View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7850A_low_519 (Length: 224)

Name: NF7850A_low_519
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7850A_low_519
NF7850A_low_519
[»] chr8 (1 HSPs)
chr8 (21-50)||(37918193-37918222)


Alignment Details
Target: chr8 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 50
Target Start/End: Original strand, 37918193 - 37918222
Alignment:
21 ggtgtgagtttagatgatgcatttttggag 50  Q
    ||||||||||||||||||||||||||||||    
37918193 ggtgtgagtttagatgatgcatttttggag 37918222  T

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