View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7850_low_36 (Length: 379)

Name: NF7850_low_36
Description: NF7850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7850_low_36
NF7850_low_36
[»] chr3 (46 HSPs)
chr3 (102-371)||(13934902-13935171)
chr3 (1-58)||(38944154-38944211)
chr3 (1-58)||(46344415-46344472)
chr3 (1-58)||(30400169-30400226)
chr3 (1-58)||(32931931-32931988)
chr3 (1-58)||(36818957-36819014)
chr3 (1-58)||(50879596-50879653)
chr3 (1-58)||(11327109-11327166)
chr3 (1-58)||(13159662-13159719)
chr3 (1-58)||(20714244-20714301)
chr3 (1-58)||(50559224-50559282)
chr3 (1-58)||(3069588-3069644)
chr3 (1-58)||(7867724-7867781)
chr3 (1-58)||(8254028-8254085)
chr3 (1-58)||(9557935-9557992)
chr3 (1-58)||(16295465-16295522)
chr3 (1-58)||(42643236-42643293)
chr3 (1-58)||(44855252-44855309)
chr3 (1-58)||(45150279-45150336)
chr3 (1-58)||(48944723-48944780)
chr3 (1-58)||(52454107-52454164)
chr3 (1-57)||(38471644-38471700)
chr3 (1-58)||(6178438-6178495)
chr3 (1-58)||(48405411-48405469)
chr3 (1-58)||(108432-108489)
chr3 (1-58)||(462414-462471)
chr3 (1-58)||(1207947-1208004)
chr3 (1-58)||(1295333-1295390)
chr3 (1-58)||(1901939-1901996)
chr3 (1-58)||(1911385-1911442)
chr3 (1-58)||(2482687-2482744)
chr3 (1-58)||(3958031-3958088)
chr3 (1-58)||(14957837-14957894)
chr3 (1-58)||(18169158-18169215)
chr3 (1-58)||(20215949-20216006)
chr3 (1-58)||(21579115-21579172)
chr3 (1-58)||(34021476-34021533)
chr3 (1-58)||(35376564-35376621)
chr3 (1-58)||(36925746-36925801)
chr3 (1-54)||(41309005-41309058)
chr3 (1-58)||(46473129-46473186)
chr3 (1-58)||(49196697-49196754)
chr3 (1-58)||(53102915-53102972)
chr3 (1-58)||(53932404-53932461)
chr3 (19-59)||(14771606-14771646)
chr3 (2-58)||(53473611-53473667)
[»] chr4 (45 HSPs)
chr4 (1-58)||(7037497-7037554)
chr4 (2-58)||(1796367-1796423)
chr4 (1-58)||(5208340-5208397)
chr4 (1-58)||(8026766-8026823)
chr4 (1-58)||(3222990-3223047)
chr4 (1-58)||(9032781-9032838)
chr4 (1-58)||(24235321-24235378)
chr4 (1-58)||(27001422-27001479)
chr4 (1-58)||(47105912-47105969)
chr4 (1-58)||(51377306-51377363)
chr4 (1-58)||(53662441-53662498)
chr4 (1-58)||(55268014-55268071)
chr4 (1-56)||(925075-925130)
chr4 (1-56)||(52487282-52487337)
chr4 (1-58)||(3475870-3475927)
chr4 (1-58)||(4100768-4100825)
chr4 (1-58)||(24209800-24209857)
chr4 (1-58)||(31221414-31221471)
chr4 (1-58)||(34116553-34116610)
chr4 (1-58)||(35017154-35017211)
chr4 (1-58)||(39449174-39449230)
chr4 (5-58)||(44368219-44368272)
chr4 (5-58)||(46480521-46480574)
chr4 (1-58)||(52669622-52669679)
chr4 (2-58)||(47014940-47014996)
chr4 (1-52)||(25936247-25936298)
chr4 (1-58)||(42815405-42815463)
chr4 (1-58)||(12638826-12638883)
chr4 (5-58)||(18568832-18568885)
chr4 (1-58)||(23347776-23347833)
chr4 (1-58)||(31318754-31318811)
chr4 (1-58)||(33438046-33438103)
chr4 (1-58)||(34259816-34259873)
chr4 (1-58)||(35037610-35037667)
chr4 (1-58)||(36812416-36812473)
chr4 (1-58)||(43358614-43358671)
chr4 (1-58)||(44272823-44272880)
chr4 (1-58)||(44571437-44571494)
chr4 (1-58)||(51039129-51039186)
chr4 (5-58)||(53384344-53384397)
chr4 (1-58)||(53781850-53781906)
chr4 (1-58)||(54803341-54803398)
chr4 (6-58)||(169520-169572)
chr4 (4-59)||(38888872-38888928)
chr4 (4-59)||(41262360-41262416)
[»] chr2 (29 HSPs)
chr2 (1-58)||(20974354-20974411)
chr2 (1-58)||(34144564-34144621)
chr2 (1-58)||(3196100-3196157)
chr2 (1-58)||(6746218-6746275)
chr2 (1-58)||(6884911-6884968)
chr2 (1-58)||(27307244-27307301)
chr2 (5-58)||(29893611-29893664)
chr2 (1-58)||(3091742-3091799)
chr2 (1-58)||(10687942-10687999)
chr2 (1-58)||(13553148-13553205)
chr2 (1-58)||(35171239-35171296)
chr2 (1-58)||(36383463-36383520)
chr2 (1-58)||(38246764-38246821)
chr2 (1-58)||(44484669-44484726)
chr2 (2-58)||(14140351-14140407)
chr2 (3-58)||(1876302-1876357)
chr2 (1-44)||(30487457-30487500)
chr2 (15-58)||(30487496-30487539)
chr2 (9-56)||(44085277-44085324)
chr2 (1-55)||(43621961-43622015)
chr2 (1-58)||(6365187-6365244)
chr2 (1-58)||(15283263-15283320)
chr2 (1-58)||(28165130-28165187)
chr2 (1-58)||(29168726-29168783)
chr2 (1-58)||(30856808-30856865)
chr2 (1-58)||(36909856-36909913)
chr2 (1-58)||(39737699-39737756)
chr2 (1-58)||(5167753-5167812)
chr2 (1-58)||(7428434-7428487)
[»] chr1 (35 HSPs)
chr1 (1-58)||(7371961-7372018)
chr1 (1-58)||(25995461-25995518)
chr1 (2-58)||(6829797-6829853)
chr1 (1-58)||(13813559-13813616)
chr1 (1-58)||(18610774-18610831)
chr1 (1-56)||(25130706-25130761)
chr1 (1-59)||(18959004-18959062)
chr1 (1-58)||(3291438-3291495)
chr1 (1-58)||(7078513-7078570)
chr1 (1-58)||(26585186-26585243)
chr1 (5-58)||(27578183-27578236)
chr1 (1-58)||(27787490-27787547)
chr1 (1-58)||(30530587-30530644)
chr1 (1-58)||(32821636-32821693)
chr1 (1-58)||(35972817-35972874)
chr1 (1-58)||(42256461-42256518)
chr1 (1-56)||(50145814-50145869)
chr1 (1-58)||(740968-741026)
chr1 (1-58)||(9011646-9011703)
chr1 (1-58)||(11097897-11097954)
chr1 (1-58)||(12999835-12999892)
chr1 (1-58)||(15061846-15061903)
chr1 (1-58)||(19651411-19651468)
chr1 (1-58)||(21854477-21854534)
chr1 (1-58)||(22674713-22674770)
chr1 (1-58)||(26547235-26547292)
chr1 (1-58)||(27352631-27352688)
chr1 (1-58)||(29489372-29489429)
chr1 (5-58)||(32938860-32938913)
chr1 (1-58)||(36669383-36669440)
chr1 (1-58)||(46902614-46902671)
chr1 (1-58)||(48872964-48873020)
chr1 (1-58)||(50226892-50226949)
chr1 (1-58)||(50528070-50528127)
chr1 (1-61)||(9882672-9882732)
[»] chr7 (31 HSPs)
chr7 (1-59)||(37325832-37325890)
chr7 (1-58)||(30864430-30864487)
chr7 (1-58)||(116632-116689)
chr7 (1-58)||(33050184-33050241)
chr7 (9-58)||(42431724-42431773)
chr7 (2-58)||(47530305-47530361)
chr7 (1-56)||(37385246-37385301)
chr7 (1-55)||(43255580-43255634)
chr7 (1-58)||(2347072-2347129)
chr7 (1-58)||(4971291-4971348)
chr7 (1-58)||(26153647-26153703)
chr7 (1-58)||(27164850-27164907)
chr7 (1-58)||(28548234-28548291)
chr7 (1-58)||(29162292-29162349)
chr7 (1-58)||(37969932-37969989)
chr7 (1-56)||(34304691-34304746)
chr7 (1-58)||(30061282-30061340)
chr7 (21-59)||(46725617-46725655)
chr7 (1-58)||(3040413-3040470)
chr7 (1-58)||(10656633-10656690)
chr7 (1-58)||(19426581-19426638)
chr7 (5-58)||(19880248-19880301)
chr7 (1-58)||(22692085-22692142)
chr7 (4-57)||(28596908-28596961)
chr7 (1-58)||(29763831-29763888)
chr7 (1-58)||(30538627-30538684)
chr7 (1-58)||(32933549-32933605)
chr7 (1-58)||(35212968-35213025)
chr7 (1-58)||(40693541-40693598)
chr7 (1-58)||(43079645-43079702)
chr7 (1-58)||(44511140-44511197)
[»] chr8 (36 HSPs)
chr8 (1-58)||(30927944-30928001)
chr8 (1-58)||(41293734-41293791)
chr8 (1-58)||(1065418-1065475)
chr8 (1-58)||(20288534-20288591)
chr8 (1-58)||(21075163-21075220)
chr8 (1-58)||(41273516-41273573)
chr8 (1-56)||(14228710-14228765)
chr8 (1-58)||(6004945-6005002)
chr8 (1-54)||(32185674-32185727)
chr8 (1-58)||(36064031-36064088)
chr8 (1-58)||(36497662-36497719)
chr8 (1-58)||(40380282-40380339)
chr8 (1-58)||(44711979-44712036)
chr8 (1-57)||(21648944-21649000)
chr8 (1-57)||(43186298-43186354)
chr8 (19-58)||(2621786-2621825)
chr8 (5-56)||(6656362-6656413)
