
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||| || |||| || | |||||||||||||||||||||||||||| ||||||||||||||    
T  34371798 gacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgatttt 34371733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 406
Target Start/End: Original strand, 9629874 - 9629982
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    |||| |||| ||||||| |||||||||||||||||||| |||||| ||||| |||||| ||||||| | || ||  |||| ||||||  ||||  |||||    
T  9629874 gacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgatgtgtcggtgtc 9629973  T
Q  398 catgtcgtg 406  Q
    |||||||||    
T  9629974 catgtcgtg 9629982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 39953146 - 39953210
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgt 388  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| ||  |||| ||||||||||    
T  39953146 cgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcggcgt 39953210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 42359449 - 42359553
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||| | |||||||||| |||| ||||||||||| || ||  ||| |||||| |||||| ||||||| ||| |||| || ||| ||||||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgtacggtgttcgtgtccg 42359548  T
Q  424 tatcc 428  Q
    |||||    
T  42359549 tatcc 42359553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 390
Target Start/End: Complemental strand, 113363 - 113292
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||||||||||| |||| | |||||||||| |||||||||||||||| || ||  |||||||||||||||||    
T  113363 cgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 113292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 424
Target Start/End: Original strand, 10572586 - 10572689
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgt 420  Q
    |||| |||||||||||| |||||||||  |||||||||||||| | || ||  |||  |||||||||||| ||||| |||||||||| || ||||||| |    
T  10572586 acacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtat 10572685  T
Q  421 ccgt 424  Q
    ||||    
T  10572686 ccgt 10572689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 427
Target Start/End: Original strand, 13011230 - 13011319
Alignment:
Q  339 taattacactaaattatgtgatttttt--aaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatc 427  Q
    |||||||||| ||||||||||||||||  ||||| | ||||||||||||| ||| ||||| | ||||||||||| |||||||||| |||||    
T  13011230 taattacacttaattatgtgatttttttcaaattat-tagctgtgtcggcatgtcagtgttcgtgtcgtgttcggtgtccgtgtctgtatc 13011319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 363
Target Start/End: Complemental strand, 25361961 - 25361906
Alignment:
Q  308 gtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||| || ||||||||||| |||||||||||||||||| ||||||||||||||    
T  25361961 gtgtccgacaccgacacgacactgacacatataattacactgaattatgtgatttt 25361906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 403
Target Start/End: Original strand, 18556389 - 18556535
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||||| ||||||| | ||||||| | ||||  || |||||| | ||| | || || ||||||||| | || | |||||||| |||||||||    
T  18556389 gaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaattatg 18556488  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||| |||| || ||  ||||||||||||||||| ||||||| ||||    
T  18556489 tgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 390
Target Start/End: Original strand, 22515887 - 22515953
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||||||||||| | ||||||||||||||||||||||||||| || ||  |||||||||| ||||||    
T  22515887 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgt 22515953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 363
Target Start/End: Complemental strand, 25272544 - 25272502
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  25272544 acacgacaccgacacttataattacactaaattatgtgatttt 25272502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 403
Target Start/End: Complemental strand, 36878519 - 36878441
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    ||||||||||| |||||||||||| |||||||||||||| | || ||  |||| |||||||||||| |||||| |||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtc 36878441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 48450592 - 48450670
Alignment:
Q  329 ccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||||| | ||||||||||||||||||| ||||||| || ||  ||||||||| ||||||| ||||||| ||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgt 48450670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 9709879 - 9709775
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||||||||||||||   |||||||||||||| | || ||  |||| |||| ||| ||| ||||||| ||||||||  ||||||| |||| |    
T  9709879 cgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtctgatgtccatgtctg 9709780  T
Q  424 tatcc 428  Q
    |||||    
T  9709779 tatcc 9709775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 407
Target Start/End: Original strand, 14359537 - 14359604
Alignment:
Q  339 taattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||||||||||||||||||||||| ||||| | |||||||||||||||||  |||||  ||||||||    
T  14359537 taattacactaaattatgtgatttttcaaattat-tagctgtgtcggcgtgtccgtgtctgtgtcgtgt 14359604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 30749899 - 30749855
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaa 368  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||    
T  30749899 cgacaccgacacatataattacactgaattatgtgattttctaaa 30749855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 30771350 - 30771306
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaa 368  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||    
T  30771350 cgacaccgacacatataattacactgaattatgtgattttctaaa 30771306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 34712378 - 34712422
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||    
T  34712378 cgacacgacactgacacatataattacactaaattatgttatttt 34712422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 38078661 - 38078760
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||| | |||||||| | |||||||||||||||| || ||  ||||||||||| ||||| |||||     |||||| || ||||||||||||    
T  38078661 cgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgt-----tcgtgtccggtgtccgtgtccg 38078755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 424
Target Start/End: Original strand, 39130767 - 39130867
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||||||||||||||||||||||| | ||||| |||| ||  ||   ||||| |||||| | | |||||||||||| || ||||||| ||||    
T  39130767 cgacaccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgtatccg 39130866  T
Q  424 t 424  Q
    |    
T  39130867 t 39130867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 403
Target Start/End: Complemental strand, 52903308 - 52903229
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttt-ttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||| | || | || ||||||||||||||||| ||||    
T  52903308 cgacaccgacacatataattacactgaattatatgattttattaaattat-taacggtatcggcgtgttagtgtccgtgtc 52903229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 2896122 - 2896225
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgt 424  Q
    |||||||||| |||||  |||||| |||||||||||||| | || ||  |||| |||||||||||| ||||||| ||| |||| || |||||||| | ||    
T  2896122 gacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccgttgtccgtgactgt 2896221  T
Q  425 atcc 428  Q
    ||||    
T  2896222 atcc 2896225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 320 - 407
Target Start/End: Complemental strand, 6427413 - 6427326
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||||||||| ||||||||||||||| | |||||||||||||| | || ||  |||| |||| ||||||| ||||||| || |||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgt 6427326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 320 - 363
Target Start/End: Original strand, 7918207 - 7918250
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||| |||||||||||||||||| ||||||||||||||    
T  7918207 gacacgacactgacacatataattacactgaattatgtgatttt 7918250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 13997940 - 13997901
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttt 13997901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 363
Target Start/End: Original strand, 14332642 - 14332681
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  14332642 cgacaccgagacatataattacactaaattatgtgatttt 14332681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 320 - 363
Target Start/End: Original strand, 20157346 - 20157389
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||||||||||| |||||||| ||||||||||||||    
T  20157346 gacacgacaccgacacatatgattacactgaattatgtgatttt 20157389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 303 - 428
Target Start/End: Original strand, 31694689 - 31694814
Alignment:
Q  303 gtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttttt---aaattttgtagctgtgtcggcgtgttagtgtcca 399  Q
    |||| ||||||| || ||||||||||||||||| | |||||| ||| ||||||||||||||||   ||||| | ||||| ||||| ||| | ||||||      
T  31694689 gtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttttttcaaattat-tagctatgtcgacgtatcagtgtc-- 31694785  T
Q  400 tgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    |||||||| || ||||||| |||||||||    
T  31694786 tgtcgtgtccggtgtccgtatccgtatcc 31694814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 265 - 340
Target Start/End: Original strand, 41597422 - 41597497
Alignment:
Q  265 gacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatata 340  Q
    ||||||||| ||||||||||| || |||||| |||||||||| ||||||| ||  ||||| ||||| |||||||||    
T  41597422 gacactccttggataaagcgtatccccgtgtcagacacgtgtcgtgtccgacacggacacaacaccaacacatata 41597497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 397
Target Start/End: Complemental strand, 13436517 - 13436444
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattt-tttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    ||||||| ||||||||||||||||| |||||||||||||  ||||||| | |||| ||||||||||||| |||||    
T  13436517 cgacaccaacacatataattacactgaattatgtgatttccttaaattat-tagcagtgtcggcgtgttcgtgtc 13436444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 370
Target Start/End: Original strand, 15449216 - 15449278
Alignment:
Q  308 gtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaatt 370  Q
    ||||||| || ||| ||||||| ||||| | |||||||||||||||||||||||||| |||||    
