View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7850_low_12 (Length: 613)

Name: NF7850_low_12
Description: NF7850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7850_low_12
NF7850_low_12
[»] chr7 (21 HSPs)
chr7 (109-599)||(10287917-10288408)
chr7 (109-597)||(15873103-15873590)
chr7 (108-595)||(11035507-11035996)
chr7 (91-489)||(13163377-13163780)
chr7 (117-599)||(22078216-22078687)
chr7 (109-599)||(21490614-21491113)
chr7 (109-599)||(18366460-18366947)
chr7 (109-500)||(12910867-12911249)
chr7 (290-595)||(9993915-9994220)
chr7 (111-500)||(12195886-12196273)
chr7 (110-531)||(40106463-40106880)
chr7 (109-574)||(48652966-48653418)
chr7 (286-489)||(49169641-49169846)
chr7 (112-318)||(3692152-3692357)
chr7 (397-488)||(24056671-24056763)
chr7 (377-483)||(9554537-9554644)
chr7 (404-589)||(3691932-3692124)
chr7 (218-311)||(24053069-24053164)
chr7 (104-180)||(49169485-49169561)
chr7 (76-106)||(7646712-7646742)
chr7 (109-141)||(7646951-7646983)
[»] chr5 (18 HSPs)
chr5 (109-599)||(537409-537899)
chr5 (80-574)||(42861984-42862472)
chr5 (117-488)||(6309396-6309770)
chr5 (188-500)||(38001668-38001969)
chr5 (286-500)||(40691563-40691781)
chr5 (286-500)||(30910447-30910662)
chr5 (118-352)||(42640267-42640498)
chr5 (109-311)||(27027155-27027355)
chr5 (111-237)||(4557222-4557350)
chr5 (389-483)||(23211155-23211249)
chr5 (122-318)||(105425-105620)
chr5 (109-180)||(40691861-40691932)
chr5 (109-338)||(38279264-38279480)
chr5 (286-371)||(4557364-4557450)
chr5 (77-141)||(25043936-25044000)
chr5 (112-163)||(25674369-25674420)
chr5 (282-390)||(28201902-28202010)
chr5 (206-251)||(30910686-30910731)
[»] chr6 (16 HSPs)
chr6 (109-599)||(34636776-34637266)
chr6 (109-599)||(32449393-32449883)
chr6 (109-599)||(23259757-23260266)
chr6 (109-498)||(10750755-10751145)
chr6 (109-489)||(26181816-26182199)
chr6 (108-599)||(24164375-24164863)
chr6 (109-574)||(13772546-13773006)
chr6 (290-530)||(20559456-20559693)
chr6 (80-186)||(19814712-19814818)
chr6 (534-599)||(20558083-20558148)
chr6 (376-483)||(11166045-11166153)
chr6 (393-485)||(31275943-31276036)
chr6 (443-483)||(31276852-31276892)
chr6 (222-366)||(31277966-31278108)
chr6 (109-141)||(11165776-11165808)
chr6 (109-141)||(31875831-31875863)
[»] chr1 (27 HSPs)
chr1 (108-599)||(338697-339187)
chr1 (109-599)||(43406494-43406984)
chr1 (109-599)||(37666316-37666795)
chr1 (107-599)||(6836487-6836968)
chr1 (111-574)||(35761147-35761627)
chr1 (290-574)||(18472249-18472538)
chr1 (108-272)||(51442504-51442672)
chr1 (335-489)||(8422256-8422411)
chr1 (376-589)||(33007044-33007262)
chr1 (376-487)||(24276088-24276199)
chr1 (376-500)||(19198193-19198321)
chr1 (376-483)||(24055660-24055767)
chr1 (111-188)||(19197952-19198029)
chr1 (122-253)||(44781389-44781518)
chr1 (109-199)||(20147830-20147919)
chr1 (377-476)||(33009104-33009204)
chr1 (368-488)||(16075403-16075525)
chr1 (376-483)||(16111072-16111184)
chr1 (77-141)||(20600486-20600550)
chr1 (407-500)||(9536769-9536864)
chr1 (238-311)||(25647809-25647883)
chr1 (223-307)||(33006887-33006972)
chr1 (244-318)||(19198065-19198137)
chr1 (109-153)||(15973884-15973929)
chr1 (206-251)||(18472176-18472221)
chr1 (120-161)||(33006746-33006787)
chr1 (109-141)||(24276435-24276467)
[»] chr2 (18 HSPs)
chr2 (109-599)||(40448070-40448559)
chr2 (111-500)||(44789194-44789589)
chr2 (107-590)||(41339389-41339864)
chr2 (107-492)||(34396977-34397365)
chr2 (117-500)||(40728576-40728947)
chr2 (286-574)||(35670071-35670364)
chr2 (109-591)||(12773566-12774048)
chr2 (129-500)||(18291901-18292262)
chr2 (109-264)||(32735251-32735403)
chr2 (376-531)||(28266544-28266705)
chr2 (123-302)||(28266290-28266470)
chr2 (376-492)||(23827782-23827899)
chr2 (290-488)||(29271283-29271482)
chr2 (76-141)||(19713477-19713542)
chr2 (376-483)||(11387647-11387755)
chr2 (93-140)||(11388027-11388074)
chr2 (109-162)||(35669623-35669676)
chr2 (109-141)||(19703916-19703948)
[»] chr4 (13 HSPs)
chr4 (109-599)||(40459540-40460029)
chr4 (122-500)||(28968374-28968757)
chr4 (210-500)||(69990-70278)
chr4 (109-563)||(2761219-2761677)
chr4 (296-599)||(49499643-49499950)
chr4 (299-489)||(55162891-55163082)
chr4 (206-376)||(42898238-42898406)
chr4 (376-492)||(10276745-10276862)
chr4 (79-180)||(34827863-34827965)
chr4 (400-485)||(41869372-41869458)
chr4 (109-153)||(70297-70341)
chr4 (76-147)||(41951146-41951218)
chr4 (129-180)||(19665190-19665239)
[»] chr3 (18 HSPs)
chr3 (109-597)||(46403725-46404216)
chr3 (108-599)||(16975909-16976399)
chr3 (109-599)||(5003856-5004348)
chr3 (117-599)||(7335826-7336311)
chr3 (109-590)||(9104696-9105168)
chr3 (109-488)||(43277168-43277548)
chr3 (111-599)||(11937021-11937506)
chr3 (109-237)||(17537618-17537751)
chr3 (358-488)||(8731443-8731575)
chr3 (358-488)||(9083330-9083462)
chr3 (108-348)||(3504511-3504747)
chr3 (376-483)||(5704621-5704729)
chr3 (129-311)||(37979833-37980014)
chr3 (376-483)||(1461464-1461571)
chr3 (392-500)||(17542113-17542223)
chr3 (376-483)||(16972610-16972718)
chr3 (122-193)||(31283653-31283724)
chr3 (109-141)||(5704965-5704997)
[»] scaffold0413 (1 HSPs)
scaffold0413 (109-599)||(19-511)
[»] scaffold0657 (2 HSPs)
scaffold0657 (105-502)||(1460-1858)
scaffold0657 (80-258)||(8547-8723)
[»] scaffold0041 (1 HSPs)
scaffold0041 (218-599)||(32581-32949)
[»] chr8 (15 HSPs)
chr8 (109-500)||(44436790-44437181)
chr8 (109-591)||(40840649-40841135)
chr8 (109-500)||(41957597-41957975)
chr8 (384-552)||(35840786-35840955)
chr8 (273-433)||(22815622-22815783)
chr8 (286-488)||(6150220-6150424)
chr8 (109-280)||(22640563-22640735)
chr8 (383-483)||(12659338-12659439)
chr8 (376-483)||(10250945-10251053)
chr8 (109-390)||(26162358-26162631)
chr8 (245-311)||(35841029-35841096)
chr8 (109-180)||(6161743-6161814)
chr8 (84-140)||(29132249-29132305)
chr8 (109-232)||(35841086-35841207)
chr8 (109-141)||(4233108-4233140)
[»] scaffold1838 (2 HSPs)
scaffold1838 (299-531)||(840-1077)
scaffold1838 (216-251)||(1118-1153)
[»] scaffold0013 (2 HSPs)
scaffold0013 (109-339)||(240797-241003)
scaffold0013 (368-488)||(242430-242552)
[»] scaffold0120 (2 HSPs)
scaffold0120 (376-483)||(2115-2223)
scaffold0120 (109-141)||(1845-1877)
[»] scaffold0002 (2 HSPs)
scaffold0002 (377-492)||(356356-356472)
scaffold0002 (78-141)||(356044-356107)
[»] scaffold0069 (1 HSPs)
scaffold0069 (377-483)||(11403-11510)
[»] scaffold0028 (1 HSPs)
scaffold0028 (77-140)||(147493-147556)
[»] scaffold0150 (1 HSPs)
scaffold0150 (77-140)||(34855-34918)
[»] scaffold0006 (1 HSPs)
scaffold0006 (377-483)||(89863-89970)
[»] scaffold0054 (1 HSPs)
scaffold0054 (122-227)||(32252-32356)
[»] scaffold0631 (1 HSPs)
scaffold0631 (109-141)||(5323-5355)


Alignment Details
Target: chr7 (Bit Score: 399; Significance: 0; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 109 - 599
Target Start/End: Original strand, 10287917 - 10288408
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  | ||    
T  10287917 tgtaacgccccggattttggtccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatctatattatat--tata 10288014  T
Q  209 gcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaa-tttctactaaagttacaattcaatcaaaaaccca 307  Q
    ||||| |||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10288015 gcaaaacctatacaaaattcttaacataatgtaattaaaactcttaaactaatatccttcaaaaaatttctactaaagttacaattcaatcaaaaaccca 10288114  T
Q  308 atttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatcca 406  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  10288115 atttcgtcccccgtacgcacttcaagcaaaaacttcaaagcatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatcca 10288214  T
Q  407 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctttaa 505  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10288215 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaa 10288314  T
Q  506 ggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10288315 ggtaaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacacagatgaataacagacccaatgcaatgcaatgatgt 10288408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 109 - 597
Target Start/End: Original strand, 15873103 - 15873590
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||  | ||    
T  15873103 tgtaacgccccggattttggtccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttacttcatctatattatat--tcta 15873200  T
Q  209 gcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaa 308  Q
    ||||| |||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15873201 gcaaaacctatacaaaattcttaacataatgtaattaaaactcttaaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaa 15873300  T
Q  309 tttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaa 407  Q
    ||||||||||||||  |||||| ||||||| |||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||    
T  15873301 tttcgtcccccgtatacacttccagcaaaaacttcaaagcatagatcatctcttctttggtacctaaaatgttagtgcaagggtcaatttccttatccaa 15873400  T
Q  408 attggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctttaag 506  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  15873401 attggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtc-ttaag 15873499  T
Q  507 gtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgat 597  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15873500 gtaaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacacaaatgtataacagacccaatgcaatgcaatgat 15873590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 108 - 595
Target Start/End: Original strand, 11035507 - 11035996
Alignment:
Q  108 atgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaa--cactactatttatttatttcatcaataatatatatt 205  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||| ||||||||||||  ||||||||||||||||||||||||||| || || |     
T  11035507 atgtaacgctccggatttagatccaagacattacacctaaatcattttctttttctgaaaaaaacactactatttatttatttcatcaatagtaaat-tc 11035605  T
Q  206 ttagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacc 305  Q
    |||||||| |||||||| ||| ||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11035606 ttagcaaaacctatacacaatgcttgacataatttaattaaaactcttaaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacc 11035705  T
Q  306 caatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatc 404  Q
    |||||| |||||| ||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  11035706 caattttgtcccc-gtacgcacttcaagcaaaaacttcaaagcatagaccatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatc 11035804  T
Q  405 caaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtcttt 503  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  11035805 caaattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtcttt 11035904  T
Q  504 aaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatg 595  Q
     |||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11035905 gaggtaaagttcatacacatttcttttgtatatataacagtataatcacttatcaacacacagatgtataacagacccaatgcaatgcaatg 11035996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 91 - 489
Target Start/End: Original strand, 13163377 - 13163780
Alignment:
Q  91 attgctctgataccataatgtaacgccccggattttgatccaagacattacgcctaaatcattttcctttt--ctg--aaaaacactactatttatttat 186  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||||| |||||| |||||  ||||  |||  ||||||||||||||||||||||    
T  13163377 attgctctgatatcatgatgtaacgctccggattttgatccaagacattacgtctaaattatttttttttttcctgaaaaaaacactactatttatttat 13163476  T
Q  187 ttcatcaataatatatattttagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagt 286  Q
    ||||||||||||| || | |||||||| |||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  13163477 ttcatcaataataaat-tcttagcaaaacctatacaaaattcttgacataatttaattaaaactcttaaactaatatccttcaaaaatttctattaaagt 13163575  T
Q  287 tacaattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagc-aaaacttcaaagcatagatcatctcttctttgatacctaaaatattagtgt 385  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| | |||||||||||||||||| ||||| ||||||| || |||||||||||||||    
T  13163576 tacaattcaatcaaaaacccaattttgtccctcgtacgcacttcaaacaaaaacttcaaagcatagaccatctattctttggtatctaaaatattagtgt 13163675  T
Q  386 aagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag 484  Q
    ||||||||||||||||| |||||||||||||||| |||||||| || ||||||| || ||| |||||| || |||||||| ||||| |||||||| ||||    
T  13163676 aagggtcaatttccttaaccaaattggttcatactcaaagcaccagaaacaatgtcataaattagataatatcaaaacttatcaataaaaaagaattaag 13163775  T
Q  485 aaaat 489  Q
    |||||    
T  13163776 aaaat 13163780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 117 - 599
Target Start/End: Complemental strand, 22078687 - 22078216
Alignment:
Q  117 cccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatt-tcatcaataatatatattttagcaaagc 215  Q
    ||||||||| ||||||||||||| |||||||  |||| || ||||| |||||  || |||||||  || || |||| ||||||| || | ||||||||      
T  22078687 cccggatttcgatccaagacattgcgcctaatccattctcattttc-gaaaatgaccactatttcctttttatcattaataataaat-tcttagcaaaat 22078590  T
Q  216 ctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtc 315  Q
    |||||||||| ||||||||||||||||| ||||||  | || |||||||||| |||| ||            ||||||| || ||||||||||| | |||    
T  22078589 ctatacaaaaatcttaacataatttaatgaaaattactaaaataatatcctttaaaattt------------acaattcgattaaaaacccaatat-gtc 22078503  T
Q  316 ccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaaattggtt 414  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22078502 ccccgtacgcacttcaagcaaaaacttcaaagcatagaccatctcttctttggtacctaaaatattagtgtaagggtcaatttccttatccaaattggtt 22078403  T
Q  415 catacc-caaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaaggtaaag 512  Q
    |||| | ||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  22078402 cataactcaaagtacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcagaaagaaataagaaaaatacatttaagtctttaaggtaaag 22078303  T
Q  513 ttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    |||| ||||||||||||||| |||||||  ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  22078302 ttcatacacatttcttttgtatatataaatgtttaatcacttatcaacacatagatgtataacagacctaatgcaatgcaatgatgt 22078216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 109 - 599
Target Start/End: Original strand, 21490614 - 21491113
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttc---atcaataatatatatt 205  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| || ||||| |||||  ||||| |||| ||| |||    |||| |||||   |||    
T  21490614 tgtaacgccccagattttgatccaagacattacgcctaaatcattctcattttc-gaaaattactaccatttttttttttttttatcattaataataatt 21490712  T
Q  206 -ttagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaa 303  Q
     ||||||||  |||||||||||||||||||||||||||||||| ||||  |||||| |||||||||||| | | ||||||| ||| |||||||| ||||     
T  21490713 cttagcaaaatctatacaaaattcttaacataatttaattaaacttctcaaactaaatatccttcaaaattat-tactaaaattagaattcaattaaaa- 21490810  T
Q  304 cccaatttcgtcccccgtacgcacttcaagcaaaacttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttat 403  Q
    ||||||||| ||||| | |||| |||||||||||||  ||||||||| | ||| ||||||||| |||||||||| |||||||||||||||||||||||||    
T  21490811 cccaatttcttcccc-gcacgcgcttcaagcaaaacaccaaagcataca-catgtcttctttggtacctaaaatgttagtgtaagggtcaatttccttat 21490908  T
Q  404 ccaaattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtaa----caaaacttctcaatcaaaaagaaataa-gaaaatacatttaa 497  Q
    |||||||||||||||| ||||||||||||| ||||| || |||||||||||||     |||||||||||||| |||||||||||| ||||||||||| ||    
T  21490909 ccaaattggttcatactcaaagcacaagaaacaatgtcataaaatagatagtatatatcaaaacttctcaattaaaaagaaataaggaaaatacattcaa 21491008  T
Q  498 gt------ctttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgc 591  Q
    ||      ||||||  ||| ||||||||| ||||||||||  | ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21491009 gttatatgctttaa-ataaggttcacaca-atttcttttg-ctttataatagtttaatcacttatcaacacacaaatgtataacagacccaatgcaatgc 21491105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 109 - 599
Target Start/End: Original strand, 18366460 - 18366947
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    |||||||||||| |||||||||||||||||||||||||||||||| || ||||| |||||  ||||||||||  || | |||| ||||||| || | |||    
T  18366460 tgtaacgccccgaattttgatccaagacattacgcctaaatcattctcattttc-gaaaattactactattttcttttatcattaataataaat-tctta 18366557  T
Q  209 gcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaaccca 307  Q
    |||||  |||||||||||||||||||||||||||||||| ||||  |||||| |||||||||||  | | | ||||| |||||||||||| |||| |  |    
T  18366558 gcaaaatctatacaaaattcttaacataatttaattaaacttctcaaactaaatatccttcaaagttattt-ctaaaattacaattcaattaaaatc--a 18366654  T
Q  308 atttcgtcccccgtacgcacttcaagcaaaacttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaa 407  Q
    ||||| ||||  | |||| |||||||||||||  |||||  || | ||| ||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  18366655 atttcttccct-gcacgcgcttcaagcaaaac--caaagtgtaca-catgtcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaa 18366750  T
Q  408 attggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataa-gaaaatacatttaagt------ 499  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||| |||||||||||||| |||||||||||| ||||||||||| ||||          
T  18366751 attggttcatacccaaagcacaagaaacaatgtcataaaatagatagtatcaaaacttctcaattaaaaagaaataaggaaaatacattcaagttatatg 18366850  T
Q  500 ctttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    ||||||  |||  |||||||| ||||||||||  | ||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  18366851 ctttaa-ataagcttcacaca-atttcttttg-ctttataatagtttaatcacttatccacacacaaatgtataacagacccaatgcaatgcaattatgt 18366947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 109 - 500
Target Start/End: Original strand, 12910867 - 12911249
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatt--tcatcaataatatatattt 206  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||| ||||  ||||| ||||||||||| ||| ||  |||||||||||| || | |    
T  12910867 tgtaacgccccggattttagtccaagacattacgcctaattcattttcttttttcgaaaatcactactattttttttttaatcatcaataataaat-tct 12910965  T
Q  207 tagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaacc 305  Q
