View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_343 (Length: 246)
Name: NF7850A_low_343
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_343 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 31102305 - 31102084
Alignment:
| Q |
17 |
ttgtgagattcatgttaggcaaatcctaaattcgagtaatacacaaagagtgagattagagaaattcacctttgaaatggttttccttcctgttgatggt |
116 |
Q |
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| T |
31102305 |
ttgtgagattcatgttaggcaaatcctaaattcgagtaaaacacaaagagtgagattagagaaattcacctttgaaatcgttttccttcctgttgatggt |
31102206 |
T |
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| Q |
117 |
aaaaacttttctgccttccacgctgtttggaatgagcgttaacttaggagaaattattaggagacaaacaaagaatataaaacacttttgggtgaacatt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31102205 |
aaaaacttttctgccttccacgctgtttggaatgagcgttaacttaggagaaattattaggagacaaacaaagaatataaaacacttttgggtgaacatt |
31102106 |
T |
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| Q |
217 |
ttcatgataagtgacaacacca |
238 |
Q |
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|||||||||||||||||||||| |
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| T |
31102105 |
ttcatgataagtgacaacacca |
31102084 |
T |
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