T  15449216 gtgtccgacaccgatacgacacagacacttgtaattacactaaattatgtgatttttcaaatt 15449278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 390
Target Start/End: Original strand, 24577182 - 24577252
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||||||||||||||| | |||||||||| |||||||||||||||| || ||  ||| |||||| ||||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgt 24577252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 365
Target Start/End: Original strand, 35919271 - 35919317
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  35919271 cgacacgacacggacacttataattacactgaattatgtgatttttt 35919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 398
Target Start/End: Complemental strand, 37598890 - 37598817
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtcc 398  Q
    |||||||||||| |||||||||||| |||| ||||||||||| || ||  ||| ||||||||||||| |||||||    
T  37598890 cgacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtcc 37598817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 398
Target Start/End: Complemental strand, 1815315 - 1815242
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtcc 398  Q
    ||||||||||| | |||||||||| ||||||||||||||||||| |   ||  ||||||||||||| |||||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 1815242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 363
Target Start/End: Original strand, 1864882 - 1864919
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgatttt 1864919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 7353493 - 7353534
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||| |||||||||||||||||||||| |||||||    
T  7353493 cgacaccgacatatataattacactaaattatgtaatttttt 7353534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 363
Target Start/End: Original strand, 12713301 - 12713366
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||| |||| || || |||||  ||||| | ||||||||||||||||||||||||||||||    
T  12713301 gacacgtgttgtgtacgacaccgacataacaccaatacatataattacactaaattatgtgatttt 12713366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 363
Target Start/End: Original strand, 12717392 - 12717457
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||| |||| || || |||||  ||||| | ||||||||||||||||||||||||||||||    
T  12717392 gacacgtgttgtgtacgacaccgacataacaccaatacatataattacactaaattatgtgatttt 12717457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 407
Target Start/End: Complemental strand, 21378635 - 21378554
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||||||| | |||||||||| |||||||| ||||||| |||||  |||||||||||| ||||   ||||| ||||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgtgtcgtgt 21378554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 372
Target Start/End: Complemental strand, 2784614 - 2784566
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgatttt-ttaaatttt 372  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  2784614 gacaccgacacatataattatactcaattatgtgattttcttaaatttt 2784566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 365
Target Start/End: Original strand, 5898267 - 5898307
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  5898267 gacaccgacgcatataattacactgaattatgtgatttttt 5898307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 16164312 - 16164356
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||    
T  16164312 acacgacaatgacacatataattacattaaattatgtgatttttt 16164356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 28273065 - 28273129
Alignment:
Q  301 acgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||| ||||||| |||||| | ||||||||||| | |||||||||| |||||| |||||||||    
T  28273065 acgtgtcgtgtccgacatcgataggacaccgacacttgtaattacactgaattatatgatttttt 28273129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 48148034 - 48148078
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||||||| ||||||||||||| |||||| |||||||||    
T  48148034 acacgacaccgacatatataattacactgaattatatgatttttt 48148078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 420
Target Start/End: Original strand, 16927186 - 16927281
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgt 420  Q
    |||||| ||| ||||||||||||| |||||| ||||||||| || ||  ||||| || || ||||| ||||||  ||||||||| |||||| ||||    
T  16927186 gacaccaacatatataattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtcgtgtttgatgtctgtgt 16927281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 390
Target Start/End: Original strand, 19058856 - 19058922
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgat-tttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||||||||||| | |||||||||| |||||||| || |||||||||| | |||||||||||||||||    
T  19058856 cgacaccgacacttgtaattacactgaattatgttatctttttaaattat-tagctgtgtcggcgtgt 19058922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 426
Target Start/End: Original strand, 21366039 - 21366122
Alignment:
Q  343 tacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtat 426  Q
    |||||| |||||||| |||||||||| ||  |||||||| ||||||||  |||| | ||||||||||| ||| | |||||||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtgccggcgtgtcggtgttcgtgtcgtgttcggtgttcatgtccgtat 21366122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 390
Target Start/End: Original strand, 29163381 - 29163447
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttt-ttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||||||||||||||||| | | ||||||||||||||  |||||||| |||| ||||||||||||    
T  29163381 cgacaccgacacatataattaaattgaattatgtgattttcctaaatttt-tagcggtgtcggcgtgt 29163447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Original strand, 34257914 - 34257949
Alignment:
Q  328 accgacacatataattacactaaattatgtgatttt 363  Q
    ||||||| ||||||||||||||||||||||||||||    
T  34257914 accgacatatataattacactaaattatgtgatttt 34257949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 363
Target Start/End: Complemental strand, 40181930 - 40181891
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||| ||||||||||||||| ||||||||||||||    
T  40181930 cgacaccgatacatataattacactgaattatgtgatttt 40181891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 368
Target Start/End: Original strand, 45534187 - 45534234
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgattttttaaa 368  Q
    |||| ||||||||| ||||| |||||||||||||||||||||| ||||    
T  45534187 acaccacaccgacatatatacttacactaaattatgtgattttctaaa 45534234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 428
Target Start/End: Original strand, 48040465 - 48040566
Alignment:
Q  328 accgacacatataattacactaaattatgtga--ttttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgta 425  Q
    |||||||| | || |||||||||| |||||||  ||||| ||||| | || |||||||||||||| ||||||| |||||||| || ||||||| ||| ||    
T  48040465 accgacacttgtatttacactaaaatatgtgacctttttcaaattat-tatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccata 48040563  T
Q  426 tcc 428  Q
    |||    
T  48040564 tcc 48040566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 390
Target Start/End: Original strand, 1704988 - 1705058
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||||||||||||||| | ||||||| || |||||||||||||||| || ||  ||| |||||||| ||||    
T  1704988 gacacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgt 1705058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 358
Target Start/End: Complemental strand, 2218302 - 2218264
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtg 358  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  2218302 gacacgacaccgacacttgtaattacactaaattatgtg 2218264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 398
Target Start/End: Complemental strand, 9103698 - 9103625
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtcc 398  Q
    |||||||||||| | || ||| |||||||||||||||||||| || ||  || |||||||||||||| |||||||    
T  9103698 cgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtcc 9103625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 420
Target Start/End: Original strand, 15641028 - 15641126
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttt-ttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    ||||||||||||| |  |||| ||||||| ||| |||||||||| ||||||| | |||| |||||||| ||| ||||||| |||| ||| ||||||||||    
T  15641028 gacacgacaccgata--tatagttacactgaatcatgtgattttcttaaattat-tagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtccgt 15641124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 23636050 - 23636132
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||||||||||| ||||||||| |||||||| ||||| | || ||| | || || ||||||||| | ||||| ||||||||    
T  23636050 gacaccgacacatacaattacactgaattatgtaattttctcaaatttttggcggtttcggcgtgtcaatgtccgtgtcgtgt 23636132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 398
Target Start/End: Original strand, 31672895 - 31672969
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtcc 398  Q
    ||||||||| || | |||||||||| ||||| |||||||||| || ||  |||||||||||| |||| |||||||    
T  31672895 cgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcc 31672969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 6332732 - 6332683
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgattttttaaatt 370  Q
    |||||||||||| || | |||||||||| ||||||||||||||| |||||    
T  6332732 acacgacaccgatacttgtaattacactgaattatgtgatttttcaaatt 6332683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 363
Target Start/End: Complemental strand, 10233310 - 10233273
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgatttt 363  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  10233310 acacagacacatataattacactgaattatgtgatttt 10233273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 390
Target Start/End: Original strand, 12443469 - 12443526
Alignment:
Q  333 cacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||||| ||||||||| |||||||||||||| | || ||  |||||||||||||||||    
T  12443469 cacatacaattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgt 12443526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 428
Target Start/End: Original strand, 16297298 - 16297387
Alignment:
Q  339 taattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    |||||||||| |||| ||||||||||| |  ||  | ||||||||| ||||| ||| ||| | |||||| |||||||| |||||||||||    
T  16297298 taattacactgaattttgtgattttttcatattatttgctgtgtcgacgtgtcagtatccgtatcgtgtccgatgtccatgtccgtatcc 16297387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Original strand, 17705592 - 17705625
Alignment:
Q  330 cgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||| ||||||||||||||    