    |||||||  |||||||||||||||||||||||||||| ||||||| | || ||| ||||||| |||| ||            ||||||| ||||||||||    
T  12910966 tagcaaaatctatacaaaattcttaacataatttaataaaaattcctaaaataaatatcctttaaaattt------------acaattcgatcaaaaacc 12911053  T
Q  306 caatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatc 404  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||| ||| ||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  12911054 caattt-gtcccccgtacgcacttcaagcaaaaacttcaaagcatagaccatatctgctttggtacctaaaatattagtgtaagggtcaattttcttatc 12911152  T
Q  405 caaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc 500  Q
    ||||||||||||||| ||||||||||| ||||||| || ||||||||||||| |||||||||||||||||||||   |||||||||||||| |||||    
T  12911153 caaattggttcatactcaaagcacaagaaacaatgtcataaaatagatagtatcaaaacttctcaatcaaaaaggtttaagaaaatacattcaagtc 12911249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 290 - 595
Target Start/End: Complemental strand, 9994220 - 9993915
Alignment:
Q  290 aattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaag 388  Q
    |||| ||| |||||||||||||||||||| | ||||  ||||||||||| |  ||||||||| | ||| |||||||||||||||||||| ||||||| ||    
T  9994220 aatttaattaaaaacccaatttcgtcccc-gcacgc--ttcaagcaaaaacaccaaagcatacaccatgtcttctttgatacctaaaatgttagtgttag 9994124  T
Q  389 ggtc-aatttccttatccaaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaa 487  Q
    || | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  ||| ||||||    
T  9994123 gggccaatttccttatccaaattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaataaaaagaaaaaaagaaa 9994024  T
Q  488 a-tacatttaagtctttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgc 586  Q
    | ||||  |||||||||||||||||||||| ||||||||||||||| |||||| || |||||||||||||||||||| | ||||||||||||||||||||    
T  9994023 aatacacataagtctttaaggtaaagttcatacacatttcttttgtttatataccaatttaatcacttatcaacacaaaaatgtataacagacccaatgc 9993924  T
Q  587 aatgcaatg 595  Q
    |||||||||    
T  9993923 aatgcaatg 9993915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 111 - 500
Target Start/End: Original strand, 12195886 - 12196273
Alignment:
Q  111 taacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaa--------aaacactactatttatttatttcatcaataatatat 202  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||        ||||||||||||||||||||||||| ||||||| ||    
T  12195886 taacgccccagattttgatccaagacattacgcctaaattattttctttttctgaagaaaaaaaaaacactactatttatttatttcataaataataaat 12195985  T
Q  203 attttagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaa 301  Q
     | ||||||||  ||||||||| |||||||||||||||||| ||||||||| || ||| ||||||| || | ||            ||||||| ||||||    
T  12195986 -tcttagcaaattctatacaaagttcttaacataatttaatgaaaattcttaaaataaatatcctttaacattt------------acaattcgatcaaa 12196072  T
Q  302 aacccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttcct 400  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||||||| |||||||||| |||||||||||    
T  12196073 aacccaattt-gtcccccgtacgcacttcaagcaaaaacttcaaagtatagaccatctcttctttggtacctaaaatgttagtgtaagagtcaatttcct 12196171  T
Q  401 tatccaaattggttcatacccaaagca-caagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaag 498  Q
    ||||||||||||||||||| ||||||| ||  ||||||| ||  ||||||||| || |||||||| |||||||||||||| |||| |||||||||| |||    
T  12196172 tatccaaattggttcatactcaaagcaccataaacaatgtcatgaaatagataatagcaaaacttatcaatcaaaaagaattaagaaaaatacattcaag 12196271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 110 - 531
Target Start/End: Complemental strand, 40106880 - 40106463
Alignment:
Q  110 gtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatt-tcatcaataatatatatttta 208  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||| || ||||  |||||  ||||||||||  || || |||||||||||| || | |||    
T  40106880 gtaacgcctcggattttgatccaagacattactcctaattcattctcatttta-gaaaattactactattttctttttatcatcaataataaat-tctta 40106783  T
Q  209 gcaaagcctatacaaaattcttaacataatttaattaaaa-ttcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaaccc 306  Q
    |||||  ||||||||||||||||||||||||||| ||||| ||| | || ||| ||||||| |||| ||            ||||||| |||||||| ||    
T  40106782 gcaaaatctatacaaaattcttaacataatttaactaaaaattcctaaaataaatatcctttaaaattt------------acaattcgatcaaaaatcc 40106695  T
Q  307 aatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatcc 405  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||  |||||||||| | |||||||||| ||| ||||||||||||||||| |||||    
T  40106694 aattt-gtcccccgtacgcacttcaagcaaaaacttcaaagcatagacaatctcttcttaggtacctaaaattttaatgtaagggtcaatttccatatcc 40106596  T
Q  406 aaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaa------ 497  Q
    |||||||||||||| ||||||||||| ||||||| || ||||||||||||| |||||||||||||||||||||| ||||| |||||||||| ||          
T  40106595 aaattggttcatactcaaagcacaagaaacaatgtcataaaatagatagtatcaaaacttctcaatcaaaaagatataagaaaaatacattcaagtcatt 40106496  T
Q  498 gtctttaaggtaaagttcacacacatttcttttg 531  Q
    |||||||| |||||||||||||||||||| ||||    
T  40106495 gtctttaa-gtaaagttcacacacatttcatttg 40106463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 109 - 574
Target Start/End: Original strand, 48652966 - 48653418
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatt-tcatcaataatatatatttt 207  Q
    |||||||||| | |||||||||||||||||||| ||||| ||||  || |||| ||||||  ||||||||||  || || |||| ||||||| || | ||    
T  48652966 tgtaacgccctgaattttgatccaagacattactcctaattcatgctcatttt-tgaaaattactactattttctttttatcatgaataataaat-tctt 48653063  T
Q  208 agcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaaccc 306  Q
    ||||||  | ||||||||||||| |||||||||||| ||||||| | || ||| ||||||| |||| ||            ||||||| || ||||||||    
T  48653064 agcaaaatcaatacaaaattctttacataatttaataaaaattcctaaaataaatatcctttaaaattt------------acaattcgat-aaaaaccc 48653150  T
Q  307 aatttcgtcccccg-tacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatc 404  Q
    ||||| |||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  48653151 aattt-gtcccccggtacgcacttcaagcaaaaacttcaaagcatagaccatctcttctttggtacctaaaatattaatgtaagggtcaatttccttatc 48653249  T
Q  405 caaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc--- 500  Q
    ||||||||||||||| ||||||||||| |||||||      |||||||| || ||||||||||||||||||||||  |||||||||||||| |||||       
T  48653250 caaattggttcatactcaaagcacaagaaacaatg------aatagataatatcaaaacttctcaatcaaaaagatttaagaaaatacattcaagtcata 48653343  T
Q  501 ---tttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataa 574  Q
       ||| | |||||||||| ||||||||||||||  | ||||| ||||||| |||||||||||||||||||| ||||    
T  48653344 tgtttttaagtaaagttcatacacatttcttttgcat-tataatagtttaa-cacttatcaacacacagatgaataa 48653418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 286 - 489
Target Start/End: Original strand, 49169641 - 49169846
Alignment:
Q  286 ttacaattcaa-tcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagt 383  Q
    ||||||||||| | |||||| |||||| ||||| |||||||||||||||||||| ||||||| |||||| ||||||||||||| |||||||||| ||| |    
T  49169641 ttacaattcaaataaaaaactcaattt-gtcccacgtacgcacttcaagcaaaaacttcaaatcatagaacatctcttctttggtacctaaaatgttaat 49169739  T
Q  384 gtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaata 482  Q
    ||| |||||||||| ||||||||||||||||||||| |||||||| || ||||||| || |||||||||| || |||||||| |||||||||||||| ||    
T  49169740 gtaggggtcaattttcttatccaaattggttcatactcaaagcaccagaaacaatgtcataaaatagataatatcaaaacttatcaatcaaaaagaatta 49169839  T
Q  483 agaaaat 489  Q
    |||||||    
T  49169840 agaaaat 49169846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 112 - 318
Target Start/End: Complemental strand, 3692357 - 3692152
Alignment:
Q  112 aacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactat-ttatttatttcatcaataatatatattttagc 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| ||||  ||||||||||||||| || ||| | |||||||| ||| || | |||||    
T  3692357 aacgctccggattttgatccaagacattacgcctaactcattttcttttttcgaaaaacactactatgttttttttatcatcaatcataaat-tcttagc 3692259  T
Q  211 aaagcctatacaaaattcttaacataatttaattaaaattcttgaact-aatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaat 309  Q
    ||| | ||||||||||||||| ||||||||||||||||||||| |||| |||||||||| |||||| || ||| | ||||||||||||| ||||||||||    
T  3692258 aaaacatatacaaaattcttagcataatttaattaaaattctttaactaaatatccttc-aaaattacttctataattacaattcaatc-aaaacccaat 3692161  T
Q  310 ttcgtcccc 318  Q
    |||||||||    
T  3692160 ttcgtcccc 3692152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 397 - 488
Target Start/End: Original strand, 24056671 - 24056763
Alignment:
Q  397 tccttatccaaattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaa 488  Q
    ||||||||||||||| ||||||| |||||||| |||| ||||| || |||||||||| || ||||||||||||||||||||||||||||||||    
T  24056671 tccttatccaaattgattcatactcaaagcactagaaacaatgtcataaaatagataatatcaaaacttctcaatcaaaaagaaataagaaaa 24056763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 377 - 483
Target Start/End: Original strand, 9554537 - 9554644
Alignment:
Q  377 tattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaa 475  Q
    ||||| ||||||||||||||| |||||| ||| |||||||||| ||||||||||| |||||||  | ||| ||||||||| |||||||||| ||||||||    
T  9554537 tattaatgtaagggtcaattttcttatctaaactggttcatactcaaagcacaagaaacaatgttataaagtagatagtatcaaaacttcttaatcaaaa 9554636  T
Q  476 agaaataa 483  Q
    ||||||||    
T  9554637 agaaataa 9554644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 404 - 589
Target Start/End: Complemental strand, 3692124 - 3691932
Alignment:
Q  404 ccaaattggttcatacccaaagcacaagaacaa--tgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtc 500  Q
    |||||||||||||||| ||||||||||||| ||  | | | ||||||||| ||| |||||||||||||||||||||||||||| |||||||||| |||||    
T  3692124 ccaaattggttcatactcaaagcacaagaaaaaattccaaaaaaatagatggtatcaaaacttctcaatcaaaaagaaataagaaaaatacattcaagtc 3692025  T
Q  501 -----tttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaat 589  Q
         ||| | | |||||||| ||||||||| ||||   |||||| |||||||||| |||| ||  |||||||  |||||| || |||||||||    
T  3692024 atacgttttaagaaaagttcagacacatttcctttg-caatataatagtttaatcaattatgaaatcacagataaataacaaactcaatgcaat 3691932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 218 - 311
Target Start/End: Original strand, 24053069 - 24053164
Alignment:
Q  218 atacaaaattcttaacataatttaattaaaattcttgaact-aatatccttcaaaaatttctactaaagttacaattcaatc-aaaaacccaattt 311  Q
    |||||||||||||||||||||||||||||||||||| || | |||||||||||||||| |||  | ||||| ||||| |||| |||||||||||||    
T  24053069 atacaaaattcttaacataatttaattaaaattcttaaattaaatatccttcaaaaatctcttatgaagttgcaattaaatcaaaaaacccaattt 24053164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 49169485 - 49169561
Alignment:
Q  104 cataatgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactattt 180  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||||||| || ||||  ||||| ||| |||||||    
T  49169485 catattgtaacgcctcggattttggtccaagacattacgcctaaatcattctcatttttagaaaatcacaactattt 49169561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 76 - 106
Target Start/End: Complemental strand, 7646742 - 7646712
Alignment:
Q  76 atttgtccgaggattattgctctgataccat 106  Q
    |||||||||||||||||||||||||||||||    
T  7646742 atttgtccgaggattattgctctgataccat 7646712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 141
Target Start/End: Complemental strand, 7646983 - 7646951
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattac 141  Q
    |||||||||||||||||| ||||||||||||||    
T  7646983 tgtaacgccccggattttcatccaagacattac 7646951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 390; Significance: 0; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 109 - 599
Target Start/End: Complemental strand, 537899 - 537409
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  | ||    
T  537899 tgtaacgccccggattttggtccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatctatattatat--tcta 537802  T
Q  209 gcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaa 308  Q
    ||||| |||||||||||||||||||| ||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  537801 gcaaaacctatacaaaattcttaacacaatgtaattaaaactcttaaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaa 537702  T
Q  309 tttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaa 407  Q
    |||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  537701 tttcgtcccccgtatgcacttccagcaaaaacttcaaagcatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaa 537602  T
Q  408 attggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctttaag 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  537601 attggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaag 537502  T
Q  507 gtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
     ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  537501 ataaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacagaaatgtataacagacccaatgcaatgcaatgatgt 537409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 80 - 574
Target Start/End: Complemental strand, 42862472 - 42861984
Alignment:
Q  80 gtccgaggattattgctctgataccataatgtaacgccccggattttg-atccaagacattacgcctaaatcattttccttttctgaaaaacactactat 178  Q
    |||||| ||||||| |||||||||| |||||||||||||| ||||||  ||||||||||||| |||||| ||||| || ||||| |||||  ||||||||    
T  42862472 gtccgaagattattactctgataccttaatgtaacgccccagattttttatccaagacattatgcctaattcattctcattttc-gaaaattactactat 42862374  T
Q  179 ttatttatt-tcatcaataatatatattttagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaattt 276  Q
    ||  || || |||| ||||||| || | ||||||||  |||||||||||||||||||||||||||| ||||||| | || ||| ||||||| |||| ||     
T  42862373 tttctttttatcattaataataaat-tcttagcaaaatctatacaaaattcttaacataatttaataaaaattcctaaaataaatatcctttaaaattt- 42862276  T
Q  277 ctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaa 375  Q
               |||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  42862275 -----------acaattcaatcaaaaatccaattt-gtcccccgtacgcacttcaagcaaaaacttcaaagcataaatcatctcttctttggtacctaaa 42862188  T
Q  376 atattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaa 475  Q
    |||||||||||||||||||||| |||||||||||| ||| |||| |||||||| | ||||||| || ||||||||||||| |||||||||||||||||||    
T  42862187 atattagtgtaagggtcaattttcttatccaaattagtttatactcaaagcaccaaaacaatgtcataaaatagatagtatcaaaacttctcaatcaaaa 42862088  T
Q  476 agaaataagaaaatacatttaagtc------tttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatg 569  Q
    |||  ||||||||||||||||||||      ||| | |||||||||| ||||||||||||||  | ||||| |||||||||||||||||||||| |||||    
T  42862087 agatttaagaaaatacatttaagtcatatgtttttaagtaaagttcatacacatttcttttgcat-tataatagtttaatcacttatcaacacagagatg 42861989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 117 - 488
Target Start/End: Complemental strand, 6309770 - 6309396
Alignment:
Q  117 cccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatt-tcatcaataatatatattttagcaaagc 215  Q
    |||||||||||||| |||||||||||||||| ||||| || |||||  ||||   |||||||||  || || |||| ||||||| || | ||||||||      
T  6309770 cccggattttgatctaagacattacgcctaattcattctcattttca-aaaatttctactattttctttttatcattaataataaat-tcttagcaaaat 6309673  T
Q  216 ctatacaaaattct---taacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttc 312  Q
    ||||||||||| ||   | ||||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6309672 ctatacaaaatgctgcttgacataatttaattaaaactca--aactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttt 6309575  T
Q  313 gtccccc-gtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaaatt 410  Q
    ||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  6309574 gtccccccgtatgcacttcaagcaaaaacttcaaagcatagaccatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaatt 6309475  T
Q  411 ggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaa 488  Q
    ||||||||| |||||||| || ||| ||| || | | |||||| || |||||||| |||||||| ||||| ||| ||||    
T  6309474 ggttcatactcaaagcaccagaaactatgtcatatattagataatatcaaaacttatcaatcaacaagaattaataaaa 6309396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 188 - 500
Target Start/End: Complemental strand, 38001969 - 38001668
Alignment:
Q  188 tcatcaataatatatattttagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagt 286  Q
    |||||||||||| || | ||||||||  |||||||||||||||||||||||||||| ||||||||| || ||| ||||||| |||| ||               
T  38001969 tcatcaataataaat-tcttagcaaaatctatacaaaattcttaacataatttaataaaaattcttaaaataaatatcctttaaaattt----------- 38001882  T
Q  287 tacaattcaatcaaaaa-cccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtg 384  Q
     ||||||| |||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  38001881 -acaattcgatcaaaaaacccaattt-gtccctcgtacgcacttcaagcaaaaacttcaaagcatagaccatctcttctttgatacctaaaatattagtg 38001784  T
Q  385 taagggtcaatttccttatccaaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag 484  Q
    |||| | |||||||||||||||||||||||||||| |||| ||| | ||||||| || ||||||||||||| ||||||||||||||||||||||  | |     
T  38001783 taagagccaatttccttatccaaattggttcatacacaaaacaccaaaacaatgtcataaaatagatagtatcaaaacttctcaatcaaaaagattttaa 38001684  T
Q  485 aaaatacatttaagtc 500  Q
    |||||||||| |||||    
T  38001683 aaaatacattcaagtc 38001668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 286 - 500
Target Start/End: Complemental strand, 40691781 - 40691563
Alignment:
Q  286 ttacaattcaa-tcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagt 383  Q
    ||||||||||| |||||||| ||||||  ||||||||||||||||||||||||| ||| |||||||||| ||| ||||||||| |||||||||| |||||    
T  40691781 ttacaattcaaatcaaaaactcaatttgttcccccgtacgcacttcaagcaaaaactttaaagcatagaccatatcttctttggtacctaaaatgttagt 40691682  T
Q  384 gtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaata 482  Q
    |||||||||||||||||||||||||||||||||||| |||||||| || ||||||  || |||||||||| ||  ||||||| |||||||||||||| ||    
T  40691681 gtaagggtcaatttccttatccaaattggttcatactcaaagcaccagaaacaatatcataaaatagataatattaaaacttatcaatcaaaaagaatta 40691582  T
Q  483 ag-aaaatacatttaagtc 500  Q
    || |||||||||| |||||    