chr8 (5-56)||(6736764-6736815)
chr8 (1-56)||(6746062-6746117)
chr8 (15-58)||(41746821-41746864)
chr8 (1-58)||(7376507-7376564)
chr8 (3-56)||(12697728-12697781)
chr8 (1-58)||(14531622-14531679)
chr8 (1-58)||(20995071-20995128)
chr8 (1-58)||(28156204-28156261)
chr8 (1-58)||(28927682-28927739)
chr8 (1-58)||(33635583-33635640)
chr8 (1-58)||(37562154-37562211)
chr8 (1-58)||(37784387-37784444)
chr8 (1-58)||(42012603-42012660)
chr8 (1-58)||(42047336-42047393)
chr8 (1-58)||(45101397-45101454)
chr8 (26-58)||(31731461-31731493)
chr8 (2-58)||(35937526-35937582)
chr8 (1-57)||(40614203-40614259)
chr8 (26-58)||(43419880-43419912)
[»] chr5 (29 HSPs)
chr5 (1-58)||(3263521-3263578)
chr5 (1-58)||(9594479-9594536)
chr5 (1-58)||(9599741-9599798)
chr5 (1-58)||(30574390-30574447)
chr5 (1-58)||(4954467-4954524)
chr5 (1-58)||(38010873-38010930)
chr5 (1-56)||(11464135-11464190)
chr5 (1-58)||(9939444-9939502)
chr5 (4-58)||(27271067-27271121)
chr5 (1-58)||(582880-582937)
chr5 (1-58)||(15918003-15918060)
chr5 (1-58)||(27440480-27440537)
chr5 (1-58)||(32634709-32634766)
chr5 (1-55)||(3154656-3154710)
chr5 (1-51)||(9596827-9596877)
chr5 (8-58)||(12512804-12512854)
chr5 (1-58)||(1107982-1108039)
chr5 (1-58)||(5996668-5996725)
chr5 (1-58)||(8959161-8959218)
chr5 (1-58)||(12401193-12401250)
chr5 (1-58)||(12718393-12718450)
chr5 (1-58)||(12779619-12779676)
chr5 (1-58)||(15622045-15622102)
chr5 (1-58)||(24329995-24330052)
chr5 (1-58)||(29803226-29803283)
chr5 (1-58)||(32379942-32379999)
chr5 (1-58)||(34381013-34381070)
chr5 (1-58)||(39595273-39595330)
chr5 (1-58)||(39788719-39788776)
[»] scaffold0514 (1 HSPs)
scaffold0514 (2-58)||(1510-1566)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-58)||(18596-18653)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-58)||(147269-147326)
scaffold0002 (1-58)||(440719-440776)
[»] chr6 (15 HSPs)
chr6 (1-58)||(2056784-2056841)
chr6 (1-58)||(3339512-3339569)
chr6 (1-58)||(3660366-3660423)
chr6 (1-58)||(9954549-9954606)
chr6 (1-58)||(12044333-12044390)
chr6 (1-58)||(25995443-25995500)
chr6 (1-58)||(11017384-11017441)
chr6 (5-58)||(17902709-17902762)
chr6 (1-58)||(25554246-25554303)
chr6 (1-58)||(26094906-26094963)
chr6 (1-58)||(27334859-27334916)
chr6 (1-58)||(27395599-27395656)
chr6 (1-58)||(30796088-30796145)
chr6 (1-58)||(32457265-32457322)
chr6 (1-58)||(32729890-32729947)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-58)||(88809-88862)
[»] scaffold0662 (1 HSPs)
scaffold0662 (2-58)||(1079-1135)
[»] scaffold0131 (1 HSPs)
scaffold0131 (3-58)||(15549-15604)
[»] scaffold0618 (1 HSPs)
scaffold0618 (1-58)||(3361-3418)
[»] scaffold0651 (1 HSPs)
scaffold0651 (1-58)||(4859-4916)
[»] scaffold0592 (1 HSPs)
scaffold0592 (1-58)||(911-968)
[»] scaffold0508 (1 HSPs)
scaffold0508 (1-58)||(11549-11606)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-58)||(72367-72424)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-58)||(249155-249212)
[»] scaffold0174 (1 HSPs)
scaffold0174 (1-56)||(34806-34862)
[»] scaffold0140 (1 HSPs)
scaffold0140 (164-233)||(31059-31129)


Alignment Details
Target: chr3 (Bit Score: 258; Significance: 1e-143; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 102 - 371
Target Start/End: Complemental strand, 13935171 - 13934902
Alignment:
Q  102 ttaaatctatttgtataatgttaactacgtgcacgcttctgaatgacaaccacatgtgctactgtccttttgtcactttctcatatgagcacatgttatt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13935171 ttaaatctatttgtataatgttaactacgtgcacgcttctgaatgacaaccacatgtgctactgtccttttgtcactttctcatatgagcacatgttatt 13935072  T
Q  202 gccccattgtgtgctggtccctttctagttctacacttttggatatggggcaaattgttggaggttcctaatgccttgtgcatatattactcatgaaatt 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13935071 gccccattgtgtgctggtccctttctagttctacacttttggatatggtgcaaattgttggaggttcctaatgccttgtgcatatattactcataaaatt 13934972  T
Q  302 attcaaagaatccacacctttcaacatcaaacttgtctctgacattattattcttctaatcccaccacca 371  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13934971 attcaaagaatccagacctttcaacatcaaacttgtctctgacattattattcttctaatcccaccacca 13934902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38944154 - 38944211
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  38944154 tatgagagagaaaattgtacaaaagttgtcacaaattagttgtacaaatatcatttct 38944211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46344472 - 46344415
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||    
T  46344472 tatgagagagaaaattgtacaaaaattgtaacaaattagttgtacaaatatcatttct 46344415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30400169 - 30400226
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||    
T  30400169 tatgagagagaaagttgtacaaaagttgtcacaaatttgttgtacaaatatcatttct 30400226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32931931 - 32931988
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||    
T  32931931 tatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttct 32931988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36819014 - 36818957
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||    
T  36819014 tatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttct 36818957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50879653 - 50879596
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||    
T  50879653 tatgagagagaaagttgtacaaaagttgtcacaatttagttgtacaaatatcatttct 50879596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11327166 - 11327109
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||||| | |||||| |||||||||||||    
T  11327166 tatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttct 11327109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13159719 - 13159662
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||| | |||||||||||    
T  13159719 tatgagagagaaagttgtacaaaagttgtcacaaattaattgtacagatatcatttct 13159662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20714301 - 20714244
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||||| || |||||||||||| |||||| |||||||||||||    
T  20714301 tatgagagagaaagttgtacagaagttgtcacaaattggttgtacaaatatcatttct 20714244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 50559224 - 50559282
Alignment:
Q  1 tatgagagagaaaattgt-acaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||| |||||| |||||| ||| |||||||| |||||||||||||    
T  50559224 tatgagagagaaaattgtcacaaaagttgtcaaaaaatagttgtacaaatatcatttct 50559282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3069588 - 3069644
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||  |||||||||||| |||||| |||||||||||||    
T  3069588 tatgagagagaaagttgtacaaag-ttgtcacaaattggttgtacaaatatcatttct 3069644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7867724 - 7867781
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||| ||||||||||  |||| |||||||||| |||||||| |||||||||||||    
T  7867724 tatgagaaagaaaattgtttaaaagttgtcacaaaatagttgtacaaatatcatttct 7867781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8254085 - 8254028