T  17705592 cgacacatataattacactgaattatgtgatttt 17705625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 18337388 - 18337347
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||||| | |||||||||| ||||||||||||||||    
T  18337388 cgacaccgacacttgtaattacactgaattatgtgatttttt 18337347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 51410084 - 51410043
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||||| | |||||||||| ||||||||||||||||    
T  51410084 cgacaccgacacttgtaattacactgaattatgtgatttttt 51410043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 365
Target Start/End: Complemental strand, 6427590 - 6427482
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| |||||||||| || ||| | ||||||| | ||||  ||||||||| ||||||| |  | ||||||||| ||||| | || ||||| | |||||||    
T  6427590 gaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattgaattatg 6427491  T
Q  357 tgatttttt 365  Q
    |||||||||    
T  6427490 tgatttttt 6427482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 12612028 - 12611984
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||| || ||||||||| |||||||| ||||||||||||||||    
T  12612028 acacgatactgacacatatgattacactcaattatgtgatttttt 12611984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 363
Target Start/End: Complemental strand, 29229521 - 29229481
Alignment:
Q  324 cgacaccgacacatataatta-cactaaattatgtgatttt 363  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  29229521 cgacaccgacacatataattaccactaaatcatgtgatttt 29229481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 365
Target Start/End: Original strand, 40258934 - 40258974
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||| | |||||||||| ||||||||||||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgatttttt 40258974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 41877470 - 41877574
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||| | ||||||||||||||||||| ||||| | || ||  |||| ||||||||||   ||||||  ||||||||  | | ||| ||||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtctggtatccatgtccg 41877569  T
Q  424 tatcc 428  Q
    |||||    
T  41877570 tatcc 41877574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 44296490 - 44296533
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||| |||| |||||||||||| |||||    
T  44296490 cgacacgacaccgacacatatgatta-actaaattatgtcatttt 44296533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 257 - 396
Target Start/End: Original strand, 4987224 - 4987363
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||||||||||||||||||||| | ||||||| | ||||  ||||||||| ||||||  || ||||||| |||| |||| | |||||||||| |||||||    
T  4987224 gaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatg 4987323  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgt 396  Q
    ||||||||| || ||  ||||||||||||||||| |||||    
T  4987324 tgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 10268487 - 10268590
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgt 424  Q
    ||||| ||||| | ||||||||||||||||||||||||||| || ||  || |||||||||||||| ||||||||||||||  ||||||||||||| |||    
T  10268487 gacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgtaatcgatgtccgtgttcgt 10268586  T
Q  425 atcc 428  Q
    ||||    
T  10268587 atcc 10268590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 292 - 428
Target Start/End: Original strand, 15796262 - 15796398
Alignment:
Q  292 gtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgtt 391  Q
    ||||| ||||||||| ||||||| || | ||||||||||||||  | |||||||||| |||||| ||||||||| || ||  || ||||||||||||||     
T  15796262 gtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtc 15796361  T
Q  392 agtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    | ||||| |||||||| || ||||||||||| |||||    
T  15796362 attgtccgtgtcgtgtccggtgtccgtgtccatatcc 15796398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 266 - 407
Target Start/End: Complemental strand, 25065024 - 25064885
Alignment:
Q  266 acactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||||||||| |||||| | |||| |||||||||| ||||||| || | |||||| ||| ||||  ||||||||||||||||||||||||||||    
T  25065024 acactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacaccaacacgataccaacac--ataattacactaaattatgtgatttttt 25064927  T
Q  366 aaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
     || |   |||| |||||||||||| | ||||  ||||||||    
T  25064926 caaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgt 25064885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 390
Target Start/End: Original strand, 34185056 - 34185189
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||||||||||||| | ||||||| | ||||  ||||| |||  |||||| ||| |||||||||||||||| | |||||||||| |||| ||    
T  34185056 gaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaattgtg 34185155  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||||| || ||  |||| ||||||||||||    
T  34185156 tgattttttgaaattattagccgtgtcggcgtgt 34185189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 16000016 - 16000120
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||| | || ||||||| |||||||| ||||||| || ||  ||| ||||||||||||| ||||||  ||||||||||| ||||||||||||    
T  16000016 cgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtgtccg 16000115  T
Q  424 tatcc 428  Q
    |||||    
T  16000116 tatcc 16000120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 14209197 - 14209106
Alignment:
Q  299 acacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||||||| ||||||| || ||||||||||| ||||| | |||||||||| ||||||||||||||||||| ||  ||| |||||||||||||    
T  14209197 acacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgt 14209106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 419
Target Start/End: Original strand, 41961570 - 41961745
Alignment:
Q  244 actttacatctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataatt 343  Q
    |||||| | ||| |||| ||||||||| ||||||| | ||||||| | ||||  ||||||||| |||||||  | ||||||||||||||||| | |||||    
T  41961570 actttatacctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaatt 41961669  T
Q  344 acactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtg 419  Q
    ||||  ||| ||||||| |||| || ||  ||| |||| |||||||| ||||||  |||||||| || ||||||||    
T  41961670 acaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtccggtgtccgtg 41961745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 330 - 428
Target Start/End: Original strand, 35994744 - 35994841
Alignment:
Q  330 cgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    |||||| | |||||||||| ||||||||||||||| ||||| | ||||||||||||| ||| | |||||||||||||| || ||||| |||||||||||    
T  35994744 cgacacttgtaattacactgaattatgtgatttttcaaattat-tagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtccatgtccgtatcc 35994841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 322 - 419
Target Start/End: Complemental strand, 28918062 - 28917965
Alignment:
Q  322 cacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtg 419  Q
    |||||||||||||| | |||||||||| |||||||||||||||| || ||  ||||| ||||||||||| ||| ||| |||||||| || ||||||||    
T  28918062 cacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgtg 28917965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 10335286 - 10335390
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||| | || |||||||||| ||||||| ||||| || ||  ||| ||||||||||||| ||||||| |||||||| || ||||||||| ||    
T  10335286 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcg 10335385  T
Q  424 tatcc 428  Q
    |||||    
T  10335386 tatcc 10335390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 38731277 - 38731173
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||||||||| |||||| ||||||||||||||||||| ||  |||| || ||| | |||  |||| |||||||||| || ||||||||||||    
T  38731277 cgacaccgacacatataactacactgaattatgtgattttttaaaattattagcggtatcgacatgtcggtgtacatgtcgtgtccgttgtccgtgtccg 38731178  T
Q  424 tatcc 428  Q
     ||||    
T  38731177 catcc 38731173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 297 - 396
Target Start/End: Complemental strand, 11666030 - 11665931
Alignment:
Q  297 agacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgt 396  Q
    |||||||||| |||||   |||| ||||||||||||||||||||||||||||||||| ||||||||| | || ||  ||||  |||||| ||||||||||    
T  11666030 agacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgttagtgt 11665931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 257 - 390
Target Start/End: Complemental strand, 35223053 - 35222931
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||||||||||||||||||||||| |||||| ||||||||||  ||||           ||||||||||||||||||||||| | |||||||    
T  35223053 gaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtc-----------cgacaccgacacatataattacattgaattatg 35222965  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||| ||||  |  ||| |||||||||||||    
T  35222964 tgattttctaaaaatgttagttgtgtcggcgtgt 35222931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 418
Target Start/End: Original strand, 8587021 - 8587115
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    |||||||||||| | |||||||||| |||||||||||||||| || ||  ||| ||||||||||||| ||||||| |||| ||| || |||||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgt 8587115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 418
Target Start/End: Complemental strand, 55401134 - 55401040
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    |||||||||||| | ||||||||||||||||||||||||||| || ||  ||| ||||||||||| | ||||||| |||||| | || |||||||    
T  55401134 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgt 55401040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 424
Target Start/End: Complemental strand, 8383316 - 8383216
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||| |||||||||||| |||||| ||||||| | || ||  |||| |||||||||||| | ||||| |||||||| |  ||||||||||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtccg 8383217  T
Q  424 t 424  Q
    |    
T  8383216 t 8383216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 15314873 - 15314917
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  15314873 acacgacaccaacacatataattacactaaattatgtgatttttt 15314917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 321 - 408
Target Start/End: Complemental strand, 28678365 - 28678278
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgatttt-ttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgtt 408  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||||| | |||| | |||||| ||| |||||| ||||||||||    
