View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7850A_low_3 (Length: 661)

Name: NF7850A_low_3
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7850A_low_3
NF7850A_low_3
[»] chr8 (42 HSPs)
chr8 (13-393)||(154401-154782)
chr8 (319-392)||(44103877-44103951)
chr8 (321-392)||(21273598-21273669)
chr8 (319-393)||(23258143-23258217)
chr8 (327-384)||(12668751-12668808)
chr8 (457-503)||(5742683-5742728)
chr8 (320-385)||(3989024-3989089)
chr8 (320-392)||(30925541-30925613)
chr8 (87-132)||(32236991-32237036)
chr8 (321-393)||(2768275-2768347)
chr8 (361-393)||(35594655-35594687)
chr8 (462-505)||(10644833-10644875)
chr8 (328-390)||(20284821-20284884)
chr8 (328-390)||(21071450-21071513)
chr8 (321-391)||(45101509-45101579)
chr8 (322-392)||(21418481-21418551)
chr8 (457-503)||(21649194-21649239)
chr8 (457-503)||(27300346-27300391)
chr8 (457-503)||(28156203-28156248)
chr8 (457-503)||(32674258-32674303)
chr8 (457-503)||(35701853-35701898)
chr8 (457-503)||(35937538-35937583)
chr8 (322-392)||(40102135-40102205)
chr8 (457-503)||(41273515-41273560)
chr8 (319-393)||(41344555-41344629)
chr8 (320-393)||(43605555-43605629)
chr8 (321-393)||(11139007-11139080)
chr8 (458-503)||(22203242-22203286)
chr8 (458-503)||(37784401-37784445)
chr8 (320-385)||(40413250-40413315)
chr8 (320-369)||(43403919-43403968)
chr8 (463-503)||(1248253-1248292)
chr8 (321-392)||(14029130-14029202)
chr8 (459-503)||(20288533-20288576)
chr8 (459-503)||(21075162-21075205)
chr8 (325-393)||(24503028-24503096)
chr8 (326-393)||(30129520-30129588)
chr8 (319-386)||(34474069-34474136)
chr8 (457-505)||(37568640-37568687)
chr8 (325-393)||(38128418-38128486)
chr8 (320-391)||(42543367-42543439)
chr8 (464-504)||(43602456-43602495)
[»] chr2 (40 HSPs)
chr2 (541-649)||(6295433-6295541)
chr2 (87-203)||(14902304-14902419)
chr2 (312-393)||(22390263-22390344)
chr2 (319-392)||(36133086-36133159)
chr2 (322-393)||(10749568-10749639)
chr2 (319-393)||(43791676-43791751)
chr2 (319-393)||(3091852-3091926)
chr2 (319-393)||(23045272-23045346)
chr2 (319-393)||(32750109-32750183)
chr2 (322-383)||(2308213-2308274)
chr2 (320-393)||(13104590-13104663)
chr2 (319-392)||(13711173-13711246)
chr2 (321-393)||(2013173-2013245)
chr2 (321-392)||(19913896-19913968)
chr2 (321-392)||(11164264-11164335)
chr2 (322-393)||(11229210-11229281)
chr2 (325-392)||(12600160-12600227)
chr2 (322-393)||(14140228-14140299)
chr2 (326-392)||(15019036-15019103)
chr2 (322-393)||(19695581-19695651)
chr2 (358-393)||(25994212-25994247)
chr2 (358-393)||(25997655-25997690)
chr2 (319-393)||(44189938-44190010)
chr2 (457-503)||(5852474-5852519)
chr2 (457-503)||(11728147-11728192)
chr2 (457-503)||(30339993-30340038)
chr2 (457-503)||(30487495-30487540)
chr2 (320-393)||(34249691-34249765)
chr2 (457-503)||(36383462-36383507)
chr2 (457-503)||(36909869-36909914)
chr2 (457-503)||(40721771-40721816)
chr2 (312-390)||(42283129-42283207)
chr2 (457-503)||(44484682-44484727)
chr2 (317-393)||(36816300-36816376)
chr2 (316-393)||(43725316-43725393)
chr2 (463-503)||(5031923-5031962)
chr2 (321-393)||(7086012-7086084)
chr2 (322-390)||(14714100-14714168)
chr2 (319-371)||(27490752-27490804)
chr2 (321-393)||(42665700-42665772)
[»] chr1 (42 HSPs)
chr1 (80-203)||(42312847-42312970)
chr1 (322-393)||(18610881-18610952)
chr1 (320-393)||(41558104-41558177)
chr1 (322-393)||(6841902-6841973)
chr1 (322-392)||(37516024-37516093)
chr1 (320-393)||(30530286-30530359)
chr1 (88-144)||(5450671-5450727)
chr1 (321-393)||(8464401-8464473)
chr1 (320-391)||(15061958-15062030)
chr1 (321-393)||(39010925-39010997)
chr1 (318-393)||(366768-366843)
chr1 (322-393)||(40610340-40610411)
chr1 (319-392)||(49453592-49453662)
chr1 (320-393)||(8934421-8934494)
chr1 (321-393)||(51571539-51571609)
chr1 (321-393)||(30631733-30631805)
chr1 (321-369)||(46948114-46948162)
chr1 (320-363)||(28716284-28716327)
chr1 (457-504)||(35972830-35972876)
chr1 (319-370)||(43755572-43755623)
chr1 (457-500)||(48336464-48336506)
chr1 (319-385)||(1615156-1615222)
chr1 (457-503)||(6396327-6396372)
chr1 (457-503)||(12999848-12999893)
chr1 (319-393)||(22389412-22389485)
chr1 (322-392)||(31290097-31290167)
chr1 (319-393)||(36930642-36930716)
chr1 (457-503)||(41564906-41564951)
chr1 (457-503)||(42256460-42256505)
chr1 (319-393)||(50017309-50017383)
chr1 (319-392)||(5315323-5315396)
chr1 (319-384)||(17390757-17390822)
chr1 (462-503)||(21433432-21433472)
chr1 (458-503)||(23400016-23400060)
chr1 (320-393)||(34187375-34187448)
chr1 (322-382)||(36690461-36690519)
chr1 (322-382)||(36706562-36706620)
chr1 (319-391)||(48872837-48872909)
chr1 (323-392)||(51703002-51703070)
chr1 (325-392)||(25302536-25302604)
chr1 (328-392)||(32821747-32821811)
chr1 (457-501)||(50035563-50035606)
[»] chr4 (55 HSPs)
chr4 (320-393)||(11063976-11064049)
chr4 (88-178)||(41668893-41668983)
chr4 (322-393)||(5234360-5234431)
chr4 (87-207)||(7372583-7372702)
chr4 (322-393)||(16004216-16004286)
chr4 (322-392)||(28480427-28480497)
chr4 (322-392)||(28481301-28481371)
chr4 (322-392)||(28482176-28482246)
chr4 (319-392)||(42915105-42915178)
chr4 (321-393)||(31275257-31275329)
chr4 (321-393)||(32713957-32714029)
chr4 (320-386)||(1033266-1033332)
chr4 (322-391)||(1580171-1580241)
chr4 (323-393)||(5123480-5123550)
chr4 (320-393)||(24772782-24772855)
chr4 (320-392)||(31240760-31240833)
chr4 (458-503)||(35037609-35037653)
chr4 (321-393)||(39684736-39684808)
chr4 (71-207)||(40303498-40303631)
chr4 (321-385)||(51389435-51389499)
chr4 (318-393)||(55927095-55927170)
chr4 (362-393)||(2812522-2812553)
chr4 (322-369)||(15596531-15596578)
chr4 (322-393)||(35580221-35580292)
chr4 (326-393)||(39844151-39844218)
chr4 (457-503)||(3475869-3475914)
chr4 (457-503)||(5208353-5208398)
chr4 (320-393)||(6126964-6127038)
chr4 (319-393)||(19245999-19246073)
chr4 (457-503)||(26442416-26442461)
chr4 (323-393)||(29384087-29384157)
chr4 (457-503)||(29863551-29863596)
chr4 (457-503)||(31318753-31318798)
chr4 (319-393)||(31658030-31658104)
chr4 (319-392)||(36792444-36792518)
chr4 (319-392)||(39241188-39241262)
chr4 (319-393)||(47998705-47998778)
chr4 (319-393)||(51717170-51717244)
chr4 (457-503)||(55268027-55268072)
chr4 (458-503)||(1796366-1796410)
chr4 (320-393)||(4896387-4896460)
chr4 (458-503)||(7037511-7037555)
chr4 (320-393)||(25523083-25523156)
chr4 (328-393)||(33438156-33438221)
chr4 (320-393)||(36444282-36444355)
chr4 (462-503)||(51359821-51359861)
chr4 (464-504)||(169535-169574)
chr4 (463-503)||(8810571-8810610)
chr4 (325-393)||(17363341-17363409)
chr4 (321-392)||(22257084-22257155)
chr4 (317-392)||(36728505-36728581)
chr4 (361-393)||(40308544-40308576)
chr4 (457-501)||(43307395-43307438)
chr4 (321-392)||(48099922-48099993)
chr4 (351-390)||(51397775-51397815)
[»] chr5 (41 HSPs)
chr5 (322-392)||(24431507-24431577)
chr5 (320-393)||(20719902-20719975)
chr5 (322-393)||(3722965-3723036)
chr5 (322-393)||(39595385-39595456)
chr5 (323-393)||(125203-125273)
chr5 (319-393)||(33567125-33567199)
chr5 (319-392)||(2117526-2117599)
chr5 (319-392)||(33243627-33243700)
chr5 (321-393)||(40566104-40566177)
chr5 (464-504)||(7077375-7077414)
chr5 (322-386)||(9714024-9714088)
chr5 (320-392)||(11767877-11767949)
chr5 (321-393)||(19376020-19376092)
chr5 (321-393)||(27392590-27392662)
chr5 (322-392)||(3141608-3141678)
chr5 (322-393)||(3155113-3155184)
chr5 (457-500)||(5005105-5005148)
chr5 (319-393)||(8959271-8959346)
chr5 (321-392)||(11306808-11306879)
chr5 (457-503)||(1107981-1108026)
chr5 (457-503)||(3031834-3031879)
chr5 (319-369)||(9403648-9403698)
chr5 (457-503)||(9594478-9594523)
chr5 (457-503)||(9599754-9599799)
chr5 (457-503)||(14914372-14914417)
chr5 (457-503)||(18729315-18729360)
chr5 (319-369)||(19127259-19127309)
chr5 (457-503)||(28501592-28501637)
chr5 (319-393)||(29402293-29402367)
chr5 (457-503)||(29765830-29765875)
chr5 (457-503)||(30574403-30574448)
chr5 (457-503)||(39032630-39032675)
chr5 (458-503)||(3263535-3263579)
chr5 (328-393)||(7144686-7144751)
chr5 (320-393)||(18638728-18638801)
chr5 (462-503)||(18695318-18695358)
chr5 (458-503)||(25585483-25585527)
chr5 (318-393)||(17489459-17489535)
chr5 (361-393)||(27340980-27341012)
chr5 (463-503)||(42225798-42225837)
chr5 (361-393)||(42807419-42807451)
[»] chr3 (45 HSPs)
chr3 (80-207)||(43790588-43790717)
chr3 (322-393)||(28300535-28300606)
chr3 (89-178)||(9107100-9107190)
chr3 (320-393)||(20380776-20380849)
chr3 (321-393)||(7231894-7231966)
chr3 (318-393)||(22153975-22154050)
chr3 (319-393)||(25959428-25959502)
chr3 (319-389)||(31997917-31997988)
chr3 (322-393)||(42475866-42475937)
chr3 (319-393)||(11173561-11173635)
chr3 (457-503)||(11327108-11327153)
chr3 (323-393)||(26668951-26669021)
chr3 (322-392)||(29706015-29706085)
chr3 (328-393)||(32795947-32796012)
chr3 (457-503)||(54233494-54233539)
chr3 (321-392)||(43169642-43169712)
chr3 (320-393)||(46473239-46473312)
chr3 (322-393)||(35272138-35272210)
chr3 (322-393)||(19418049-19418120)
chr3 (458-501)||(38471644-38471686)
chr3 (319-393)||(44910815-44910890)
chr3 (318-393)||(46092844-46092919)
chr3 (457-503)||(2280177-2280222)
chr3 (457-503)||(8254027-8254072)
chr3 (457-503)||(14839071-14839116)
chr3 (457-503)||(16295464-16295509)
chr3 (457-503)||(32931944-32931989)
chr3 (457-503)||(36818956-36819001)
chr3 (331-393)||(37215129-37215191)
chr3 (461-503)||(48405410-48405451)
chr3 (319-392)||(55344181-55344255)
chr3 (321-393)||(23906874-23906947)
chr3 (462-503)||(29573387-29573427)
chr3 (457-502)||(44689793-44689837)
chr3 (458-503)||(48944737-48944781)
chr3 (322-389)||(1208060-1208128)
chr3 (321-392)||(6126566-6126638)
chr3 (321-369)||(7293987-7294035)
chr3 (319-391)||(24551113-24551185)
chr3 (323-391)||(30839570-30839638)
chr3 (322-393)||(33007471-33007543)
chr3 (321-393)||(41111960-41112032)
chr3 (462-502)||(47101523-47101562)
chr3 (321-369)||(51672998-51673046)
chr3 (322-393)||(54233389-54233461)
[»] chr7 (40 HSPs)
chr7 (80-207)||(3412149-3412277)
chr7 (87-144)||(30275315-30275372)
chr7 (317-393)||(12141995-12142071)
chr7 (322-393)||(5978690-5978761)
chr7 (319-393)||(46651783-46651857)
chr7 (457-503)||(47944982-47945028)
chr7 (457-503)||(47950412-47950458)
chr7 (322-369)||(10591287-10591334)
chr7 (322-393)||(28824614-28824685)
chr7 (322-392)||(40717127-40717198)
chr7 (457-503)||(33050183-33050228)
chr7 (87-145)||(36683940-36683998)
chr7 (321-393)||(10014842-10014915)
chr7 (320-393)||(37351877-37351950)
chr7 (319-385)||(8792486-8792549)
chr7 (321-393)||(17500808-17500880)
chr7 (321-393)||(17552334-17552406)
chr7 (320-356)||(29355480-29355516)
chr7 (319-392)||(7807168-7807240)
chr7 (322-393)||(25887694-25887765)
chr7 (457-503)||(2347085-2347130)
chr7 (457-503)||(2600560-2600605)
chr7 (457-503)||(4971290-4971335)
chr7 (323-393)||(5724149-5724219)
chr7 (328-393)||(9031318-9031383)
chr7 (457-503)||(11789717-11789762)
chr7 (334-392)||(12102610-12102668)
chr7 (320-390)||(19510244-19510314)
chr7 (457-503)||(28548247-28548292)
chr7 (457-503)||(29763830-29763875)
chr7 (457-503)||(30538626-30538671)
chr7 (457-503)||(30864443-30864488)
chr7 (457-503)||(37969931-37969976)
chr7 (319-393)||(43445518-43445592)
chr7 (457-503)||(44511139-44511184)
chr7 (457-503)||(48639409-48639454)
chr7 (320-369)||(155868-155917)
chr7 (322-393)||(2790288-2790360)
chr7 (319-390)||(8742497-8742569)
chr7 (458-502)||(37325846-37325889)
[»] chr6 (22 HSPs)
chr6 (319-393)||(16336956-16337030)
chr6 (320-392)||(31517067-31517139)
chr6 (322-393)||(30733120-30733191)
chr6 (323-393)||(2340509-2340579)
chr6 (457-503)||(3339525-3339570)
chr6 (321-393)||(11785468-11785541)
chr6 (320-392)||(31480723-31480795)
chr6 (319-393)||(1803980-1804055)
chr6 (318-393)||(1897797-1897872)
chr6 (464-503)||(28965873-28965911)
chr6 (319-393)||(7693426-7693500)
chr6 (319-392)||(9954660-9954734)
chr6 (320-362)||(17457577-17457619)
chr6 (323-393)||(24752342-24752412)
chr6 (319-393)||(29383668-29383742)
chr6 (319-392)||(30906549-30906622)
chr6 (319-393)||(34021058-34021132)
chr6 (321-393)||(22491917-22491989)
chr6 (462-503)||(25127864-25127904)
chr6 (460-504)||(2056782-2056825)
chr6 (321-369)||(26378273-26378321)
chr6 (321-393)||(30622135-30622207)
[»] scaffold0148 (1 HSPs)
scaffold0148 (322-393)||(9562-9633)
[»] scaffold0036 (1 HSPs)
scaffold0036 (320-392)||(18116-18187)
[»] scaffold0018 (1 HSPs)
scaffold0018 (313-393)||(36110-36193)
[»] scaffold0651 (1 HSPs)
scaffold0651 (457-503)||(4872-4917)
[»] scaffold0014 (1 HSPs)
scaffold0014 (457-503)||(145061-145106)
[»] scaffold0049 (1 HSPs)
scaffold0049 (464-505)||(72202-72242)
[»] scaffold0020 (1 HSPs)
scaffold0020 (320-393)||(156017-156090)
[»] scaffold0194 (1 HSPs)
scaffold0194 (361-393)||(29738-29770)
[»] scaffold0115 (1 HSPs)
scaffold0115 (320-392)||(15076-15147)
[»] scaffold0024 (1 HSPs)
scaffold0024 (361-393)||(60578-60610)


Alignment Details
Target: chr8 (Bit Score: 320; Significance: 1e-180; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 13 - 393
Target Start/End: Complemental strand, 154782 - 154401
Alignment:
Q  13 gagagcacatgctcattaggaatctatcccacgacggttt-tgagattttggtggtctagcctagaaagaacttgcaatttggatcctaactaataaata 111  Q
    ||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  154782 gagagcacatgctcattaggaatctatcccatgatggtttctgagattttggtggtctagcctagaaagaacttgcaatttggatcctaactaataaata 154683  T
Q  112 tatataatcatcaaacctgattcaaaaaactaaacaannnnnnnagggtctaatagacccctaaaaagaaattttgaggcccaaatttcgtacttannnn 211  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||||||||||||||||||||||||||||||||||||        
T  154682 tatataatcatcaaacctgattcaaaaaactaaacaatttttttagggtctaatagatccctaaaaagaaattttgaggcccaaatttcgtacttatttt 154583  T
Q  212 nnngggcatacggcagtcgccttcttcactctgtctatctcctatatatattatgtaatgtttaataaacattaaaaagtcatataattgtctcgctaat 311  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  154582 ttggggcatacggcagtcgccttcttcactctgtctatctcctatatatattatgtaatgtttaataaacattaaaaagtcatataattgtctcgctaat 154483  T
Q  312 atttaacaaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  154482 atttaacaaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 154401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 44103951 - 44103877
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattt-tctctctttttattggt 392  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| ||||||  ||| |||||||||| ||||||    
T  44103951 aaagagtagtgatatttgaacaaccatttaagataactattgtgataacttttttttctctctcttttcattggt 44103877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 21273598 - 21273669
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||||||| | || | |||||| |||||||||||||  ||||||||||||| ||||||    
