View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_324 (Length: 249)
Name: NF7850A_low_324
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_324 |
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Alignment Details
Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 16 - 242
Target Start/End: Original strand, 10427144 - 10427370
Alignment:
| Q |
16 |
atacttagtagaagacatatatatagctgtaagtgaattaaactttactaggaaaactaatatatatcattcaactttcttacgggtataatatgttgat |
115 |
Q |
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| T |
10427144 |
atacttagtagaagacatatatatagctgtaagtgaattaaactttactaggaaaactaatatatatcattcaactttcttacgggtataatatgttgat |
10427243 |
T |
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| Q |
116 |
tcaatttcattgatatttcaacacattgaagttgagaacaaaaaattggtaggttatgtgggccttgaagttgcacaatgcttagctgttgatgtagtat |
215 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
10427244 |
tcaatttcattgatatttcgacacattgaagttgagaacaaaaaattggtaggttatgtgggccttgaagttgcacactgcttagctgttgatgtagtat |
10427343 |
T |
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| Q |
216 |
atactttgaaaacttagggttaatact |
242 |
Q |
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| T |
10427344 |
atactttgaaaacttagggttaatact |
10427370 |
T |
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