T  40691581 agaaaaatacattcaagtc 40691563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 286 - 500
Target Start/End: Complemental strand, 30910662 - 30910447
Alignment:
Q  286 ttacaattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtg 384  Q
    ||||||||| |||||||||||||||| || || ||||||||||| |||||||| |||||||||||| | ||||||||||||  |||||||||||||||||    
T  30910662 ttacaattcgatcaaaaacccaattt-gttcctcgtacgcactttaagcaaaaacttcaaagcataaaccatctcttctttcgtacctaaaatattagtg 30910564  T
Q  385 taagggtcaatttccttatccaaattggttcatacccaaagca-caagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataa 483  Q
    ||||||||||||||||||||||||||||||||||| |||| || ||  ||||||| || ||| |||||| || ||||||||||||||||||||||  ||     
T  30910563 taagggtcaatttccttatccaaattggttcatactcaaaacaccataaacaatgtcataaagtagataatatcaaaacttctcaatcaaaaagatttat 30910464  T
Q  484 gaaaatacatttaagtc 500  Q
    |||| |||||| |||||    
T  30910463 gaaattacattcaagtc 30910447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 118 - 352
Target Start/End: Complemental strand, 42640498 - 42640267
Alignment:
Q  118 ccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatt-tcatcaataatatatattttagcaaagcc 216  Q
    |||||||||  ||||||||||||  ||||| |||||||| ||||   |||| ||||||||||| | |||| |||||||||||| || | |||||||| ||    
T  42640498 ccggattttagtccaagacattatacctaattcattttcatttttcaaaaatcactactattt-tatattatcatcaataataaat-tcttagcaaaacc 42640401  T
Q  217 tatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcc 316  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||| || ||||| |||||||||||| ||||| |||| |||||||    
T  42640400 tatacaaaattcttaacataatttaattaaaattcttaaattaatatccttc-aaaattacttctaaaattacaattcaat-aaaaatccaa-ttcgtcc 42640304  T
Q  317 cccgtacgcacttcaagc-aaaacttcaaagcataga 352  Q
     ||||||||||||||||| ||||||||||||||||||    
T  42640303 accgtacgcacttcaagcaaaaacttcaaagcataga 42640267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 109 - 311
Target Start/End: Complemental strand, 27027355 - 27027155
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    ||||| ||||||||||| |||||||| |||||||||||| | |||||| | ||| ||||| || | |||||| ||| | |||||||||||| || | |||    
T  27027355 tgtaatgccccggattt-gatccaaggcattacgcctaatttattttcttattc-gaaaatcatttctatttttttttatcatcaataataaat-tatta 27027259  T
Q  209 gcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaat-atccttcaaaaatttctactaaagttacaattcaatcaaaaaccca 307  Q
    | ||| | |||||||||||||||||||||||||| |||||||||| || |||| || |||||||||||||| ||||||||||||||||||||||||||||    
T  27027258 ggaaaacttatacaaaattcttaacataatttaactaaaattcttaaaataattatacttcaaaaatttcttctaaagttacaattcaatcaaaaaccca 27027159  T
Q  308 attt 311  Q
    ||||    
T  27027158 attt 27027155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 111 - 237
Target Start/End: Original strand, 4557222 - 4557350
Alignment:
Q  111 taacgccccggattttgatccaagacattacgcctaaatcattttccttt--tctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    ||||||| | ||||||| |||||||||||||||||||||| ||||  |||  | ||||||||||||||||||||||||||||||||||||||||||| ||    
T  4557222 taacgcctcagattttggtccaagacattacgcctaaatcttttttttttcttttgaaaaacactactatttatttatttcatcaataatatatattcta 4557321  T
Q  209 gcaaagcctatacaaaattcttaacataa 237  Q
    ||||| |||||||||||||||||||||||    
T  4557322 gcaaaacctatacaaaattcttaacataa 4557350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 389 - 483
Target Start/End: Complemental strand, 23211249 - 23211155
Alignment:
Q  389 ggtcaatttccttatccaaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataa 483  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||| ||||| ||||| || ||||| ||||||    
T  23211249 ggtcaatttccttatccaaattggttcatactcaaagcacaataacaatgccacaaagtagatagtatcaaaatttctcgataaaaaataaataa 23211155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 122 - 318
Target Start/End: Complemental strand, 105620 - 105425
Alignment:
Q  122 attttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatattttagcaaagcctatac 221  Q
    |||||||||||||||||||   |||| |||||||| | ||  |||||||||||||| || ||| | |||||||||||| || | |||| |||  ||||||    
T  105620 attttgatccaagacattatttctaattcattttcatgtttagaaaaacactactaattttttttatcatcaataataaat-tcttagtaaaatctatac 105522  T
Q  222 aaaattcttaacataatttaattaaaattcttgaact-aatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccc 318  Q
    ||| || ||||||||||| ||||||||||||| || | |||||||||  |||||| || ||||| |||| ||| |||||||||| |||||| ||||||    
T  105521 aaattttttaacataattcaattaaaattcttaaagtaaatatcctt-taaaattacttctaaaattactatttaatcaaaaactcaattttgtcccc 105425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 40691932 - 40691861
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactattt 180  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||  ||||| |||||||||||    
T  40691932 tgtaacgccccggattttgatccaagacattacgcctaaattattttcatttttagaaaatcactactattt 40691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 109 - 338
Target Start/End: Complemental strand, 38279480 - 38279264
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatt-tcatcaataatatatatttt 207  Q
    |||||||||  |||||||||||| ||||||||||||||| |||||  | ||||| |||||  ||||||||||  || || |||| ||||||| || | ||    
T  38279480 tgtaacgccttggattttgatcctagacattacgcctaattcattcacattttc-gaaaattactactattttctttttatcattaataataaat-tctt 38279383  T
Q  208 agcaaagcctatacaaaattcttaacataatttaattaaaattcttgaact-aatatccttcaaaaatttctactaaagttacaattcaatcaaaaaccc 306  Q
    ||||||  |||||||||||||||||||||||||||| ||||||| | || | ||||||||| |            ||| ||| ||||| |||||||||||    
T  38279382 agcaaaatctatacaaaattcttaacataatttaataaaaattcctaaaataaatatccttta------------aaatttaaaattcgatcaaaaaccc 38279295  T
Q  307 aatttcgtcccccgtacgcacttcaagcaaaa 338  Q
    ||||| ||||||||||||||||||||||||||    
T  38279294 aattt-gtcccccgtacgcacttcaagcaaaa 38279264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 286 - 371
Target Start/End: Original strand, 4557364 - 4557450
Alignment:
Q  286 ttacaattca-atcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacc 371  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||||||| ||| ||||    
T  4557364 ttacaattcatatcaaaaacccaattt-gtcccccgtacgcacttcaaacaaaaacttcaaagcatagaccatctcttcattggtacc 4557450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 25043936 - 25044000
Alignment:
Q  77 tttgtccgaggattattgctctgataccataatgtaacgccccggattttgatccaagacattac 141  Q
    ||||||||||||||||||||||||||||||| |||||| ||||| ||||| |||||| |||||||    
T  25043936 tttgtccgaggattattgctctgataccatattgtaacaccccgaattttaatccaatacattac 25044000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 25674420 - 25674369
Alignment:
Q  112 aacgccccggattttgatccaagacattacgcctaaatcattttccttttct 163  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| ||||||    
T  25674420 aacgtcccggattttaatccaagacattacgcctaaatcattttcattttct 25674369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 282 - 390
Target Start/End: Complemental strand, 28202010 - 28201902
Alignment:
Q  282 aaagttacaattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagcaa-aacttcaaagcatagatcatctcttctttgatacctaaaatatt 380  Q
    |||||| ||||| ||||||||| ||||| || ||| | |||||| |||||||||| |||  ||||| ||| |||||||||||||| |||| |||||||||    
T  28202010 aaagtttcaatttaatcaaaaatccaatatcatcctc-gtacgcgcttcaagcaagaacaccaaagaatacatcatctcttctttaatacttaaaatatt 28201912  T
Q  381 agtgtaaggg 390  Q
     |||||||||    
T  28201911 ggtgtaaggg 28201902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 30910731 - 30910686
Alignment:
Q  206 ttagcaaagcctatacaaaattcttaacataatttaattaaaattc 251  Q
    ||||||||  ||||||||||||||||| |||||||||| |||||||    
T  30910731 ttagcaaaatctatacaaaattcttaatataatttaataaaaattc 30910686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 386; Significance: 0; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 109 - 599
Target Start/End: Complemental strand, 34637266 - 34636776
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  | ||    
T  34637266 tgtaacgccccagattttggtccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatctatattatat--tcta 34637169  T
Q  209 gcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaa 308  Q
    ||||| |||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34637168 gcaaaacctatacaaaattcttaacataatgtaattaaaactcttaaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaatccaa 34637069  T
Q  309 tttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaa 407  Q
    ||||||||||||||  |||||| ||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  34637068 tttcgtcccccgtatacacttccagcaaaaacttcaaagcatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaa 34636969  T
Q  408 attggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctttaag 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34636968 attggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaag 34636869  T
Q  507 gtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
     ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34636868 ataaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacacaaatgtataacagacccaatgcaatgcaatgatgt 34636776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 109 - 599
Target Start/End: Original strand, 32449393 - 32449883
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||    
T  32449393 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatat--tcta 32449490  T
Q  209 gcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaa 308  Q
    | ||| | ||||||||||||||||||| || ||||||||| |||| |||| | |||||||||||||||||||  ||||||||||||||||||||||||||    
T  32449491 gaaaaacttatacaaaattcttaacatgatgtaattaaaactcttaaacttaaatccttcaaaaatttctacctaagttacaattcaatcaaaaacccaa 32449590  T
Q  309 tttcgtcccccgtacgcacttcaagcaa-aacttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaa 407  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  32449591 tttcgtcccccgtacgcacttcaagcaagaacttcaatgcatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaa 32449690  T
Q  408 attggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctttaag 506  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32449691 attggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaag 32449790  T
Q  507 gtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  32449791 gtaaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacacaaatgtataacagactcaatccaatgcaatgatgt 32449883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 109 - 599
Target Start/End: Original strand, 23259757 - 23260266
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||| ||    
T  23259757 tgtaacgccccggattttgatctaagacattacgcctaaatcatttttcttttctgaaaaacactactatttatttatttcatcaata--atatattcta 23259854  T
Q  209 gcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttc-aaaaatttctactaaagttacaattcaatcaaaaaccca 307  Q
    ||||| |||||||||||||||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23259855 gcaaaacctatacaaaattcttaacataatgtaattaaaactcttaaactaatatccttcaaaaaatttctactaaagttacaattcaatcaaaaaccca 23259954  T
Q  308 atttcgtcccccgtacgcacttcaagc-aaaacttcaaagcatagatcatc--------------------tcttctttgatacctaaaatattagtgta 386  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||                    ||||||||| |||||||||| ||||||||    
T  23259955 atttcatcccccgtacgcacttcaagcaaaaacttcaaagcatagatcatctcttctttggtacctaaaattcttctttggtacctaaaatgttagtgta 23260054  T
Q  387 agggtcaatttccttatccaaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-a 485  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |    
T  23260055 agggtcaatttccttatccaaattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaataaaaaagaaataagaa 23260154  T
Q  486 aaatacatttaagtctttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatg 585  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||  ||||||||||| |||||||| ||||    
T  23260155 aaatacatttaagtatttaaggtaaagttcatacacatttcttttgtatatataacagtttaatcacttatca--acacagatgtaaaacagacctaatg 23260252  T
Q  586 caatgcaatgatgt 599  Q
    ||||| ||||||||    
T  23260253 caatgtaatgatgt 23260266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 109 - 498
Target Start/End: Original strand, 10750755 - 10751145
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatt-tcatcaataatatatatttt 207  Q
    |||||||||||  ||||| |||||||||||||| || || ||||  || ||||| |||||  ||||||||||  || || |||||||||||| || | ||    
T  10750755 tgtaacgccccaaattttaatccaagacattactccaaattcatgctcattttc-gaaaattactactattttctttttatcatcaataataaat-tctt 10750852  T
Q  208 agcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaaccca 307  Q
    ||||||   |||||||||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  10750853 agcaaaatttatacaaaattctttacataatttaattaaaactcttaaactaatatcattcaaaaatttctactgaagttacaattcaatcaaaaaccca 10750952  T
Q  308 atttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatcca 406  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  10750953 atttcgtcccccgtacgcacttcaagcaaaaacttcaaagcatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatcca 10751052  T
Q  407 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaag 498  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  10751053 aattggttcatactcaaagcacaagaacaatgccacataatagatagtatcaaaacttctcaataaaaaagaaataagaaaaatacatttaag 10751145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 109 - 489
Target Start/End: Original strand, 26181816 - 26182199
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaa----cactactatttatttatttcatcaataatatatat 204  Q
    |||||| |||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    ||||||||||||||||||| |||||||||| || |    
T  26181816 tgtaacaccccagattttgttccaagacattacgcctaaatcattttctttttctgaaaaaaaaacactactatttatttatttgatcaataataaat-t 26181914  T
Q  205 tttagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaac 304  Q
     |||||||| |||||||||||| ||| |||||||||||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26181915 cttagcaaaacctatacaaaatgcttgacataatttaattaaact-cttaaactaatatccttcaaaagtttctactaaagttacaattcaatcaaaaac 26182013  T
Q  305 ccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttat 403  Q
    ||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  26182014 ccaattttgttccccgtacgcacttcaagcaaaaacttcaaagcatagaccatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttat 26182113  T
Q  404 ccaaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaat 489  Q
    | |||||||||||||| ||||||||  |||||||| ||  ||||||||| || |||||||| |||||||||||||| |||||||||    
T  26182114 caaaattggttcatactcaaagcaccggaacaatgtcatgaaatagataatatcaaaacttatcaatcaaaaagaattaagaaaat 26182199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 108 - 599
Target Start/End: Complemental strand, 24164863 - 24164375
Alignment:
Q  108 atgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttt 207  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||| ||||   |||||  | ||||||| ||| | |||||||||||| || | ||    
T  24164863 atgtaacgccccggattttgatccaagacattatgcctaattcattttcatttttctaaaaatgccactatttttttttatcatcaataataaat-tctt 24164765  T
Q  208 agcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaa--c 304  Q
    |||||| |  |||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| | | | ||||| |||||||||||| |||||  |    
T  24164764 agcaaaac--atacaaaattcttaacataatttaataaaaattcttaaactaaatatccttcaaaattattt-ctaaaattacaattcaattaaaaaaac 24164668  T
Q  305 ccaatttcgtcccccgtacgcacttcaagcaaaacttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaaggg-tcaatttccttat 403  Q
    ||||||| |||||| | |||| ||||||    | |    ||||||| |  || |||| |||| |||||||||| || ||||||||| |||||||||||||    
T  24164667 ccaattttgtcccc-gcacgcgcttcaa----agc----aagcatacactatgtcttatttggtacctaaaatgttggtgtaaggggtcaatttccttat 24164577  T
Q  404 ccaaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagt--- 499  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||||||| ||||||||||||||||| || ||||||| |||||||||| ||||       
T  24164576 ccaaattggttcatactcaaagcacaagaacaatgtcataaaatagatagtatcaaaacttctcaatcaagaaaaaataagaaaaatacattaaagtcat 24164477  T
Q  500 ---ctttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatga 596  Q
       ||| ||||||||||| ||||||||||||||||  | ||||| |||||||||| ||||||||||| | |||||||||||||| ||||||||||||| |    
T  24164476 atgcttcaaggtaaagtttacacacatttcttttgcat-tataatagtttaatcaattatcaacacataaatgtataacagaccaaatgcaatgcaatta 24164378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 109 - 574
Target Start/End: Original strand, 13772546 - 13773006
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatt-tcatcaataatatatatttt 207  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||  || |||||  ||||  ||||||||||  || || |||||||||||| || | ||    
T  13772546 tgtaacgccccagattttgatccaagacattactcctaattcatgctcattttca-aaaattactactattttctttttatcatcaataataaat-tctt 13772643  T
Q  208 agcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaa-cc 305  Q
    ||||||  ||||||||||||||| || ||||||||| ||||||| | || ||| ||||||| |||| ||            ||||||| || ||||| ||    
T  13772644 agcaaaatctatacaaaattctttacgtaatttaataaaaattcctaaaataaatatcctttaaaattt------------acaattcgataaaaaaacc 13772731  T
Q  306 caatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatc 404  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  13772732 caattt-gtcccccgtacgcacttctagcaaaaacttcaaagcatagaccatctcttctttggtacctaaaatattagtgtaagagtcaatttccttatc 13772830  T
Q  405 caaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc--- 500  Q
    ||||||||||||||| ||||||||||| ||||||| || || ||||||| || ||||||||||||||||||||||  |||||||||||||  |||||       
T  13772831 caaattggttcatactcaaagcacaagaaacaatgtcataatatagataatatcaaaacttctcaatcaaaaagatttaagaaaatacatacaagtcata 13772930  T
Q  501 ---tttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataa 574  Q
       ||| | |||||||||| ||||||||||||||  | ||||| |||||||||||||||||||||||||||| ||||    
T  13772931 tgtttttaagtaaagttcatacacatttcttttgcat-tataatagtttaatcacttatcaacacacagatgaataa 13773006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 290 - 530