T  21273598 agagtagtgatatttgaacaactatttcatacaacttttgtgacaacttttcttttctctcttttcattggt 21273669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 23258217 - 23258143
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||||||| || | |||| | ||||||||||||   ||||||||||||| |||||||    
T  23258217 aaagagtagtgatatttgaacaaccatttgaaacaatttttgtgacaacttcttttttctctcttttcattggtc 23258143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 12668751 - 12668808
Alignment:
Q  327 gtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctcttt 384  Q
    |||||||||||||||| |||| | | |||| |||||||||||||||||||||||||||    
T  12668751 gtgatatttgaacaactaattgaaaaaacttttgtgacaactttcattttctctcttt 12668808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 5742683 - 5742728
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  5742683 gttgtacaaaagttgtaccaaaatgg-ttgtacaaatatcatttctc 5742728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 385
Target Start/End: Complemental strand, 3989089 - 3989024
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttt 385  Q
    |||||||||| ||||||||||||||| | ||||||||  |||||||||||   |||||||||||||    
T  3989089 aagagtagtgttatttgaacaaccaaatgagacaacttatgtgacaacttcttttttctctctttt 3989024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 392
Target Start/End: Original strand, 30925541 - 30925613
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactatt-gtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||||||||||||| || | |||||| || |||||||||||  ||||||||||||| ||||||    
T  30925541 aagagtagtgatatttgaacaaccattttatacaacttttggtgacaacttt-tttttctctcttttcattggt 30925613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 32237036 - 32236991
Alignment:
Q  87 caatttggatcctaactaataaatatatataatcatcaaacctgat 132  Q
    |||||||| ||||||||||||||||||||||| |||||||| ||||    
T  32237036 caatttgggtcctaactaataaatatatataaacatcaaacttgat 32236991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 2768347 - 2768275
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||| | ||||| ||  ||||||||||||||||||||||  ||| | |||| |||||||||    
T  2768347 agagtagtgatatttgtagaaccatttgcgacaactattgtgacaactttctctttgtttcttcttattggtc 2768275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 393
Target Start/End: Complemental strand, 35594687 - 35594655
Alignment:
Q  361 tgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||||||||||||||    
T  35594687 tgacaactttcattttctctctttttattggtc 35594655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 505
Target Start/End: Original strand, 10644833 - 10644875
Alignment:
Q  462 acaaaagttgtaacaaaatggtttgtacaaatatcatttctcga 505  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    
T  10644833 acaaaagttgttacaaaatggtt-gtacaaatatcatttctcga 10644875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 390
Target Start/End: Complemental strand, 20284884 - 20284821
Alignment:
Q  328 tgatatttgaacaaccaattaa-gacaactattgtgacaactttcattttctctctttttattg 390  Q
    ||||||||||||||||| || | ||||||| |||||||||| ||| ||||||||||| ||||||    
T  20284884 tgatatttgaacaaccatttgatgacaacttttgtgacaaccttctttttctctcttcttattg 20284821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 390
Target Start/End: Complemental strand, 21071513 - 21071450
Alignment:
Q  328 tgatatttgaacaaccaattaa-gacaactattgtgacaactttcattttctctctttttattg 390  Q
    ||||||||||||||||| || | ||||||| |||||||||| ||| ||||||||||| ||||||    
T  21071513 tgatatttgaacaaccatttgatgacaacttttgtgacaaccttctttttctctcttcttattg 21071450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 45101579 - 45101509
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactatt-gtgacaactttcattttctctctttttattgg 391  Q
    |||||||||||||||||||||||| || | |||||| || |||||||||||  ||||||||||||| |||||    
T  45101579 agagtagtgatatttgaacaaccatttcatacaacttttggtgacaacttt-tttttctctcttttcattgg 45101509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 21418481 - 21418551
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    |||||||| |||||||||||| || | ||||||||  |||||||||||   |||||| |||||||||||||    
T  21418481 gagtagtgttatttgaacaactaaatgagacaacttatgtgacaacttattttttctatctttttattggt 21418551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 21649194 - 21649239
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||||    
T  21649194 gttgtacaaaagttgtacaaaaatgg-ttgtacaaatatcatttctc 21649239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 27300391 - 27300346
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  27300391 gttgtacaaaagttgtacaaaaatggtt-gtacaaatatcatttctc 27300346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 28156248 - 28156203
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||    
T  28156248 gttgtacaaaaattgtaccaaaatggtt-gtacaaatatcatttctc 28156203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 32674258 - 32674303
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||    
T  32674258 gttgtacaaaagttataccaaaatgg-ttgtacaaatatcatttctc 32674303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 35701853 - 35701898
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||||    
T  35701853 gttgtacaaaagttgtacaaaaatgg-ttgtacaaatatcatttctc 35701898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 35937538 - 35937583
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  35937538 gttgtccaaaagttgttacaaaatgg-ttgtacaaatatcatttctc 35937583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 322 - 392
Target Start/End: Complemental strand, 40102205 - 40102135
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    |||||||| ||||||||||||||  | |||||||| ||||||||||||   || |||||||||| ||||||    
T  40102205 gagtagtgttatttgaacaaccatatgagacaacttttgtgacaacttattttctctctcttttcattggt 40102135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 41273560 - 41273515
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| ||||| || |||||||||||||||||||||    
T  41273560 gttgtacaaaagttgtcacaaattg-tttgtacaaatatcatttctc 41273515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 41344555 - 41344629
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||| ||| || |||||||| || ||| |||||   || |||||||||| |||||||    
T  41344555 aaagagtagtgatatttgaacatccatttgagacaactcttatgataacttcttttctctctcttttcattggtc 41344629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 43605555 - 43605629
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaa-gacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||| ||||||||||||||||  |||  ||||||| |||||||||| | | ||||||||||| |||||||||    
T  43605555 aagagtaatgatatttgaacaaccttttagtgacaacttttgtgacaacctaccttttctctcttcttattggtc 43605629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 11139080 - 11139007
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaa-gacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||| ||| | |||| | ||||||| | |||||||||||  |||||| ||||||||||||||    
T  11139080 agagtagtgatatttgtacatcaaattgatgacaactttggtgacaactttgtttttctatctttttattggtc 11139007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 503
Target Start/End: Original strand, 22203242 - 22203286
Alignment:
Q  458 ttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||||    
T  22203242 ttgtacaaaagttgtacaaaaatggtt-gtacaaatatcatttctc 22203286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 503
Target Start/End: Original strand, 37784401 - 37784445
Alignment:
Q  458 ttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||| || |||||||||| ||||||||||||||||||    
T  37784401 ttgtacaaaagttataccaaaatggtt-gtacaaatatcatttctc 37784445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 385
Target Start/End: Original strand, 40413250 - 40413315
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttt 385  Q
    ||||||||||||||||||||||||| || | |||||| || ||| |||||   |||||||||||||    
T  40413250 aagagtagtgatatttgaacaaccatttgatacaacttttatgataacttcttttttctctctttt 40413315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 369
Target Start/End: Complemental strand, 43403968 - 43403919
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactt 369  Q
    ||||||||||||||||||||||| | || |||||||| | ||||||||||    
T  43403968 aagagtagtgatatttgaacaactatttgagacaactttcgtgacaactt 43403919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 463 - 503
Target Start/End: Complemental strand, 1248292 - 1248253
Alignment:
Q  463 caaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||| ||||||||| ||||||||||||||||||    
T  1248292 caaaagttgtaagaaaatggtt-gtacaaatatcatttctc 1248253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 14029130 - 14029202
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactatt-gtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||| |||||||| || |||||||| || ||||||||||   || |||||||||| ||||||    
T  14029130 agagtagtgatattttaacaaccatttgagacaacttttggtgacaacttattttctctctcttttcattggt 14029202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 503
Target Start/End: Complemental strand, 20288576 - 20288533
Alignment:
Q  459 tgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||    
T  20288576 tgtacaaaagttgtcacaaattggtt-gtacaaatatcatttctc 20288533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 503
Target Start/End: Complemental strand, 21075205 - 21075162
Alignment:
Q  459 tgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||    
T  21075205 tgtacaaaagttgtcacaaattggtt-gtacaaatatcatttctc 21075162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 325 - 393
Target Start/End: Complemental strand, 24503096 - 24503028
Alignment:
Q  325 tagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||| |||||||| ||||| || |||||||| || |||||||||   ||||||||||||| |||||||    
T  24503096 tagtgttatttgaataaccatttgagacaacttttatgacaacttcatttttctctcttttcattggtc 24503028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 326 - 393
Target Start/End: Complemental strand, 30129588 - 30129520
Alignment:
Q  326 agtgatatttgaacaaccaattaa-gacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||| ||| |||||| | ||||||| | |||||||||||  ||||||||||| |||||||||    
T  30129588 agtgatatttgtacatccaattgatgacaactttggtgacaactttgcttttctctcttcttattggtc 30129520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 386
Target Start/End: Complemental strand, 34474136 - 34474069
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactatt-gtgacaactttcattttctctcttttt 386  Q
    |||||||| ||||||||||||||||| || | |||||| || |||||||| ||| ||||||||||||||    
T  34474136 aaagagtaatgatatttgaacaaccatttcatacaacttttggtgacaac-ttctttttctctcttttt 34474069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 505
Target Start/End: Original strand, 37568640 - 37568687
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctcga 505  Q
    |||||| |||| |||| |||||||| |||||||||||||||||||||||    
T  37568640 gttgtataaaaattgtcacaaaatg-tttgtacaaatatcatttctcga 37568687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 325 - 393
Target Start/End: Original strand, 38128418 - 38128486
Alignment:
Q  325 tagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||| || | |||| | ||||||||||||   ||||||| ||||| |||||||    
T  38128418 tagtgatatttgaacaaccattttaaacaatttttgtgacaacttcttttttctcacttttcattggtc 38128486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 320 - 391
Target Start/End: Original strand, 42543367 - 42543439
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactatt-gtgacaactttcattttctctctttttattgg 391  Q
    ||||||||||||| ||||||||||| || | |||||| || ||||||||||   ||||||||||||| |||||    
T  42543367 aagagtagtgataattgaacaaccatttcatacaacttttggtgacaacttcttttttctctcttttcattgg 42543439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 504
Target Start/End: Original strand, 43602456 - 43602495
Alignment:
Q  464 aaaagttgtaacaaaatggtttgtacaaatatcatttctcg 504  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  43602456 aaaagttgtagcaaaatggtt-gtacaaatatcatttctcg 43602495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 4e-40; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 541 - 649
Target Start/End: Original strand, 6295433 - 6295541
Alignment:
Q  541 gttgaaattagattctcagtagtcgtcacaatagtggccactcgattaaaattaaaatgtttagattttgatttaataaaatttaaaaccaaagattgaa 640  Q
    |||||||||||||||||  |||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6295433 gttgaaattagattctctatagtcgtcacatcagtggccgctcgattaagattaaaatgtttagattttgatttaataaaatttaaaaccaaagattgaa 6295532  T
Q  641 atatatatt 649  Q
    |||||||||    
T  6295533 atatatatt 6295541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 14902304 - 14902419
Alignment:
Q  87 caatttggatcctaactaataaatatatataatcatcaaacctgattcaaaaaactaaacaannnnnnnagggtctaatagacccctaaaaagaaatttt 186  Q
    |||||||| ||||||||||||||||||||||| |||||||  |||| | ||||||||| |||       ||||||||||||||||||||||  ||| |||    
T  14902304 caatttgggtcctaactaataaatatatataaacatcaaatttgatac-aaaaactaagcaattttgttagggtctaatagacccctaaaagaaaaattt 14902402  T
Q  187 gaggcccaaatttcgta 203  Q
    |  |||||||| |||||    
T  14902403 ggagcccaaatatcgta 14902419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 312 - 393
Target Start/End: Complemental strand, 22390344 - 22390263
Alignment:
Q  312 atttaacaaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||| ||||||||| |||||||||||| ||| || |||||||| ||||||||||||   || |||||||||| |||||||    
T  22390344 atttaataaagagtagagatatttgaacatccatttgagacaactcttgtgacaacttcttttctctctcttttcattggtc 22390263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 36133159 - 36133086
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||||||||| | || | |||||| ||||||||||||   ||||||||||||| ||||||    
T  36133159 aaagagtagtgatatttgaacaactatttcatacaacttttgtgacaacttcttttttctctcttttcattggt 36133086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 322 - 393
Target Start/End: Original strand, 10749568 - 10749639
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||| ||  |||||||||  ||||||||| | ||| |||||||| ||||||||    
T  10749568 gagtagtgatatttgaacaaccatttttgacaactatcatgacaacttccttttcctctctttctattggtc 10749639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 43791676 - 43791751
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaa-gacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||| ||||||||||||||||  |||  ||||||| |||||||||| | | |||||||||||||||||||||    
T  43791676 aaagagtaatgatatttgaacaaccttttagtgacaacttttgtgacaacctaccttttctctctttttattggtc 43791751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 3091926 - 3091852
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||||  | || | |||||| ||||||||||||   ||||||||||||| |||||||    
T  3091926 aaagagtagtgatatttgaacaattatttgatacaacttttgtgacaacttcttttttctctcttttcattggtc 3091852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 23045346 - 23045272