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||| ||| |||||||||| | |||||| |||||||||||||    
T  8254085 tatgagagagaaagttgtaccaaagttgtcacaaaatggttgtacaaatatcatttct 8254028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9557935 - 9557992
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||  |||| | ||||||||||||||||||||    
T  9557935 tatgagagagaaagttgtacaaaaattgtatcaaaattgttgtataaatatcatttct 9557992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16295522 - 16295465
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||  |||||| |||||| |||||||||||||    
T  16295522 tatgagagagaaagttgtacaaaagttgtatcaaattggttgtacaaatatcatttct 16295465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42643293 - 42643236
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||  |||||| |||||| |||||||||||||    
T  42643293 tatgagagagaaagttgtacaaaagttgttccaaattggttgtacaaatatcatttct 42643236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44855309 - 44855252
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| || ||||||| |||||||||| ||||| || |||||||||||||    
T  44855309 tatgagagagaaagttatacaaaagttgtcacaaaatagttatacaaatatcatttct 44855252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 45150279 - 45150336
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| ||||||||||| ||||||||||    
T  45150279 tatgagagagaaagttgtctaaaagttgtcacaaaatagttgtataagtatcatttct 45150336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 48944723 - 48944780
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||||||||| |||| | ||| | |||||| |||||||||||||    
T  48944723 tatgagagagaaaattgtacaaaagttgttagaaaatggttgtacaaatatcatttct 48944780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 52454107 - 52454164
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||| |||||| ||||||||||||  ||||| |||||||||||||    
T  52454107 tatgagagagaaagttgaacaaaagttgtcacaaattgattgtacaaatatcatttct 52454164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38471700 - 38471644
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttc 57  Q
    |||||||||||||||||||||||| ||||  |||| | |||||| ||||||||||||    
T  38471700 tatgagagagaaaattgtacaaaagttgtaccaaaatggttgtacaaatatcatttc 38471644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6178438 - 6178495
Alignment:
Q  1 tatgagagagaaaattgt-acaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||| |||||| |||||| ||| |||||||| |||||||||||||    
T  6178438 tatgagagagaaaattgtcacaaaagttgtca-aaaatagttgtacaaatatcatttct 6178495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 48405469 - 48405411
Alignment:
Q  1 tatgagagagaaaattgt-acaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| |||||| |||||||||| | |||||| |||||||||||||    
T  48405469 tatgagagagaaagttgttacaaaagttgtcacaaaatggttgtacaaatatcatttct 48405411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 108489 - 108432
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| | |||||| |||||||||||||    
T  108489 tatgagagagaaagttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttct 108432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 462414 - 462471
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| | |||||| |||||||||||||    
T  462414 tatgagagagaaagttgtctaaaagttgtcacaaaatggttgtacaaatatcatttct 462471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1208004 - 1207947
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| |||||||| ||| | |||||||| | |||||||| |||||||||||||    
T  1208004 tatgagagataaaattgttcaacagttgtcacataatagttgtacaaatatcatttct 1207947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1295390 - 1295333
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| ||| |||| ||||| || ||||||| |||||||| |||||||||||||    
T  1295390 tatgagagaaaaagttgtccaaaagttatcacaaaatagttgtacaaatatcatttct 1295333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1901939 - 1901996
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| | |||||| |||||||||||||    
T  1901939 tatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttct 1901996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1911385 - 1911442
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| | |||||| |||||||||||||    
T  1911385 tatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttct 1911442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2482687 - 2482744
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| ||||| |||||||||| | | |||| |||||||||||||    
T  2482687 tatgagagagaaagttgttcaaaagttgtcacaaaatggatgtacaaatatcatttct 2482744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3958031 - 3958088
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||| ||| || ||||||||||||  ||||| |||||||||||||    
T  3958031 tatgagagagaaagttgcacagaagttgtcacaaattgattgtacaaatatcatttct 3958088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14957894 - 14957837
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| ||||||||  |||| |||||||||| | |||||| |||||||||||||    
T  14957894 tatgagagaaaaaattgttaaaaagttgtcacaaagtggttgtacaaatatcatttct 14957837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18169215 - 18169158
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| | |||||| |||||||||||||    
T  18169215 tatgagagagaaatttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 18169158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20216006 - 20215949
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| | |||||| |||||||||||||    
T  20216006 tatgagagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcatttct 20215949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21579172 - 21579115
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||   ||| |||| | ||||| ||||||||||||||||||||    
T  21579172 tatgagagagaaaattgtcataaagttgttagaaattggttgtataaatatcatttct 21579115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34021476 - 34021533
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||| ||||| ||| |||||| ||||||||||||  ||||| |||||||||||||    
T  34021476 tatgagaaagaaagttggacaaaagttgtcacaaattgattgtacaaatatcatttct 34021533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35376564 - 35376621
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| | |||||| |||||||||||||    
T  35376564 tatgagagagaaagttgtctaaaaattgtcacaaaatggttgtacaaatatcatttct 35376621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36925801 - 36925746
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||| ||||| |||||||||| | ||||||||| ||||||||||    
T  36925801 tatgagagagaaaattgttcaaaa-ttgtcacaaa-tggttgtataactatcatttct 36925746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41309058 - 41309005
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcat 54  Q
    ||||||||||||||||||  |||| |||||||||| | |||||| |||||||||    
T  41309058 tatgagagagaaaattgttaaaaaattgtcacaaagtggttgtacaaatatcat 41309005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46473186 - 46473129
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  |||| ||||| |||| | |||||| |||||||||||||    