T  28678365 acacgacaccgacacatacaattatactaaattatgtgattttattaaattat-tagcagcgtcggcatgtcagtgtctatgtcgtgtt 28678278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 428
Target Start/End: Original strand, 750592 - 750723
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt-tagtgt 396  Q
    ||||||||| |||||||  | ||||||||||||||||| | ||||| ||   ||||||||||| |||| || ||  ||| ||||||| |||||  |||||    
T  750592 gacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagtgt 750691  T
Q  397 ccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    || |||||||| || |||||||||||||||||    
T  750692 ccgtgtcgtgtccggtgtccgtgtccgtatcc 750723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 319 - 397
Target Start/End: Complemental strand, 14829753 - 14829676
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    ||||||||||||||||| | |||||||  | ||||||||||||||| ||||| | ||||||||||||||||| ||||||    
T  14829753 cgacacgacaccgacacttgtaattaccatgaattatgtgatttttcaaattat-tagctgtgtcggcgtgtcagtgtc 14829676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 434
Target Start/End: Complemental strand, 25093561 - 25093451
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    ||||||||||||||||||||||||| |||| ||||||||| | || |   || | |||||||||||||||||||  |||||||| || |||| ||||  |    
T  25093561 cgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtccggtgtctgtgtttg 25093462  T
Q  424 tatccttactt 434  Q
    ||||| |||||    
T  25093461 tatccgtactt 25093451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 386
Target Start/End: Complemental strand, 27505309 - 27505243
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggc 386  Q
    |||||||||||||||| | |||||||||| ||||||||||||||| ||| ||  |||||||||||||    
T  27505309 gacacgacaccgacacttgtaattacacttaattatgtgatttttaaaaattattagctgtgtcggc 27505243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 426
Target Start/End: Original strand, 4990964 - 4991069
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgt 420  Q
    ||||||| ||||||| | |||||||||| |||||||| ||||| | ||  |  |||| ||||||| |||| ||| ||| ||||||||||| |||||||||    
T  4990964 acacgacgccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgtgt 4991063  T
Q  421 ccgtat 426  Q
    ||||||    
T  4991064 ccgtat 4991069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 7928509 - 7928468
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgatttttt 7928468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 40993335 - 40993376
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  40993335 cgacaccgacacatataattacactgaattatgtgatttttt 40993376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 1509599 - 1509539
Alignment:
Q  323 acgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtc 383  Q
    ||||||||||||| | ||||||||||||||||||||||||||| || ||  ||||||||||    
T  1509599 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 11313795 - 11313839
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||  ||||||||||||||||||||||||||||||||    
T  11313795 cgacacgacactaacacatataattacactaaattatgtgatttt 11313839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 14747625 - 14747547
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttttt--aaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    |||||||||| ||| | | |||||||||||||||||||||||||||  ||||| | ||||||||||||||||| ||||||    
T  14747625 gacacgacacggacccttgtaattacactaaattatgtgatttttttcaaattat-tagctgtgtcggcgtgtcagtgtc 14747547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 403
Target Start/End: Original strand, 25948882 - 25948966
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||| || ||  |||| || ||||| ||| ||||||| ||||    
T  25948882 cgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtc 25948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 386
Target Start/End: Complemental strand, 55213047 - 55212960
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggc 386  Q
    ||||||||| ||| ||| || |||||| |||||||||| | ||||| |||||||||||||||||||||||| ||  || ||||||||||    
T  55213047 gacacgtgttgtgcccgacaccgacac-acaccgacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtcggc 55212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 268 - 355
Target Start/End: Original strand, 8039779 - 8039866
Alignment:
Q  268 actcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattat 355  Q
    |||| |||||| ||||||||| | ||||  |||| || |  |||||| || |||||||||||||||||||||||||||||| ||||||    
T  8039779 actcttcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaattat 8039866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 363
Target Start/End: Original strand, 49505154 - 49505193
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  49505154 cgacactgacacatataattacactaaattatgtgatttt 49505193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 428
Target Start/End: Original strand, 3164043 - 3164129
Alignment:
Q  342 ttacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    ||||||| |||||||||||||||| || ||  ||||||||||| ||||  | ||||| |||||||| || |||||||||| ||||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgtgtctgtatcc 3164129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 365
Target Start/End: Complemental strand, 16789143 - 16789030
Alignment:
Q  251 atctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaa 350  Q
    ||||| |||| |||||||||||||  || | | ||||| ||||||| |||| ||||  |||||| ||  ||||||||||| |||| |||||||||||| |    
T  16789143 atctatgaagcacggacactcctcaaattaggtgtgtc-ccgtgttggacatgtgtcatgtccgacactgacacgacaccaacacttataattacactga 16789045  T
Q  351 attatgtgatttttt 365  Q
    ||||| |||||||||    
T  16789044 attatatgatttttt 16789030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 419
Target Start/End: Complemental strand, 39002094 - 39001996
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtg 419  Q
    ||||||||| |||| ||||||||||| | |||||||||||||||| || ||  || |  |||||| |||| ||||| | ||||||||||| ||||||||    
T  39002094 acacgacactgacatatataattacattgaattatgtgattttttcaaattcctatccatgtcggtgtgtcagtgtacgtgtcgtgttcggtgtccgtg 39001996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 363
Target Start/End: Original strand, 10690209 - 10690301
Alignment:
Q  270 tcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||| | | ||||| |||||| |||||||||| ||||||| || | | || | ||||||| ||||||||||||| ||||||||||||||    
T  10690209 tcctcggattaggtgtgtcgccgtgtcagacacgtgttgtgtccgaca-ctaaacaataccgacaaatataattacactgaattatgtgatttt 10690301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 397
Target Start/End: Complemental strand, 21479177 - 21479104
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    ||||||||||||   |||||||||| |||| ||||||||||| || ||  ||||||||||||||||| ||||||    
T  21479177 cgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 21479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 309 - 390
Target Start/End: Complemental strand, 34910391 - 34910310
Alignment:
Q  309 tgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||||| || ||| ||||||||||| | | |||||||||| |||||||||||||||| || ||  ||| |||||||||||||    
T  34910391 tgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 34910310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 396
Target Start/End: Complemental strand, 10955011 - 10954939
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgt 396  Q
    |||||||||||| | | |||||||| |||||||||||||||| || ||  ||| ||||||||||||| |||||    
T  10955011 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 10954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 14832184 - 14832092
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||||| |||||||  | ||||||||||| ||||| | |||||||| | | |||||||||||||| || ||  ||||||| |||||||||    
T  14832184 gacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgt 14832092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 363
Target Start/End: Original strand, 32804547 - 32804579
Alignment:
Q  331 gacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||||||||||||||||||||||||    
T  32804547 gacacatataattacactaaattatgtgatttt 32804579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 363
Target Start/End: Original strand, 8789550 - 8789589
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  8789550 cgacaccgacacatataattacacggaattatgtgatttt 8789589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 424
Target Start/End: Complemental strand, 8842387 - 8842289
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgt 424  Q
    |||||||||| |||||||||||| |||||||||||||||  ||||| | |||| |||||||| ||| | | ||| |||||| | || ||||||| |||||    
T  8842387 gacaccgacatatataattacaccaaattatgtgattttcaaaattat-tagcggtgtcggcatgtcaatttccgtgtcgtatccggtgtccgtatccgt 8842289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 403
Target Start/End: Original strand, 10318035 - 10318113
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||||||||| |||| ||||||||||  |||||| ||||| || ||  ||||||||||||||||| ||||||| ||||    
T  10318035 cgacaccgacacttatatttacactaaaa-atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 10318113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 13845469 - 13845536
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacac 324  Q
    |||| |||||||||||| |||||| ||||||| |||||| |||||||| | ||||||| || ||||||    
T  13845469 gaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacac 13845536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 407
Target Start/End: Complemental strand, 14979224 - 14979157
Alignment:
Q  340 aattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||||||| |||||||||||||||| || ||  ||||||||||||||||  | ||||| ||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtgt 14979157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 421
Target Start/End: Original strand, 24205047 - 24205138
Alignment:
Q  330 cgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtc 421  Q
    |||||| ||||||||||||  ||||||| ||||| | || ||  || | |||||||||||| ||||||| |||||||| || ||||||||||    
T  24205047 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtc 24205138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 26492205 - 26492288
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||||||| || | |||||||||| |||| | ||||||||| || ||  ||||| ||||||||||| ||||||| ||||||||    
T  26492205 cgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgt 26492288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 390