Target Start/End: Complemental strand, 20559693 - 20559456
Alignment:
Q  290 aattcaatcaaaaacccaatttc-gtcccccgtacgcacttcaagcaaaacttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaag 388  Q
    ||||| ||||||||||||||||  ||||||||  ||| |||||||||||||  ||||||||| | ||| |||||||||||||||||||| ||| ||||||    
T  20559693 aattcgatcaaaaacccaatttgtgtcccccgc-cgctcttcaagcaaaacaccaaagcatacaccatgtcttctttgatacctaaaatgttactgtaag 20559595  T
Q  389 ggtcaatttccttatccaaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaa 488  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||  ||||||||| || ||||||||||||||||||||||||||||||||    
T  20559594 ggtcaatttctttatccaaattggttcatactcaaagcacaagaacaatgcca-taaatagatactaccaaaacttctcaatcaaaaagaaataagaaaa 20559496  T
Q  489 tacatttaagtctttaaggtaaagttcacacacatttctttt 530  Q
    |  |||||||||||||||||||||| || |||||||||||||    
T  20559495 t--atttaagtctttaaggtaaagtgcatacacatttctttt 20559456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 19814712 - 19814818
Alignment:
Q  80 gtccgaggattattgctctgataccataatgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatt 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19814712 gtccgaggattattgctctgataccataatgtaacgccccggattttggtccaagacattacgcctaaatcattttccttttctgaaaaatactactatt 19814811  T
Q  180 tatttat 186  Q
    |||||||    
T  19814812 tatttat 19814818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 534 - 599
Target Start/End: Complemental strand, 20558148 - 20558083
Alignment:
Q  534 tatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  20558148 tatataacagtttaatcacttatcaacacacatatgtacaacagacccaatgcaatgcaatgatgt 20558083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 376 - 483
Target Start/End: Original strand, 11166045 - 11166153
Alignment:
Q  376 atattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaa-gaacaatgccacaaaatagatagtaacaaaacttctcaatcaaa 474  Q
    |||||| ||||||||||||||||| |||||||||||||||||||  |||||||||  ||||||||   |||||||||||||  ||| |||||| ||||||    
T  11166045 atattaatgtaagggtcaatttccgtatccaaattggttcatactgaaagcacaataaacaatgctctaaaatagatagtataaaatcttctcgatcaaa 11166144  T
Q  475 aagaaataa 483  Q
    |||||||||    
T  11166145 aagaaataa 11166153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 393 - 485
Target Start/End: Original strand, 31275943 - 31276036
Alignment:
Q  393 aatttccttatccaaattggttcatacccaaagcacaagaac-aatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataaga 485  Q
    |||||||||||||||||||||||||||  ||| ||| ||||  |||| || |||||||||| || ||||||||||| |||||||||||||||||    
T  31275943 aatttccttatccaaattggttcatacttaaaacacgagaaataatgtcataaaatagataatatcaaaacttctcgatcaaaaagaaataaga 31276036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 443 - 483
Target Start/End: Complemental strand, 31276892 - 31276852
Alignment:
Q  443 aaaatagatagtaacaaaacttctcaatcaaaaagaaataa 483  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  31276892 aaaatagatagtatcaaaacttctcaataaaaaagaaataa 31276852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 366
Target Start/End: Original strand, 31277966 - 31278108
Alignment:
Q  222 aaaattcttaacataatttaa-ttaaaattcttgaact-aatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtccccc 319  Q
    ||||||||||||||||||||| |||||||| || |||| ||||||||||||    ||||  |||| ||||||||||||||||| | ||| || || || |    
T  31277966 aaaattcttaacataatttaatttaaaattattaaactaaatatccttcaa----ttcttttaaaattacaattcaatcaaaacctcaaatttgt-cctc 31278060  T
Q  320 gtacgcacttcaag-caaaacttcaaagcatagatcatctcttctttg 366  Q
    |||||| | |||||  |||||  ||||||| | |||||||||||||||    
T  31278061 gtacgcgcatcaagtaaaaacaccaaagcaaacatcatctcttctttg 31278108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 11165776 - 11165808
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattac 141  Q
    ||||||||||| |||||||||||||||||||||    
T  11165776 tgtaacgccccagattttgatccaagacattac 11165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 141
Target Start/End: Complemental strand, 31875863 - 31875831
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattac 141  Q
    ||||||||| |||||||||||||||||||||||    
T  31875863 tgtaacgcctcggattttgatccaagacattac 31875831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 383; Significance: 0; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 108 - 599
Target Start/End: Complemental strand, 339187 - 338697
Alignment:
Q  108 atgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttt 207  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |    
T  339187 atgtaacgccccggattttggtccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatat--tct 339090  T
Q  208 agcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaaccca 307  Q
    ||||||  ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  339089 agcaaaatctatacaaaattcttaacataatgtaattaaaactcttaaactaatatccttcaaaa-tttctactcaagttacaattcaatcaaaaaccca 338991  T
Q  308 atttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatcca 406  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||    
T  338990 atttcgtcccccgtaagcacttcaagcaaaaacttcaaagtatagatcatctcttctttggtacctaaaatgttagtgcaagggtcaatttccttatcca 338891  T
Q  407 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctttaa 505  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  338890 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaacaagaaaaatacatttaagtctttaa 338791  T
Q  506 ggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  338790 ggtaaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacacagatgaataacagacccaatgcaatgcaatgatgt 338697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 109 - 599
Target Start/End: Original strand, 43406494 - 43406984
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||    
T  43406494 tgtaacgccccggattttggtccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatat--tcta 43406591  T
Q  209 gcaaagcctatacaaaattctt-aacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaaccca 307  Q
    |||||  ||||||||||||||| |||||||| ||||||||| |||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  43406592 gcaaaatctatacaaaattcttcaacataatgtaattaaaactcttaaactaatatccttcaaaa-tttctactcaagttacaattcaatcaaaaaccca 43406690  T
Q  308 atttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatcca 406  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||    
T  43406691 atttcgtcccctgtacgcacttcaagcaaaaacttcaaagcatagatcatctcttctttggtacctaaaatgttagtgcaagggtcaatttccttatcca 43406790  T
Q  407 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctttaa 505  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43406791 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaa 43406890  T
Q  506 ggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43406891 ggtaaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacacagatgaataacagacccaatgcaatgcaatgatgt 43406984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 109 - 599
Target Start/End: Original strand, 37666316 - 37666795
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||  | ||    
T  37666316 tgtaacgccccggattttgatccaagacattacgcctaaatcatttttcttttctgaaaa-cactactatttatttatttcattaataatatat--tcta 37666412  T
Q  209 gcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaa 308  Q
    ||||| ||||||||||| |||||||||||| |||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37666413 gcaaaacctatacaaaactcttaacataatgtaattaaaa--------ctaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaa 37666504  T
Q  309 tttcgtcccccgtacgcacttcaagcaaaacttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaaa 408  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  37666505 tttcgtcccccgtacgcacttcaagcaaaactacaaagcatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaa 37666604  T
Q  409 ttggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctttaagg 507  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  37666605 ttggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatc-aaaagaattaagaaaaatacatttaagtctttaagg 37666703  T
Q  508 taaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    ||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  37666704 taaagttcatacacatttcttttgtatatataaaagtttaatcacttatcaacacacatatgtataacagacccaatgcagtgcaatgatgt 37666795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 107 - 599
Target Start/End: Complemental strand, 6836968 - 6836487
Alignment:
Q  107 aatgtaacgccccggatttt-gatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatt-tcatcaataatatatat 204  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||  || || |||||||||||| || |    
T  6836968 aatgtaacgccccgtatttttgatccaagacattacgcctaaatcattttctttttctgaaaaaaactactattttctttttatcatcaataataaat-t 6836870  T
Q  205 tttagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaa 303  Q
     ||| ||||  ||||||||||||||| |||||||||||| ||||||| | || ||| ||||||| |||| ||            |||||||||| |||||    
T  6836869 cttaacaaaatctatacaaaattctttacataatttaataaaaattcctaaaataaatatcctttaaaattt------------acaattcaat-aaaaa 6836783  T
Q  304 cccaatttcgtccccc-gtacgcacttcaagcaaa-acttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttcctt 401  Q
    ||||||||  |||||| |||||||||||||||||| ||  ||||||||| | |||  |||||||| |||||||||| |||||||||||||||||||||||    
T  6836782 cccaatttgttccccccgtacgcacttcaagcaaacacaccaaagcatacaccattccttctttggtacctaaaatgttagtgtaagggtcaatttcctt 6836683  T
Q  402 atccaaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtc 500  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  6836682 atccaaattggttcatacttaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtc 6836583  T
Q  501 tttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||    
T  6836582 tttaaggtaaagttcatacacatttcttttgtatatataacagtttaat---ttatcaacacacagatgtataacagactcaatgcaatgcaatgatgt 6836487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 111 - 574
Target Start/End: Original strand, 35761147 - 35761627
Alignment:
Q  111 taacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaa-------aaacactactatttatttatttcatcaataatatata 203  Q
    |||||||||| |||||||||||||||||||||||||||| |||| | |||||||||       |||||||||||||||||||||||||||||||||||||    
T  35761147 taacgccccgaattttgatccaagacattacgcctaaattatttcctttttctgaagaaaaaaaaacactactatttatttatttcatcaataatatata 35761246  T
Q  204 tttt---agcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaa 300  Q
    | ||   ||||||  ||||||||||| ||| |||| |||||||||||| |||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  35761247 tattcttagcaaaaactatacaaaatgcttgacatgatttaattaaaactcttaaactaatatccttaaaaaatttatactaaagttacaattcaatcaa 35761346  T
Q  301 aaacccaatttcgtcccccgtacgcacttcaagc-aaaacttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttcc 399  Q
    ||| |||||||||||||||||||||||||||||| ||||||||||||||||||  || ||||||||| |||||||||| |||||||||||||||||||||    
T  35761347 aaatccaatttcgtcccccgtacgcacttcaagcaaaaacttcaaagcatagacaatatcttctttggtacctaaaatgttagtgtaagggtcaatttcc 35761446  T
Q  400 ttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaatacatttaag 498  Q
    |||||||||||||||||||| ||||||||||| ||| |||||| |||||||||  || |||||||||| |||||||||||  ||| |||||||||| |||    
T  35761447 ttatccaaattggttcatactcaaagcacaagaaaccatgccataaaatagatgatatcaaaacttctgaatcaaaaagatttaaaaaaatacattcaag 35761546  T
Q  499 t------ctttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataa 574  Q
    |      |||| | ||| |||||| ||||||||||||||  | ||||| |||||||||||||||||||||||||||| ||||    
T  35761547 tcatatgcttttaagtagagttcatacacatttcttttgcat-tataatagtttaatcacttatcaacacacagatgaataa 35761627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 290 - 574
Target Start/End: Original strand, 18472249 - 18472538
Alignment:
Q  290 aattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaag 388  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  18472249 aattcgatcaaaaacccaattt-gtcccccgtacacacttcaagcaaaaacttcaaagcatagaccatctcttctttggtatctaaaatattagtgtaag 18472347  T
Q  389 ggtcaatttccttatccaaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaa 488  Q
    ||||||||| ||||||||||||||||||||| |||||||| | ||||||| || ||||||||||||| ||||||||||||||||||||||  | ||||||    
T  18472348 ggtcaattttcttatccaaattggttcatactcaaagcaccaaaacaatgtcataaaatagatagtatcaaaacttctcaatcaaaaagattttagaaaa 18472447  T
Q  489 tacatttaagtc------tttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataa 574  Q
    |||||| |||||      ||| | |||||||||| ||||||||||||||  | ||||| |||||||||||||||||||||| ||||| ||||    
T  18472448 tacattcaagtcatatgtttttaagtaaagttcatacacatttcttttg-ctttataatagtttaatcacttatcaacacatagatgaataa 18472538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 108 - 272
Target Start/End: Original strand, 51442504 - 51442672
Alignment:
Q  108 atgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaa----acactactatttatttatttcatcaataatatata 203  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||    |||||||||||||||||||||||||||||||||||    
T  51442504 atgtaacgccccggattttgatccaagacattacgcctaaattattttctttttttgaaaaaaaaacactactatttatttatttcatcaataatatata 51442603  T
Q  204 ttttagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaa 272  Q
    || ||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  51442604 ttatagcaaaacctatacaaaattcttaacataatttaaataaaattcttaaactaatatccttcaaaa 51442672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 335 - 489
Target Start/End: Complemental strand, 8422411 - 8422256
Alignment:
Q  335 aaaacttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aa 433  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || ||    
T  8422411 aaaacttcaaagcatagaccatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaagcaccagaaa 8422312  T
Q  434 caatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaat 489  Q
    ||||| || |||||||||| || |||||||| |||||||||||||| |||||||||    
T  8422311 caatgtcataaaatagataatatcaaaacttatcaatcaaaaagaattaagaaaat 8422256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 376 - 589
Target Start/End: Original strand, 33007044 - 33007262
Alignment:
Q  376 atattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaa 474  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| |||||||| || ||||||| || |||||||||| || ||||||||||||||||||    
T  33007044 atattaatgtaagggtcaatttccttatccaaattgattcatactcaaagcaccagaaacaatgtcataaaatagataatatcaaaacttctcaatcaaa 33007143  T
Q  475 aagaaataagaaaa-tacatttaagt------ctttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacaga 567  Q
    |||||||||||||| |||||||||||      |||||||  ||| |||||||||||||   |||| | ||||| |||||||||||||||||||||||| |    
T  33007144 aagaaataagaaaagtacatttaagtcatatcctttaag--aaaattcacacacattttccttgtat-tataatagtttaatcacttatcaacacacaaa 33007240  T
Q  568 tgtataacagacccaatgcaat 589  Q
    | || ||| ||| |||||||||    
T  33007241 tatacaactgactcaatgcaat 33007262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 376 - 487
Target Start/End: Complemental strand, 24276199 - 24276088
Alignment:
Q  376 atattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaa 475  Q
    |||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| ||||||| | ||||||||||| |||||||    
T  24276199 atattaatgtaagggtcaatttctttatccaaattggttcatactcaaagtacaagaacaatgccacaaagtagatagcatcaaaacttctcgatcaaaa 24276100  T
Q  476 agaaataagaaa 487  Q
     |||||||||||    
T  24276099 ggaaataagaaa 24276088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 376 - 500
Target Start/End: Original strand, 19198193 - 19198321
Alignment:
Q  376 atattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaag---aacaatgccacaaaatagatagtaacaaaacttctcaatca 472  Q
    |||||| || |||||||||||||||||||||||||||||||||| |||||||||||   ||||||| || ||||||||||||| |||||||||||||| |    
T  19198193 atattaatgcaagggtcaatttccttatccaaattggttcatactcaaagcacaagataaacaatgtcataaaatagatagtatcaaaacttctcaatta 19198292  T
Q  473 aaaagaaataag-aaaatacatttaagtc 500  Q
    ||||||| |||| ||||||||||||||||    
T  19198293 aaaagaattaagaaaaatacatttaagtc 19198321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 376 - 483
Target Start/End: Original strand, 24055660 - 24055767
Alignment:
Q  376 atattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaa 475  Q
    |||||| |||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||  | ||||||||||| |||||||    
T  24055660 atattaatgtaggggtcaatttccttatccaaattggttgatactcaaagcacaagaacaatgccacaaagtagataacatcaaaacttctcgatcaaaa 24055759  T
Q  476 agaaataa 483  Q
     |||||||    
T  24055760 ggaaataa 24055767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 19197952 - 19198029
Alignment:
Q  111 taacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttattt 188  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||||| |||||  ||||||||||||||||||||||||    
T  19197952 taacgtcccggattttggtccaagacattacacctaaatcattttctttttcgtaaaaacactactatttatttattt 19198029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 122 - 253
Target Start/End: Original strand, 44781389 - 44781518
Alignment:
Q  122 attttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatattttagcaaagcctatac 221  Q
    |||||||||||| ||||||||||||| |||||||| ||||   |||| | || |||||| ||| | |||||||||||| || | ||| |||| |||||||    
T  44781389 attttgatccaaaacattacgcctaattcattttcatttttctaaaagcgctgctattttttt-tatcatcaataataaat-tcttaacaaaacctatac 44781486  T
Q  222 aaaattcttaacataatttaattaaaattctt 253  Q
    | ||||||||||||||||||||||||||||||    
T  44781487 acaattcttaacataatttaattaaaattctt 44781518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 109 - 199
Target Start/End: Original strand, 20147830 - 20147919
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataata 199  Q
    |||||||||||| |||||| |||||||||||||| ||||||||||||  ||||| | ||||||| | ||||||||||||||||||||||||    
T  20147830 tgtaacgccccgaattttggtccaagacattacgtctaaatcattttatttttccg-aaaacaccattatttatttatttcatcaataata 20147919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 377 - 476
Target Start/End: Complemental strand, 33009204 - 33009104