T  46473186 tatgagagagaaaattgttaaaaagttgtcgcaaagtggttgtacaaatatcatttct 46473129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 49196754 - 49196697
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||   ||| |||||||||| | |||||| |||||||||||||    
T  49196754 tatgagagagaaaattgtcacaaagttgtcacaaaatggttgtacaaatatcatttct 49196697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 53102915 - 53102972
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||| |||| ||||||||||||  | ||| |||||||||||||    
T  53102915 tatgagagagaaagttgtataaaagttgtcacaaattgatcgtacaaatatcatttct 53102972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 53932404 - 53932461
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||| |||| |||| ||||| |||||||||| | |||||| |||||||||||||    
T  53932404 tatgagagtgaaagttgtccaaaaattgtcacaaaatggttgtacaaatatcatttct 53932461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 14771606 - 14771646
Alignment:
Q  19 acaaaacttgtcacaaattagttgtataaatatcatttctt 59  Q
    |||||| ||||||| || |||||||||||||||||||||||    
T  14771606 acaaaaattgtcacgaaatagttgtataaatatcatttctt 14771646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 53473667 - 53473611
Alignment:
Q  2 atgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||| ||| |||||||||| || |||||||||  ||||| |||||||||||||    
T  53473667 atgagagaaaaagttgtacaaaagttatcacaaattgattgtacaaatatcatttct 53473611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7037497 - 7037554
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||    
T  7037497 tatgagagagaaaattgtacaaaagttgtcacaaattggttgtacaaatatcatttct 7037554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 1796423 - 1796367
Alignment:
Q  2 atgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||    
T  1796423 atgagagagaaaattgtacaaaagttgtcacaaattggttgtacaaatatcatttct 1796367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5208340 - 5208397
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||    
T  5208340 tatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttct 5208397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8026766 - 8026823
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||    
T  8026766 tatgagagagaaagttgtacaaaagttgtcacaaattgattgtataaatatcatttct 8026823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3223047 - 3222990
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||||||||||  ||||| |||||||||||||    
T  3223047 tatgagagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttct 3222990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9032838 - 9032781
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||||||||||  ||||| |||||||||||||    
T  9032838 tatgagagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttct 9032781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24235378 - 24235321
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||||||||||  ||||| |||||||||||||    
T  24235378 tatgagagagaaagttgtacaaaaattgtcacaaattgattgtacaaatatcatttct 24235321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27001422 - 27001479
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||||| || |||||||||||| |||||| |||||||||||||    
T  27001422 tatgagagagaaagttgtacagaagttgtcacaaattggttgtacaaatatcatttct 27001479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 47105969 - 47105912
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| || |||||||||| ||||| |||||||||||||    
T  47105969 tatgagagagaaagttgtacaaaagttatcacaaattaattgtacaaatatcatttct 47105912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 51377306 - 51377363
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||| |||||| |||||||||||| |||||| |||||||||||||    
T  51377306 tatgagagagaaagttggacaaaagttgtcacaaattggttgtacaaatatcatttct 51377363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 53662441 - 53662498
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||| ||||| |||||||| |||||||||||||    
T  53662441 tatgagagagaaagttgtacaaaaattgttacaaaatagttgtacaaatatcatttct 53662498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 55268014 - 55268071
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| ||| |||||||||| |||||||||||| |||||| |||||||||||||    
T  55268014 tatgagagataaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttct 55268071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 925075 - 925130
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcattt 56  Q
    ||||||||||||||||||  |||| |||||||||| | ||||||||||||||||||    
T  925075 tatgagagagaaaattgtctaaaagttgtcacaaaatggttgtataaatatcattt 925130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 52487282 - 52487337
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcattt 56  Q
    ||||||||||||| || ||||||| || |||||||||||||||| |||||||||||    
T  52487282 tatgagagagaaagttatacaaaaattatcacaaattagttgtacaaatatcattt 52487337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3475927 - 3475870
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||| ||| | |||||| |||||||||||||    
T  3475927 tatgagagagaaagttgtacaaaagttgtcataaaatggttgtacaaatatcatttct 3475870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4100768 - 4100825
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||||||||  ||||||||| | |||| | |||||||||||||    
T  4100768 tatgagagagaaaattgtacaaaaggtgtcacaaaatggttgaacaaatatcatttct 4100825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 24209800 - 24209857
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  |||| |||||||||| | || |||||||||||||||||    
T  24209800 tatgagagagaaaattgtctaaaaattgtcacaaagtggtcgtataaatatcatttct 24209857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 31221471 - 31221414
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||| |||| ||||||||||||  ||||| |||||||||||||    
T  31221471 tatgagagagaaagttgtataaaagttgtcacaaattgattgtacaaatatcatttct 31221414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34116553 - 34116610
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  |||| |||||||||| | |||||| |||||||||||||    
T  34116553 tatgagagagaaaattgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 34116610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35017211 - 35017154
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| ||| ||||| |||| |||||||||| |||||||| |||||||||||||    
T  35017211 tatgagagataaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttct 35017154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 39449230 - 39449174
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| |||||||| ||||| || ||||||| ||||||||||||||||||||||    
T  39449230 tatgagagaaaaaattgt-caaaagttatcacaaaatagttgtataaatatcatttct 39449174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 44368219 - 44368272
Alignment:
Q  5 agagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| |||||||||| ||||||||||||  ||||| |||||||||||||    
T  44368219 agagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttct 44368272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 46480521 - 46480574
Alignment:
Q  5 agagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||||| ||  ||||||||| ||||| |||||||||||||    
T  46480521 agagagaaaattgtacaaaaattaccacaaattaattgtacaaatatcatttct 46480574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 52669622 - 52669679
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| || |||||||||  ||||| |||||||||||||    
T  52669622 tatgagagagaaagttgtacaaaagttatcacaaattgtttgtacaaatatcatttct 52669679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 47014996 - 47014940
Alignment:
Q  2 atgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||| ||||  |||| |||||||||| |||||||| |||||||||||||    
T  47014996 atgagagagaaagttgtttaaaagttgtcacaaaatagttgtacaaatatcatttct 47014940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25936298 - 25936247
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatc 52  Q
    ||||||||||||| |||| ||||| |||||| ||| ||||||||||||||||    
T  25936298 tatgagagagaaagttgtgcaaaagttgtcaaaaaatagttgtataaatatc 25936247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42815463 - 42815405
Alignment:
Q  1 tatgagagagaaaattgt-acaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| |||||| |||| ||||| |||||||| |||||||||||||    
T  42815463 tatgagagagaaagttgtcacaaaagttgttacaaaatagttgtacaaatatcatttct 42815405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12638883 - 12638826
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||| ||||| |||||||| |||||||||||||    
T  12638883 tatgagagagaaagttgtctaaaaattgttacaaagtagttgtacaaatatcatttct 12638826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 18568832 - 18568885
Alignment:
Q  5 agagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||| ||| |||| ||||| |||||||||| | ||||||||||||||||||||    
T  18568832 agagaaaaagttgtccaaaagttgtcacaaaatggttgtataaatatcatttct 18568885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23347833 - 23347776
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  |||| |||||||||| | | |||| |||||||||||||    
T  23347833 tatgagagagaaaattgttaaaaagttgtcacaaagtggatgtacaaatatcatttct 23347776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 31318811 - 31318754
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||  |||| | |||||| |||||||||||||    
T  31318811 tatgagagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttct 31318754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33438103 - 33438046
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||| |  |||| |||||||||||| ||| || |||||||||||||    
T  33438103 tatgagagagaaaattatctaaaaattgtcacaaattggttttacaaatatcatttct 33438046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34259873 - 34259816
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| ||| | |||||||||| | |||||| |||||||||||||    
T  34259873 tatgagagagaaagttgttcaacagttgtcacaaaatggttgtacaaatatcatttct 34259816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35037667 - 35037610
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||| ||||||||||| ||||  |||| | |||||| |||||||||||||    
T  35037667 tatgagagagaatattgtacaaaagttgtatcaaaatggttgtacaaatatcatttct 35037610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36812416 - 36812473
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| ||||| |||| | ||||| |||||| |||||||||||||    
T  36812416 tatgagagagaaagttgtccaaaagttgttagaaattggttgtacaaatatcatttct 36812473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43358671 - 43358614
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| ||||| |||| | ||||| |||||| |||||||||||||    
T  43358671 tatgagagagaaagttgtccaaaagttgttagaaattggttgtacaaatatcatttct 43358614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 44272823 - 44272880
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||| ||| |||||||| |||||||||||||    
T  44272823 tatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcatttct 44272880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 44571437 - 44571494
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||| |  |||| || | |||||||| |||||||||||||||||||    
T  44571437 tatgagagagaaaattatcaaaaaattattacaaattaattgtataaatatcatttct 44571494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 51039129 - 51039186
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| ||| ||||  |||| |||||||||| |||||||| |||||||||||||    
T  51039129 tatgagagataaagttgtcaaaaagttgtcacaaagtagttgtacaaatatcatttct 51039186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 53384344 - 53384397
Alignment:
Q  5 agagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||||| || | |||||||  ||||| |||||||||||||    
T  53384344 agagagaaaattgtacaaaagttattacaaattgattgtacaaatatcatttct 53384397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 53781850 - 53781906
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||| ||||||||||||| |||| |||| ||||| |||||||| |||||||||||||    
T  53781850 tatgaaagagaaaattgtataaaagttgt-acaaaatagttgtacaaatatcatttct 53781906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 54803341 - 54803398
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||   |||| |||||||| |||||||||||||    
T  54803341 tatgagagagaaagttgtacaaaaattgcaccaaaatagttgtacaaatatcatttct 54803398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 169520 - 169572
Alignment:
Q  6 gagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||  |||| |||||||||| | |||||| |||||||||||||    
T  169520 gagagaaaattgtcaaaaagttgtcacaaaatggttgtacaaatatcatttct 169572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 38888928 - 38888872
Alignment:
Q  4 gagagagaaaattgtacaaaacttgtcacaaat-tagttgtataaatatcatttctt 59  Q
    |||||||||||||||| |||| |||| | |||  |||||||||||||||||||||||    
T  38888928 gagagagaaaattgtataaaaattgttaaaaaaatagttgtataaatatcatttctt 38888872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 41262360 - 41262416
Alignment:
Q  4 gagagagaaaattgta-caaaacttgtcacaaattagttgtataaatatcatttctt 59  Q
    |||||||||||||||  ||||| |||||| ||| ||||||| |||||||||||||||    
T  41262360 gagagagaaaattgttgcaaaaattgtcaaaaaatagttgtttaaatatcatttctt 41262416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20974411 - 20974354
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||    
T  20974411 tatgagagagaaagttgtacaaaagttgtcacaaattagttgtaaaaatatcatttct 20974354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34144564 - 34144621
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||    
T  34144564 tatgagagagaaagttgtacaaaaattgtcacaaattggttgtacaaatatcatttct 34144621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3196100 - 3196157
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||||||||||  ||||| |||||||||||||    
T  3196100 tatgagagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttct 3196157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6746275 - 6746218
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  |||| |||| | ||||||||||||||||||||||||||    
T  6746275 tatgagagagaaaattgttaaaaagttgttaaaaattagttgtataaatatcatttct 6746218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6884968 - 6884911
