View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850A_low_84 (Length: 372)
Name: NF7850A_low_84
Description: NF7850A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850A_low_84 |
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Alignment Details
Target: chr1 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 1 - 361
Target Start/End: Complemental strand, 6586649 - 6586289
Alignment:
| Q |
1 |
tcattaggtgttttagtgttacatgtacctcttagttggcttctaatattgaaacttaattggggcttagttggagctgcaattattctaaacacatcat |
100 |
Q |
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| T |
6586649 |
tcattaggtgttttagtgttacatgtacctcttagttggcttctaatattgaaactaaattggggcttagttggagctgcaattattctaaacacatcat |
6586550 |
T |
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| Q |
101 |
ggtggttgattgtcattggtcaacttttgtacattttcatcaccaaatcagatggtgcttggagtggattctcatggctagcttttgcagatttgtttaa |
200 |
Q |
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| T |
6586549 |
ggtggttgattgtcattggtcaacttttgtacattttcatcaccaaatcagatggtgcttggagtggattctcatggctagcttttgcagatttgtttaa |
6586450 |
T |
|
| Q |
201 |
ttttttgaaactttctttagcttcagctgttatgttatggtatattttcacaaacttcatattttcaattcgacttaattaatatttgaatggaaacttt |
300 |
Q |
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| T |
6586449 |
ttttttgaaactttctttagcttcagctgttatgttatggtatattttcacaaacttcatattttcaattcgacttaattaatatttgaatggaaacttt |
6586350 |
T |
|
| Q |
301 |
atgttgaattgaattttgaaaatgtgatggcagcttggagttttggtacttgatgatattg |
361 |
Q |
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| T |
6586349 |
atgttgaattgaattttgaaaatgtgatggcagcttggagttttggtacttgatgatattg |
6586289 |
T |
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