View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_286 (Length: 254)
Name: NF7850A_low_286
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_286 |
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Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 22 - 241
Target Start/End: Original strand, 10761283 - 10761502
Alignment:
| Q |
22 |
gaaacatgttatttggcactattcaaagccgagagacaataatgtggctgaaataagaacatcgtgttatagttttgggccttcaggcctaaaggaagtg |
121 |
Q |
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| T |
10761283 |
gaaacatgttatttggcactattcaaagtcgagagacaataatgtggctgaaataagaacatcgtgttatagttttgggccttcaggcctaaaggaagtg |
10761382 |
T |
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| Q |
122 |
ccacgtgaaggagtcatgatggggtacacgtgtcgtttggcagaacgcgagagacataagagtattgtgagacctgatgcacttaatcaaacactcatta |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10761383 |
ccacgtgaaggagtcatgatggggtacacgtgtcgtttggcagaacgcgagagacataagagtattgtgagacctgatgcacttaatcaaacactcatta |
10761482 |
T |
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| Q |
222 |
atgtggtacaccactttcat |
241 |
Q |
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|||||||||||||||||||| |
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| T |
10761483 |
atgtggtacaccactttcat |
10761502 |
T |
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