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||| |||| || |||||||||||||||| |||||||||||||    
T  6884968 tatgagagagaaagttgtataaaagttatcacaaattagttgtacaaatatcatttct 6884911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27307244 - 27307301
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||||||||||  ||||| |||||||||||||    
T  27307244 tatgagagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttct 27307301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 29893664 - 29893611
Alignment:
Q  5 agagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| |||||||||| || |||||||||||||||| |||||||||||||    
T  29893664 agagagaaagttgtacaaaagttatcacaaattagttgtacaaatatcatttct 29893611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3091799 - 3091742
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  |||| || ||||||| |||||||| |||||||||||||    
T  3091799 tatgagagagaaaattgtcaaaaagttatcacaaaatagttgtacaaatatcatttct 3091742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10687999 - 10687942
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||| |||| ||||||||||||  ||||| |||||||||||||    
T  10687999 tatgagagagaaagttgtataaaagttgtcacaaattgtttgtacaaatatcatttct 10687942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13553205 - 13553148
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||| ||||| || ||||||| | |||||| |||||||||||||    
T  13553205 tatgagagagaaaattgtccaaaaattatcacaaagtggttgtacaaatatcatttct 13553148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35171239 - 35171296
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||| ||| |||||||||| | |||||| |||||||||||||    
T  35171239 tatgagagagaaagttgtaccaaaattgtcacaaaatggttgtacaaatatcatttct 35171296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36383520 - 36383463
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||||| |  ||||| |||||||||||||    
T  36383520 tatgagagagaaagttgtacaaaagttgtcacaaaatctttgtacaaatatcatttct 36383463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38246764 - 38246821
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| || ||||||| ||||||||||||  ||||| |||||||||||||    
T  38246764 tatgagagagaaagttctacaaaaattgtcacaaattgattgtacaaatatcatttct 38246821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 44484669 - 44484726
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||| ||||| | |||||| |||||||||||||    
T  44484669 tatgagagagaaagttgtacaaaaattgttacaaaatggttgtacaaatatcatttct 44484726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 14140351 - 14140407
Alignment:
Q  2 atgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||| | ||||  |||| ||||||||||||||||||| |||||||||||||    
T  14140351 atgagagagatagttgtcaaaaagttgtcacaaattagttgtacaaatatcatttct 14140407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 1876302 - 1876357
Alignment:
Q  3 tgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||| ||||| |||| |||| | ||| ||||||||||||||||||||||    
T  1876302 tgagagagaaagttgtaaaaaaattgtgaaaaaatagttgtataaatatcatttct 1876357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30487457 - 30487500
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgta 44  Q
    ||||||||| ||| |||||||||| |||||||||||||||||||    
T  30487457 tatgagagataaagttgtacaaaagttgtcacaaattagttgta 30487500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 30487496 - 30487539
Alignment:
Q  15 ttgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||| |||||||||||| |||||| |||||||||||||    
T  30487496 ttgtacaaaagttgtcacaaattggttgtacaaatatcatttct 30487539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 44085324 - 44085277
Alignment:
Q  9 agaaaattgtacaaaacttgtcacaaattagttgtataaatatcattt 56  Q
    |||||||||| ||||| |||||||||| || |||||||||||||||||    
T  44085324 agaaaattgtccaaaaattgtcacaaaataattgtataaatatcattt 44085277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43621961 - 43622015
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatt 55  Q
    ||||||||||||| |||| ||||| |||||| ||| |||||||| ||||||||||    
T  43621961 tatgagagagaaagttgttcaaaagttgtcataaaatagttgtacaaatatcatt 43622015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6365244 - 6365187
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||| |||||||||||||  |||| |||||||||| | |||||| |||||||||||||    
T  6365244 tatgtgagagaaaattgtcaaaaaattgtcacaaagtggttgtacaaatatcatttct 6365187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15283263 - 15283320
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| | |||||| |||||||||||||    
T  15283263 tatgagagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcatttct 15283320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28165187 - 28165130
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  |||| |||||||||| | |||||| || ||||||||||    
T  28165187 tatgagagagaaaattgtctaaaagttgtcacaaaatggttgtacaagtatcatttct 28165130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29168783 - 29168726
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| ||||| |||||| ||| | |||||| |||||||||||||    
T  29168783 tatgagagagaaagttgtgcaaaagttgtcaaaaaatggttgtacaaatatcatttct 29168726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30856865 - 30856808
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| | |||||| |||||||||||||    
T  30856865 tatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttct 30856808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36909856 - 36909913
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||| |||||||| |||| ||||| |||||||||| | |||||| |||||||||||||    
T  36909856 tatgtgagagaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcatttct 36909913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39737699 - 39737756
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| ||||| |||| | ||||| |||||| |||||||||||||    
T  39737699 tatgagagagaaagttgtccaaaagttgttagaaattggttgtacaaatatcatttct 39737756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5167753 - 5167812
Alignment:
Q  1 tatgagagagaaaattgt--acaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  | |||| |||||||||| | |||||| |||||||||||||    
T  5167753 tatgagagagaaaattgtctaaaaaaattgtcacaaagtggttgtacaaatatcatttct 5167812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7428487 - 7428434
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||| ||||    ||||||| |||||||| |||||||||||||    
T  7428487 tatgagagagaaaattgtaaaaaa----tcacaaaatagttgtacaaatatcatttct 7428434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7371961 - 7372018
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||    
T  7371961 tatgagagagaaaattgtacaaaaattgtcataaattagttgtacaaatatcatttct 7372018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25995518 - 25995461
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||||||||||||||||  ||||| |||||||||||||    
T  25995518 tatgagagagaaagttgtacaaaacttgtcacaaattgattgtacaaatatcatttct 25995461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 6829797 - 6829853
Alignment:
Q  2 atgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||| ||| |||||||||| ||||||||||||||||||| |||||||||||||    
T  6829797 atgagagataaagttgtacaaaagttgtcacaaattagttgtacaaatatcatttct 6829853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13813616 - 13813559
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||||| || |||||||||||| |||||| |||||||||||||    
T  13813616 tatgagagagaaagttgtacagaagttgtcacaaattggttgtacaaatatcatttct 13813559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18610831 - 18610774
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||| |||| |||||||||| |||||||| |||||||||||||    
T  18610831 tatgagagagaaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttct 18610774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25130761 - 25130706
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcattt 56  Q
    ||||||||||||| |||||||||| ||||||||||||  ||||| |||||||||||    
T  25130761 tatgagagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcattt 25130706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18959062 - 18959004
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttctt 59  Q
    ||||||||||||||||||  |||| |||| ||||| | |||||||||||||||||||||    
T  18959062 tatgagagagaaaattgtcaaaaagttgtaacaaaatggttgtataaatatcatttctt 18959004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3291438 - 3291495
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||| |||||||||||||||||| |||| |||||||| |||||  ||||||||||||    
T  3291438 tatgaaagagaaaattgtacaaaagttgtaacaaattaattgtacgaatatcatttct 3291495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7078513 - 7078570
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| ||||| |||||||||| ||| |||| |||||||||||||    
T  7078513 tatgagagagaaagttgttcaaaagttgtcacaaaatagatgtacaaatatcatttct 7078570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26585186 - 26585243
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| ||| |||||||||| || ||||||| |||||||| |||||||||||||    
T  26585186 tatgagagaaaaagttgtacaaaagttatcacaaaatagttgtacaaatatcatttct 26585243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 27578236 - 27578183
Alignment:
Q  5 agagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| |||||||||| ||||| ||||||| ||||| |||||||||||||    
T  27578236 agagagaaagttgtacaaaagttgtcccaaattaattgtacaaatatcatttct 27578183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27787547 - 27787490
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| | |||||||| ||||  |||||| ||||||||||||||||||||    
T  27787547 tatgagagagaaagtcgtacaaaagttgtaccaaattggttgtataaatatcatttct 27787490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30530587 - 30530644
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| | ||||||||||||||||||||    
T  30530587 tatgagagagaaagttgtctaaaagttgtcacaaaatggttgtataaatatcatttct 30530644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 32821693 - 32821636
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  |||| |||||||||| | |||||| |||||||||||||    
T  32821693 tatgagagagaaaattgtttaaaagttgtcacaaagtggttgtacaaatatcatttct 32821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35972817 - 35972874
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||||| | |||| | |||||||||||||    
T  35972817 tatgagagagaaagttgtacaaaagttgtcacaaaatggttgaacaaatatcatttct 35972874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42256518 - 42256461
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||| ||| |||||||||| | |||||| |||||||||||||    
T  42256518 tatgagagagaaagttgtaccaaagttgtcacaaaatggttgtacaaatatcatttct 42256461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50145814 - 50145869
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcattt 56  Q
    |||||||||||||||| | ||||| |||||||||| |||||||| |||||| ||||    
T  50145814 tatgagagagaaaattattcaaaagttgtcacaaaatagttgtacaaatattattt 50145869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 740968 - 741026
Alignment:
Q  1 tatgagagagaaaattgt-acaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||| ||| |||||| |||| | ||| ||||||||||||||||||||||    
T  740968 tatgagagagaaaaatgtcacaaaagttgttagaaaatagttgtataaatatcatttct 741026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9011703 - 9011646
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||  ||| |||||||||| | |||||| |||||||||||||    
T  9011703 tatgagagagaaagttgtatcaaagttgtcacaaaatggttgtacaaatatcatttct 9011646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11097897 - 11097954
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| ||||| |||||||||| | | |||| |||||||||||||    
T  11097897 tatgagagagaaagttgttcaaaagttgtcacaaaatggatgtacaaatatcatttct 11097954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12999835 - 12999892
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||| | ||| | |||||| |||||||||||||    
T  12999835 tatgagagagaaagttgtacaaaagttgttagaaaatggttgtacaaatatcatttct 12999892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15061903 - 15061846
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  |||| |||||||||| | ||| || |||||||||||||    
T  15061903 tatgagagagaaaattgtcaaaaagttgtcacaaagtggttatacaaatatcatttct 15061846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19651468 - 19651411
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| || ||||||| |||||||||| | ||||||  ||||||||||||    
T  19651468 tatgagagagaaagttatacaaaagttgtcacaaaatggttgtaggaatatcatttct 19651411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21854477 - 21854534
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||  |||| || ||||| |||||||||||||    
T  21854477 tatgagagagaaagttgtacaaaagttgtaccaaaataattgtacaaatatcatttct 21854534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 22674770 - 22674713
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||   ||| |||||||| |||||||||||||    
T  22674770 tatgagagagaaagttgtacaaaaattgtacaaaaatagttgtacaaatatcatttct 22674713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26547292 - 26547235
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| ||||| |||||||||| ||  |||| |||||||||||||    
T  26547292 tatgagagagaaagttgttcaaaaattgtcacaaaatatatgtacaaatatcatttct 26547235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27352688 - 27352631
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| ||||| || ||||||| | |||||| |||||||||||||    
T  27352688 tatgagagagaaagttgtccaaaagttatcacaaaatggttgtacaaatatcatttct 27352631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29489372 - 29489429
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||| ||| || ||||||| | |||||| |||||||||||||    
T  29489372 tatgagagagaaagttgtaccaaagttatcacaaaatggttgtacaaatatcatttct 29489429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 32938913 - 32938860
Alignment:
Q  5 agagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| ||||  |||| ||||||||||||| ||||| |||||||||||||    
T  32938913 agagagaaagttgttaaaaaattgtcacaaattaattgtacaaatatcatttct 32938860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36669383 - 36669440
