View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_300 (Length: 251)
Name: NF7850A_low_300
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_300 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 15037023 - 15036785
Alignment:
| Q |
1 |
ggtttgatctaaatagctttattttgtttgataaagcctttattgattcattttgatgctttaataagcatacataatatgtgcatattagtttttcact |
100 |
Q |
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| T |
15037023 |
ggtttgatctaaatagctttattttgtttgataaagcctttatagattcattttgatgctttaataagaatacataatatgtgtatattagtctttcact |
15036924 |
T |
|
| Q |
101 |
agcatctaacataagctctctatttttcatgtcatataactgattttaaaatagagttataaaagtggagatttttgataaaatagcataattttattgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
15036923 |
agcatctaacataagctctctatttttcatgtcataccactgattttaaaatagagttataaaagtggagatttttgataaaatagtataattttattgg |
15036824 |
T |
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| Q |
201 |
atgttagtgtaaaattagtttacactcataataaatatt |
239 |
Q |
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| T |
15036823 |
atgttagtgtaaaattagtttacactcataataaatatt |
15036785 |
T |
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