View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_504 (Length: 226)
Name: NF7850A_low_504
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_504 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 8229885 - 8229666
Alignment:
| Q |
7 |
gttttcacaatggtggtggagccaaatattgatctttctctaattatgggagttgttgtagcttatagtcttattaaaagtaaaatgtaagtaagtatat |
106 |
Q |
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| T |
8229885 |
gttttcacaatggtggtggagccaaatattgatctttctctaattatgggagttgttgtagcttatagtcttattaaaagtaaaatgtaattaagtatat |
8229786 |
T |
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| Q |
107 |
tggaaaaaagagagtagtgaacaacaatgatttgaatcttgtggaagtcattttggtttacaaaatgtattgctacgcccagattcaagtttaagctttg |
206 |
Q |
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| T |
8229785 |
tggaaaaaagagagtagtgaacaacaatgatttgaatcttgtggaagtcattttggtatacaaaatgtattgctaagcccagattcaagtttaagctttg |
8229686 |
T |
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| Q |
207 |
gaaatggcttgtgatgcttg |
226 |
Q |
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| T |
8229685 |
gaaatggcttgtgatgcttg |
8229666 |
T |
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