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||| ||||||||||||||| | ||||||||  |||||||||||   |||||||| |||| |||||||    
T  23045346 aaagagtagtgttatttgaacaaccaaatgagacaacttatgtgacaacttcttttttctctattttcattggtc 23045272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 32750183 - 32750109
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||| ||||||||||||||  | |||||| | ||||||||||||   ||||||||||||| |||||||    
T  32750183 aaagagtagtgttatttgaacaaccatatgagacaatttttgtgacaacttattttttctctcttttcattggtc 32750109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 383
Target Start/End: Original strand, 2308213 - 2308274
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctt 383  Q
    ||||||||||||||| |||||||  || ||||||| |  |||||||||||||||||||||||    
T  2308213 gagtagtgatatttgtacaaccatatatgacaactttgatgacaactttcattttctctctt 2308274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 393
Target Start/End: Complemental strand, 13104663 - 13104590
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||| ||||||||||||||  | |||||| | ||||||||||||   ||||||||||||| |||||||    
T  13104663 aagagtagtgttatttgaacaaccatatgagacaatttttgtgacaacttattttttctctcttttcattggtc 13104590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 13711246 - 13711173
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||||||||| | ||   |||||| ||||||||||||   ||||||||||||| ||||||    
T  13711246 aaagagtagtgatatttgaacaactattttgtacaacttttgtgacaacttcttttttctctcttttcattggt 13711173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 2013173 - 2013245
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||| |||| ||| || |||||||| ||||||||||||   || |||||||||| |||||||    
T  2013173 agagtagtgatattttaacatccatttgagacaactcttgtgacaacttattttctctctcttttcattggtc 2013245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 19913968 - 19913896
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactat-tgtgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||||||||| || | |||||| |  |||||||||||  ||||||||||||| ||||||    
T  19913968 agagtagtgatatttgaacaaccatttcatacaactttcggtgacaactttttttttctctcttttcattggt 19913896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 11164264 - 11164335
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    ||||| |||||||||||||||| | || | |||||| ||||||||||||   ||||||||||||| ||||||    
T  11164264 agagtggtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggt 11164335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 393
Target Start/End: Original strand, 11229210 - 11229281
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||| || |||||||| |||  |||||||   ||||||| ||||| |||||||    
T  11229210 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttcttttttctcacttttcattggtc 11229281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 392
Target Start/End: Complemental strand, 12600227 - 12600160
Alignment:
Q  325 tagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||| | || | |||||| ||||||||||||   ||||||||||||| ||||||    
T  12600227 tagtgatatttgaacaactatttcatacaacttttgtgacaacttcttttttctctcttttcattggt 12600160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 393
Target Start/End: Original strand, 14140228 - 14140299
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||| || |||| | |||| ||||||||| ||   ||||||||||||| |||||||    
T  14140228 gagtagtgatatttgaacaatcatttaaaataacttttgtgacaatttcttttttctctcttttcattggtc 14140299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 15019036 - 15019103
Alignment:
Q  326 agtgatatttgaacaaccaattaagacaactattg-tgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||||||| || || ||||| ||| ||||||||||  |||||||| |||||||||||    
T  15019036 agtgatatttgaacaaccatttgaggcaacttttgatgacaactttttttttctctttttttattggt 15019103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 393
Target Start/End: Original strand, 19695581 - 19695651
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||| ||||||||||||||| | ||||||||  ||||||||||||  ||| ||||||||| |||||||    
T  19695581 gagtagtgttatttgaacaaccaaatgagacaacttatgtgacaacttt-ttttcctctcttttcattggtc 19695651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 358 - 393
Target Start/End: Complemental strand, 25994247 - 25994212
Alignment:
Q  358 ttgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||||||| |||||||||    
T  25994247 ttgtgacaactttcattttctctcttcttattggtc 25994212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 358 - 393
Target Start/End: Original strand, 25997655 - 25997690
Alignment:
Q  358 ttgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||| ||||||||||||||||||||||    
T  25997655 ttgtgacaacttttattttctctctttttattggtc 25997690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 44190010 - 44189938
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||| ||| |  |||||||| |||||||||| |   ||||||||||||| |||||||    
T  44190010 aaagagtagtgatatttgaacatccattcgagacaactcttgtgacaacat--cttttctctcttttcattggtc 44189938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 5852519 - 5852474
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  5852519 gttgtacaaaagttgtacaaaaatggtt-gtacaaatatcatttctc 5852474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 11728147 - 11728192
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  11728147 gttgtacaaaagttgtaccaaaatgg-ttgtacaaacatcatttctc 11728192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 30340038 - 30339993
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  30340038 gttgtacaaaagttgtacaaaaatggtt-gtacaaatatcatttctc 30339993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 30487495 - 30487540
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  30487495 gttgtacaaaagttgtcacaaattgg-ttgtacaaatatcatttctc 30487540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 320 - 393
Target Start/End: Complemental strand, 34249765 - 34249691
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactt-tcattttctctctttttattggtc 393  Q
    |||||||||| ||||||||||||||  | |||||| | |||||||||||| |  ||||||||||||| |||||||    
T  34249765 aagagtagtgttatttgaacaaccatatgagacaatttttgtgacaacttatttttttctctcttttcattggtc 34249691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 36383507 - 36383462
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||    
T  36383507 gttgtacaaaagttgtcacaaaatc-tttgtacaaatatcatttctc 36383462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 36909869 - 36909914
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  36909869 gttgtccaaaagttgtcacaaaatgg-ttgtacaaatatcatttctc 36909914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 40721816 - 40721771
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||||    
T  40721816 gttgtacaaaagttgtaccaaaatgg-ctgtacaaatatcatttctc 40721771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 390
Target Start/End: Original strand, 42283129 - 42283207
Alignment:
Q  312 atttaacaaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattg 390  Q
    ||||||||| ||||||||||||||||||||||| || |  ||| | |||||| |||| | ||||| |||||||| ||||    
T  42283129 atttaacaatgagtagtgatatttgaacaaccatttcattcaatttttgtgataactattattttttctcttttcattg 42283207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 44484682 - 44484727
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||| |||| ||||||||| ||||||||||||||||||||    
T  44484682 gttgtacaaaaattgttacaaaatgg-ttgtacaaatatcatttctc 44484727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 393
Target Start/End: Original strand, 36816300 - 36816376
Alignment:
Q  317 acaaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcatttt-ctctctttttattggtc 393  Q
    ||||||||||||||||||||||||| || ||  |||||||||  ||||||| | |||||| |||||||| ||||||||    
T  36816300 acaaagagtagtgatatttgaacaatcatttttgacaactatcatgacaac-tgcattttcctctctttctattggtc 36816376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 393
Target Start/End: Complemental strand, 43725393 - 43725316
Alignment:
Q  316 aacaaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||  |||||||||||||||||| || |||||||| |||  |||||||   ||||||| ||||| |||||||    
T  43725393 aacaaagagcggtgatatttgaacaaccattttagacaacttttggtacaacttcttttttctcacttttcattggtc 43725316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 463 - 503
Target Start/End: Complemental strand, 5031962 - 5031923
Alignment:
Q  463 caaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||| ||||||||||| ||||||||||||||||||    
T  5031962 caaaagttgttacaaaatggtt-gtacaaatatcatttctc 5031923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 7086012 - 7086084
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||| ||||||||||||||  | |||||| | ||||||||||||   || |||||||||| |||||||    
T  7086012 agagtagtgttatttgaacaaccatatgagacaatttttgtgacaacttattttctctctcttttcattggtc 7086084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 322 - 390
Target Start/End: Complemental strand, 14714168 - 14714100
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattg 390  Q
    ||||||||||||||||||| ||| || |||||| | ||||||||||||   || |||||||||| ||||    
T  14714168 gagtagtgatatttgaacatccatttgagacaatttttgtgacaacttcttttctctctcttttcattg 14714100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 371
Target Start/End: Complemental strand, 27490804 - 27490752
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttc 371  Q
    |||||| | ||||||||||||||||| ||  ||||||| ||||||||||||||    
T  27490804 aaagagaaatgatatttgaacaaccatttttgacaacttttgtgacaactttc 27490752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 42665700 - 42665772
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||| ||||||| ||   |||||| |  ||||||||||||||| |||| |||| |||||||    
T  42665700 agagtagtgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctcttttttcattggtc 42665772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 2e-29; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 80 - 203
Target Start/End: Complemental strand, 42312970 - 42312847
Alignment:
Q  80 gaacttgcaatttggatcctaactaataaatatatataatcatcaaacctgattcaaaaaactaaacaannnnnnnagggtctaatagacccctaaaaag 179  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||       ||||  |||||||||| ||||||     
T  42312970 gaacctgcaatttggatcctgactaataaatatatataaacatcaaatctgattcaaaaaactaaacaatttttttagggcttaatagacccttaaaaat 42312871  T
Q  180 aaattttgaggcccaaatttcgta 203  Q
    |||||||| |||||||||||||||    
T  42312870 aaattttggggcccaaatttcgta 42312847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 18610952 - 18610881
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  18610952 gagtagtgatatttgaacaattaattaagacaacttttgtgacaactttcctttcctctctttttattggtc 18610881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 320 - 393
Target Start/End: Complemental strand, 41558177 - 41558104
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||| ||||||| ||  |||||||||||||||||||||| |||||| |||| |||||||||    
T  41558177 aagagtagtgatatttgtacaaccatttgtgacaactattgtgacaactttccttttctttcttcttattggtc 41558104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 6841973 - 6841902
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||| ||||||||||||||| | ||  |||||||||  ||||||||||| |||||||||||||||||||||    
T  6841973 gagtactgatatttgaacaactatttttgacaactatcatgacaactttctttttctctctttttattggtc 6841902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 392
Target Start/End: Complemental strand, 37516093 - 37516024
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||||||||||| || |||||| || ||||||||||||  ||||||||||||| ||||||    
T  37516093 gagtagtgatatttgaacaaccacttgagacaattactgtgacaacttt-tttttctctcttttcattggt 37516024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 30530286 - 30530359
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||| || ||||||| ||  ||||||| |  ||||||||||||||||||||||| |||||||||    
T  30530286 aagagtagtgatatatgtacaaccatttgggacaactttgatgacaactttcattttctctcttcttattggtc 30530359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 5450671 - 5450727
Alignment:
Q  88 aatttggatcctaactaataaatatatataatcatcaaacctgattcaaaaaactaa 144  Q
    |||||||||| |||||||||||||||||||| |||||||| |||| |||| ||||||    
T  5450671 aatttggatcataactaataaatatatataaacatcaaacttgatacaaagaactaa 5450727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 8464401 - 8464473
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||| || ||||||| ||  | ||||| |  |||||||||||||||||||||||||||||||||    
T  8464401 agagtagtgatatatgtacaaccacttgggccaactttgatgacaactttcattttctctctttttattggtc 8464473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 320 - 391
Target Start/End: Complemental strand, 15062030 - 15061958
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactatt-gtgacaactttcattttctctctttttattgg 391  Q
    ||||||||||||||||||||||||| || | | |||| || |||||||||||  |||||||||||||||||||    
T  15062030 aagagtagtgatatttgaacaaccatttcatataacttttggtgacaactttttttttctctctttttattgg 15061958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 39010997 - 39010925
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||| ||||||||||||||  | |||||||| ||||||||||||   ||||||||||||| |||||||    
T  39010997 agagtagtgttatttgaacaaccatatgagacaacttttgtgacaacttattttttctctcttttcattggtc 39010925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 318 - 393
Target Start/End: Complemental strand, 366843 - 366768
Alignment:
Q  318 caaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||| || ||||||||||||||| | ||||||||  ||||||||||||  ||| ||||||||| |||||||    
T  366843 caaagagtaatgttatttgaacaaccaaatgagacaacttatgtgacaacttttttttcctctcttttcattggtc 366768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 40610411 - 40610340
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||| ||| || |||||||| ||||||||||||   || |||||||||| |||||||    
T  40610411 gagtagtgatatttgaacatccatttgagacaacttttgtgacaacttcttttctctctcttttcattggtc 40610340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 49453662 - 49453592
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||||||||| | || | |||||| ||||||||||||   ||||||||||||| ||||||    
T  49453662 aaagagtagtgatatttgaacaactatttgatacaacttttgtgacaactt---ttttctctcttttcattggt 49453592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 8934421 - 8934494
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||||| ||  ||||| |  | ||||||||||| |||||||| || |||||||||    
T  8934421 aagagtagtgatatttgaacaaccatttgtgacaatttctatgacaactttctttttctcttttcttattggtc 8934494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 51571609 - 51571539
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||| |||||||||||||||||| |||| |||||| ||||||||||||   |||| |||||||| |||||||    
