View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_245 (Length: 268)
Name: NF7850A_low_245
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_245 |
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Alignment Details
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 15 - 253
Target Start/End: Complemental strand, 23767018 - 23766780
Alignment:
| Q |
15 |
gacacatatagacgtataatcaaatatgatcaagtagacataaacatgatatcagatacactaatatacttaattatgcatgctcatcata------ttc |
108 |
Q |
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| T |
23767018 |
gacacatatagacgtatggtcaaatatgatcaaatagacataaacatgatatcagatacactaatatacttaattatgcatgctcatcataaagtagttc |
23766919 |
T |
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| Q |
109 |
acatagtcataaactagtaataacacaaattgattcatattcatattcacatttaattaatattttcacaagtattgcaattgaatgattctaatactgc |
208 |
Q |
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| T |
23766918 |
acatagtcataaactagtaataacacaaattgattcatattca------catttaattaatattttcacaagtattgcaattgaatgattctaatactgc |
23766825 |
T |
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| Q |
209 |
aaacacatgacatgcaatgcaaaccttcatatgccacttcttatg |
253 |
Q |
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| T |
23766824 |
aaacacatgacatgcaatgcaaaccttcatatgccacttcttatg |
23766780 |
T |
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