View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_428 (Length: 231)
Name: NF7850A_low_428
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_428 |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 25933607 - 25933834
Alignment:
| Q |
1 |
atgtttcctttgcaagcaggcttttactaatggaatatgcaacccatcttttaagaattgctacaacattatttgaagcaatggttaagaaccttgagct |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25933607 |
atgtttcctttgcaagcaggcttttactaatggaatatgcaacccatcttttaagaattgctacaacattatttgaagcaatggttaagaaccttgagct |
25933706 |
T |
|
| Q |
101 |
gaatctgaaaacaacaaagtcatatttatcagaaaacaatggcaacatacgtgtctatcgttatccacccactgatgttggttggggcatggaggttcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25933707 |
gaatctgaaaacaacaaagtcatatttatcagaaaacaatggcaacatacgtgtctatcgttatccacccactgatgttggttggggcatggaggttcat |
25933806 |
T |
|
| Q |
201 |
acagatagttcagtgttgtccatattga |
228 |
Q |
| |
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|||||||||||||||||||||||||||| |
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| T |
25933807 |
acagatagttcagtgttgtccatattga |
25933834 |
T |
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