View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7850_high_24 (Length: 355)
Name: NF7850_high_24
Description: NF7850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7850_high_24 |
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Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 145 - 345
Target Start/End: Original strand, 41956059 - 41956259
Alignment:
| Q |
145 |
aaatacatagttgtcctataaattgtcaaacaaatgattgctcacaacttcacataacacaactcaattttaaaactatgcatttgatggctcattctct |
244 |
Q |
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| T |
41956059 |
aaatacatagttatcccataaattgtcaaacaaatggttgttcacaacttcacataacacaactcaattttaaaactatgcatttgatggctcattctct |
41956158 |
T |
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| Q |
245 |
aatacaaacacttgtaatgtcattttatttttatattccaagtctttgttttatcagcttttatttaaaaaatgaaaattgaagcacttccttcatctct |
344 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41956159 |
aatacaaacacttgtaatgtcattttatttttatattccaagtctttgttttatcagcttttatttaaaaaatgaaaattgaagcacttccttcatctct |
41956258 |
T |
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| Q |
345 |
g |
345 |
Q |
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| T |
41956259 |
g |
41956259 |
T |
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