View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_461 (Length: 230)
Name: NF7850A_low_461
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_461 |
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Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 34348904 - 34348681
Alignment:
| Q |
1 |
attaatgagattaaatatttgtccatatatatgtttttcaccccacgttctcaatatcaaatcttatataagaattgaatgtctgtgaatatagaaacaa |
100 |
Q |
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| T |
34348904 |
attaatgagattaaatatttgtccatatatatgtttttcaccccacgttctcaatatcaaatcttatataagaattgaatgtctgtgaatatagaaacaa |
34348805 |
T |
|
| Q |
101 |
cgtgcttttacatttttataaattgatattaataataagtcacatgctcaaagctcaaaagctaaggttgcatgttctacatgaatacaaaacctaagaa |
200 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34348804 |
cgtgcttttacatttttataaattaatattaataataagtcacatgctcaaagctcaaaagctaaggttgcatgttctacatgaatacaaaacctaagaa |
34348705 |
T |
|
| Q |
201 |
tattaatacaagtcatataattaa |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
34348704 |
tattaatacaagtcatataattaa |
34348681 |
T |
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