Alignment:
Q  377 tattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaa 475  Q
    ||||| ||||||||||||||| ||||||||||||||||||| | ||||||||||| ||||||| || ||| ||||||||| | ||||| ||| |||||||    
T  33009204 tattaatgtaagggtcaattttcttatccaaattggttcatgctcaaagcacaagaaacaatgtcataaagtagatagtatcgaaactactcgatcaaaa 33009105  T
Q  476 a 476  Q
    |    
T  33009104 a 33009104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 368 - 488
Target Start/End: Complemental strand, 16075525 - 16075403
Alignment:
Q  368 tacctaaaatattagtgtaaggg-tcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttc 465  Q
    |||||||||| || |||||| || ||||||||||||||||| ||||||||||| ||||||| ||| |||||||  | |||||||||  || |||||||||    
T  16075525 tacctaaaatgttggtgtaaaggctcaatttccttatccaagttggttcatactcaaagcagaagaaacaatgttataaaatagatgatatcaaaacttc 16075426  T
Q  466 tcaatcaaaaagaaataagaaaa 488  Q
    | ||| |||||||| ||||||||    
T  16075425 ttaataaaaaagaattaagaaaa 16075403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 376 - 483
Target Start/End: Complemental strand, 16111184 - 16111072
Alignment:
Q  376 atattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-----aacaatgccacaaaatagatagtaacaaaacttctcaat 470  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| ||||| |||||     ||||||| |  |||||||| ||||  ||||||| || ||    
T  16111184 atattaatgtaagggtcaattttcttatccaaattggttcatactcaaaggacaagaaataaacaatgtcttaaaatagacagtataaaaacttttcgat 16111085  T
Q  471 caaaaagaaataa 483  Q
    |||||||||||||    
T  16111084 caaaaagaaataa 16111072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 20600486 - 20600550
Alignment:
Q  77 tttgtccgaggattattgctctgataccataatgtaacgccccggattttgatccaagacattac 141  Q
    |||||||||||||||| |||||||||||||| ||||||||||| |||||| || |||||||||||    
T  20600486 tttgtccgaggattatcgctctgataccatattgtaacgccccagattttaattcaagacattac 20600550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 407 - 500
Target Start/End: Original strand, 9536769 - 9536864
Alignment:
Q  407 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtc 500  Q
    ||||||||||||| |||||||| |||| ||||| || |||||||||| || |||||||| |||||||||||||| |||| |||||||||| |||||    
T  9536769 aattggttcatactcaaagcactagaaacaatgtcataaaatagataatatcaaaacttatcaatcaaaaagaattaagaaaaatacattcaagtc 9536864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 25647883 - 25647809
Alignment:
Q  238 tttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaattt 311  Q
    |||||||||||||||| || ||| |||||||||||||| ||| |||||||| ||||| |||||||||||||||||    
T  25647883 tttaattaaaattcttaaattaaatatccttcaaaaatctcttctaaagttgcaattaaatcaaaaacccaattt 25647809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 33006887 - 33006972
Alignment:
Q  223 aaattcttaacataatttaattaaaattcttgaact-aatatccttcaaaaatttctactaaagttacaattcaatcaaaaaccca 307  Q
    |||||||| |||||||||||||||||||||| || | ||||||||| |||||| | | |||||| ||||||| |||||||||||||    
T  33006887 aaattctttacataatttaattaaaattcttaaaataaatatcctttaaaaatcttttctaaagatacaattaaatcaaaaaccca 33006972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 318
Target Start/End: Original strand, 19198065 - 19198137
Alignment:
Q  244 taaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccc 318  Q
    |||||||| | |||||||||||||| |||||| || ||||| |||||||||||| |||||||||||||| |||||    
T  19198065 taaaattcctaaactaatatccttc-aaaattacttctaaaattacaattcaat-aaaaacccaatttcatcccc 19198137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 15973929 - 15973884
Alignment:
Q  109 tgtaacgccccggattttg-atccaagacattacgcctaaatcatt 153  Q
    ||||||||||||||||||  |||||||||||||||||||| |||||    
T  15973929 tgtaacgccccggattttttatccaagacattacgcctaattcatt 15973884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 18472176 - 18472221
Alignment:
Q  206 ttagcaaagcctatacaaaattcttaacataatttaattaaaattc 251  Q
    ||||||||  |||||||||||| ||||||||||||||| |||||||    
T  18472176 ttagcaaaaactatacaaaatttttaacataatttaataaaaattc 18472221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 33006746 - 33006787
Alignment:
Q  120 ggattttgatccaagacattacgcctaaatcattttcctttt 161  Q
    |||||||| ||||||||||||||| |||||||||||| ||||    
T  33006746 ggattttggtccaagacattacgcataaatcattttcatttt 33006787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 141
Target Start/End: Complemental strand, 24276467 - 24276435
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattac 141  Q
    |||||||||||| ||||||||||||||||||||    
T  24276467 tgtaacgccccgaattttgatccaagacattac 24276435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 382; Significance: 0; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 109 - 599
Target Start/End: Complemental strand, 40448559 - 40448070
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  | ||    
T  40448559 tgtaacgccccggattttggtccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatgt--tcta 40448462  T
Q  209 gcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaa 308  Q
    |||||  ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  40448461 gcaaaatctatacaaaattcttaacataatgtaattaaaactcttaaactaatatccttcaaaa-tttctactcaagttacaattcaatcaaaaacccaa 40448363  T
Q  309 tttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaa 407  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||    
T  40448362 tttcgtcccccgtaagcacttcaagcaaaaacttcaaagtatagatcatctcttctttggtacctaaaatgttagtgcaagggtcaatttccttatccaa 40448263  T
Q  408 attggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctttaag 506  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40448262 attggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaag 40448163  T
Q  507 gtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  40448162 gtaaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacacagatgaataacagacccaatgcaatgcaatgatgt 40448070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 111 - 500
Target Start/End: Complemental strand, 44789589 - 44789194
Alignment:
Q  111 taacgccccggattttgatccaa-gacattacgcctaaatcattttccttttctgaaaaa-----cactactatttatttatttcatcaataatatatat 204  Q
    |||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||     |||||||||||||||||||||||||||||| || |    
T  44789589 taacaccccagattttgatccaaagacattacgcctaaatcattttctttttctgaaaaaaaaaacactactatttatttatttcatcaataataaat-t 44789491  T
Q  205 tttagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaac 304  Q
     |||||||| |||||||||||| ||| || || ||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  44789490 cttagcaaaacctatacaaaatgcttgacttattttaattaaaactcttaaactaatatccttcaaaagtttctactaaagttacaattcaattaaaaac 44789391  T
Q  305 ccaatttcgtcccccgtacgcacttcaagcaa-aacttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttat 403  Q
    ||||||| |||||  |||||||||||| |||| |||||||||||||||| ||  ||||||||| |||||||||| ||||||| |||||||||||||||||    
T  44789390 ccaattttgtcccatgtacgcacttcaggcaataacttcaaagcatagacca--tcttctttggtacctaaaatgttagtgtgagggtcaatttccttat 44789293  T
Q  404 ccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataa-gaaaatacatttaagtc 500  Q
    |||||||||||||||| ||||||||| | ||| ||| || |||||||||| || |||||||| |||||||| ||||| |||  |||||||||| |||||    
T  44789292 ccaaattggttcatactcaaagcacaggaaactatgtcataaaatagataatatcaaaacttatcaatcaacaagaattaataaaaatacattcaagtc 44789194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 107 - 590
Target Start/End: Original strand, 41339389 - 41339864
Alignment:
Q  107 aatgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatt-tcatcaataatatatatt 205  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||| || |||||  ||||  ||||||||||  || || |||||||||||| || |     
T  41339389 aatgtgacgccccggattttgatccaagacattacgcctaattcattctcattttca-aaaattactactattttctttttatcatcaataatacat-tc 41339486  T
Q  206 ttagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaac 304  Q
    |||| |||  |||||||||||||||||||||||||||| ||||||| | || ||| ||||||| |||| ||            ||||||| || ||||||    
T  41339487 ttagtaaaatctatacaaaattcttaacataatttaataaaaattcctaaaataaatatcctttaaaattt------------acaattcgataaaaaac 41339574  T
Q  305 ccaatttcgtcccccgtacgcacttcaagcaaaa--cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttcctta 402  Q
    | ||||| ||||||| ||||||||||||||||||  ||||||||||| || ||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  41339575 ctaattt-gtcccccatacgcacttcaagcaaaaaacttcaaagcatggaccatcttttctttcgtacctaaaatattagtgtaagggtcaatttcctta 41339673  T
Q  403 tccaaattggttcatacccaaa-gcacaagaa-caatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagt 499  Q
    ||||||||||||||||| |||| |||| | || ||| | || ||| |||||| || |||||||| ||||| |||||||||||| |||| |||||||||||    
T  41339674 tccaaattggttcatactcaaaagcaccataaacaaagtcataaagtagataatatcaaaacttatcaataaaaaagaaataataaaaatacatttaagt 41339773  T
Q  500 ctttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatg 590  Q
    ||||||||||||||||| ||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  41339774 ctttaaggtaaagttcatacacatttcttttgtatatataaaaatttaatcacttatcaacacacagatgtataacagacccaatgcaatg 41339864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 107 - 492
Target Start/End: Original strand, 34396977 - 34397365
Alignment:
Q  107 aatgtaacgccccggattttgatccaag-acattacgcctaaatcattttccttttctgaaaaaca--ctactatttatttatttcatcaataatatata 203  Q
    ||||||||||| | |||||||||||||| ||||||||||||||| |||||  ||| |||||||| |  ||||||||||||||||||||||||||||  |     
T  34396977 aatgtaacgcctcagattttgatccaaggacattacgcctaaattatttttttttcctgaaaaaaaaactactatttatttatttcatcaataataagt- 34397075  T
Q  204 ttttagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaa 303  Q
    | |||| |||  ||||| ||||||||| |||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||| | ||||||||||    
T  34397076 tcttagtaaaatctatataaaattcttgacataatttaat-aaaactcttaaactaatatccttcaaaaatttctactaaagttacattccaatcaaaaa 34397174  T
Q  304 cccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttcctta 402  Q
    | |||||| || ||||||||| ||||||||||||| |||||||||  ||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  34397175 ctcaattttgttccccgtacgtacttcaagcaaaaacttcaaagctcagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttcctta 34397274  T
Q  403 tccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaataca 492  Q
    | ||||||| ||||||| |||||||| || ||||||| ||  ||||||||| || |||||||| |||||||||||||| ||||||||||||    
T  34397275 ttcaaattgattcatactcaaagcaccagaaacaatgtcatgaaatagataatatcaaaacttatcaatcaaaaagaattaagaaaataca 34397365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 117 - 500
Target Start/End: Original strand, 40728576 - 40728947
Alignment:
Q  117 cccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatt-tcatcaataatatatattttagcaaagc 215  Q
    |||| |||||||||||||||||||| ||||| ||||| || ||||| |||||  ||||||||||  || |  |||||||||||| || | ||||||||      
T  40728576 cccgaattttgatccaagacattactcctaattcattctcattttc-gaaaattactactattttcttttcatcatcaataataaat-tcttagcaaaat 40728673  T
Q  216 ctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgt 314  Q
    |||||||||||||||||||||||||||| ||||||| | || ||| |||| || |||| ||            ||||||| |||||||||||||||| ||    
T  40728674 ctatacaaaattcttaacataatttaataaaaattcctaaaataaatatcgtttaaaattt------------acaattcgatcaaaaacccaattt-gt 40728760  T
Q  315 cccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaaattggt 413  Q
    |||||||||||||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  40728761 cccccgtacgcacttcaagcaaaaacttcaaagcatagactatctcttctttggtacctaaaatattagtgtaagggtcaatttccttattcaaattggt 40728860  T
Q  414 tcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc 500  Q
    |||||| |||||||| | ||||||| || ||||||||||||| ||||||||||||||||||||||  |||||||||||||| |||||    
T  40728861 tcatactcaaagcaccaaaacaatgtcataaaatagatagtatcaaaacttctcaatcaaaaagatttaagaaaatacattcaagtc 40728947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 286 - 574
Target Start/End: Original strand, 35670071 - 35670364
Alignment:
Q  286 ttacaattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtg 384  Q
    ||||||||| || ||||||| ||||| |||||||| ||||||||||||||||| |||||||||||| | ||||||||||||| |||||||||||||||||    
T  35670071 ttacaattcgat-aaaaacctaattt-gtcccccgaacgcacttcaagcaaaaacttcaaagcatataccatctcttctttggtacctaaaatattagtg 35670168  T
Q  385 taagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataa 483  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| || ||||||||||||| ||||||||||||||||||||||  |||    
T  35670169 taagggtcaatttccttatccaaattggttcctactcaaagcacaagaaacaatgtcataaaatagatagtatcaaaacttctcaatcaaaaagatttaa 35670268  T
Q  484 gaaaatacatttaagtc------tttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataa 574  Q
    ||||||||||| |||||      ||| | |||||||||| |||||||||||||| || ||||| |||||||||| ||||||||||||||||| ||||    
T  35670269 gaaaatacattcaagtcatatgtttttaagtaaagttcatacacatttcttttgcgt-tataatagtttaatcagttatcaacacacagatgaataa 35670364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 109 - 591
Target Start/End: Original strand, 12773566 - 12774048
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttattt----catcaataatatatat 204  Q
    |||||||| |||||||||||||||||||||||||  |||||||||||  ||||  ||||| ||||||||||||||  |||    ||||||||||| || |    
T  12773566 tgtaacgctccggattttgatccaagacattacgtttaaatcattttattttttcgaaaatcactactatttattattttttatcatcaataataaattt 12773665  T
Q  205 ttt---agcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaa 300  Q
    |||   |  |||  |||||||||||||||||||||||||||||||||||||  |||||| |||||||||||| | | |  |||  ||||||||||||       
T  12773666 tttttaaaaaaaaactatacaaaattcttaacataatttaattaaaattctcaaactaaatatccttcaaaattatttt-taagattacaattcaat--- 12773761  T
Q  301 aaacccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttcc 399  Q
             |||||||||    ||| |||||||||||| |  | ||||||| |  |||||||||||| |||||||||  |||||||||| |||||||| |    
T  12773762 ---------ttcgtccccg---cgcgcttcaagcaaaaacaccgaagcatacactatctcttctttggtacctaaaaggttagtgtaagtgtcaattttc 12773849  T
Q  400 ttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaa 497  Q
    |||||||||||||||||||| ||||||||||| ||||||| || || |||||||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  12773850 ttatccaaattggttcatactcaaagcacaagaaacaatgtcataagatagatagtaccaaaacttctcaatcaaaaagaattaagaaaaatacatttaa 12773949  T
Q  498 g------tctttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgc 591  Q
    |      |||||||||||||||||||||||||||| ||||| | ||||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  12773950 gtcatattctttaaggtaaagttcacacacatttcctttgtat-tataatagtttaatcacttatcaacacacaaatgcataacagactcaatgcaatgc 12774048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 129 - 500
Target Start/End: Original strand, 18291901 - 18292262
Alignment:
Q  129 tccaagacattacgcctaaatcattttccttttctgaaaaacactactatttattt--atttcatcaataatatatattttagcaaagcctatacaaaat 226  Q
    ||||||||| |||| |||| |||||| | ||||  |||||||| |||||||| |||  |||||||||||| || || | ||||||||  ||||||||| |    
T  18291901 tccaagacactacgtctaattcatttccatttttcgaaaaacagtactatttttttttatttcatcaatagtaaat-tcttagcaaaatctatacaaagt 18291999  T
Q  227 tcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtacgc 325  Q
    ||||||||||||||||| ||||||||| || ||| ||||||  || |             ||||||||| ||||||| ||||||||  |||||| || ||    
T  18292000 tcttaacataatttaatgaaaattcttaaaataaatatcctataaca-------------ttacaattcgatcaaaa-cccaattta-tcccccatatgc 18292084  T
Q  326 acttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaaattggttcatacccaaa 424  Q
    ||||||||||||| |||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||    
T  18292085 acttcaagcaaaaacttcaaagcataaatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatcctcaaa 18292184  T
Q  425 gcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtc 500  Q
    |||| || ||||||| ||  ||||||||| || |||||||| |||||||||||||| |||| |||||||||| |||||    
T  18292185 gcaccagaaacaatgtcatgaaatagataatatcaaaacttatcaatcaaaaagaattaagaaaaatacattcaagtc 18292262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 109 - 264
Target Start/End: Original strand, 32735251 - 32735403
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    |||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||    
T  32735251 tgtaacgccccgaattttggtccaagacatttcgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaata--atatattcta 32735348  T
Q  209 gcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatc 264  Q
    ||||| ||||||||||||||||||||| || ||||| ||| |||| ||||||||||    
T  32735349 gcaaaacctatacaaaattcttaacatcatgtaatt-aaactcttaaactaatatc 32735403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 376 - 531
Target Start/End: Original strand, 28266544 - 28266705
Alignment:
Q  376 atattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaa 474  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||| || ||||||| || |||||||| | || ||| ||||||||||||||    
T  28266544 atattaatgtaagggtcaatttccttatccaaattggttcatactcaaagcaccagaaacaatgtcataaaatagacaatatcaacacttctcaatcaaa 28266643  T
Q  475 aagaaataagaaaatacatttaag------tctttaaggtaaagttcacacacatttcttttg 531  Q
    ||||| |||||||||||||| |||      ||||||| |||||||||||||||||||| ||||    
T  28266644 aagaattaagaaaatacattcaagtcatattctttaa-gtaaagttcacacacatttcatttg 28266705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 123 - 302
Target Start/End: Original strand, 28266290 - 28266470
Alignment:
Q  123 ttttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatt-tcatcaataatatatattttagcaaagcctatac 221  Q
    |||| ||||||||||  |||||||| ||||| || ||||  ||||||||||| | ||| | | || ||||||||||||  | | |||||||| |||||||    
T  28266290 tttttatccaagacaccacgcctaattcattctcatttttcgaaaaacactattgtttttattttatcatcaataataact-tgttagcaaaacctatac 28266388  T
Q  222 aaaattcttaacataatttaattaaaattcttgaact-aatatccttcaaaaatttctactaaagttacaattcaatcaaaa 302  Q
    || ||||||||||||||||||||||||||||| || | |||||||||||||||||||| |||||||||||||| ||| ||||    
T  28266389 aagattcttaacataatttaattaaaattcttaaaataaatatccttcaaaaatttcttctaaagttacaatttaattaaaa 28266470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 376 - 492