Target Start/End: Complemental strand, 26508166 - 26508103
Alignment:
Q  327 caccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||||| | |||||||||| |||||||||||||||| || ||  |||||||||| ||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgt 26508103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 386
Target Start/End: Original strand, 49651781 - 49651848
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggc 386  Q
    ||||||||||||||||| | |||||||| | |||||||||||||||| || ||  |||| ||||||||    
T  49651781 cgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcggc 49651848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 18427008 - 18426942
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||||||| ||||||||||||  |||||||||||||||| || ||  |||  ||||||||||||    
T  18427008 cgacaccgacatatataattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgt 18426942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 428
Target Start/End: Original strand, 34307786 - 34307884
Alignment:
Q  330 cgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    |||||| |||||||||||| || ||||||||||| | || ||  |||| ||||| ||||||| |||||  |||| ||| || ||| |||||||||||||    
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtcatgtccggtgttcgtgtccgtatcc 34307884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 48202270 - 48202308
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  48202270 gacacagacacatataattacattaaattatgtgatttt 48202308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 8930829 - 8930874
Alignment:
Q  323 acgacaccgacacatataattacactaaattatgtgattttttaaa 368  Q
    |||||| |||||||||||||||||   |||||||||||||||||||    
T  8930829 acgacatcgacacatataattacatcgaattatgtgattttttaaa 8930874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 368
Target Start/End: Complemental strand, 14028067 - 14028022
Alignment:
Q  323 acgacaccgacacatataattacactaaattatgtgattttttaaa 368  Q
    ||||||||||||||||||||||||||  ||| ||||||||| ||||    
T  14028067 acgacaccgacacatataattacactgcattttgtgattttctaaa 14028022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 427
Target Start/End: Complemental strand, 23916004 - 23915915
Alignment:
Q  338 ataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatc 427  Q
    ||||||||| | |||| ||||||||||| || ||  ||||||||| ||| ||| ||| ||  |||||||| || ||||||||||||||||    
T  23916004 ataattacatttaattgtgtgattttttcaagttgttagctgtgttggcatgtcagtttctgtgtcgtgtccggtgtccgtgtccgtatc 23915915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 28812577 - 28812508
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||||||||||| | ||| |||||| ||||||||||||| || || ||  ||| |||||||||||||    
T  28812577 acacgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgt 28812508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 365
Target Start/End: Complemental strand, 39756299 - 39756254
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||||||||| | |||||| | ||||||||||||||||||    
T  39756299 gacacgacaccgacacttgtaattatattaaattatgtgatttttt 39756254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 2731876 - 2731832
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||| ||||  ||||||||||||||||| ||||||||||||||    
T  2731876 cgacacaacacatacacatataattacacttaattatgtgatttt 2731832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 365
Target Start/End: Complemental strand, 4201454 - 4201414
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||| ||| ||||||||||||| ||||||||||||||||    
T  4201454 gacaccaacatatataattacacttaattatgtgatttttt 4201414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 7171560 - 7171457
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    ||||||| |||| | |||||||||  |||||| |||||||| |||||    |||||||||||| ||| ||| ||| |||||||| || |||| |||||||    
T  7171560 cgacaccaacacttgtaattacaccgaattatatgatttttcaaattaca-agctgtgtcggcatgtcagtatccgtgtcgtgtccggtgtctgtgtccg 7171462  T
Q  424 tatcc 428  Q
    |||||    
T  7171461 tatcc 7171457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 407
Target Start/End: Complemental strand, 9800104 - 9800016
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||||||||||||||| || ||||||||  |||||||| ||||| | || ||  |||  |||||||||||| ||||| | ||||||||    
T  9800104 cgacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgt 9800016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 13414528 - 13414484
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaa 368  Q
    ||||||||||||||||||||||| | |||||| ||||||| ||||    
T  13414528 cgacaccgacacatataattacattgaattatttgattttctaaa 13414484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 13845525 - 13845569
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaa 368  Q
    |||||||||||||||||||||||||  ||| ||||||||| ||||    
T  13845525 cgacaccgacacatataattacactgcattttgtgattttctaaa 13845569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 16192745 - 16192789
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||| | ||||||||||||||||| |||||||| |||||    
T  16192745 cgacacgacatcaacacatataattacactgaattatgttatttt 16192789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 348
Target Start/End: Complemental strand, 25211602 - 25211574
Alignment:
Q  320 gacacgacaccgacacatataattacact 348  Q
    |||||||||||||||||||||||||||||    
T  25211602 gacacgacaccgacacatataattacact 25211574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 8857 - 8753
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||| | |||||||||||||| || ||||||||| || ||  ||||||||||||||||| ||||||| |||||||| || ||||||||||||    
T  8857 cgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccg 8758  T
Q  424 tatcc 428  Q
    |||||    
T  8757 tatcc 8753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 5e-23; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 257 - 416
Target Start/End: Original strand, 5414105 - 5414264
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| |||||||||||| |||||| | ||||| | |||| |||||||||| ||||||| ||  ||||||||||||| |||||||||||||||  ||| ||    
T  5414105 gaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgcattttg 5414204  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtcc 416  Q
    ||||||| ||||     |||||||||||||||||  |||||| |||||||| || |||||    
T  5414205 tgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtcgtgtccggtgtcc 5414264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 427
Target Start/End: Original strand, 23292986 - 23293089
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||| | |||||| ||| |||||||||||||||| || ||  ||||||||||||||||| | ||||| |||||||| || ||||||||||||    
T  23292986 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccg 23293085  T
Q  424 tatc 427  Q
    ||||    
T  23293086 tatc 23293089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 35157986 - 35158089
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgt 424  Q
    ||||||||||| ||||||||||||||||||||||||||||  || ||  ||| || |||||||||| ||||||| ||| |||| || |||||||||||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgtgtccgt 35158085  T
Q  425 atcc 428  Q
    ||||    
T  35158086 atcc 35158089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 264 - 362
Target Start/End: Original strand, 46083931 - 46084029
Alignment:
Q  264 ggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattt 362  Q
    |||||||||||  |||| ||||||| ||| || |||||||||| |||||||  |  |||||||||||||||||||||||||||||| ||||||||||||    
T  46083931 ggacactcctcttataaggcgtgtccccgcgtcagacacgtgtcgtgtccgatactgacacgacaccgacacatataattacactagattatgtgattt 46084029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 22234864 - 22234957
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttttt--aaattttgtagctgtgtcggcgtgt 390  Q
    ||||||||| ||||| | || |||||||||||||||||||| ||||||||| ||||||||||||||||  ||||||| |||| ||||||||||||    
T  22234864 gacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttt-tagcggtgtcggcgtgt 22234957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 428
Target Start/End: Original strand, 27706154 - 27706281
Alignment:
Q  301 acgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccat 400  Q
    |||||| ||||||| |||  |||||||||  |||| | ||||||||||||||||||||||||||| || ||  ||  ||||||| ||||| ||||||| |    
T  27706154 acgtgtcgtgtccgacattaacacgacactcacacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccct 27706253  T
Q  401 gtcgtgttcgatgtccgtgtccgtatcc 428  Q
    |||||||  | |||||||||||||||||    
T  27706254 gtcgtgtctggtgtccgtgtccgtatcc 27706281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 434
Target Start/End: Original strand, 2361975 - 2362087
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt-tc-gatgtccgtgtc 421  Q
    |||||||||||| | ||||||||||||||||||| ||||||| || ||  |||||||||||| |||| | |||| ||||||||| || ||||| ||||||    
T  2361975 cgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaatgtcaatgtcgtgtgtctgatgttcgtgtc 2362074  T
Q  422 cgtatccttactt 434  Q
    ||||||| |||||    
T  2362075 cgtatccgtactt 2362087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 363
Target Start/End: Complemental strand, 13134532 - 13134470
Alignment:
Q  301 acgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||| |||| || | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  13134532 acgtgttgtgttcgacgtcgacacgacatcgacacatataattacactaaattatgtgatttt 13134470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 363
Target Start/End: Original strand, 30982811 - 30982917
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| |||||||||| | |||| | ||||||| | ||||  ||||||||| ||||| | || ||||||||||||||||| |||||||||||| || ||||    
T  30982811 gaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatg 30982910  T
Q  357 tgatttt 363  Q
    |||||||    
T  30982911 tgatttt 30982917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 427
Target Start/End: Original strand, 12895274 - 12895377
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||| ||||||||||| ||||||||||||||||| || ||  ||  ||||||||||||| | ||| | |||||| | || ||||||| ||||    
T  12895274 cgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtcgtatccggtgtccgtatccg 12895373  T
Q  424 tatc 427  Q
    ||||    
T  12895374 tatc 12895377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 19482794 - 19482623
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||| ||||||||||||| | | ||||| | ||||  ||||||||| ||||||   | |||||||||||| |||| | |||||||||  |||||||    
T  19482794 gaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaattatg 19482695  T