T  51571609 agagttgtgatatttgaacaaccatttaatacaacttttgtgacaactt--cttttttctcttttcattggtc 51571539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 30631733 - 30631805
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||||| || |||||||| |||  |||||||   ||||||| ||||| |||||||    
T  30631733 agagtagtgatatttgaacaaccattttagacaacttttggtacaacttcttttttctcacttttcattggtc 30631805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 46948162 - 46948114
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactt 369  Q
    |||||||||||||||||||| ||| || |||||||| ||||||||||||    
T  46948162 agagtagtgatatttgaacatccatttgagacaactcttgtgacaactt 46948114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 320 - 363
Target Start/End: Complemental strand, 28716327 - 28716284
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtga 363  Q
    ||||||||||||||||||||||||| || |||||||| ||||||    
T  28716327 aagagtagtgatatttgaacaaccatttgagacaacttttgtga 28716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 504
Target Start/End: Original strand, 35972830 - 35972876
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctcg 504  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||||||    
T  35972830 gttgtacaaaagttgtcacaaaatgg-ttgaacaaatatcatttctcg 35972876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 43755572 - 43755623
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaacttt 370  Q
    |||||||| ||||||||||||| ||| || |||||||| |||||||||||||    
T  43755572 aaagagtaatgatatttgaacatccatttgagacaactcttgtgacaacttt 43755623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 500
Target Start/End: Original strand, 48336464 - 48336506
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcattt 500  Q
    ||||||||||||||||| |||||||| |||||||||||||||||    
T  48336464 gttgtacaaaagttgtatcaaaatgg-ttgtacaaatatcattt 48336506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 385
Target Start/End: Complemental strand, 1615222 - 1615156
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttt 385  Q
    |||| |||||| ||||||||||||||  | ||| |||| ||||||||||||  ||||||||||||||    
T  1615222 aaagggtagtgttatttgaacaaccatatgagataacttttgtgacaacttatattttctctctttt 1615156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 6396372 - 6396327
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||    
T  6396372 gttgtacaaaagttgtaccaaaatgg-ttgtaccaatatcatttctc 6396327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 12999848 - 12999893
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| | ||||||| ||||||||||||||||||||    
T  12999848 gttgtacaaaagttgttagaaaatgg-ttgtacaaatatcatttctc 12999893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 22389412 - 22389485
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||| ||||||||||||||||| || |  ||||| ||||||||||||   ||||||||||||| |||||||    
T  22389412 aaagagtaatgatatttgaacaaccatttga-tcaacttttgtgacaacttcttttttctctcttttcattggtc 22389485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 31290097 - 31290167
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    |||| |||||||||||||||||| || | |||||| ||||||||||||   |||||||| |||| ||||||    
T  31290097 gagtggtgatatttgaacaaccatttcacacaacttttgtgacaacttattttttctcttttttcattggt 31290167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 36930642 - 36930716
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||| | ||||||||||||||||| ||   |||||  || ||||||| ||| |||||||||||||||||||||    
T  36930642 aaagagcaatgatatttgaacaaccattttgtacaacctttttgacaaccttctttttctctctttttattggtc 36930716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 41564906 - 41564951
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||||    
T  41564906 gttgtacaaaagttgtacaaaaatgg-ttgtacaaatatcatttctc 41564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 42256505 - 42256460
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  42256505 gttgtaccaaagttgtcacaaaatggtt-gtacaaatatcatttctc 42256460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 50017309 - 50017383
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||| |||||| || ||||||| || |||||||| |  ||| |||||||| |||||||||||| |||||||    
T  50017309 aaagagtactgatatatgtacaaccatttgagacaactttgttgataactttcaatttctctcttttcattggtc 50017383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 5315396 - 5315323
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||| ||| || ||||||| || |||||||| |  |||| ||||||||||||||| || ||||||||    
T  5315396 aaagagtagtgctatatgtacaaccattttagacaactttgatgacgactttcattttctcttttcttattggt 5315323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 17390822 - 17390757
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctcttt 384  Q
    |||||||||||||||||||||||| | ||  |||||||||  ||||||||||  ||| ||||||||    
T  17390822 aaagagtagtgatatttgaacaactatttttgacaactatcatgacaacttttttttcctctcttt 17390757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 503
Target Start/End: Original strand, 21433432 - 21433472
Alignment:
Q  462 acaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  21433432 acaaaagttgttacaaaatggtt-gtacaaatatcatttctc 21433472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 503
Target Start/End: Original strand, 23400016 - 23400060
Alignment:
Q  458 ttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||||    
T  23400016 ttgtacaaaagttgtataaaaatggtt-gtacaaatatcatttctc 23400060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 393
Target Start/End: Complemental strand, 34187448 - 34187375
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||| |||||||||||||||||||  | |||||| |  |||||||||||   ||||||||||||| |||||||    
T  34187448 aagaggagtgatatttgaacaaccatgtgagacaatttatgtgacaacttctcttttctctcttttcattggtc 34187375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 382
Target Start/End: Original strand, 36690461 - 36690519
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctct 382  Q
    |||||||| ||||||||||||||  | |||||||| ||||||||||||  |||||||||||    
T  36690461 gagtagtgttatttgaacaaccatatgagacaacttttgtgacaactt--attttctctct 36690519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 382
Target Start/End: Original strand, 36706562 - 36706620
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctct 382  Q
    |||||||| ||||||||||||||  | |||||||| ||||||||||||  |||||||||||    
T  36706562 gagtagtgttatttgaacaaccatatgagacaacttttgtgacaactt--attttctctct 36706620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 391
Target Start/End: Original strand, 48872837 - 48872909
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactatt-gtgacaactttcattttctctctttttattgg 391  Q
    |||||||||||||||||||||||||| || | |||||| || |||||||||||  || |||||||||| |||||    
T  48872837 aaagagtagtgatatttgaacaaccatttcatacaacttttggtgacaacttt-tttctctctcttttcattgg 48872909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 392
Target Start/End: Original strand, 51703002 - 51703070
Alignment:
Q  323 agtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||||||| || |||||||| |||||| || |||  |||||| |||||| ||||||    
T  51703002 agtagtgatatttgaacaaccatttcagacaacttttgtgataattttttttttct-tcttttcattggt 51703070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 325 - 392
Target Start/End: Original strand, 25302536 - 25302604
Alignment:
Q  325 tagtgatatttgaacaac-caattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||| || || |||||| |  ||||||||||||  ||||||||||||| ||||||    
T  25302536 tagtgatatttgaacaactcattttagacaatttatgtgacaactttttttttctctcttttcattggt 25302604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 32821811 - 32821747
Alignment:
Q  328 tgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||||| || | | ||||  | ||||||| ||||||||||||||||| ||||||    
T  32821811 tgatatttgaacaaccatttgataaaacttatttgacaacattcattttctctcttttcattggt 32821747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 501
Target Start/End: Original strand, 50035563 - 50035606
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttc 501  Q
    |||||| ||||||||| ||||||||| ||||||||||||||||||    
T  50035563 gttgtataaaagttgtcacaaaatgg-ttgtacaaatatcatttc 50035606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 1e-21; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 11063976 - 11064049
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||| ||||||||| ||||    
T  11063976 aagagtagtgatatttgaacaaccatttaagacaactttggtgacaactttcattttctttctttttatcggtc 11064049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 41668893 - 41668983
Alignment:
Q  88 aatttggatcctaactaataaatatatataatcatcaaacctgattcaaaaaactaaacaannnnnnnagggtctaatagacccctaaaaa 178  Q
    ||||||| ||||||||||||||||||||||| |||||||| |||| ||||||||||| |||       |||| ||||||||||||||||||    
T  41668893 aatttgggtcctaactaataaatatatataaacatcaaacttgatacaaaaaactaagcaatttttttagggcctaatagacccctaaaaa 41668983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 322 - 393
Target Start/End: Original strand, 5234360 - 5234431
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||| || | |||||| ||||||||| |||  |||||||||||||||||||||    
T  5234360 gagtagtgatatttgaacaaccatttgatacaacttttgtgacaattttttttttctctctttttattggtc 5234431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 7372702 - 7372583
Alignment:
Q  87 caatttggatcctaactaataaatatatataatcatcaaacctgattcaaaaaactaaacaannnnnnnagggtctaatagacccctaaaaagaaatttt 186  Q
    ||||||||||| |||||||||||||||||||| |||||||  |||| ||||||||||| |||       |||| |||||| |||| |||| | ||||||     
T  7372702 caatttggatcttaactaataaatatatataaacatcaaatttgatacaaaaaactaagcaatttttttagggcctaatatacccttaaata-aaatttg 7372604  T
Q  187 gaggcccaaatttcgtactta 207  Q
    | ||||||||||| |||||||    
T  7372603 ggggcccaaattttgtactta 7372583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 322 - 393
Target Start/End: Original strand, 16004216 - 16004286
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||| ||| || |||||||| |||||||||||||  ||||||||||||| |||||||    
T  16004216 gagtagtgatatttgaacatccatttgagacaactcttgtgacaacttt-tttttctctcttttcattggtc 16004286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 28480427 - 28480497
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||||||||| | || |||||||||||||||||||||   || |||||||||| ||||||    
T  28480427 gagtagtgatatttgaacaactatttgagacaactattgtgacaacttcttttctctctcttttcattggt 28480497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 28481301 - 28481371
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||||||||| | || |||||||||||||||||||||   || |||||||||| ||||||    
T  28481301 gagtagtgatatttgaacaactatttgagacaactattgtgacaacttcttttctctctcttttcattggt 28481371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 28482176 - 28482246
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||||||||| | || |||||||||||||||||||||   || |||||||||| ||||||    
T  28482176 gagtagtgatatttgaacaactatttgagacaactattgtgacaacttcttttctctctcttttcattggt 28482246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 42915105 - 42915178
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||||||||| | || | |||||| ||||||||||||   ||||||||||||| ||||||    
T  42915105 aaagagtagtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggt 42915178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 31275329 - 31275257
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||||| || | |||||| ||||||||| ||   ||||||||||||| |||||||    
T  31275329 agagtagtgatatttgaacaaccatttgatacaacttttgtgacaatttcttttttctctcttttcattggtc 31275257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 32714029 - 32713957
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||| | || ||| || | | ||||||| ||||||||||||| ||||||||||||    
T  32714029 agagtagtgatatttgaacaacgatttgagataattttggtgacaattttcattttctctttttttattggtc 32713957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 386
Target Start/End: Complemental strand, 1033332 - 1033266
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctcttttt 386  Q
    ||||||||||||||||||||||||| || | |||||| ||||||||||||   |||||||| |||||    
T  1033332 aagagtagtgatatttgaacaaccattttaaacaacttttgtgacaacttcttttttctcttttttt 1033266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 391
Target Start/End: Original strand, 1580171 - 1580241
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaac-tattgtgacaactttcattttctctctttttattgg 391  Q
    ||||||||||||||||||||||| || | ||||| | |||||||||||||  ||||||||||||| |||||    
T  1580171 gagtagtgatatttgaacaaccatttcatacaactttttgtgacaactttttttttctctcttttcattgg 1580241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 393
Target Start/End: Original strand, 5123480 - 5123550
Alignment:
Q  323 agtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||| ||||||||||||||  | |||||||| ||||||||||||   ||||||||||||| |||||||    
T  5123480 agtagtgttatttgaacaaccatatgagacaacttttgtgacaacttattttttctctcttttaattggtc 5123550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 393
Target Start/End: Complemental strand, 24772855 - 24772782
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattt-tctctctttttattggtc 393  Q
    |||||| |||||||||||||| ||| || |||||||| ||||||||| |||| ||| ||||||||||||||||||    
T  24772855 aagagtggtgatatttgaacatccatttgagacaactcttgtgacaa-tttcttttctctctctttttattggtc 24772782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 392
Target Start/End: Complemental strand, 31240833 - 31240760
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactatt-gtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||||||||||||| || | |||||| || ||||||||||   ||||||||||||| ||||||    
T  31240833 aagagtagtgatatttgaacaaccatttcatacaacttttggtgacaacttcttttttctctcttttcattggt 31240760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 503
Target Start/End: Complemental strand, 35037653 - 35037609
Alignment:
Q  458 ttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  35037653 ttgtacaaaagttgtatcaaaatgg-ttgtacaaatatcatttctc 35037609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 39684808 - 39684736
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||  ||||||||||||||| | ||||||||  |||||||| ||| ||||  ||||||||||||||||    
T  39684808 agagtagtattatttgaacaaccaaatgagacaacttatgtgacaatttttatttcgtctctttttattggtc 39684736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 207
Target Start/End: Original strand, 40303498 - 40303631
Alignment:
Q  71 gcctagaaagaacttgcaatttggatcctaactaataaatatatataatcatcaaacctgattcaaaaaactaaacaannnnnnnagggtctaatagacc 170  Q
    |||||||  |||||| ||||||||| ||||||||||||||||||||||  |  |||| |||| | ||||| ||||  |       | |||||||||||||    
T  40303498 gcctagagtgaacttacaatttggaccctaactaataaatatatataaaaacgaaacttgatac-aaaaagtaaagcaattttttacggtctaatagacc 40303596  T
Q  171 cctaaaaagaaattttgaggcccaaatttcgtactta 207  Q