Target Start/End: Original strand, 23827782 - 23827899
Alignment:
Q  376 atattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaa 474  Q
    |||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||   |||||||||||||  ||| |||||| ||||||    
T  23827782 atattaatgtaagggttaatttccttatccaaattggttcatactcaaagcacaagaaacaatgctctaaaatagatagtataaaatcttctcgatcaaa 23827881  T
Q  475 aagaaataagaaaataca 492  Q
    ||||||||| || |||||    
T  23827882 aagaaataaaaatataca 23827899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 290 - 488
Target Start/End: Complemental strand, 29271482 - 29271283
Alignment:
Q  290 aattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaacttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagg 389  Q
    ||||||||||| ||||||||||| ||| |  ||||| ||||||| |||||  |||| |||| | | | |||||||||||||||||||| || ||||| ||    
T  29271482 aattcaatcaataacccaatttcatccaca-tacgcgcttcaaggaaaacaccaaatcatacaccgtatcttctttgatacctaaaatgttggtgtatgg 29271384  T
Q  390 g-tcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaa 487  Q
    | ||||||||||| |||||||||||||||||  |||||||||| |||| || |  |||||||||| || ||||| |||||||||||| |  |||||||||    
T  29271383 gctcaatttccttgtccaaattggttcatactaaaagcacaagaaacagtgtcgtaaaatagataatatcaaaaattctcaatcaaacatgaataagaaa 29271284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 19713477 - 19713542
Alignment:
Q  76 atttgtccgaggattattgctctgataccataatgtaacgccccggattttgatccaagacattac 141  Q
    |||| ||||||||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||    
T  19713477 atttttccgaggattattgctctgataccatattataacgcctcggattttaatccaagacattac 19713542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 483
Target Start/End: Complemental strand, 11387755 - 11387647
Alignment:
Q  376 atattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaa-gaacaatgccacaaaatagatagtaacaaaacttctcaatcaaa 474  Q
    |||||| | ||||||| ||||| ||||||||||||||||||||| ||||||||||  ||||||     |||||||||| ||  ||| |||||| ||||||    
T  11387755 atattaatataagggttaattttcttatccaaattggttcatactcaaagcacaataaacaatattctaaaatagataatataaaatcttctcgatcaaa 11387656  T
Q  475 aagaaataa 483  Q
    |||||||||    
T  11387655 aagaaataa 11387647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 93 - 140
Target Start/End: Complemental strand, 11388074 - 11388027
Alignment:
Q  93 tgctctgataccataatgtaacgccccggattttgatccaagacatta 140  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||||||    
T  11388074 tgctctgataccataatgtaatgccccagattttcatccaagacatta 11388027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 35669623 - 35669676
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttc 162  Q
    |||||||||| |||||||||| ||||||||||||||||| ||||| || |||||    
T  35669623 tgtaacgccctggattttgattcaagacattacgcctaattcattctcattttc 35669676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 19703916 - 19703948
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattac 141  Q
    |||||||||||||||||| ||||||||||||||    
T  19703916 tgtaacgccccggattttaatccaagacattac 19703948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 375; Significance: 0; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 109 - 599
Target Start/End: Complemental strand, 40460029 - 40459540
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||    
T  40460029 tgtaacgccccggattttggtccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatat--tcta 40459932  T
Q  209 gcaaagcctatacaaaattctt-aacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaaccca 307  Q
    |||||  ||||||||||||||| |||||||| |||||||| | ||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  40459931 gcaaaatctatacaaaattcttcaacataatgtaattaaact-cttaaactaatatccttcaaaa-tttctactcaagttacaattcaatcaaaaaccca 40459834  T
Q  308 atttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatcca 406  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||    
T  40459833 atttcgtcccctgtacgcacttcaagcaaaaacttcaaagcatagatcatctcttctttggtacctaaaatgttagtgcaagggtcaatttccttatcca 40459734  T
Q  407 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctttaa 505  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40459733 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaa 40459634  T
Q  506 ggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  40459633 ggtaaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacacagatgaataacagacccaatgcaatgcaatgatgt 40459540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 122 - 500
Target Start/End: Original strand, 28968374 - 28968757
Alignment:
Q  122 attttgatccaagacattacgcctaaatcattttccttttctgaaaaa--cactactatttatttatttcatcaataatatatattttagcaaagcctat 219  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||| |||||| || | |||||||| |||||    
T  28968374 attttgatccaagatattacgtctaaatcattttctttttctgaaaaaaacactactatttatttatttcatcgataataaat-tcttagcaaaacctat 28968472  T
Q  220 acaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaa-cccaatttcgtcccc 318  Q
    ||||||| ||| ||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||    
T  28968473 acaaaatgcttgacataatttaattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaatccaaattttgtcccc 28968572  T
Q  319 cgtacgcacttcaagc-aaaacttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaaattggttcat 417  Q
    |||| ||||||||||| |||||||||||||||||| ||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  28968573 cgtatgcacttcaagcaaaaacttcaaagcatagaccatcttttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttgat 28968672  T
Q  418 acccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtc 500  Q
    || ||||||||||| ||||||  || |||||||||| || ||||||||  |||| |||| ||| |||| |||||||||| |||||    
T  28968673 actcaaagcacaagaaacaatctcataaaatagataatatcaaaacttaccaataaaaacgaattaagaaaaatacattcaagtc 28968757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 210 - 500
Target Start/End: Complemental strand, 70278 - 69990
Alignment:
Q  210 caaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaat 309  Q
    |||| |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||| || || ||||| |||||||||||| |||||| ||||    
T  70278 caaaacctatacaaaattcttaacataatgtaattaaaattcttaaactaatatcattcaaaa-ttacttctaaaattacaattcaat-aaaaactcaat 70181  T
Q  310 ttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaaa 408  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| || ||||||| ||||||||||| ||||||||||||||||||    
T  70180 ttcgtcccccgtacgcacttcaagcaaaaacttcaaagcatagaccatctcttctttggtatctaaaatgttagtgtaaggatcaatttccttatccaaa 70081  T
Q  409 ttggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc 500  Q
    ||||||||||| | |||||| || ||| ||| || |||||||||| || ||||||||||||||| ||||||  |||||||||||||| |||||    
T  70080 ttggttcatactc-aagcaccagaaactatgtcataaaatagataatatcaaaacttctcaatc-aaaagatttaagaaaatacattcaagtc 69990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 109 - 563
Target Start/End: Original strand, 2761219 - 2761677
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttc-cttttct--gaaaaacactactatttatttatttcatcaataatatatatt 205  Q
    ||||||||  || ||||||||| ||||||||||| |||| ||||||||  ||||||   |||||| |||||||||  || | |||||||||||| || |     
T  2761219 tgtaacgcttcgaattttgatc-aagacattacgtctaattcattttcatttttctaaaaaaaacgctactattttattttatcatcaataataaat-tc 2761316  T
Q  206 ttagcaaagcctatacaaaattcttaacataatttaatt-aaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaac 304  Q
    ||||||||  |||||||||||| || ||||||||||||| ||||||||| ||||| |||||||| |||||| || ||||  ||| |||||||| ||||||    
T  2761317 ttagcaaaatctatacaaaattatt-acataatttaattaaaaattcttaaactactatccttc-aaaattacttctaatattaaaattcaat-aaaaac 2761413  T
Q  305 ccaatttcgtcccccgtacgcacttcaagc-aaaacttcaaagcatagatcatctcttctttgatacctaaaatatta--gtgtaagggtcaatttcctt 401  Q
    |||||||||| || ||||||| |||||||| |||||  ||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  2761414 ccaatttcgt-cctcgtacgcgcttcaagcaaaaacaccaaagcatacaccatgtcttctttgatacctaaaatattagtgtgtaagggtcaatttcctt 2761512  T
Q  402 atccaaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagt- 499  Q
    |||||||||||||||||| |||||||||||   ||||||| ||||||||||||| | |||||||||||||||||||||||||| |||||||||| || |     
T  2761513 atccaaattggttcatactcaaagcacaag---aatgccataaaatagatagtatctaaacttctcaatcaaaaagaaataagaaaaatacattcaaatc 2761609  T
Q  500 -----ctttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacaca 563  Q
         |||| | |||||||||| ||||||||||||||  |  |||| ||||||||||||||||||||||    
T  2761610 atatgcttttaagtaaagttcatacacatttcttttgcat-cataatagtttaatcacttatcaacaca 2761677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 296 - 599
Target Start/End: Complemental strand, 49499950 - 49499643
Alignment:
Q  296 atcaaaaacccaatttcgtcccccgtacgcacttcaagc--aaaacttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtca 393  Q
    ||||||||| |||||| ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||   ||||||||| |||||||||||||||    
T  49499950 atcaaaaactcaattt-gtcccccgtacgcacttcaagcgaaaaacttcaaagcatagaccatctcttctttagcacctaaaatgttagtgtaagggtca 49499852  T
Q  394 atttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatac 491  Q
    ||||||||||||||||| |||||||| | |||||| || ||||||| || |||||||||  || |||||||||||||| ||||||||||||| |||||||    
T  49499851 atttccttatccaaattagttcatactc-aagcaccagaaacaatgtcataaaatagatcatatcaaaacttctcaattaaaaagaaataagaaaaatac 49499753  T
Q  492 atttaagt------ctttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatg 585  Q
    ||| ||||      ||||||  ||| ||||||||| ||||||||||  | ||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  49499752 attcaagttatatgctttaa--taaggttcacaca-atttcttttg-ctttataatagtttaatcacttatcaacacacaaatgtataacagacccaatg 49499657  T
Q  586 caatgcaatgatgt 599  Q
    ||||||||| ||||    
T  49499656 caatgcaattatgt 49499643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 55163082 - 55162891
Alignment:
Q  299 aaaaacccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaattt 397  Q
    ||||||||||||| || | |||||| ||||||||| |||| |||||||||||||| ||||||||||||| | |||||||| |||||||||||||||||||    
T  55163082 aaaaacccaattt-gttcgccgtacacacttcaagtaaaaacttcaaagcatagaccatctcttctttggtgcctaaaatgttagtgtaagggtcaattt 55162984  T
Q  398 ccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaat 489  Q
    |||||||||||||||||||||| |||||||| || ||||||| || |||||||||| || |||||||| |||||||||||||| |||||||||    
T  55162983 ccttatccaaattggttcatactcaaagcaccagaaacaatgtcataaaatagataatatcaaaacttatcaatcaaaaagaattaagaaaat 55162891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 206 - 376
Target Start/End: Original strand, 42898238 - 42898406
Alignment:
Q  206 ttagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaac 304  Q
    |||||| | ||||||||| ||||||||||||||||||| ||||||||| |||||| ||||| || ||||||||  ||||| |||||| ||||||||||||    
T  42898238 ttagcacaacctatacaagattcttaacataatttaataaaaattcttaaactaattatccatc-aaaatttcatctaaaattacaactcaatcaaaaac 42898336  T
Q  305 ccaatttcgtcccccgtacgcacttcaagcaaa-acttcaaagcatagatcatctcttctttgatacctaaaa 376  Q
    |||||||     |||||||||||||||||||||  ||||||||| |||| |||||||||||| ||||||||||    
T  42898337 ccaattt--atacccgtacgcacttcaagcaaacgcttcaaagcgtaga-catctcttctttaatacctaaaa 42898406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 376 - 492
Target Start/End: Complemental strand, 10276862 - 10276745
Alignment:
Q  376 atattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaa 474  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||   |||||||||||||  ||| |||||| ||||||    
T  10276862 atattaatgtaagggtcaatttccttatacaaattggttcatactcaaagcacaagaaacaatgctctaaaatagatagtataaaatcttctcgatcaaa 10276763  T
Q  475 aagaaataagaaaataca 492  Q
    ||||||||| || |||||    
T  10276762 aagaaataaaaatataca 10276745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 34827863 - 34827965
Alignment:
Q  79 tgtccgaggattattgctctgataccataatgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctg-aaaaacactacta 177  Q
    |||||||||| ||||||| |||||||||||||||||| | | ||||||||| |||||||||||||  || |||||||| |||| || |||||||||||||    
T  34827863 tgtccgaggactattgctatgataccataatgtaacgtctcagattttgattcaagacattacgctaaattcattttcattttttgaaaaaacactacta 34827962  T
Q  178 ttt 180  Q
    |||    
T  34827963 ttt 34827965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 400 - 485
Target Start/End: Complemental strand, 41869458 - 41869372
Alignment:
Q  400 ttatccaaattggttcatacccaaagcacaagaac-aatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataaga 485  Q
    ||||||||||| |||||||| |||||||||||||  |||| ||| ||||||||| || |||||||||||||||||||||||||||||    
T  41869458 ttatccaaattagttcatactcaaagcacaagaaataatgtcacgaaatagataatatcaaaacttctcaatcaaaaagaaataaga 41869372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 70341 - 70297
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcatt 153  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  70341 tgtaacgccccggattttggtccaagacattacgcctaaatcatt 70297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 41951146 - 41951218
Alignment:
Q  76 atttgtccgaggattattgctctgataccataatgtaacgccccggatttt-gatccaagacattacgcctaa 147  Q
    ||||||||||||| ||||||||| |||||||||||||||  ||||||||||  ||||||||||||||| ||||    
T  41951146 atttgtccgaggactattgctcttataccataatgtaacatcccggattttaaatccaagacattacgtctaa 41951218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 19665190 - 19665239
Alignment:
Q  129 tccaagacattacgcctaaatcattttccttttctgaaaaacactactattt 180  Q
    |||||||||||||||||||||||||||  |||| | |||| |||||||||||    
T  19665190 tccaagacattacgcctaaatcatttt--ttttttaaaaatcactactattt 19665239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 373; Significance: 0; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 109 - 597
Target Start/End: Original strand, 46403725 - 46404216
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  | ||    
T  46403725 tgtaacgccccagattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatctatattatat--tcta 46403822  T
Q  209 gcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaa--atttctactaaagttacaattcaatcaaaaaccc 306  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||||  |||||||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  46403823 gcaaaacctatacaaaattcttaacataatgtaattaaaactcttatactaatatccttcaaaataattactactaaagttacaattcaatcaaaaaccc 46403922  T
Q  307 aatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatcc 405  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  46403923 aatttcgtcccccgtacgcacttcaagcaaaaacttcaaagcatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatcc 46404022  T
Q  406 aaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaatacatttaagtctttaa 505  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46404023 aaattggttcatactcaaagcacaagaacaatgccataaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaagtctttaa 46404122  T
Q  506 ggtaaagttcacacacatttcttttgtgtatat--aacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgat 597  Q
    ||||||||||| ||||||||| ||||| |||||  ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  46404123 ggtaaagttcatacacatttcctttgtatatatacaacagtttaatcatttatcaacagacagatgtataacagacccaatgcaatgcaatgat 46404216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 108 - 599
Target Start/End: Complemental strand, 16976399 - 16975909
Alignment:
Q  108 atgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaa-cactactatttatttatttcatcaataatatatattt 206  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||  |     
T  16976399 atgtaacgccccggattttggtccaagacattactcctaaatcattttccttttctaaaaaaacactgctatttatttatttcatcaataatatat--tc 16976302  T
Q  207 tagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaaccc 306  Q
    |||| || |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16976301 tagccaaacctatacaaaattcttaacataatgtaattaaaactcttaaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaactc 16976202  T
Q  307 aatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatcc 405  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  16976201 aatttcgtcccccgtacgcacttcaagcaaaaacttcaaagcatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatcc 16976102  T
Q  406 aaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtcttta 504  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16976101 aaattggttcatactcaaaacacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtcttta 16976002  T
Q  505 aggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||    
T  16976001 aggtaaagttcatacacatttattttgtatatataacagtttaatcacttatca--acacagatgtataatagacccaatgcaatgcaatgatgt 16975909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 109 - 599
Target Start/End: Original strand, 5003856 - 5004348
Alignment:
Q  109 tgtaacgccccggattttgatccaagacatt-acgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttt 207  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||  | |    
T  5003856 tgtaacgccccggattttggtccaagacatttacgcctaaatcattttccttttctaaaaaacactactatttatttatttcatctatattatat--tct 5003953  T
Q  208 agcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaaccca 307  Q
    |||||| ||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5003954 agcaaaacctatacaaaatttttaacataatgtaattaaaactctt-aactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaaccca 5004052  T
Q  308 atttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatcca 406  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||    
T  5004053 atttcgtcccccgtacgcacttcaagcaaaaacttcaaagcatagatcatctcttatttggtacctaaaatgttagtgtaagggtcaatttccttatcca 5004152  T
Q  407 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctttaa 505  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5004153 aattggttcatactcaaagcacaagaacaataccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaa 5004252  T