Q  357 tgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    |||| |||| || ||  ||| ||||||||||||| ||||||  ||||||||  | |||| |||| |||||||    
T  19482694 tgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtgtctgtgttcgtatcc 19482623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 427
Target Start/End: Original strand, 44081573 - 44081680
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtg 419  Q
    |||||| ||| |||||||||||||||| |||||||| ||||||||| || ||  || |  | |||| |||| ||||||| |||||||| |||||| ||||    
T  44081573 gacacggcactgacacatataattacattaaattatatgattttttcaaattattaacgatatcggtgtgtcagtgtccttgtcgtgtccgatgttcgtg 44081672  T
Q  420 tccgtatc 427  Q
    ||||||||    
T  44081673 tccgtatc 44081680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 397
Target Start/End: Original strand, 10499270 - 10499342
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    |||||| ||||||||||||||||||||||||||||||||| | || ||| ||| |||||||| |||| ||||||    
T  10499270 cgacactgacacatataattacactaaattatgtgattttctcaagttt-tagatgtgtcggtgtgtcagtgtc 10499342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 5775353 - 5775397
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||    
T  5775353 cgacatgacaccgacacatataattacacttaattatgtgatttt 5775397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 30299008 - 30298926
Alignment:
Q  322 cacgacaccgacacatataattacactaaattatgtgatttttt--aaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||||||||||| | |||||||||| |||||||| |||||||  ||||| | ||||||||||||||||| ||||||| ||||    
T  30299008 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattat-tagctgtgtcggcgtgtcagtgtccgtgtc 30298926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 30327876 - 30327794
Alignment:
Q  322 cacgacaccgacacatataattacactaaattatgtgatttttt--aaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||||||||||| | |||||||||| |||||||| |||||||  ||||| | ||||||||||||||||| ||||||| ||||    
T  30327876 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattat-tagctgtgtcggcgtgtcagtgtccgtgtc 30327794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 407
Target Start/End: Complemental strand, 49431134 - 49431001
Alignment:
Q  264 ggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||| ||||||| | ||||| ||||||||| |||||||           |||||||||| | |||||||||| ||||||||||||||    
T  49431134 ggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccg-----------acaccgacacttttaattacactgaattatgtgatttt 49431046  T
Q  364 tt--aaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||  ||||| | ||||||||||||||||| | |||||  |||||||    
T  49431045 tttcaaattat-tagctgtgtcggcgtgtcactgtccgagtcgtgt 49431001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 298 - 365
Target Start/End: Complemental strand, 19312420 - 19312353
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||| || |||| || |||||||||||||| || |||||||||||| ||| ||||||||||||    
T  19312420 gacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatcatgtgatttttt 19312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 19500836 - 19500899
Alignment:
Q  302 cgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||| ||||||| || ||||||||||||  ||||||||||||||||||| |||||| ||||||    
T  19500836 cgtgtcgtgtccgacaccgacacgacaccatcacatataattacactaaaatatgtgttttttt 19500899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 419
Target Start/End: Complemental strand, 21945562 - 21945467
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtg 419  Q
    |||||||||||| | |||||||||| |||||||| ||||||| || ||  ||||||||||||| ||| ||||||  |||| ||| || ||||||||    
T  21945562 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtccgtg 21945467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 316 - 370
Target Start/End: Original strand, 32915597 - 32915652
Alignment:
Q  316 catcgacacgaca-ccgacacatataattacactaaattatgtgattttttaaatt 370  Q
    ||||||||||||| |||| ||||||||||||| | |||||||||||||||||||||    
T  32915597 catcgacacgacaaccgaaacatataattacattgaattatgtgattttttaaatt 32915652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 365
Target Start/End: Complemental strand, 11931344 - 11931298
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  11931344 cgacatgacatcgacacatatatttacactaaattatgtgatttttt 11931298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 426
Target Start/End: Complemental strand, 12708221 - 12708103
Alignment:
Q  309 tgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgt-agctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||| ||| ||||||||| |||||| | |||||||||| |||||| | ||||||||||  || | || |||||| |||||| ||||||   |||||||    
T  12708221 tgtccgacatagacacgacatcgacacttgtaattacactgaattatttcattttttaaaaattattagttgtgtctgcgtgtcagtgtctgcgtcgtgt 12708122  T
Q  408 tcgatgtccgtgtccgtat 426  Q
      |||||||||||||||||    
T  12708121 ctgatgtccgtgtccgtat 12708103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 418
Target Start/End: Complemental strand, 28084586 - 28084486
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttttt--aaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtcc 416  Q
    ||||||||||| ||||| | |||||||| | ||||||||||||||||  ||||| | ||||||||||||||||| || |||  |||||||| || |||||    
T  28084586 cgacacgacacagacacttgtaattacattgaattatgtgatttttttcaaattct-tagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtcc 28084488  T
Q  417 gt 418  Q
    ||    
T  28084487 gt 28084486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 36409512 - 36409558
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaatt 370  Q
    |||||||||||| ||||||||||||||||||||||| ||||| ||||    
T  36409512 cgacaccgacacctataattacactaaattatgtgactttttcaatt 36409558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 36423678 - 36423724
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaatt 370  Q
    |||||||||||| ||||||||||||||||||||||| ||||| ||||    
T  36423678 cgacaccgacacctataattacactaaattatgtgactttttcaatt 36423724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 370
Target Start/End: Original strand, 5555133 - 5555178
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaatt 370  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||    
T  5555133 gacaccgacacatataattacattaaattatcttattttttaaatt 5555178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 405
Target Start/End: Original strand, 12797338 - 12797418
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgt 405  Q
    |||||||||||| | |||||||||| ||||||||||||||| ||||| | ||| | || |||||||| ||||||| ||||||    
T  12797338 cgacaccgacacttgtaattacactgaattatgtgatttttcaaattat-tagttttgccggcgtgtcagtgtccgtgtcgt 12797418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 397
Target Start/End: Complemental strand, 15029824 - 15029751
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    ||||||| ||||||||||||||||| ||||||||||| |||| || ||  |||| ||||| |||||| ||||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtc 15029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 355
Target Start/End: Complemental strand, 30838331 - 30838238
Alignment:
Q  262 acggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattat 355  Q
    ||||||||||||||| | | |||||||   ||||  ||||||||| | ||||| ||  ||||||||||||| || |||||||||||||||||||    
T  30838331 acggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacacgacaccgatacttataattacactaaattat 30838238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 40179636 - 40179677
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  40179636 cgacaccgacgcatataattacactgaattatgtgatttttt 40179677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 54580023 - 54580064
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||||| |||||||||||| ||||||||||||||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgatttttt 54580064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 428
Target Start/End: Complemental strand, 36635375 - 36635279
Alignment:
Q  332 acacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    ||||||||||||||||| |||||||||||||| | || ||  |||  |||| ||||||| |||||||  ||||||| || |||| |||||| |||||    
T  36635375 acacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgtgtccttatcc 36635279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 40742655 - 40742611
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||| |||||||||||||||||||| ||||| |||||||    
T  40742655 cgacacgacatcgacacatataattacactagattatatgatttt 40742611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 368
Target Start/End: Original strand, 44132612 - 44132688
Alignment:
Q  292 gtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaa 368  Q
    |||| |||||| ||| |||| || || | |||||||||||||||||||||||| ||| ||||| |||||||| ||||    
T  44132612 gtgtcagacacatgttgtgttcgacaccaacacgacaccgacacatataattatactgaattacgtgattttctaaa 44132688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 46160960 - 46160916
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||||||||||||||| ||||| |||||||| |||||    
T  46160960 cgacacgacaccgacacatataataacactgaattatgttatttt 46160916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 386
Target Start/End: Original strand, 3947761 - 3947828
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggc 386  Q
    ||||||||||| ||||| | |||||||||| ||||||| |||||||| || ||  |||||||||||||    
T  3947761 cgacacgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcggc 3947828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 6485613 - 6485652
Alignment:
Q  326 acaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgatttttt 6485652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 390
Target Start/End: Original strand, 12895111 - 12895182
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||||||||||||| | |||||||  | |||||||||||||||| || ||  ||||||| |||||||||    
T  12895111 cgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgt 12895182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 363
Target Start/End: Complemental strand, 17344555 - 17344520
Alignment:
Q  328 accgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||||||| ||||||||||||||||    
T  17344555 accgacacatataattacattaaattatgtgatttt 17344520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 428
Target Start/End: Complemental strand, 848072 - 847906
Alignment:
Q  262 acggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatt 361  Q
    |||||||||||| |||| | | ||||| | ||||| ||||||| | ||||||| || | ||| ||||||||||| | |||||| | | |||||||| |||    
