View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_322 (Length: 249)
Name: NF7850A_low_322
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_322 |
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Alignment Details
Target: chr8 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 8229190 - 8229357
Alignment:
| Q |
5 |
cgcaataatctatttttacaaaatcactatcaagtgtaaacaactagcacaaaaattgatttctttatctaagaaatatatatttgtgtttatgatacaa |
104 |
Q |
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| T |
8229190 |
cgcaataatctatttttacaaaatcactatcaagtgtaaacaactagcacaaaaattgatttctttatctaagaaatatatatttgtgtttatgatacaa |
8229289 |
T |
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| Q |
105 |
gtgggaagaaaacttatacaagtgggaagaaaattgttgacacaaaagagatttctagataatacaga |
172 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |
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| T |
8229290 |
gtgggaagaaaacttatacaagtgggaagaaaattgttgacacaaaagtgatttctagatactacaga |
8229357 |
T |
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