Q  506 ggtaaagttcacacacatttcttttgtgtat--ataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    ||||||||||| ||||||||| || || |||  ||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  5004253 ggtaaagttcatacacatttccttggtatatacataacagtttaatcatttatcaacacacagatgtattatagacccaatgcaatgcaatgatgt 5004348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 117 - 599
Target Start/End: Original strand, 7335826 - 7336311
Alignment:
Q  117 cccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatattttagcaaagcc 216  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  | ||||||| ||    
T  7335826 cccggattttggtccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatctatattatat--tctagcaaaacc 7335923  T
Q  217 tatacaaaattcttaacataatttaa--ttaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgt 314  Q
    ||||||||||||||||| ||||| ||  |||||| || | |||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  7335924 tatacaaaattcttaacgtaattaaaacttaaaactcgtaaactaagatccttcaaaa-tttctactaaagttacaattcaatcacaaacccaatttcgt 7336022  T
Q  315 cccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaaattggt 413  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  7336023 cccccgtacgcacttcaagcaaaaacttcaaagcataaatcatctcttctttgttacctaaaatgttagtgtaagggtcaatttccttatccaaattggt 7336122  T
Q  414 tcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctttaaggtaaag 512  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7336123 tcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaaggtaaag 7336222  T
Q  513 ttcacacacatttcttttg--tgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    |||| ||||||||| ||||  | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7336223 ttcatacacatttcctttgtatatatataacagtttaatcatttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 7336311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 109 - 590
Target Start/End: Complemental strand, 9105168 - 9104696
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaac-actactatttatttatt-tcatcaataatatatattt 206  Q
    ||||||||||| ||||||| ||||||||||||||||| | |||||  | ||||  ||||||| ||||||||||  || || |||||||||||| || | |    
T  9105168 tgtaacgccccagattttggtccaagacattacgccttattcattcacatttttcgaaaaactactactattttctttttatcatcaataataaat-tct 9105070  T
Q  207 tagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaacc 305  Q
    |||||||  |||||||||||||||| ||||||||||| ||||||| | || ||| ||||||| |||| ||            ||||||| ||  ||||||    
T  9105069 tagcaaaatctatacaaaattcttagcataatttaataaaaattcctaaaataaatatcctttaaaattt------------acaattcgatttaaaacc 9104982  T
Q  306 caatttcgtcccccgtacgcacttcaagca-aaacttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatc 404  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  9104981 caattt-gtcccccgtacgcacttcaagcagaaacttcaaagcatagacaatctcttctttggtacctaaaatattagtgcaaggatcaatttccttatc 9104883  T
Q  405 caaattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctt 502  Q
    ||||||||||||||| ||||||||||||| |||||||| |||||| |||||| | |||||||||||||||||||||||||||||| ||||||||||| ||    
T  9104882 caaattggttcatactcaaagcacaagaaacaatgccataaaataaatagtatcgaaacttctcaatcaaaaagaaataagaaaaatacatttaagt-tt 9104784  T
Q  503 taaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatg 590  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9104783 taaggtaaagttcatacacatttctgttgtatatataacagtttaatcacttatcaacacacatatgtataacagacccaatgcaatg 9104696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 109 - 488
Target Start/End: Original strand, 43277168 - 43277548
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttattt-catcaataatatatatttt 207  Q
    ||||||||| | ||||||||||||| ||||||| ||||| ||||| || |||||  ||||  |||||||||| ||| ||| ||||||||||| || | ||    
T  43277168 tgtaacgcctcagattttgatccaatacattactcctaattcattctcattttca-aaaattactactattttttttttttcatcaataataaat-tctt 43277265  T
Q  208 agcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaat-atccttcaaaaatttctactaaagttacaattcaatcaaaaaccc 306  Q
    ||||||  |||||||||||||||||||| |||||| |||||||||| || |||| ||||||||||||||| | |||||||||||||||||||||||||||    
T  43277266 agcaaaatctatacaaaattcttaacatcatttaactaaaattcttaaaataattatccttcaaaaatttattctaaagttacaattcaatcaaaaaccc 43277365  T
Q  307 aatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatcc 405  Q
    || || || ||||||||||||||||||||||| |  ||||| ||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  43277366 aactt-gttccccgtacgcacttcaagcaaaaacaccaaagtatagaccatctcttctttagtacctaaaatattagtgtaagggtcaatttccttatcc 43277464  T
Q  406 aaattggttcatacccaaagca-caagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaa 488  Q
    |||||||||||||| ||||||| ||  ||||||| || ||||||||||||| |||||||| ||||| ||||| || ||||||||    
T  43277465 aaattggttcatactcaaagcaccataaacaatgtcataaaatagatagtatcaaaacttatcaataaaaaaaaattaagaaaa 43277548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 111 - 599
Target Start/End: Original strand, 11937021 - 11937506
Alignment:
Q  111 taacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatt-tcatcaataatatatattttag 209  Q
    |||||| ||| ||||| |||||||||||||||||||||||||| |  ||||| |||||  ||||||||||  || || |||| ||||||| || | ||||    
T  11937021 taacgctccgaattttaatccaagacattacgcctaaatcattcttattttc-gaaaattactactattttctttttatcattaataata-at-tcttag 11937117  T
Q  210 caaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaa 308  Q
    ||||  ||||||||||||||||||||||||||||||||  |||  |||||| |||||||||||| | | |  |||| |||||||||||| |||| |||||    
T  11937118 caaaatctatacaaaattcttaacataatttaattaaacatctcaaactaaatatccttcaaaattatttcttaaa-ttacaattcaattaaaa-cccaa 11937215  T
Q  309 tttcgtcccccgtacgcacttcaagcaaaacttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaaa 408  Q
    |||  ||||| | |||| |||||||||||||  ||||||||| | ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11937216 ttttttcccc-gcacgcgcttcaagcaaaacaccaaagcataca-catgtcttctttggtacctaaaatattagtgtaagggtcaatttccttatccaaa 11937313  T
Q  409 ttggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataa-gaaaatacatttaagt------c 500  Q
    ||||||||||  ||||||| ||| ||||||| || ||||   |||||| |||||||||||||| |||||||||||| ||||||||||| ||||      |    
T  11937314 ttggttcatattcaaagcataagaaacaatgtcataaaa---atagtatcaaaacttctcaattaaaaagaaataaggaaaatacattcaagttatatgc 11937410  T
Q  501 tttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    |||||  ||| ||||||||| ||||||||||  | ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  11937411 tttaa-ataaggttcacaca-atttcttttg-ctttataatagtttaatcacttatcaacacacaaatgtataacagacccaatgcaatgcaattatgt 11937506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 17537618 - 17537751
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaa-----acactactatttatttatttcatcaataatatata 203  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||     |||||||||||||||||||||||||||||||||||    
T  17537618 tgtaacgccccggattttgttccaagacattacgcctaaatcattttttttttctgaaaaaaaaaacactactatttatttatttcatcaataatatata 17537717  T
Q  204 ttttagcaaagcctatacaaaattcttaacataa 237  Q
    || ||||||| |||||||||||||||||||||||    
T  17537718 ttctagcaaaacctatacaaaattcttaacataa 17537751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 358 - 488
Target Start/End: Complemental strand, 8731575 - 8731443
Alignment:
Q  358 tcttctttgatacctaaaatattagtgtaaggg-tcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagta 455  Q
    ||||||||  |||||||||| ||  |||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  8731575 tcttctttagtacctaaaatgttgatgtaaggggtcaatttccttatccaaattggttcatactcaaagcacaagaaacaatgccataaaatagatagta 8731476  T
Q  456 acaaaacttctcaatcaaaaagaaataagaaaa 488  Q
     ||| |||| |||||||||||||||| ||||||    
T  8731475 tcaagacttatcaatcaaaaagaaattagaaaa 8731443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 358 - 488
Target Start/End: Complemental strand, 9083462 - 9083330
Alignment:
Q  358 tcttctttgatacctaaaatattagtgtaaggg-tcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagta 455  Q
    ||||||||  |||||||||| ||  |||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  9083462 tcttctttagtacctaaaatgttgatgtaaggggtcaatttccttatccaaattggttcatactcaaagcacaagaaacaatgccataaaatagatagta 9083363  T
Q  456 acaaaacttctcaatcaaaaagaaataagaaaa 488  Q
     ||| |||| |||||||||||||||| ||||||    
T  9083362 tcaagacttatcaatcaaaaagaaattagaaaa 9083330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 108 - 348
Target Start/End: Original strand, 3504511 - 3504747
Alignment:
Q  108 atgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttt 207  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||| ||  ||||   ||||||||| |||||| ||| | |||||| ||||| || | ||    
T  3504511 atgtaacgctccggattttgatccaagacatttcgcctaattcatatttatttttcaaaaaacactcctattt-tttttatcatcactaataaat-tatt 3504608  T
Q  208 agcaaagcctatacaaaattcttaacataatttaattaaaattcttgaact-aatatccttcaaaaatttctactaaagttacaattcaatcaaaaaccc 306  Q
    |||||| ||||||||  ||||||||||||| ||||||||| ||||| |||| |||||||||| ||  ||||| ||||| | |||||| |||| ||||| |    
T  3504609 agcaaaacctatacatgattcttaacataacttaattaaatttcttaaactaaatatccttc-aacctttcttctaaa-tcacaatttaatcgaaaactc 3504706  T
Q  307 aatttcgtcccccgtacgcacttcaagcaaaacttcaaagca 348  Q
    |||||||| |||||||||| |||||||||||||  |||||||    
T  3504707 aatttcgt-ccccgtacgcgcttcaagcaaaacaccaaagca 3504747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 376 - 483
Target Start/End: Complemental strand, 5704729 - 5704621
Alignment:
Q  376 atattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaa 474  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||   |||||||||||||  ||| |||||| ||||||    
T  5704729 atattaatgtaagggtcaatttccttatccaaattggttcatactcaaagcacaagaaacaatgctctaaaatagatagtataaaatcttctcgatcaaa 5704630  T
Q  475 aagaaataa 483  Q
    |||||||||    
T  5704629 aagaaataa 5704621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 129 - 311
Target Start/End: Complemental strand, 37980014 - 37979833
Alignment:
Q  129 tccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatattttagcaaagcctatacaaaattc 228  Q
    ||||||||||||||||| | ||||| || ||||   ||||||  || ||||| ||| | |||||||||||| || | |||||||| | |||||||||||     
T  37980014 tccaagacattacgcctcattcattatcatttttctaaaaacgatattatttttttttatcatcaataataaat-tcttagcaaa-cgtatacaaaattt 37979917  T
Q  229 ttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaattt 311  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||| | | |||||||| ||||| |||||||||||||||||    
T  37979916 ttaacataatttaattaaaattcttaaattaaatatccttcaaaaatctattctaaagttgcaattaaatcaaaaacccaattt 37979833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 376 - 483
Target Start/End: Complemental strand, 1461571 - 1461464
Alignment:
Q  376 atattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaa 474  Q
    |||||| |||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||  |||||||||| ||| ||||| |||| || |||    
T  1461571 atattaatgtaagagtcaatttccttatccaaattagttcatactcaaagcacaagaaacaatgccctaaaatagataataa-aaaacctctcgattaaa 1461473  T
Q  475 aagaaataa 483  Q
    |||||||||    
T  1461472 aagaaataa 1461464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 392 - 500
Target Start/End: Original strand, 17542113 - 17542223
Alignment:
Q  392 caatttccttatccaaattggttcatacccaaagca-caagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaat 489  Q
    ||||||||||||||||||| |||||||| ||||||| ||  ||||||| || |||||||||| || ||||||||  ||||||||||||| |||| |||||    
T  17542113 caatttccttatccaaattagttcatactcaaagcaccataaacaatgtcataaaatagataatatcaaaacttaccaatcaaaaagaattaagaaaaat 17542212  T
Q  490 acatttaagtc 500  Q
    ||||| |||||    
T  17542213 acattcaagtc 17542223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 483
Target Start/End: Complemental strand, 16972718 - 16972610
Alignment:
Q  376 atattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaa 474  Q
    |||||| |||||| |||||||| ||||| | ||||  ||||||| ||||||||||| ||||||||   |||||||||||||  ||| ||| || ||||||    
T  16972718 atattaatgtaagagtcaatttacttattctaattacttcatactcaaagcacaagaaacaatgctctaaaatagatagtataaaatcttttccatcaaa 16972619  T
Q  475 aagaaataa 483  Q
    |||||||||    
T  16972618 aagaaataa 16972610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 31283724 - 31283653
Alignment:
Q  122 attttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatca 193  Q
    |||||||||||||||||||||||||| |||||||  ||||  ||||||||||| ||||| ||| ||| ||||    
T  31283724 attttgatccaagacattacgcctaattcatttttatttttcgaaaaacactagtattttttttttttatca 31283653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 141
Target Start/End: Complemental strand, 5704997 - 5704965
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattac 141  Q
    ||||||| |||||||||||||||||||||||||    
T  5704997 tgtaacgtcccggattttgatccaagacattac 5704965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 109 - 599
Target Start/End: Complemental strand, 511 - 19
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||| ||| |||||  | ||    
T  511 tgtaacgccccggattttggtccaagacattacgtctaactcattttctttttctgaaaaacactactatttatttatttcatctatattatat--tcta 414  T
Q  209 gcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaa 308  Q
    ||||| |||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||| | ||||||||||||||| |||||||||||||||||||    
T  413 gcaaaacctatacaaaattcttaagataatgtaattaaaactcttaaactaatatccttcaagagtttctactaaagttaaaattcaatcaaaaacccaa 314  T
Q  309 tttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaa 407  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  313 tttcgtcccccgtacgcacttcaagcaaaaacttcaaagcataaatcatctcttctttgttacctaaaatgttagtgtaagggtcaatttccttatccaa 214  T
Q  408 attggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctttaag 506  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  213 attgattcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaag 114  T
Q  507 gtaaagttcacacacatttcttttg--tgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    |||||||||| ||||||||| ||||  | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  113 gtaaagttcatacacatttcctttgtatatatataacagtttaatcatttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 19  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 310; Significance: 1e-174; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 105 - 502
Target Start/End: Original strand, 1460 - 1858
Alignment:
Q  105 ataatgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatat-ata 203  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | |||| |||    
T  1460 ataatgtaacgccccggattttggtccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatt--ttatattata 1557  T
Q  204 ttttagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaa 303  Q
    || ||||||| |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1558 ttctagcaaaacctatacaaaattcttaacataatgtaattaaaactcttaaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaa 1657  T
Q  304 cccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttcctta 402  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  1658 cccaatttcgtcccccgtatgcacttccagcaaaaacttcaaagtatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttcctta 1757  T
Q  403 tccaaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtct 501  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  1758 tccaaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtct 1857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 80 - 258
Target Start/End: Original strand, 8547 - 8723
Alignment:
Q  80 gtccgaggattattgctctgataccataatgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatt 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8547 gtccgaggattattgctctgataccataatgtaacgccccggattttggtccaagacattacgcctaaatcattttccttttctgaaaaacactactatt 8646  T
Q  180 tatttatttcatcaataatatatattttagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaact 258  Q
    ||||||||||||| |||   |||||| ||||||| |||||||||||||||||||||||| ||||||||| |||| ||||    
T  8647 tatttatttcatctata--ttatattctagcaaaacctatacaaaattcttaacataatgtaattaaaactcttaaact 8723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 169; Significance: 2e-90; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 218 - 599
Target Start/End: Original strand, 32581 - 32949
Alignment:
Q  218 atacaaaattcttaa-cataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtc 315  Q
    ||||||||||||||| |||||||||| |||||||||| |||||| |||||||||||| || |  ||||| |||||||||||| ||||| ||||||| |||    
T  32581 atacaaaattcttaaacataatttaactaaaattcttaaactaaatatccttcaaaa-ttacatctaaaattacaattcaattaaaaatccaattt-gtc 32678  T
Q  316 ccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatccaaattggtt 414  Q
    |||  ||||||||||||  |||| |||||||||||||| ||||||  ||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  32679 ccctatacgcacttcaacaaaaaacttcaaagcatagaccatctc--ctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggtt 32776  T
Q  415 catacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaa--atacatttaagtctttaaggtaaag 512  Q
    ||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||| |||  |||||||||||| ||||||||||||    
T  32777 catactcaaagcacaagaacaaagccacaaaatagatagtatcaaaacttctcaatcaaaaagagataaaaaaagatacatttaagt-tttaaggtaaag 32875  T
Q  513 ttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgatgt 599  Q
    |||| |||||| |||||| | ||||||| ||||||             ||||||||||||||||||| |||||||||||||||||||    
T  32876 ttcatacacatatcttttttatatataatagttta-------------acacagatgtataacagactcaatgcaatgcaatgatgt 32949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 1e-89; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 109 - 500
Target Start/End: Complemental strand, 44437181 - 44436790
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    |||||||||||||||||||||  |||||||||  ||| | |||||||| ||||   |||||  |||| |||| ||| | |||||||||||| || | |||    
T  44437181 tgtaacgccccggattttgattgaagacattatacctgattcattttcatttttctaaaaatgctaccatttttttttatcatcaataataaat-tatta 44437083  T
Q  209 gcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaaccca 307  Q
    | ||| | |||||||||||||||||||||||||||||| |||||  |||||| |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  44437082 gaaaaacttatacaaaattcttaacataatttaattaagattctcaaactaaatatccttcaaaa-tttcttctaaagttacaattcaatcaaaaaccca 44436984  T