T  848072 acggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaattatgtaatt 847973  T
Q  362 ttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatcc 428  Q
    || | || ||  |||| |  ||||||||| ||||||  |||||||| ||  |||| |||||||||||    
T  847972 ttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtccatgtccgtatcc 847906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 361
Target Start/End: Complemental strand, 4100027 - 4099983
Alignment:
Q  320 gacacgacaccgacacatata---attacactaaattatgtgatt 361  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  4100027 gacacgacaccgacacatataattattacactaaattatgtgatt 4099983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 4157208 - 4157162
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaatt 370  Q
    |||||||||||| | ||||| |||||||||||||||||||| |||||    
T  4157208 cgacaccgacacttgtaattgcactaaattatgtgatttttcaaatt 4157162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 7214523 - 7214561
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  7214523 gacaccgacgcatataattacattaaattatgtgatttt 7214561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 428
Target Start/End: Complemental strand, 13783342 - 13783236
Alignment:
Q  322 cacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtc 421  Q
    |||||||||| |||||||||||||||| |||| |||||| || | || |   |||| ||||||| |||| ||||||| |||| | |  ||||||||||||    
T  13783342 cacgacaccggcacatataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgtgtcatttgagatgtccgtgtc 13783243  T
Q  422 cgtatcc 428  Q
     ||||||    
T  13783242 tgtatcc 13783236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 407
Target Start/End: Original strand, 16303263 - 16303349
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||||||||||||| | ||||||||||||||||| | ||||||| ||  |  || || ||||||||||| ||||||| | ||||||    
T  16303263 acacgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtccgtatcgtgt 16303349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 363
Target Start/End: Original strand, 24613634 - 24613740
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| |||||||||||| |||| |  ||||||   |||| |||||||||| ||||| | || ||||| ||||||||||| | || ||||| | |||||||    
T  24613634 gaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaattatg 24613733  T
Q  357 tgatttt 363  Q
    |||||||    
T  24613734 tgatttt 24613740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 33950194 - 33950156
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  33950194 gacaccgacacatatgattacattaaattatgtgatttt 33950156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 40613504 - 40613470
Alignment:
Q  329 ccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||||||||||| ||||||||||||||    
T  40613504 ccgacacatataattacactgaattatgtgatttt 40613470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 11596348 - 11596393
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||| |||| | |||||||||| ||||||||||||||||    
T  11596348 gacacgacacctacacttgtaattacactgaattatgtgatttttt 11596393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 397
Target Start/End: Original strand, 34306804 - 34306876
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    |||||||||||| | ||||||||||| ||||| |||||||| ||||| | ||| ||||||||||| | ||||||    
T  34306804 cgacaccgacacttgtaattacactacattatctgatttttcaaattat-tagttgtgtcggcgtatcagtgtc 34306876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 407
Target Start/End: Original strand, 35723383 - 35723467
Alignment:
Q  323 acgacaccgacacatataattacactaaattatgtg-attttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||||| |||||||||||||||| | ||||||||| ||||| | || ||  |||| |||||||||||| ||||| ||||||||||    
T  35723383 acgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgt-catgtcgtgt 35723467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 36509092 - 36509133
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||| ||||||||||||||||||||  |||||||||||||||    
T  36509092 cgacgccgacacatataattacacttgattatgtgatttttt 36509133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 42640588 - 42640547
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||||| | |||||||||| ||||||||||||||||    
T  42640588 cgacaccgacacttgtaattacactgaattatgtgatttttt 42640547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 999354 - 999386
Alignment:
Q  330 cgacacatataattacactaaattatgtgattt 362  Q
    |||||||||||||||||||||||||| ||||||    
T  999354 cgacacatataattacactaaattatatgattt 999386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 1213227 - 1213267
Alignment:
Q  330 cgacacatataattacactaaattatgtgattttttaaatt 370  Q
    ||||||||||||||||||| |||||| | ||||||||||||    
T  1213227 cgacacatataattacactgaattatataattttttaaatt 1213267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 4157495 - 4157455
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttt 364  Q
    |||||||||||| | ||||| ||||||||||||||||||||    
T  4157495 cgacaccgacacttgtaattgcactaaattatgtgattttt 4157455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 6879465 - 6879505
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttt 364  Q
    |||||||||||| | |||||||||| |||||||||||||||    
T  6879465 cgacaccgacacttgtaattacacttaattatgtgattttt 6879505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 407
Target Start/End: Original strand, 14126118 - 14126194
Alignment:
Q  331 gacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||| |||||||||||| |||||||||| ||| | || ||  || | |||||||||||||||||||  ||||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgt 14126194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 15659755 - 15659799
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||||| ||||||||||||||||  ||||||| ||||||    
T  15659755 cgacacgacaccaacacatataattacaccgaattatgagatttt 15659799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 16189765 - 16189729
Alignment:
Q  327 caccgacacatataattacactaaattatgtgatttt 363  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  16189765 caccgacacacataattacactgaattatgtgatttt 16189729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 18576032 - 18576076
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||| |||||| ||||||||||||||||  ||||||||||||||    
T  18576032 cgacatgacaccaacacatataattacaccgaattatgtgatttt 18576076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 407
Target Start/End: Complemental strand, 40481680 - 40481613
Alignment:
Q  339 taattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||||||| ||||||||||||||| ||||| | ||| ||| ||||||||| ||||||  ||||||||    
T  40481680 taattacactgaattatgtgatttttcaaattat-tagttgtatcggcgtgtcagtgtcagtgtcgtgt 40481613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 46741 - 46637
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||  | |||||||||| |||||||||||||||| || ||  || |||||||||||||| | ||||| |||||||| |||||||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccg 46642  T
Q  424 tatcc 428  Q
    |||||    
T  46641 tatcc 46637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 5934 - 6040
Alignment:
Q  262 acggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatt 361  Q
    |||||||||||| |||||| ||||||| | |||| |||||||||| |||| || || ||| ||||||||||||||||||||||||||  ||| |||||||    
T  5934 acggacactccttggataaggcgtgtctctgtgtcagacacgtgtcgtgttcgacaccgatacgacaccgacacatataattacactgcattttgtgatt 6033  T
Q  362 ttttaaa 368  Q
    || ||||    
T  6034 ttctaaa 6040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 428
Target Start/End: Complemental strand, 9962 - 9853
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    |||| |||||||||||||||||||||||||  ||| | ||||||| ||||     |||||||||||||||||  ||||||||||||||| || |||||||    
T  9962 cgacgcgacaccgacacatataattacactgcattttatgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccatgtcgtgtccggtgtccgt 9863  T
Q  419 gtccgtatcc 428  Q
    ||||||||||    
T  9862 gtccgtatcc 9853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 462 - 566
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||||| | |||||||||| |||| ||||||||||| || ||  |||| |||||||||| | ||||||| || |||||||| ||||||||||||    
T  462 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgtgtccg 561  T
Q  424 tatcc 428  Q
    |||||    
T  562 tatcc 566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 319 - 418
Target Start/End: Complemental strand, 20236 - 20137
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    ||||||||||| ||||| | |||||||||| |||||||||||||||| || ||  ||||||||||||||||| | ||||| |||||||| || |||||||    
T  20236 cgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 20137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 319 - 424
Target Start/End: Complemental strand, 23484 - 23380
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||  | ||  || |||||||||||||| ||||||  |||||||| || |||||||    
T  23484 cgacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccg-tgtccgt 23386  T
Q  419 gtccgt 424  Q
     |||||    
T  23385 atccgt 23380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 365
Target Start/End: Complemental strand, 23586 - 23529
Alignment:
Q  308 gtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||| || ||| ||||||| ||||| |||||||||||| ||||||||||||||||    
T  23586 gtgtccgacaccgaaacgacactgacacttataattacactgaattatgtgatttttt 23529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 363
Target Start/End: Original strand, 9680 - 9786
Alignment:
Q  257 gaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatg 356  Q
    |||| ||||||||||||||||| |  |||||| |  ||| ||||| |||| ||||| | || | |||||||||||||||||||||||||||| ||||| |    
T  9680 gaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaattaag 9779  T
Q  357 tgatttt 363  Q
    |||||||    
T  9780 tgatttt 9786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 418
Target Start/End: Original strand, 135308 - 135406
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    ||||||||||||||||||||||||||||  |||||||||||||| | || ||  |||| ||||||| ||||| |||||  |||||| |||| |||||||    
T  135308 gacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgtctgtgtcgtattcggtgtccgt 135406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 363
Target Start/End: Original strand, 44499 - 44564
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||| ||||||  || |||||||| ||||||||||||||||||||| ||||||||||||||    
T  44499 gacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtgatttt 44564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 363
