View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_361 (Length: 243)
Name: NF7850A_low_361
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_361 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 31644897 - 31644661
Alignment:
| Q |
1 |
gtctagcatccaggatattatgagttatgcttttattccatttatcaaagctagtcaaatatatttctatacagttccaaaatcttgacagaatatcttg |
100 |
Q |
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| T |
31644897 |
gtctagcatccgggatattatgagttatgcttttattccgtttatcaaagctagtcaaatatatttctagacagttccaaaatcttgacagaatatcttg |
31644798 |
T |
|
| Q |
101 |
atgaacggcatagagaggattagcagatgctcgactaccagtgaccgagcatgaattcaaaagaagcttagccctggtgttttcacttttcagtaactga |
200 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31644797 |
atgaacggcatagagaggattagcagatgcttgactaccagtgaccgtgcatgaattcaaaagaagcttagccctggtgttttcacttttcagtaactga |
31644698 |
T |
|
| Q |
201 |
attgattacctgatttagttttgttcttaatattctt |
237 |
Q |
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|||||||||||||||| |||||||||||||||||||| |
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| T |
31644697 |
attgattacctgatttggttttgttcttaatattctt |
31644661 |
T |
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