Q  308 atttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatcca 406  Q
    |||| ||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||||||||||| |||||||||||||    
T  44436983 attt-gtcccccatacgcacttcaagcaaaaacttcaaagcatagaccatctcttctttggtacctaaaatgttagtgtaagggtcgatttccttatcca 44436885  T
Q  407 aattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaat-aagaaaatacatttaagtc 500  Q
    ||||| ||||||| |||||||| || ||||||| ||  ||||||||| || |||||||| |||||||||||||| | || |||||||||| |||||    
T  44436884 aattgattcatactcaaagcaccagaaacaatgtca-taaatagataatatcaaaacttatcaatcaaaaagaattaaaaaaaatacattcaagtc 44436790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 109 - 591
Target Start/End: Original strand, 40840649 - 40841135
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    ||||||||||||||||||| ||||| ||||||| ||||| |||||||| ||||   |||||   |||| ||| |   | |||||||||||| ||  || |    
T  40840649 tgtaacgccccggattttggtccaaaacattacacctaattcattttcatttttcaaaaaaatgtactttttttgcttatcatcaataataaattcttaa 40840748  T
Q  209 gcaaagcctatacaaaa-ttcttaacataatttaattaaaattcttgaact-aatatccttcaaaaatttctactaaagttacaattcaatcaaaaaccc 306  Q
      ||| ||||||||||| |||||||| |||  |||||||||||||| || | |||||||||||||| || ||  | || |||||||||||||||||| ||    
T  40840749 caaaaacctatacaaaaattcttaacctaacataattaaaattcttaaaatgaatatccttcaaaa-ttacttttcaaattacaattcaatcaaaaatcc 40840847  T
Q  307 aatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatcc 405  Q
    |||||   |||||||||||||||||||||||| ||| |||||||||| ||||||||||||| ||| |||||| |||||||||||||||||||||||||||    
T  40840848 aatttgtccccccgtacgcacttcaagcaaaaactttaaagcatagaccatctcttctttggtacataaaatgttagtgtaagggtcaatttccttatcc 40840947  T
Q  406 aaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaa-tacattta------a 497  Q
    ||||| |||||||| ||||||||||| |||||||     | |||||||||| ||||||||||||| ||||||||| |||||||| |||||| |      |    
T  40840948 aaattagttcatactcaaagcacaagaaacaatg-----agatagatagtaccaaaacttctcaaacaaaaagaattaagaaaattacattcaattcata 40841042  T
Q  498 gtctttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcacttatcaacacacagatgtataacagacccaatgcaatgc 591  Q
     |||||||| ||||||||||||||||||| ||||| | ||||| |||||||||||||||||||||||| ||| ||| |||||||||||||||||    
T  40841043 ttctttaagttaaagttcacacacatttcctttgtat-tataatagtttaatcacttatcaacacacaaatgcatagcagacccaatgcaatgc 40841135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 109 - 500
Target Start/End: Original strand, 41957597 - 41957975
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatt-tcatcaataatatatatttt 207  Q
    |||||||||  |||||||||| ||||||||||| ||||| |||||||| ||||| |||||  ||||||||||  || |  |||||||||||| || | ||    
T  41957597 tgtaacgccttggattttgattcaagacattactcctaattcattttcattttc-gaaaattactactattttcttttcatcatcaataataaat-tctt 41957694  T
Q  208 agcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaaccc 306  Q
    ||||||  |||||||||||||||||||||||||||| ||||||| | || ||| ||||||          |||  ||| ||||||||| |||||||| ||    
T  41957695 agcaaaatctatacaaaattcttaacataatttaataaaaattcctaaaataaatatcct----------cta--aaatttacaattcgatcaaaaatcc 41957782  T
Q  307 aatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaatttccttatcc 405  Q
    |||||  |||||| |||||||| ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41957783 aattta-tcccccatacgcactacaagcaaaaacttcaaagcatagaccatctcttctttggtacctaaaatattagtgtaagggtcaatttccttatcc 41957881  T
Q  406 aaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc 500  Q
    |||||||||||||| ||||||| |  ||||||| || ||||||||||||| ||||||||||||||||||||||  |||||||||||||| |||||    
T  41957882 aaattggttcatactcaaagca-agaaacaatgtcataaaatagatagtatcaaaacttctcaatcaaaaagatttaagaaaatacattcaagtc 41957975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 384 - 552
Target Start/End: Complemental strand, 35840955 - 35840786
Alignment:
Q  384 gtaagggtcaatttccttatccaaattggttcatacccaaagcacaagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataa 483  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||     
T  35840955 gtaagggtcaatttccttatccaaattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaattaaaaagaaatag 35840856  T
Q  484 g-aaaatacatttaagtctttaaggtaaagttcacacacatttcttttgtgtatataacagtttaatcac 552  Q
    | |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  35840855 gaaaaatacatttaagtctttaaggtaaagttcatacacatttcttttgtatatataacagtttaatcac 35840786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 273 - 433
Target Start/End: Original strand, 22815622 - 22815783
Alignment:
Q  273 atttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagc-aaaacttcaaagcatagatcatctcttctttgatacc 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||  |||||||| ||| ||||    
T  22815622 atttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaaacttcaaatcatagactatctcttcattggtacc 22815721  T
Q  372 taaaatattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaagaa 433  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||||| |||||||| ||||    
T  22815722 taaaatgttaatgtaagggtcaatttcattatccaaattggttcatactcaaagcaccagaa 22815783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 286 - 488
Target Start/End: Complemental strand, 6150424 - 6150220
Alignment:
Q  286 ttacaattca-atcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagt 383  Q
    |||||||||| |||||||||| ||||| |||| ||||||||||||||||||||| |||||||||||||| ||||||||||||| || ||||||| |||||    
T  6150424 ttacaattcagatcaaaaacctaattt-gtcctccgtacgcacttcaagcaaaaacttcaaagcatagaccatctcttctttggtatctaaaatgttagt 6150326  T
Q  384 gtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaata 482  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| || ||||||| || |||||||||| || ||||||||  ||||||||||||| ||    
T  6150325 gtaagggtcaatttccttatccaaattggttcatactcaaaacaccagaaacaatgtcataaaatagataatatcaaaacttaccaatcaaaaagaatta 6150226  T
Q  483 agaaaa 488  Q
    ||||||    
T  6150225 agaaaa 6150220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 109 - 280
Target Start/End: Original strand, 22640563 - 22640735
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctg---aaaaacactactatttatttatttcatcaataatatatatt 205  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||||| |||| ||   |||||||| ||||||||||||||| |||||||||| |  |     
T  22640563 tgtaacgccccgaattttgatacaagacattacgcctaaattattttctttttttgaaaaaaaacacgactatttatttatttaatcaataata-agttc 22640661  T
Q  206 ttagcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctac 280  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  22640662 ttagcaaagcctatacaaaattcttgacataatttaa-taaaactcttaaactaatatccttcaaaaatttctac 22640735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 383 - 483
Target Start/End: Original strand, 12659338 - 12659439
Alignment:
Q  383 tgtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaat 481  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||   |||||||||||||  ||| |||||| |||||||||||||    
T  12659338 tgtaagggtcaatttccttatccaaattggttcatactcaaagcacaagaaacaatgctctaaaatagatagtataaaatcttctcgatcaaaaagaaat 12659437  T
Q  482 aa 483  Q
    ||    
T  12659438 aa 12659439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 376 - 483
Target Start/End: Complemental strand, 10251053 - 10250945
Alignment:
Q  376 atattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaa 474  Q
    |||||| |||||| ||||||||||||||||||||||||||||||  |||||||||| ||||||||   ||||||||||| |  ||| |||||| || |||    
T  10251053 atattaatgtaagagtcaatttccttatccaaattggttcatactaaaagcacaagaaacaatgctctaaaatagatagcatgaaatcttctcgataaaa 10250954  T
Q  475 aagaaataa 483  Q
    |||||||||    
T  10250953 aagaaataa 10250945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 109 - 390
Target Start/End: Complemental strand, 26162631 - 26162358
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| || ||||  |||||  |||||||||  ||  ||| |||||||||| || | | |    
T  26162631 tgtaacgccctggattttgattcaagacattacgcctaaatcattctcttttttcgaaaattactactatt--ttctttttatcaataataaat-tctca 26162535  T
Q  209 gc-aaagcctatac-aaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaat-caaaaacc 305  Q
     | ||| ||||||| |||||||||| |||||||||||||||| | |||||  ||||||| || ||| | |||  || | |||||||| ||| ||||||||    
T  26162534 ccaaaaacctatacgaaaattcttagcataatttaattaaaact-ttgaataaatatcc-tccaaattatct-ttacaattacaatttaatccaaaaacc 26162438  T
Q  306 caatttcgtcccccgtacgcacttcaagcaaaacttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaaggg 390  Q
    || |||||| ||||| |||| ||||| |||||||  ||||||    ||||||||||||||   ||||||||| || |||||||||    
T  26162437 cattttcgt-ccccgcacgctcttcatgcaaaacaccaaagc----atcatctcttctttagaacctaaaatgttggtgtaaggg 26162358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 35841096 - 35841029
Alignment:
Q  245 aaaattcttgaactaat-atccttcaaaaatttctactaaagttacaattcaatcaaaaacccaattt 311  Q
    ||||||||| || |||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||    
T  35841096 aaaattcttaaattaattatccttcaaaattttcttctagagttacaattcaatcaaaaacccaattt 35841029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 6161814 - 6161743
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactattt 180  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||| |  ||||  ||||| |||||||||||    
T  6161814 tgtaacgccccgaattttggtccaagacattacgcctaaattattcttatttttagaaaatcactactattt 6161743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 29132249 - 29132305
Alignment:
Q  84 gaggattattgctctgataccataatgtaacgccccggattttgatccaagacatta 140  Q
    ||||||||||||||||| ||||| ||||||||| || ||||| |||||| |||||||    
T  29132249 gaggattattgctctgacaccattatgtaacgctccagatttagatccatgacatta 29132305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 232
Target Start/End: Complemental strand, 35841207 - 35841086
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    |||||| ||||| |||||| ||||||||||||||| |||  |||| || |||| | ||||| |||||||||| | | | |||||||||||| || | |||    
T  35841207 tgtaactccccgaattttggtccaagacattacgcttaatacattctcatttt-tcaaaaatactactatttttgtttatcatcaataataaat-tatta 35841110  T
Q  209 gcaaagcctatacaaaattcttaa 232  Q
    | ||| | ||||||||||||||||    
T  35841109 gaaaaacttatacaaaattcttaa 35841086  T

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Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 141
Target Start/End: Complemental strand, 4233140 - 4233108
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattac 141  Q
    |||||||||||||||||| ||||||||||||||    
T  4233140 tgtaacgccccggattttcatccaagacattac 4233108  T

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Target: scaffold1838 (Bit Score: 103; Significance: 6e-51; HSPs: 2)
Name: scaffold1838
Description:

Target: scaffold1838; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 299 - 531
Target Start/End: Complemental strand, 1077 - 840
Alignment:
Q  299 aaaaacccaatttcgtcccccgtacgcacttcaagcaaaa-cttcaaagcatagatcatctcttctttgatacctaaaatattagtgtaagggtcaattt 397  Q
    ||||||||||||| ||||||||||| ||||||||| |||| ||||||||||| || ||||||||||||| ||| ||||||||||||||||||||||||||    
T  1077 aaaaacccaattt-gtcccccgtacacacttcaagaaaaaacttcaaagcatggaccatctcttctttggtacttaaaatattagtgtaagggtcaattt 979  T
Q  398 ccttatccaaattggttcatacccaaagca-caagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaaagaaataag-aaaatacattt 495  Q
    |||||||||||||||||||||  ||||||| ||  ||||||| || ||| |||| | || |||||||| ||||||||||||||||||| ||||||||||     
T  978 ccttatccaaattggttcata-tcaaagcaccataaacaatgtcataaagtagaaaatatcaaaacttatcaatcaaaaagaaataagaaaaatacattc 880  T
Q  496 aagtc----tttaaggtaaagttcacacacatttcttttg 531  Q
    |||||    ||| | |||||||||||||||||||| ||||    
T  879 aagtcatatttttaagtaaagttcacacacatttcatttg 840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1838; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 1153 - 1118
Alignment:
Q  216 ctatacaaaattcttaacataatttaattaaaattc 251  Q
    ||||||||||||||||||||||||||||||||||||    
T  1153 ctatacaaaattcttaacataatttaattaaaattc 1118  T

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Target: scaffold0013 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 240797 - 241003
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttatttatttcatcaataatatatatttta 208  Q
    ||||| |||| |||||||||||||||| |||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||                
T  240797 tgtaatgccctggattttgatccaagatattacgtctaaatcattttctttctctgaaaaacactactatttatttatttcatcaata------------ 240884  T
Q  209 gcaaagcctatacaaaattcttaacataatttaattaaaattcttgaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaa 308  Q
             ||| |||||||||||||||||||||||||||||||| || ||||||||||| |||||| || ||||| |||||||||||| ||||||||||    
T  240885 ---------ataaaaaattcttaacataatttaattaaaattcttaaattaatatccttc-aaaattacttctaaaattacaattcaat-aaaaacccaa 240973  T
Q  309 tttcgtcccccgtacgcacttcaagcaaaac 339  Q
    |||||| |||| ||||| ||||||| |||||    
T  240974 tttcgt-ccccatacgcgcttcaagaaaaac 241003  T

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Target: scaffold0013; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 368 - 488
Target Start/End: Original strand, 242430 - 242552
Alignment:
Q  368 tacctaaaatattagtgtaa-gggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttc 465  Q
    |||||||||| || |||||| |||||||||||||| | ||||||||||||||| ||||||||||| |||||||  | ||| |||||  || |||||||||    
T  242430 tacctaaaatgttggtgtaaagggtcaatttccttgttcaaattggttcatactcaaagcacaagaaacaatgttataaattagatgatatcaaaacttc 242529  T
Q  466 tcaatcaaaaagaaataagaaaa 488  Q
    |||||||||||||| ||||||||    
T  242530 tcaatcaaaaagaattaagaaaa 242552  T

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Target: scaffold0120 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 376 - 483
Target Start/End: Original strand, 2115 - 2223
Alignment:
Q  376 atattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaa 474  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||   |||||||||||||  ||| |||||| ||||||    
T  2115 atattaatgtaagggtcaatttccttatccaaattggttcatactcaaagcacaagaaacaatgctctaaaatagatagtataaaatcttctcgatcaaa 2214  T
Q  475 aagaaataa 483  Q
    |||||||||    
T  2215 aagaaataa 2223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 1845 - 1877
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattac 141  Q
    |||||||||||||||||| ||||||||||||||    
T  1845 tgtaacgccccggattttcatccaagacattac 1877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 61; Significance: 7e-26; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 377 - 492
Target Start/End: Original strand, 356356 - 356472
Alignment:
Q  377 tattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaag-aacaatgccacaaaatagatagtaacaaaacttctcaatcaaaa 475  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||   |||||||||||||  ||| |||||| |||||||    
T  356356 tattaatgtaagggtcaatttccttattcaaattggttcatactcaaagcacaagaaacaatgctctaaaatagatagtataaaatcttctcgatcaaaa 356455  T
Q  476 agaaataagaaaataca 492  Q
    |||||||| || |||||    
T  356456 agaaataaaaatataca 356472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 356044 - 356107
Alignment:
Q  78 ttgtccgaggattattgctctgataccataatgtaacgccccggattttgatccaagacattac 141  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  356044 ttgtccgaggatcattgctctgataccataatgtaacgccccggattttcatccaagacattac 356107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 377 - 483
Target Start/End: Complemental strand, 11510 - 11403
Alignment:
Q  377 tattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcac-aagaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaa 475  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| |||||||| || ||||||||   |||||||||||||  |||  |||||||||||||    
T  11510 tattaatgtaaggatcaatttccttatccaaattggttcatactcaaagcacaaaaaacaatgctctaaaatagatagtataaaattttctcaatcaaaa 11411  T
Q  476 agaaataa 483  Q
    ||||||||    
T  11410 agaaataa 11403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 147493 - 147556
Alignment:
Q  77 tttgtccgaggattattgctctgataccataatgtaacgccccggattttgatccaagacatta 140  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||||||| |||||||||||||    
T  147493 tttgtccgaggattattgctctaatactataatgtaacgtcccggatttttatccaagacatta 147556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 34855 - 34918
Alignment:
Q  77 tttgtccgaggattattgctctgataccataatgtaacgccccggattttgatccaagacatta 140  Q
    |||||||||||||||||||||| |||| || ||||||||| ||||||||| |||||||||||||    
T  34855 tttgtccgaggattattgctctaatactattatgtaacgctccggatttttatccaagacatta 34918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 377 - 483
Target Start/End: Complemental strand, 89970 - 89863
Alignment:
Q  377 tattagtgtaagggtcaatttccttatccaaattggttcatacccaaagcacaa-gaacaatgccacaaaatagatagtaacaaaacttctcaatcaaaa 475  Q
    ||||| ||||||||||||||| | |||||||||||| ||||||  |||||||||  ||||||||   |||||||||||||  ||| ||||||  ||||||    
T  89970 tattaatgtaagggtcaattttcctatccaaattgggtcatacttaaagcacaataaacaatgctctaaaatagatagtataaaatcttctcggtcaaaa 89871  T
Q  476 agaaataa 483  Q
    ||||||||    
T  89870 agaaataa 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 32356 - 32252
Alignment:
Q  122 attttgatccaagacattacgcctaaatcattttccttttctgaaaaacactactatttat-ttatttcatcaataatatatattttagcaaagcctata 220  Q
    ||||||||| |||| ||||||||||||| |||||| |||| | |||||||||||||||| | || | |||||||||||| || | ||| |||| ||||||    
T  32356 attttgatcgaagatattacgcctaaattattttcatttt-tcaaaaacactactatttttgttttatcatcaataataaat-tcttaacaaaacctata 32259  T
Q  221 caaaatt 227  Q
    |||||||    
T  32258 caaaatt 32252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 141
Target Start/End: Complemental strand, 5355 - 5323
Alignment:
Q  109 tgtaacgccccggattttgatccaagacattac 141  Q
    |||||||||||||||||| ||||||||||||||    
T  5355 tgtaacgccccggattttaatccaagacattac 5323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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