View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_280 (Length: 257)
Name: NF7850A_low_280
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_280 |
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Alignment Details
Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 4 - 252
Target Start/End: Original strand, 52763369 - 52763617
Alignment:
| Q |
4 |
attaaaaaagggtagttggtaatggactcaaaacatttgtatgaacaaatcctttattagttagtattcctcttagagataggtttaagcagttgtttga |
103 |
Q |
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| T |
52763369 |
attaaaaaagggtagttggtaatggactcaaatcatctgtatgaacaaatcctttattaggtagtattcctcttagagataggtttaagcagttgtttga |
52763468 |
T |
|
| Q |
104 |
gttggctgaaaatcgttggattttggcggcggagatgttttctttannnnnnnnnnnnnnnnnnnnnnnnntatgaaggcataaaagtggcggtggaggc |
203 |
Q |
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| T |
52763469 |
attggctgaaaatcgttggattttagcggcggagatgttttatttagggtgggtgggggtgggggtggggttatgaaggcataaaagtggcggtggaggc |
52763568 |
T |
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| Q |
204 |
tgttactttgcatgttgatattgaagaccattgacgatgacaactagat |
252 |
Q |
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| T |
52763569 |
tgttactttgcatgttgatattgaagaccattgacgatgacaactagat |
52763617 |
T |
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