Target Start/End: Complemental strand, 53301 - 53200
Alignment:
Q  262 acggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatt 361  Q
    ||||||||| || |||| || |||||| | ||||  |||||||||  |||||| || ||||||| ||||||||| |||||||||||| ||||||||||||    
T  53301 acggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgatt 53202  T
Q  362 tt 363  Q
    ||    
T  53201 tt 53200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 428
Target Start/End: Complemental strand, 130538 - 130437
Alignment:
Q  327 caccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtat 426  Q
    ||||||||| | |||||||||| |||||||||||||||| ||  |  || |||||||||| ||| | ||||| |||||||| || |||||||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgtat 130439  T
Q  427 cc 428  Q
    ||    
T  130438 cc 130437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 397
Target Start/End: Complemental strand, 71843 - 71709
Alignment:
Q  265 gacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttt 364  Q
    |||||||||||||| |  |||||| | ||||  ||||||||| ||||||| || ||||||||||| |||||   |||||||||| |||| ||||||||||    
T  71843 gacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaattgtgtgattttt 71744  T
Q  365 t---aaattttgtagctgtgtcggcgtgttagtgtc 397  Q
    |   ||||| | ||||||||||||||||| ||||||    
T  71743 tttcaaattat-tagctgtgtcggcgtgtcagtgtc 71709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 363
Target Start/End: Original strand, 25765 - 25807
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  25765 acacgacaccgacacttataattacactaaattatgtgatttt 25807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 365
Target Start/End: Original strand, 3789 - 3890
Alignment:
Q  264 ggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttt 363  Q
    ||||||||||||||| | ||||||| |  |||  |||| |||| ||||||| || | ||||||||| ||||| | |||||||||| ||||||||||||||    
T  3789 ggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgatttt 3888  T
Q  364 tt 365  Q
    ||    
T  3889 tt 3890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 398
Target Start/End: Original strand, 17750 - 17823
Alignment:
Q  325 gacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtcc 398  Q
    ||||||||||| | ||||||||||||||||||||||||||| || ||  ||| |||||| |||||||| |||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgtgttattgtcc 17823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 427
Target Start/End: Original strand, 263310 - 263475
Alignment:
Q  262 acggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatt 361  Q
    ||||||||||||||||| | |||||||   || |   |||||||| ||||| | || ||||||||||| ||||| |||||||||||| ||||||||| ||    
T  263310 acggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggtt 263409  T
Q  362 ttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccgtatc 427  Q
    || | || ||  |||| |||| | | ||| ||||||| |||||| | |  ||||||||||||||||    
T  263410 ttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgtatccagtgtccgtgtccgtatc 263475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 403
Target Start/End: Complemental strand, 51855 - 51791
Alignment:
Q  339 taattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtc 403  Q
    |||||||||| |||||||||||||||| || ||  ||||||||||||||||| ||||||| ||||    
T  51855 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 51791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 84947 - 85039
Alignment:
Q  298 gacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    ||||||||| |||| || |||||||| |||||||||| ||||||||||||  |||||| ||||||| | || || ||||  ||||||||||||    
T  84947 gacacgtgttgtgttcgacatcgacatgacaccgacatatataattacacataattatatgattttcttaaattagtagtggtgtcggcgtgt 85039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 262 - 365
Target Start/End: Complemental strand, 3049 - 2946
Alignment:
Q  262 acggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatt 361  Q
    ||||||||||||||||| | ||||||  | ||||   |||||||| ||||| |  | ||||||||||| || || | |||||||||||||||||||||||    
T  3049 acggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaattatgtgatt 2950  T
Q  362 tttt 365  Q
    ||||    
T  2949 tttt 2946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 24108 - 24018
Alignment:
Q  299 acacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||||||| ||||||| || ||||||||||| || || | |||||||||||||||||| ||||||| ||| ||  |||||||||||| ||||    
T  24108 acacgtgttgtgtccgacaccgacacgacactgaaac-tgtaattacactaaattatgagatttttgaaaattattagctgtgtcggtgtgt 24018  T

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Target: scaffold0126 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 320 - 421
Target Start/End: Complemental strand, 19207 - 19107
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtg 419  Q
    |||||||||||||||  | |||| ||||| |||||||| |||||||||||| | || |  ||||||||||||||||||| |||| | |  ||||||||||    
T  19207 gacacgacaccgacatttttaatcacactgaattatgtcattttttaaattat-taaccatgtcggcgtgttagtgtccgtgtcatatctgatgtccgtg 19109  T
Q  420 tc 421  Q
    ||    
T  19108 tc 19107  T

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Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 320 - 396
Target Start/End: Complemental strand, 28913 - 28837
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgatttt-ttaaattttgtagctgtgtcggcgtgttagtgt 396  Q
    ||||| ||||||||||||||||||||| | ||||||| |||||| ||||||| | || | ||||||||||||||||||    
T  28913 gacacaacaccgacacatataattacattgaattatgcgattttcttaaattat-taacggtgtcggcgtgttagtgt 28837  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 407
Target Start/End: Original strand, 178813 - 178902
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatg-tgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    ||||| ||||| ||||| | |||||||||| ||||||| ||||||||| || ||  ||| ||||||||||||| ||||||| ||||||||    
T  178813 cgacatgacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgt 178902  T

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Target: scaffold1300 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 665 - 593
Alignment:
Q  293 tgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||| || |||| || ||  |||||||||| |||| ||||||||||||  ||||||||||||||||    
T  665 tgttagacacgcgttgtgttcgacactgacacgacactgacatatataattacacataattatgtgatttttt 593  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 23832 - 23788
Alignment:
Q  321 acacgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    ||||||||||||||| | |||||||||| ||||||||||||||||    
T  23832 acacgacaccgacacttgtaattacactgaattatgtgatttttt 23788  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 421
Target Start/End: Original strand, 225274 - 225365
Alignment:
Q  330 cgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtc 421  Q
    |||||| |||||||||| |  ||||||| ||||| | || ||  || |||||||||||||| ||||||| |||||||| || ||||||||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtc 225365  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 390
Target Start/End: Original strand, 7319 - 7377
Alignment:
Q  332 acacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgt 390  Q
    |||| ||||||||||||||||||||||||||||  || ||  ||| |||||||||||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgt 7377  T

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Target: scaffold0450 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 396
Target Start/End: Original strand, 8562 - 8707
Alignment:
Q  251 atctacgaagtacggacactcctcggataaagcgtgtcaccgtgttagacacgtgtggtgtccggcatcgacacgacaccgacacatataattacactaa 350  Q
    ||||| |||| |||||||||||||| || | ||||||  | ||||  ||||||| | |||||||  | ||||||||||||||||  | |||||| ||  |    
T  8562 atctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacgacaccgacatttgtaattataccga 8661  T
Q  351 attatgtgattttttaaattttgtagctgtgtcggcgtgttagtgt 396  Q
    |||||||||| |||| || ||  ||| ||||||||| ||| |||||    
T  8662 attatgtgatattttcaaattattagttgtgtcggcatgtcagtgt 8707  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 70337 - 70296
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgatttttt 365  Q
    |||||||||||| |||||||||||| |||||||| |||||||    
T  70337 cgacaccgacacttataattacactgaattatgttatttttt 70296  T

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Target: scaffold0306 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 424
Target Start/End: Complemental strand, 13459 - 13359
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||| | | ||||| |||| |||||||||||||| | || ||  ||| ||||||||||||| ||||||| |||| | | || ||||||| ||||    
T  13459 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccg 13360  T
Q  424 t 424  Q
    |    
T  13359 t 13359  T

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Target: scaffold0246 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 407
Target Start/End: Complemental strand, 19619 - 19552
Alignment:
Q  339 taattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgt 407  Q
    |||||||||| ||||||||||||||| ||||| | ||| ||| ||||||||| ||||||  ||||||||    
T  19619 taattacactgaattatgtgatttttcaaattat-tagttgtatcggcgtgtcagtgtcagtgtcgtgt 19552  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 21107 - 20999
Alignment:
Q  319 cgacacgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgt 418  Q
    |||||||| ||||||||||||||||| ||  | |||||||||||| | || ||  || | ||||| || ||| ||||||| ||||||||  | |||||||    
T  21107 cgacacgataccgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtccgt 21008  T
Q  419 gtccgtatc 427  Q
    || ||||||    
T  21007 gttcgtatc 20999  T

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Target: scaffold0152 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 424
Target Start/End: Original strand, 21868 - 21968
Alignment:
Q  324 cgacaccgacacatataattacactaaattatgtgattttttaaattttgtagctgtgtcggcgtgttagtgtccatgtcgtgttcgatgtccgtgtccg 423  Q
    |||||||||| | | ||||| |||| |||||||||||||| | || ||  ||| ||||||||||||| ||||||| |||| | | || ||||||| ||||    
T  21868 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccg 21967  T
Q  424 t 424  Q
    |    
T  21968 t 21968  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 368
Target Start/End: Complemental strand, 99956 - 99908
Alignment:
Q  320 gacacgacaccgacacatataattacactaaattatgtgattttttaaa 368  Q
    ||||||||||| ||||||||||||||| | |||||||| ||||| ||||    
T  99956 gacacgacaccaacacatataattacattgaattatgttattttctaaa 99908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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