    |||||||  ||| |||||| |||||||||||||||||    
T  40303597 cctaaaa--aaaatttgagacccaaatttcgtactta 40303631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 385
Target Start/End: Complemental strand, 51389499 - 51389435
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttt 385  Q
    |||| ||||||||||||||||||| || | |||||| ||||||||||||   |||||||||||||    
T  51389499 agagcagtgatatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctctttt 51389435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 318 - 393
Target Start/End: Complemental strand, 55927170 - 55927095
Alignment:
Q  318 caaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattt-tctctctttttattggtc 393  Q
    ||||||||||||||||||||||| ||| || |||||| | ||||||||| |||| ||| |||||||||| |||||||    
T  55927170 caaagagtagtgatatttgaacatccatttgagacaatttttgtgacaa-tttcttttctctctcttttcattggtc 55927095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 362 - 393
Target Start/End: Original strand, 2812522 - 2812553
Alignment:
Q  362 gacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||||||||||||    
T  2812522 gacaactttcattttctctctttttattggtc 2812553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 369
Target Start/End: Complemental strand, 15596578 - 15596531
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactt 369  Q
    ||||||||||||||||||||||| || | |||||| ||||||||||||    
T  15596578 gagtagtgatatttgaacaaccattttaaacaacttttgtgacaactt 15596531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 35580292 - 35580221
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||| ||||||||||| ||| | ||||||||  ||||||||||||  ||| ||||||||| |||||||    
T  35580292 gagtagtgttatttgaacaatcaaatgagacaacttatgtgacaacttttttttcctctcttttcattggtc 35580221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 326 - 393
Target Start/End: Original strand, 39844151 - 39844218
Alignment:
Q  326 agtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||| | |||| |||||||| || | |||||||   |||||||||||||||||||||    
T  39844151 agtgatatttgaacatctaattgagacaacttttttaacaacttcttttttctctctttttattggtc 39844218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 3475914 - 3475869
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||||    
T  3475914 gttgtacaaaagttgtcataaaatggtt-gtacaaatatcatttctc 3475869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 5208353 - 5208398
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  5208353 gttgtacaaaagttgtcacaaattgg-ttgtacaaatatcatttctc 5208398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 320 - 393
Target Start/End: Complemental strand, 6127038 - 6126964
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaa-gacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||| ||||||||||||||||  |||| ||||||| |||||||||| | | |||||||| || |||||||||    
T  6127038 aagagtaatgatatttgaacaaccttttaatgacaacttttgtgacaacctaccttttctcttttcttattggtc 6126964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 19246073 - 19245999
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||| |||||||| ||  |||||||||  ||| ||||| | ||| |||||||| ||||||||    
T  19246073 aaagagtagtgatatttaaacaaccatttttgacaactatcatgataacttccttttcctctctttctattggtc 19245999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 26442416 - 26442461
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||| ||||||||||| |||||||| ||||||||||||||||||||    
T  26442416 gttgtgcaaaagttgtaccaaaatgg-ttgtacaaatatcatttctc 26442461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 323 - 393
Target Start/End: Original strand, 29384087 - 29384157
Alignment:
Q  323 agtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||| ||  | | |||||| ||||||||||||  ||||||||| |||| |||||||    
T  29384087 agtagtgatatttgaacaatcatatgatacaactcttgtgacaacttctattttctcttttttcattggtc 29384157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 29863596 - 29863551
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||| || |||||||||| ||||||||||||||||||    
T  29863596 gttgtacaaaagttataccaaaatggtt-gtacaaatatcatttctc 29863551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 31318798 - 31318753
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||    
T  31318798 gttgtacaaaaattgtaccaaaatggtt-gtacaaatatcatttctc 31318753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 31658104 - 31658030
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||| |||||||||||||||| || | ||| || ||||||||||||   ||||||| ||||| |||||||    
T  31658104 aaagagtagcgatatttgaacaaccatttgatacagcttttgtgacaacttcttttttctcacttttcattggtc 31658030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 36792518 - 36792444
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactatt-gtgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||||||||||| || | |||||| || ||||||||||   || |||||||||| ||||||    
T  36792518 aaagagtagtgatatttgaacaaccatttcatacaacttttggtgacaacttcttttctctctcttttcattggt 36792444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 39241188 - 39241262
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactatt-gtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||||| |||||||| || |||||||| || ||||||||||   || |||||||||| ||||||    
T  39241188 aaagagtagtgatattttaacaaccatttgagacaacttttggtgacaacttattttctctctcttttcattggt 39241262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 47998778 - 47998705
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||| || || | |||||| |||||| ||||||  |||||| |||||| |||||||    
T  47998778 aaagagtagtgatatttgaacaatcatttgatacaacttttgtgataacttt-tttttctttcttttcattggtc 47998705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 51717170 - 51717244
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||| ||  | ||||||||  |||||||| ||   ||||||||||||| |||||||    
T  51717170 aaagagtagtgatatttgaacaatcatatgagacaacttatgtgacaatttcttttttctctcttttcattggtc 51717244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 55268027 - 55268072
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  55268027 gttgtacaaaagttgtcacaaattgg-ttgtacaaatatcatttctc 55268072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 503
Target Start/End: Complemental strand, 1796410 - 1796366
Alignment:
Q  458 ttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  1796410 ttgtacaaaagttgtcacaaattggtt-gtacaaatatcatttctc 1796366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 4896387 - 4896460
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||| | | || | |||||| |||||||||| |   ||||||||||||| |||||||    
T  4896387 aagagtagtgatatttgaacatctatttgaaacaacttttgtgacaacctcttttttctctcttttcattggtc 4896460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 503
Target Start/End: Original strand, 7037511 - 7037555
Alignment:
Q  458 ttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  7037511 ttgtacaaaagttgtcacaaattggtt-gtacaaatatcatttctc 7037555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 25523083 - 25523156
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||| ||||||||||||||  | |||||||| |||||| |||||   || |||||||||| |||||||    
T  25523083 aagagtagtgttatttgaacaaccatatgagacaacttttgtgataacttattttctctctcttttcattggtc 25523156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 33438221 - 33438156
Alignment:
Q  328 tgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||| |||||||| ||   |||||| || ||| ||| |||||||||||||||||||||||||    
T  33438221 tgatatttaaacaaccatttggtacaacttttttgataaccttcattttctctctttttattggtc 33438156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 36444282 - 36444355
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||| ||  | | |||| | ||||||||||||  ||||||||| |||| |||||||    
T  36444282 aagagtagtgatatttgaacaatcatatgatacaattcttgtgacaacttctattttctcttttttcattggtc 36444355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 503
Target Start/End: Original strand, 51359821 - 51359861
Alignment:
Q  462 acaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  51359821 acaaaagttgtcacaaaatggtt-gtacaaatatcatttctc 51359861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 504
Target Start/End: Original strand, 169535 - 169574
Alignment:
Q  464 aaaagttgtaacaaaatggtttgtacaaatatcatttctcg 504  Q
    ||||||||| ||||||||||| |||||||||||||||||||    
T  169535 aaaagttgtcacaaaatggtt-gtacaaatatcatttctcg 169574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 463 - 503
Target Start/End: Complemental strand, 8810610 - 8810571
Alignment:
Q  463 caaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||| ||||||||| ||||||||||||||||||    
T  8810610 caaaagttgtaagaaaatggtt-gtacaaatatcatttctc 8810571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 325 - 393
Target Start/End: Complemental strand, 17363409 - 17363341
Alignment:
Q  325 tagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||| | ||||| || | |||||| |  ||||||||||||||| ||||||||| |||||||    
T  17363409 tagtgatatttgtaaaaccattttatacaactttgatgacaactttcatttgctctcttttcattggtc 17363341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 22257084 - 22257155
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactatt-gtgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||||||||| || | |||||| || |||||||||||  || |||||||||| ||||||    
T  22257084 agagtagtgatatttgaacaaccatttcatacaacttttggtgacaacttt-tttctctctcttttcattggt 22257155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 36728505 - 36728581
Alignment:
Q  317 acaaagagtagtgatatttgaacaaccaattaa-gacaactattgtgacaactttcattttctctctttttattggt 392  Q
    ||||||| |||||||||||  ||| |||||| | ||||||| | |||||||||||  ||||||||||| ||||||||    
T  36728505 acaaagaatagtgatatttacacatccaattgatgacaactttggtgacaactttgtttttctctcttcttattggt 36728581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 361 - 393
Target Start/End: Complemental strand, 40308576 - 40308544
Alignment:
Q  361 tgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||| |||||||||||||||||||    
T  40308576 tgacaactttcatgttctctctttttattggtc 40308544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 501
Target Start/End: Original strand, 43307395 - 43307438
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttc 501  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||    
T  43307395 gttgtacaaaagttgtacaaaaatgg-ttgtacaaatatcatttc 43307438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 48099993 - 48099922
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactatt-gtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||| |||||||| || | |||||| || |||||||||||  |||| |||||||||||||||    
T  48099993 agagtagtgatatttaaacaaccatttcatacaacttttggtgacaacttt-tttttttctctttttattggt 48099922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 351 - 390
Target Start/End: Original strand, 51397775 - 51397815
Alignment:
Q  351 acaactat-tgtgacaactttcattttctctctttttattg 390  Q
    |||||||| ||||||||||||||||||||||||||| ||||    
T  51397775 acaactatatgtgacaactttcattttctctcttttcattg 51397815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 24431507 - 24431577
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||   ||||||||||||| ||||||    
T  24431507 gagtagtgatatttgaacaaccatttgagacaactattgtgacaacttcatttttctctcttttcattggt 24431577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 20719902 - 20719975
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||| ||| || |||||||| ||||||||||||   || |||||||||| |||||||    
T  20719902 aagagtagtgatatttgaacatccatttgagacaacttttgtgacaacttcttttctctctcttttcattggtc 20719975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 322 - 393
Target Start/End: Original strand, 3722965 - 3723036
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||| |||||| || ||||||| ||  ||||||| |  |||||||||||||||||||||||||||||||||    
T  3722965 gagtaatgatatatgtacaaccatttgggacaactttgatgacaactttcattttctctctttttattggtc 3723036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 39595456 - 39595385
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||| ||||||||||||||||| || | |||||| ||||||||||||   ||||||||||||| |||||||    
T  39595456 gagtaatgatatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcattggtc 39595385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 393
Target Start/End: Complemental strand, 125273 - 125203
Alignment:
Q  323 agtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||| || | |||||| ||| ||||||||   ||||||||||||| |||||||    
T  125273 agtagtgatatttgaacaaccatttgatacaacttttgcgacaacttcttttttctctcttttcattggtc 125203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 33567125 - 33567199
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||| |||||||||| || | |||||| ||||||||| ||   ||||||||||||| |||||||    
T  33567125 aaagagtagtgatatatgaacaaccatttgatacaacttttgtgacaatttcttttttctctcttttcattggtc 33567199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 2117526 - 2117599
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||||||||| | || | |||||| ||||||||||||   |||||||| |||| ||||||    
T  2117526 aaagagtagtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctcttttttcattggt 2117599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 33243627 - 33243700
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    |||||||| ||||||||||||||||| || ||| |||| ||||||||| ||   ||||||||||||| ||||||    
T  33243627 aaagagtaatgatatttgaacaaccatttcagataacttttgtgacaatttattttttctctcttttcattggt 33243700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 40566104 - 40566177
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaac-tttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||| ||| || |||||||| || | ||||| ||| |||||||||||||| |||||||    
T  40566104 agagtagtgatatttgaacatccatttgagacaacttttttaacaactttttattttctctcttttcattggtc 40566177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 504
Target Start/End: Original strand, 7077375 - 7077414
Alignment:
Q  464 aaaagttgtaacaaaatggtttgtacaaatatcatttctcg 504  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  7077375 aaaagttgtaacaaaatgg-ttgtacaaatatcatttctcg 7077414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 386
Target Start/End: Original strand, 9714024 - 9714088
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctcttttt 386  Q
    |||||||||||||||||||||||  | | |||||| ||||||||||||  ||||||| |||||||    
T  9714024 gagtagtgatatttgaacaaccatatgatacaactcttgtgacaacttctattttctatcttttt 9714088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 320 - 392
Target Start/End: Original strand, 11767877 - 11767949
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||||||||||||| || |||||||| |||  |||||||   ||||||| ||||| ||||||    
T  11767877 aagagtagtgatatttgaacaaccattttagacaacttttggtacaacttcttttttctcacttttcattggt 11767949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 19376020 - 19376092
