View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_302 (Length: 250)
Name: NF7850A_low_302
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_302 |
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Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 11364430 - 11364201
Alignment:
| Q |
18 |
ataaagtatatagatgaagagaatagaatgaaataaccgacttcaaactaaataaataaatagatgaaaacacagaaccaatgtgaaattgaaatacatt |
117 |
Q |
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| T |
11364430 |
ataaagtatatagatgaagagaatagaatgaaataacagacttcaaactaaataaataaatagatgaaaacacagaaccaatgtgaaattgaaatacatt |
11364331 |
T |
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| Q |
118 |
cacattgttgatattattgagtttaaatttaagaaagaaaaagaataaaaacattaaaatgattttaagattcgatgatacaaaatggattaagcactaa |
217 |
Q |
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| T |
11364330 |
cacattgttgatattattgagtttaaatttaagaaagaaaaagaataaaaacattaaaatgattttaagattcgatgatacaaaatggattaagcactaa |
11364231 |
T |
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| Q |
218 |
ctaaatcatctttataccaacaccaaactc |
247 |
Q |
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|||||||||||||||||||| |||| |||| |
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| T |
11364230 |
ctaaatcatctttataccaataccagactc |
11364201 |
T |
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