View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_249 (Length: 267)
Name: NF7850A_low_249
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_249 |
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Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 42944579 - 42944836
Alignment:
| Q |
1 |
aattaagcgagcatcgtatgatgtaaatcaactgatatagatttggttagttagttagttacatctgagcagttaattctattatttctattactaagga |
100 |
Q |
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||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42944579 |
aattaagcgagcatcttgtgatgtaaatcaactgatatagatttggtta----gttagttacatctgagcagttaattctattatttctattactaagga |
42944674 |
T |
|
| Q |
101 |
gttatcatgtgatcacttgtataagtacaatttacattgataatgaacaacaaatttcattgagagaaatttttcatctcaaagtaactctcttctatac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
42944675 |
gttatcatgtgatcacttgtataagtacaatttacattgataatgaacaacaaatttcattgagagaaatttttcatctcaaaataactctcttctatac |
42944774 |
T |
|
| Q |
201 |
tttctgattcatattgtgtatgtaattgagtgtggtttcttaatttcaaacccaacaccaaa |
262 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42944775 |
tttctgtttcatattgtgtatgtaattgagtgtggtttcttaatttcaaacccaacaccaaa |
42944836 |
T |
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