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||| |||||||||||| || | ||||||||  |||||||||||   ||||||||||||| |||||||    
T  19376020 agagtagtgttatttgaacaactaaatgagacaacttatgtgacaacttcttttttctctcttttcattggtc 19376092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 27392590 - 27392662
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||| ||||||||||||||  | |||||||| ||||||||||||   |||| |||||||| |||||||    
T  27392590 agagtagtgttatttgaacaaccatatgagacaacttttgtgacaacttattttttttctcttttcattggtc 27392662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 392
Target Start/End: Complemental strand, 3141678 - 3141608
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattg-tgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||||||||||| || | |||||| ||| ||||||||||  ||||||||||||| ||||||    
T  3141678 gagtagtgatatttgaacaaccatttcatacaacttttgatgacaacttt-tttttctctcttttcattggt 3141608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 3155184 - 3155113
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||| |||| ||  || ||||||| |  |||||||||||||||||||| || |||||||||    
T  3155184 gagtagtgatatttgtacaatcatatatgacaactttaatgacaactttcattttctctattcttattggtc 3155113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 500
Target Start/End: Complemental strand, 5005148 - 5005105
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcattt 500  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||    
T  5005148 gttgtacaaatgttgtaccaaaatggtttgtgcaaatatcattt 5005105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 8959346 - 8959271
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaa-gacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||| ||| |||||| | ||||||| | | |||||| ||  |||||||||||||||||||||    
T  8959346 aaagagtagtgatatttgtacatccaattgatgacaactttggcgacaaccttgtttttctctctttttattggtc 8959271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 11306879 - 11306808
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||||||| | || | |||||| ||| ||||||||   ||||||||||||| ||||||    
T  11306879 agagtagtgatatttgaacaactatttgatacaacttttgagacaacttcttttttctctcttttcattggt 11306808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 1108026 - 1107981
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||||||||| | | ||||||||||||||||||    
T  1108026 gttgtacaaaagttgtaacaaaatag-tcgtacaaatatcatttctc 1107981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 3031879 - 3031834
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  3031879 gttgtacaaaagttgtacaaaaatggtt-gtacaaatatcatttctc 3031834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 369
Target Start/End: Complemental strand, 9403698 - 9403648
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactt 369  Q
    ||||||||||||||||| |||||||| || | |||||| ||||||||||||    
T  9403698 aaagagtagtgatatttaaacaaccatttgatacaacttttgtgacaactt 9403648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 9594523 - 9594478
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  9594523 gttgtacaaaagttgtcacaaattggtt-gtacaaatatcatttctc 9594478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 9599754 - 9599799
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  9599754 gttgtacaaaagttgtcacaaattgg-ttgtacaaatatcatttctc 9599799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 14914417 - 14914372
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||||    
T  14914417 gttgtccaaaagttgtcacaaaatggtt-gtacaaatatcatttctc 14914372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 18729315 - 18729360
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||||    
T  18729315 gttgtacaaaagttgtacaaaaatgg-ttgtacaaatatcatttctc 18729360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 369
Target Start/End: Complemental strand, 19127309 - 19127259
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactt 369  Q
    |||||||||||||||||||||||||| || | |||||| ||| ||||||||    
T  19127309 aaagagtagtgatatttgaacaaccattttaaacaacttttgcgacaactt 19127259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 28501637 - 28501592
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||||||    
T  28501637 gttgtacaaaaattgtcacaaaatggtt-gtacaaatatcatttctc 28501592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 29402367 - 29402293
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||| ||||| ||||||||||||  | ||||||||  |||||||||||   |||||| ||||||||||||||    
T  29402367 aaagagtggtgatgtttgaacaaccatgtgagacaacttatgtgacaacttcttttttctttctttttattggtc 29402293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 29765875 - 29765830
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  29765875 gttgtacaaaagttgtactaaaatggtt-gtacaaatatcatttctc 29765830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 30574403 - 30574448
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  30574403 gttgtacaaaagttgtcacaaattgg-ttgtacaaatatcatttctc 30574448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 39032630 - 39032675
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||||    
T  39032630 gttgtacaaaagttgtacaaaaatgg-ttgtacaaatatcatttctc 39032675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 503
Target Start/End: Original strand, 3263535 - 3263579
Alignment:
Q  458 ttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  3263535 ttgtacaaaagttgtcacaaattggtt-gtacaaatatcatttctc 3263579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 7144751 - 7144686
Alignment:
Q  328 tgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||| |||||| || | |||||  || ||||||| ||| |||||||||||||||||||||    
T  7144751 tgatatttgagcaaccatttgatacaacctttttgacaaccttctttttctctctttttattggtc 7144686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 18638728 - 18638801
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||| || ||||||| ||  ||||||| |  |||||||||| ||||||||| || |||||||||    
T  18638728 aagagtagtgatatatgtacaaccatttgggacaactttgatgacaacttttattttctcttttcttattggtc 18638801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 503
Target Start/End: Complemental strand, 18695358 - 18695318
Alignment:
Q  462 acaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  18695358 acaaaagttgttacaaaatggtt-gtacaaatatcatttctc 18695318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 503
Target Start/End: Original strand, 25585483 - 25585527
Alignment:
Q  458 ttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||||    
T  25585483 ttgtacaaaagttgtacaaaaatggtt-gtacaaatatcatttctc 25585527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 318 - 393
Target Start/End: Complemental strand, 17489535 - 17489459
Alignment:
Q  318 caaagagtagtgatatttgaacaaccaatt-aagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||| ||| |||||| | ||||||| | |||||||  ||  ||||||||||| |||||||||    
T  17489535 caaagagtagtgatatttgtacatccaattgatgacaactttggtgacaatcttgtttttctctcttcttattggtc 17489459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 361 - 393
Target Start/End: Complemental strand, 27341012 - 27340980
Alignment:
Q  361 tgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||| |||||||||||||||||    
T  27341012 tgacaactttcatttgctctctttttattggtc 27340980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 463 - 503
Target Start/End: Original strand, 42225798 - 42225837
Alignment:
Q  463 caaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  42225798 caaaagttgttacaaaatggttt-tacaaatatcatttctc 42225837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 361 - 393
Target Start/End: Complemental strand, 42807451 - 42807419
Alignment:
Q  361 tgacaactttcattttctctctttttattggtc 393  Q
    |||||||||| ||||||||||||||||||||||    
T  42807451 tgacaacttttattttctctctttttattggtc 42807419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 7e-17; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 80 - 207
Target Start/End: Complemental strand, 43790717 - 43790588
Alignment:
Q  80 gaacttgcaatttggatcctaactaataaatatatataatcatcaaacctgattcaaaaaactaaacaannnnnnnagggtct--aatagacccctaaaa 177  Q
    |||||| |||||||| ||||||||||||||||||||||| |||||||  |||| |||||||||||||||       |||||||   ||||||||||||||    
T  43790717 gaacttacaatttgggtcctaactaataaatatatataaacatcaaatttgatacaaaaaactaaacaattttcttagggtctgatatagacccctaaaa 43790618  T
Q  178 agaaattttgaggcccaaatttcgtactta 207  Q
    |  | ||| |||||| ||||||| ||||||    
T  43790617 aatattttggaggcctaaatttcctactta 43790588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 322 - 393
Target Start/End: Original strand, 28300535 - 28300606
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||||  | | |||||| ||||||||||||| |||||||||||||| |||||||    
T  28300535 gagtagtgatatttgaacaaccatatgatacaactcttgtgacaacttttattttctctcttttcattggtc 28300606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 9107100 - 9107190
Alignment:
Q  89 atttggatcctaactaataaatatatataatcatcaaacctgattcaaaaaactaaacaa-nnnnnnnagggtctaatagacccctaaaaa 178  Q
    ||||||||| |||||||||||||||||||| |||||||   ||| |||||||||||||||        |||||||||||||||||||||||    
T  9107100 atttggatcataactaataaatatatataaacatcaaattcgatacaaaaaactaaacaactttttttagggtctaatagacccctaaaaa 9107190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 20380776 - 20380849
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||||| || | |||||| ||||||||||||   ||||||| ||||| |||||||    
T  20380776 aagagtagtgatatttgaacaaccattttaaacaacttttgtgacaacttcttttttctcacttttcattggtc 20380849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 7231894 - 7231966
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||||| || | |||||| ||||||||| ||   ||||||||||||| |||||||    
T  7231894 agagtagtgatatttgaacaaccatttgatacaacttttgtgacaatttattttttctctcttttcattggtc 7231966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 318 - 393
Target Start/End: Complemental strand, 22154050 - 22153975
Alignment:
Q  318 caaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||| ||||||| ||   |||||| |  ||||||||||||||| ||||||||| |||||||    
T  22154050 caaagagtagtgatatttgtacaaccatttggtacaactttaatgacaactttcatttgctctcttttcattggtc 22153975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 25959428 - 25959502
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaac-tattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||| | ||||||||||||||||| || | ||||| |||| ||||||||||||||||||||||||| |||||||    
T  25959428 aaagagcaatgatatttgaacaaccatttgatacaacctatt-tgacaactttcattttctctcttttcattggtc 25959502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 319 - 389
Target Start/End: Complemental strand, 31997988 - 31997917
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattg-tgacaactttcattttctctctttttatt 389  Q
    |||||||||||||||||||||||||| || |||||||| ||| |||||||||   || ||||||||||||||    
T  31997988 aaagagtagtgatatttgaacaaccatttgagacaacttttgatgacaacttcttttctctctctttttatt 31997917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 322 - 393
Target Start/End: Original strand, 42475866 - 42475937
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||| ||||||||||||||  |||||||||| |||||| |||||   ||||||||||||| |||||||    
T  42475866 gagtagtgttatttgaacaaccatataagacaacttttgtgaaaacttattttttctctcttttcattggtc 42475937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 11173635 - 11173561
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||| | ||||||||||||||| || | |||||| ||||||||||||   ||||||||||||| |||||||    
T  11173635 aaagagtaataatatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcattggtc 11173561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 11327153 - 11327108
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||    
T  11327153 gttgtacaaaagttgtcacaaaatgg-ttgtacaaatatcatttctc 11327108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 393
Target Start/End: Complemental strand, 26669021 - 26668951
Alignment:
Q  323 agtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||| || ||||||| ||| |||||||||  |||||||||||||||||||  |||| |||||||    
T  26669021 agtagtgatatatgtacaaccatttaggacaactatgatgacaactttcattttctcatttttcattggtc 26668951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 392
Target Start/End: Complemental strand, 29706085 - 29706015
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||||||||| | || | |||||| ||||||||||||   ||||||||||||| ||||||    
T  29706085 gagtagtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggt 29706015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 32796012 - 32795947
Alignment:
Q  328 tgatatttgaacaaccaattaagacaac-tattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||| ||   ||||| |||| |||||||||||||||||||||||||||||||||    
T  32796012 tgatatttgaacaaccatttggtacaacctatt-tgacaactttcattttctctctttttattggtc 32795947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 54233494 - 54233539
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  54233494 gttgtacaaaagttgtaaaaaaatgg-ttgtacaaatatcatttctc 54233539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 43169642 - 43169712
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactatt-gtgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||||||||| || | |||||| || |||||||||||  ||||||||||||| ||||||    
T  43169642 agagtagtgatatttgaacaaccatttcatacaacttttggtgacaacttt--ttttctctcttttcattggt 43169712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 393
Target Start/End: Complemental strand, 46473312 - 46473239
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||| ||||||||||||||||| || | |||||| || |||||||||   ||||||||||||| |||||||    
T  46473312 aagagtaatgatatttgaacaaccatttgatacaacttttatgacaacttcttttttctctcttttcattggtc 46473239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 35272210 - 35272138
Alignment:
Q  322 gagtagtgatatttgaacaac-caattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||  || || ||||||||  |||||||||||   |||||||||||||||||||||    
T  35272210 gagtagtgatatttgaacaattcattttagacaacttatgtgacaacttcttttttctctctttttattggtc 35272138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 393
Target Start/End: Original strand, 19418049 - 19418120
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||| |||||||||||||| ||| || |||||||| ||||||||||||   || |||||||||| |||||||    
T  19418049 gagtggtgatatttgaacatccatttgagacaactcttgtgacaacttcttttctctctcttttcattggtc 19418120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 501
Target Start/End: Complemental strand, 38471686 - 38471644
Alignment:
Q  458 ttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttc 501  Q
    |||||||||||||||| |||||||| ||||||||||||||||||    
T  38471686 ttgtacaaaagttgtaccaaaatgg-ttgtacaaatatcatttc 38471644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 44910890 - 44910815
