View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_458 (Length: 230)
Name: NF7850A_low_458
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_458 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 6285256 - 6285033
Alignment:
| Q |
1 |
attaacattactttcactaaatcggtaatgaatgacatataccttccagaaaactttgagctgaaaagcaatggtgtacatgtattatgtatattatgag |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6285256 |
attaacattactttcactaaatcggtaatgaatgacatataccttccagaaaactttgagctgaaaagcaatggtgtacatgtattatgtatattatgag |
6285157 |
T |
|
| Q |
101 |
ttggactgtagtacattttatatggttgaaatgtcttaatttgttaaatctgaactgaaatgtcttaatatgcatgtgtcattgcttaaaaaacttgtct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6285156 |
ttggactgtagtacattttatatggttgaaatgtcttaatttgttaaatctgaactgaaatgtcttaatatgcatgtgtcattgcttaaaaaacttgtct |
6285057 |
T |
|
| Q |
201 |
ggtcggcatgttatttaacctttt |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
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|
| T |
6285056 |
ggtcggcatgttatttaacctttt |
6285033 |
T |
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