View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_258 (Length: 265)
Name: NF7850A_low_258
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_258 |
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Alignment Details
Target: chr1 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 12638735 - 12638478
Alignment:
| Q |
1 |
atatgagcacggtcctcgagttcagctactgttgctaaccattgtttaaaattatcattatcgattaatagcactataatacacttatacacgttactag |
100 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12638735 |
atatgagcacggtcctcgagttcagctactgttgctgaccattgttcaaaactatcattatcgattaatagcactataatacacttatacacgttactag |
12638636 |
T |
|
| Q |
101 |
tttgttttatcaccaaatcattcacctatagcttaaaaattgctgatagctactagcactaaactacacatttctagttggtttaacctccatggattcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12638635 |
tttgttttatcaccaaatcattcacctatagcttaaaaattgctgatagctactagcactaaactacacatttctagttggtttaacctccatggattcc |
12638536 |
T |
|
| Q |
201 |
ccaattttttacttactagcccttgtcttctttttcatcttcatgcttgtggtactta |
258 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
12638535 |
ccaattttttacttactagcccttgtcttgtttttcatcttcatgcttgtggtactta |
12638478 |
T |
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