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaa-gacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||| |||||||||||||| |  |||  ||||| | |||||||||||| ||||||||||||| |||||||||    
T  44910890 aaagagtaatgatatttgaacaatcttttagtgacaatttttgtgacaacttacattttctctcttcttattggtc 44910815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 318 - 393
Target Start/End: Original strand, 46092844 - 46092919
Alignment:
Q  318 caaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||||||| ||   |||| |||  | ||||||||  ||| |||||||||||||||||    
T  46092844 caaagagtagtgatatttgaacaaccattttttacaattatcattacaacttttttttcctctctttttattggtc 46092919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 2280222 - 2280177
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  2280222 gttgtacaaaagttgtactaaaatggtt-gtacaaatatcatttctc 2280177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 8254072 - 8254027
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  8254072 gttgtaccaaagttgtcacaaaatggtt-gtacaaatatcatttctc 8254027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 14839071 - 14839116
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||||    
T  14839071 gttgtacaaaagttgtacaaaaatgg-ttgtacaaatatcatttctc 14839116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 16295509 - 16295464
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  16295509 gttgtacaaaagttgtatcaaattggtt-gtacaaatatcatttctc 16295464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 32931944 - 32931989
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  32931944 gttgtacaaaagttgtcacaaattgg-ttgtacaaatatcatttctc 32931989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 36819001 - 36818956
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  36819001 gttgtacaaaagttgtcacaaattggtt-gtacaaatatcatttctc 36818956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 393
Target Start/End: Original strand, 37215129 - 37215191
Alignment:
Q  331 tatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||  | |||||||| ||||||||||||   ||||||||||||| |||||||    
T  37215129 tatttgaacaaccatatgagacaacttttgtgacaacttattttttctctcttttcattggtc 37215191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 503
Target Start/End: Complemental strand, 48405451 - 48405410
Alignment:
Q  461 tacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  48405451 tacaaaagttgtcacaaaatggtt-gtacaaatatcatttctc 48405410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 55344181 - 55344255
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaac-tattgtgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||||||||| | || | ||||| | || ||||||||||  ||||||||||||| ||||||    
T  55344181 aaagagtagtgatatttgaacaactatttcatacaacattttatgacaacttttcttttctctcttttcattggt 55344255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 23906874 - 23906947
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaa-gacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||| ||| |||||| | ||||||| | |||||||| ||  ||||||||||| |||||||||    
T  23906874 agagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctctcttcttattggtc 23906947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 503
Target Start/End: Original strand, 29573387 - 29573427
Alignment:
Q  462 acaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  29573387 acaaaagttgttacaaaatggtt-gtacaaatatcatttctc 29573427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 502
Target Start/End: Complemental strand, 44689837 - 44689793
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttct 502  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||    
T  44689837 gttgtacaaaagttgtacaaaaatgg-ttgtacaaatatcatttct 44689793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 503
Target Start/End: Original strand, 48944737 - 48944781
Alignment:
Q  458 ttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||||    
T  48944737 ttgtacaaaagttgttagaaaatggtt-gtacaaatatcatttctc 48944781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 322 - 389
Target Start/End: Complemental strand, 1208128 - 1208060
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaa-gacaactattgtgacaactttcattttctctctttttatt 389  Q
    ||||||||||||||| ||| |||||| | | ||||| | ||||||||||| |||||||||||| |||||    
T  1208128 gagtagtgatatttgtacatccaattgatgtcaactttggtgacaactttgattttctctcttcttatt 1208060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 6126638 - 6126566
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactatt-gtgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||||||||| || | |||||| || || |||||||   ||||||||||||| ||||||    
T  6126638 agagtagtgatatttgaacaaccatttcatacaacttttggttacaacttcttttttctctcttttcattggt 6126566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 369
Target Start/End: Original strand, 7293987 - 7294035
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactt 369  Q
    |||||||||||||||||||||||| || |||||||| |||  |||||||    
T  7293987 agagtagtgatatttgaacaaccattttagacaacttttgatacaactt 7294035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 391
Target Start/End: Original strand, 24551113 - 24551185
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattgg 391  Q
    ||||||||||| ||||||||||| ||| | |||||| |  |||||||||||   ||||||||||||| |||||    
T  24551113 aaagagtagtgttatttgaacaatcaaatgagacaatttatgtgacaacttcttttttctctcttttcattgg 24551185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 391
Target Start/End: Complemental strand, 30839638 - 30839570
Alignment:
Q  323 agtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattgg 391  Q
    ||||||||||||| ||||| ||  | | |||||| ||||||||||||  |||||||||||||| |||||    
T  30839638 agtagtgatatttaaacaatcatatgatacaactcttgtgacaacttctattttctctcttttcattgg 30839570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 33007543 - 33007471
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactt-tcattttctctctttttattggtc 393  Q
    |||||||| ||||||||||||||  | |||||| | |||||||||||| |  ||||||||||||| |||||||    
T  33007543 gagtagtgttatttgaacaaccatatgagacaatttttgtgacaacttctttttttctctcttttcattggtc 33007471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 41111960 - 41112032
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||| ||| || |||||||| || | |||||||   || |||||||||| |||||||    
T  41111960 agagtagtgatatttgaacatccatttgagacaacttttttaacaacttcttttctctctcttttcattggtc 41112032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 462 - 502
Target Start/End: Complemental strand, 47101562 - 47101523
Alignment:
Q  462 acaaaagttgtaacaaaatggtttgtacaaatatcatttct 502  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  47101562 acaaaagttgtcacaaaatggtt-gtacaaatatcatttct 47101523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 51673046 - 51672998
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactt 369  Q
    |||||||||||||||||||||||| || |||||||| |||  |||||||    
T  51673046 agagtagtgatatttgaacaaccattttagacaacttttggtacaactt 51672998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 322 - 393
Target Start/End: Original strand, 54233389 - 54233461
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaa-gacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||| ||| |||||| | ||||||| | |||||||| ||  ||||||||||| |||||||||    
T  54233389 gagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtc 54233461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 80 - 207
Target Start/End: Original strand, 3412149 - 3412277
Alignment:
Q  80 gaacttgcaatttggatcctaactaataaatatatataatcatcaaacctgattc--aaaaaactaaacaannnnnnnagggtctaatagacccctaaaa 177  Q
    |||| |||||||||| | ||||| ||||||||||||||| ||||||||||||| |  ||||||||||||||       || | ||| |||||||||||||    
T  3412149 gaacctgcaatttgggttctaacaaataaatatatataaacatcaaacctgatacaaaaaaaactaaacaa-ttttttagtgcctattagacccctaaaa 3412247  T
Q  178 agaaattttgaggcccaaatttcgtactta 207  Q
    |||||||||| ||||||||||  |||||||    
T  3412248 agaaattttggggcccaaattctgtactta 3412277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 30275315 - 30275372
Alignment:
Q  87 caatttggatcctaactaataaatatatataatcatcaaacctgattcaaaaaactaa 144  Q
    |||||||||| ||||||||||||||||||||| |||||||| |||| |||||||||||    
T  30275315 caatttggattctaactaataaatatatataaacatcaaacttgatacaaaaaactaa 30275372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 317 - 393
Target Start/End: Complemental strand, 12142071 - 12141995
Alignment:
Q  317 acaaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||| ||||||||||||||||||||||| || | |||||| |||||||||||||  |||||| |||||| |||||||    
T  12142071 acaatgagtagtgatatttgaacaaccatttgatacaacttttgtgacaactttttttttctttcttttcattggtc 12141995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 5978761 - 5978690
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||||  | | |||||| ||||||||||||  |||||||||||||| |||||||    
T  5978761 gagtagtgatatttgaacaaccatatgatacaactcttgtgacaacttctattttctctcttttcattggtc 5978690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 46651857 - 46651783
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||||||  | | |||| | ||||||||||||  |||||||||||||| |||||||    
T  46651857 aaagagtagtgatatttgaacaaccatatgatacaattcttgtgacaacttctattttctctcttttcattggtc 46651783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 47945028 - 47944982
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  47945028 gttgtacaaaagttgtacaaaaatggtttgtacaaatatcatttctc 47944982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 47950458 - 47950412
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  47950458 gttgtacaaaagttgtacaaaaatggtttgtacaaatatcatttctc 47950412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 322 - 369
Target Start/End: Complemental strand, 10591334 - 10591287
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactt 369  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||    
T  10591334 gagtagtgatatttgaacaaccatttgagacaacttttgtgacaactt 10591287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 28824685 - 28824614
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||| ||||||||||||||| | ||||||||  ||||||||||||  ||| ||||||||| |||||||    
T  28824685 gagtagtgttatttgaacaaccaaatgagacaacttatgtgacaacttttgtttcctctcttttcattggtc 28824614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 40717127 - 40717198
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaac-tattgtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||||||||||| || | ||||| | ||||||||||||   ||||||||||||||||||||    
T  40717127 gagtagtgatatttgaacaaccatttcatacaactttttgtgacaacttcttttttctctctttttattggt 40717198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 33050228 - 33050183
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||    
T  33050228 gttgtacaaaagttgtcacaaaatgg-ttgtacaaatatcatttctc 33050183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 145
Target Start/End: Original strand, 36683940 - 36683998
Alignment:
Q  87 caatttggatcctaactaataaatatatataatcatcaaacctgattcaaaaaactaaa 145  Q
    |||||||| ||||||||||||||| |||||||  ||||||| |||| ||||||||||||    
T  36683940 caatttgggtcctaactaataaatttatataaatatcaaacttgatacaaaaaactaaa 36683998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 10014842 - 10014915
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaa-gacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||| ||| |||||| | ||||||| | ||||||| |||  |||||||||||||||||||||    
T  10014842 agagtagtgatatttgtacatccaattgatgacaactttggtgacaattttgtttttctctctttttattggtc 10014915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 37351877 - 37351950
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||| || || | | |||| ||||||||| ||   |||||||||||||||||||||    
T  37351877 aagagtagtgatatttgaacaatcatttgatataacttttgtgacaatttcttttttctctctttttattggtc 37351950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 385
Target Start/End: Original strand, 8792486 - 8792549
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttt 385  Q
    |||||||| ||||||||||||||||| || | |||||| ||||||||||||   |||||||||||||    
T  8792486 aaagagtaatgatatttgaacaaccatttgatacaacttttgtgacaactt---ttttctctctttt 8792549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 17500880 - 17500808
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||| || ||||||| ||  ||||||| |  ||| ||||||||||||||||||| |||||||||    
T  17500880 agagtagtgatatatgtacaaccatttgggacaactttgatgataactttcattttctctcttcttattggtc 17500808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 17552334 - 17552406
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||| || ||||||| ||  ||||||| |  ||| ||||||||||||||||||| |||||||||    
T  17552334 agagtagtgatatatgtacaaccatttgggacaactttgatgataactttcattttctctcttcttattggtc 17552406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 29355516 - 29355480
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaact 356  Q
    ||||||||||||||||||||||||| |||||||||||    
T  29355516 aagagtagtgatatttgaacaaccatttaagacaact 29355480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 7807240 - 7807168
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattg-tgacaactttcattttctctctttttattggt 392  Q
    |||||||||||||||||||||||||| || | |||||| ||| |||||||||   ||||||||||||| ||||||    
T  7807240 aaagagtagtgatatttgaacaaccatttcatacaacttttgatgacaactt--cttttctctcttttcattggt 7807168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 25887765 - 25887694
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||| || |||||||| |||  |||||||   ||||||| ||||| |||||||    
T  25887765 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttcttttttctcacttttcattggtc 25887694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 2347085 - 2347130
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||    
T  2347085 gttgtaccaaagttgtcacaaaatgg-ttgtacaaatatcatttctc 2347130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 2600560 - 2600605
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||||    
T  2600560 gttgtacaaaagttgtactaaaatgg-ttgtacaaatatcatttctc 2600605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 4971335 - 4971290
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  4971335 gttgtataaaagttgtcacaaaatggtt-gtacaaatatcatttctc 4971290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 323 - 393
Target Start/End: Complemental strand, 5724219 - 5724149
Alignment:
Q  323 agtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||| || ||||||| ||||||||| |    |||||||||| |||||||||||||| |||||||    
T  5724219 agtagtgatatatgtacaaccatttaagacaaattggatgacaacttttattttctctcttttcattggtc 5724149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 9031383 - 9031318
Alignment:
