View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_283 (Length: 255)
Name: NF7850A_low_283
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_283 |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 33710462 - 33710686
Alignment:
| Q |
11 |
caaagaaactataccaactaccaaactcaatgcagaaccaattaacacaaacagaattcccattgcacaagttaacaatggactcaaccaaaatgctgcc |
110 |
Q |
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| T |
33710462 |
caaagaaactataccaactaccaaactcaatgcagaaccaattaacacaaacagaattcccattgcacacgttaacaatggactcaaccaaaatgctgcc |
33710561 |
T |
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| Q |
111 |
ctgagcgccttttccgggtggcttgcaatgatccattgccacatcaaaccaagaattcctccacatactgttgatgctagaagtggagggtaccatttct |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33710562 |
ctgagcgccttttccgggtggcttgcaatgatccattgccacatcaaaccaagaattcctccacatactgttgatgctagaagtggagggtaccatttct |
33710661 |
T |
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| Q |
211 |
cagggtggaaatggtgggttgaata |
235 |
Q |
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||||||||||||||||||||||||| |
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| T |
33710662 |
cagggtggaaatggtgggttgaata |
33710686 |
T |
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