Q  328 tgatatttgaacaaccaattaagacaa-ctattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||| ||   |||| ||||| ||||||| |||||||||||||||||||||||||    
T  9031383 tgatatttgaacaaccatttggtacaatctatt-tgacaaccttcattttctctctttttattggtc 9031318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 11789717 - 11789762
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||||    
T  11789717 gttgtacaaaagttgtactaaaatgg-ttgtacaaatatcatttctc 11789762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 12102610 - 12102668
Alignment:
Q  334 ttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||| || |||||||| ||||||||||||   ||||||||||||| ||||||    
T  12102610 ttgaacaaccatttcagacaacttttgtgacaacttattttttctctcttttcattggt 12102668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 320 - 390
Target Start/End: Original strand, 19510244 - 19510314
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattg 390  Q
    |||||||||| ||||||||||| ||  |||||||||| |||| |||||||   ||||||||||||| ||||    
T  19510244 aagagtagtgttatttgaacaatcatataagacaacttttgtaacaacttattttttctctcttttcattg 19510314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 28548247 - 28548292
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||||||| |||||| | ||||||||||||||||||||    
T  28548247 gttgtacaaaagttgtaccaaaatag-ttgtacaaatatcatttctc 28548292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 29763875 - 29763830
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||||    
T  29763875 gttgtacaaaagttatcacaaaatggtt-gtacaaatatcatttctc 29763830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 30538671 - 30538626
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  30538671 gttgtacaaaagttgtaccaaaattgtt-gtacaaatatcatttctc 30538626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 30864443 - 30864488
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  30864443 gttgtacaaaagttgtcacaaattgg-ttgtacaaatatcatttctc 30864488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 37969976 - 37969931
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  37969976 gttgtacaaaagttgtatcaaaatagtt-gtacaaatatcatttctc 37969931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 43445592 - 43445518
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||| || || | |||| | ||||||||| ||   |||||| ||||||||||||||    
T  43445592 aaagagtagtgatatttgaacaatcatttgatacaatttttgtgacaatttcttttttctttctttttattggtc 43445518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 44511184 - 44511139
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||||    
T  44511184 gttgtacaaaagttgtcacaaaatgg-ttgtacgaatatcatttctc 44511139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 48639409 - 48639454
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||||    
T  48639409 gttgtacaaaagttgtacaaaaatgg-ttgtacaaatatcatttctc 48639454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 369
Target Start/End: Original strand, 155868 - 155917
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactt 369  Q
    ||||||||||||||||||||||||| || |||||||| |||  |||||||    
T  155868 aagagtagtgatatttgaacaaccattttagacaacttttgatacaactt 155917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 2790360 - 2790288
Alignment:
Q  322 gagtagtgatatttgaacaac-caattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||| || || ||||||||  |||||||||||   || |||||||||| |||||||    
T  2790360 gagtagtgatatttgaacaactcattttagacaacttatgtgacaacttcttttctctctcttttcattggtc 2790288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 390
Target Start/End: Complemental strand, 8742569 - 8742497
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaatt-aagacaactattgtgacaactttcattttctctctttttattg 390  Q
    |||||||||||||||||| ||| |||||| | ||||||| | |||||||| ||  ||||||||||| ||||||    
T  8742569 aaagagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattg 8742497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 458 - 502
Target Start/End: Original strand, 37325846 - 37325889
Alignment:
Q  458 ttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttct 502  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||    
T  37325846 ttgtacaaaagttgtcacaaattgg-ttgtacaaatatcatttct 37325889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.000000000001; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 16336956 - 16337030
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||| ||||||||||||| ||| || |||||||| ||||||||||||  ||| |||||||||| |||||||    
T  16336956 aaagagtaatgatatttgaacatccatttgagacaactcttgtgacaacttctattctctctcttttcattggtc 16337030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 320 - 392
Target Start/End: Original strand, 31517067 - 31517139
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    |||||||||| |||||||||||| || | ||||||||  |||||||||||   ||||||||||||||||||||    
T  31517067 aagagtagtgttatttgaacaactaaatgagacaacttatgtgacaacttcttttttctctctttttattggt 31517139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 30733191 - 30733120
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||| |||||||| || |||||||| ||||||||| |||  | |||||| ||||||||||||    
T  30733191 gagtagtgatatttaaacaaccatttgagacaacttttgtgacaatttttttgttctctttttttattggtc 30733120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 393
Target Start/End: Complemental strand, 2340579 - 2340509
Alignment:
Q  323 agtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||| ||||| || || |||||||| |||| | || |||| |||||||||||||||||||||    
T  2340579 agtagtgatatttaaacaatcatttgagacaacttttgtaataattttctttttctctctttttattggtc 2340509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 3339525 - 3339570
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||    
T  3339525 gttgtacaaaagttgtcacaaaatgg-ttgtacaaatatcatttctc 3339570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 11785541 - 11785468
Alignment:
Q  321 agagtagtgatatttgaacaac-caattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||| || || ||||||||  |||||||||||   |||||||| ||||||||||||    
T  11785541 agagtagtgatatttgaacaactcattttagacaacttatgtgacaacttgttttttctctttttttattggtc 11785468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 320 - 392
Target Start/End: Original strand, 31480723 - 31480795
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    |||||||||| |||||||||||| || | |||||| |  |||||||||||   ||||||||||||||||||||    
T  31480723 aagagtagtgttatttgaacaactaaatgagacaatttatgtgacaacttcttttttctctctttttattggt 31480795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 1804055 - 1803980
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaatt-aagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||| ||| |||||| | ||||||| | |||||||| ||  ||||||||||| |||||||||    
T  1804055 aaagagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtc 1803980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 318 - 393
Target Start/End: Complemental strand, 1897872 - 1897797
Alignment:
Q  318 caaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||| | | || | |||||| |||||||||| |   ||||||||||||| |||||||    
T  1897872 caaagagtagtgatatttgaacatctatttgaaacaacttttgtgacaacctcttttttctctcttttcattggtc 1897797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 503
Target Start/End: Original strand, 28965873 - 28965911
Alignment:
Q  464 aaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  28965873 aaaagttgtaacaaaatgg-ttgtacaaatatcatttctc 28965911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 7693500 - 7693426
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||| || ||||||| ||  ||||||| |  |||||| ||| |||||||||||| |||||||||    
T  7693500 aaagagtagtgatatatgtacaaccatttgggacaactttgatgacaatttttattttctctcttcttattggtc 7693426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 9954734 - 9954660
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactatt-gtgacaactttcattttctctctttttattggt 392  Q
    |||||| ||||||||||||||||||| |||| |||||| || ||||||||||    |||||||||||| ||||||    
T  9954734 aaagaggagtgatatttgaacaaccatttaatacaacttttggtgacaacttcttctttctctcttttcattggt 9954660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 17457619 - 17457577
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtg 362  Q
    |||||||||||||||||||||| ||||| |||||||| |||||    
T  17457619 aagagtagtgatatttgaacaatcaattgagacaacttttgtg 17457577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 323 - 393
Target Start/End: Complemental strand, 24752412 - 24752342
Alignment:
Q  323 agtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||| || |||||||| |||  |||||||   ||||||| ||||| |||||||    
T  24752412 agtagtgatatttgaacaaccattttagacaacttttggtacaacttcttttttctcacttttcattggtc 24752342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 29383742 - 29383668
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||| ||||||||||| ||| | |||||| |  |||||||||||   ||||||||||||| |||||||    
T  29383742 aaagagtagtgttatttgaacaagcaaatgagacaatttatgtgacaacttcttttttctctcttttcattggtc 29383668  T

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Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 30906549 - 30906622
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattt-tctctctttttattggt 392  Q
    |||||||||||||||||||||| ||| || | |||||| || |||||| |||| ||| |||||||||||||||||    
T  30906549 aaagagtagtgatatttgaacatccatttgaaacaactcttatgacaa-tttcttttctctctctttttattggt 30906622  T

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Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 34021058 - 34021132
Alignment:
Q  319 aaagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||| ||| || |||||||| || | |||||||   || |||||||||| |||||||    
T  34021058 aaagagtagtgatatttgaacatccatttgagacaacttttttaacaacttcttttctctctcttttcattggtc 34021132  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 22491917 - 22491989
Alignment:
Q  321 agagtagtgatatttgaacaac-caattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||||||||||| || || ||| ||||  ||||||||| ||| ||||||||||||| |||||||    
T  22491917 agagtagtgatatttgaacaactcattttagaaaacttatgtgacaac-ttctttttctctcttttgattggtc 22491989  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 503
Target Start/End: Original strand, 25127864 - 25127904
Alignment:
Q  462 acaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  25127864 acaaaagttgttacaaaatggtt-gtacaaatatcatttctc 25127904  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 504
Target Start/End: Complemental strand, 2056825 - 2056782
Alignment:
Q  460 gtacaaaagttgtaacaaaatggtttgtacaaatatcatttctcg 504  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||||    
T  2056825 gtacaaaagttgtcacaaattggtt-gtacaaatatcatttctcg 2056782  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 369
Target Start/End: Original strand, 26378273 - 26378321
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactt 369  Q
    |||||||||||||||||||||||| || |||||||| |||  |||||||    
T  26378273 agagtagtgatatttgaacaaccattttagacaacttttgatacaactt 26378321  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 30622207 - 30622135
Alignment:
Q  321 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||| || ||||| | ||  ||||||| |  |||||||||||||||| |||||| |||||||||    
T  30622207 agagtagtgatatatgtacaactatttgggacaactttgatgacaactttcattttttctcttcttattggtc 30622135  T

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Target: scaffold0148 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 9633 - 9562
Alignment:
Q  322 gagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||| |  | ||||| || | |||| ||||| |||||||||||||||||||||||    
T  9633 gagtagtgatatttgaacaactatatgagacagctttggtgataacttccattttctctctttttattggtc 9562  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 320 - 392
Target Start/End: Complemental strand, 18187 - 18116
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||||||||||| | || | |||||| || ||||||||||  ||||||||||||| ||||||    
T  18187 aagagtagtgatatttgaacaactatttgatacaacttttatgacaacttt-tttttctctcttttcattggt 18116  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 36193 - 36110
Alignment:
Q  313 tttaacaaagagtagtgatatttgaacaaccaattaagacaac-tattgtgacaact--ttcattttctctctttttattggtc 393  Q
    |||||| ||||||||||||||||||||||||| || | ||||| | |||||||||||  ||  ||||||||||||| |||||||    
T  36193 tttaacgaagagtagtgatatttgaacaaccatttgatacaactttttgtgacaacttgttttttttctctcttttcattggtc 36110  T

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Target: scaffold0651 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 4872 - 4917
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    ||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  4872 gttgtacaaaaattgtaccaaaatgg-ttgtacaaatatcatttctc 4917  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 145106 - 145061
Alignment:
Q  457 gttgtacaaaagttgtaacaaaatggtttgtacaaatatcatttctc 503  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  145106 gttgtacaaaagttgtacaaaaatggtt-gtacaaatatcatttctc 145061  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 505
Target Start/End: Original strand, 72202 - 72242
Alignment:
Q  464 aaaagttgtaacaaaatggtttgtacaaatatcatttctcga 505  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
T  72202 aaaagttgttacaaaatggtt-gtacaaatatcatttctcga 72242  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 393
Target Start/End: Complemental strand, 156090 - 156017
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtc 393  Q
    |||||||||||||| || ||||||| ||  ||||||| |  |||||||| |||||||||||||| | |||||||    
T  156090 aagagtagtgatatatgtacaaccatttgggacaactttgatgacaactctcattttctctcttctcattggtc 156017  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 361 - 393
Target Start/End: Original strand, 29738 - 29770
Alignment:
Q  361 tgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||||| |||||||    
T  29738 tgacaactttcattttctctcttttcattggtc 29770  T

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Target: scaffold0115 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 320 - 392
Target Start/End: Original strand, 15076 - 15147
Alignment:
Q  320 aagagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggt 392  Q
    ||||||||||||||||||||||| | ||   |||||| |||||||||| ||| |||||||| |||| ||||||    
T  15076 aagagtagtgatatttgaacaactatttggtacaacttttgtgacaac-ttctttttctcttttttcattggt 15147  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 361 - 393
Target Start/End: Complemental strand, 60610 - 60578
Alignment:
Q  361 tgacaactttcattttctctctttttattggtc 393  Q
    ||||||||||||||||||||||||| |||||||    
T  60610 tgacaactttcattttctctcttttcattggtc 60578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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