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| ||| |||||||||| || |||||||||  ||||| |||||||||||||    
T  36669383 tatgagagaaaaagttgtacaaaaattatcacaaattgattgtacaaatatcatttct 36669440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46902671 - 46902614
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| ||||| |||||||||| ||||| || || ||||||||||    
T  46902671 tatgagagagaaagttgtccaaaaattgtcacaaaatagttatacaagtatcatttct 46902614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 48872964 - 48873020
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| || | ||||| |||||||||| | ||||||||||||||||||||    
T  48872964 tatgagagagaaagttct-caaaagttgtcacaaagtggttgtataaatatcatttct 48873020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 50226892 - 50226949
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| | |||||| |||||||||||||    
T  50226892 tatgagagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 50226949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 50528070 - 50528127
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| ||||||||  |||| ||||||||||||  ||||| |||||||||||||    
T  50528070 tatgagagaaaaaattgtctaaaagttgtcacaaattgattgtacaaatatcatttct 50528127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9882672 - 9882732
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttcttag 61  Q
    ||||||||| ||| ||||  |||  |||||||||| |||||||| ||||||||||||||||    
T  9882672 tatgagagataaagttgtcaaaatgttgtcacaaaatagttgtacaaatatcatttcttag 9882732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37325832 - 37325890
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttctt 59  Q
    ||||| |||||||||||||||||| |||||||||||| |||||| ||||||||||||||    
T  37325832 tatgaaagagaaaattgtacaaaagttgtcacaaattggttgtacaaatatcatttctt 37325890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30864430 - 30864487
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||    
T  30864430 tatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttct 30864487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 116689 - 116632
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||| ||| ||| |||||| ||||||||||||||||||||||    
T  116689 tatgagagagaaagttgtaccaaagttggcacaaaatagttgtataaatatcatttct 116632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33050241 - 33050184
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||||| | |||||| |||||||||||||    
T  33050241 tatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttct 33050184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 42431773 - 42431724
Alignment:
Q  9 agaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  42431773 agaaaattgtacaaaagttatcacaaattaggtgtataaatatcatttct 42431724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 47530305 - 47530361
Alignment:
Q  2 atgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||| ||||| |||||| ||| | ||||||||||||||||||||    
T  47530305 atgagagagaaaattgttcaaaagttgtcataaaatggttgtataaatatcatttct 47530361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37385246 - 37385301
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcattt 56  Q
    ||||||||||||| |||||||||| |||||| ||| |||||||| |||||||||||    
T  37385246 tatgagagagaaagttgtacaaaagttgtcaaaaaatagttgtacaaatatcattt 37385301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43255580 - 43255634
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatt 55  Q
    ||||||| |||||||||||||||| |||||||||| || ||||| ||||||||||    
T  43255580 tatgagaaagaaaattgtacaaaaattgtcacaaaataattgtacaaatatcatt 43255634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2347072 - 2347129
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||| ||| |||||||||| | |||||| |||||||||||||    
T  2347072 tatgagagagaaagttgtaccaaagttgtcacaaaatggttgtacaaatatcatttct 2347129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4971348 - 4971291
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||| |||| |||||||||| | |||||| |||||||||||||    
T  4971348 tatgagagagaaagttgtataaaagttgtcacaaaatggttgtacaaatatcatttct 4971291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26153703 - 26153647
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||| ||||| |||||| ||| |||||||| |||||||||||||    
T  26153703 tatgagagagaaaattgt-caaaagttgtcataaaatagttgtacaaatatcatttct 26153647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27164850 - 27164907
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| || ||||||| ||||||||||||  ||||| |||||||||||||    
T  27164850 tatgagagagaaagttatacaaaagttgtcacaaattgattgtacaaatatcatttct 27164907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28548234 - 28548291
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||  |||| |||||||| |||||||||||||    
T  28548234 tatgagagagaaagttgtacaaaagttgtaccaaaatagttgtacaaatatcatttct 28548291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29162292 - 29162349
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| || ||||||| ||||||||||||  ||||| |||||||||||||    
T  29162292 tatgagagagaaagttatacaaaagttgtcacaaattgattgtacaaatatcatttct 29162349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37969989 - 37969932
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||  |||| |||||||| |||||||||||||    
T  37969989 tatgagagagaaagttgtacaaaagttgtatcaaaatagttgtacaaatatcatttct 37969932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34304691 - 34304746
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcattt 56  Q
    ||||||||||||||||||  |||| |||||| ||| |||||||| |||||||||||    
T  34304691 tatgagagagaaaattgtctaaaaattgtcaaaaaatagttgtacaaatatcattt 34304746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30061340 - 30061282
Alignment:
Q  1 tatgagagagaaaattgt-acaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||| |||||| |||||| ||| |||||||  |||||||||||||    
T  30061340 tatgagagagaaaattgtcacaaaaattgtcaaaaaatagttgttaaaatatcatttct 30061282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 46725655 - 46725617
Alignment:
Q  21 aaaacttgtcacaaattagttgtataaatatcatttctt 59  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  46725655 aaaagttgtcacaaaatagttgtataaatatcatttctt 46725617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3040470 - 3040413
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||| ||||| || ||||||| |||||||||||| |||||| |||||| ||||||    
T  3040470 tatgagaaagaaagttatacaaaagttgtcacaaattggttgtacaaatataatttct 3040413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10656690 - 10656633
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||| ||||||||||  |||| |||||| ||||| |||||| |||||||||||||    
T  10656690 tatgagaaagaaaattgttaaaaagttgtcagaaattggttgtacaaatatcatttct 10656633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19426638 - 19426581
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| | |||||| |||||||||||||    
T  19426638 tatgagagagaaagttgtcaaaaagttgtcacaaaatggttgtacaaatatcatttct 19426581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 19880248 - 19880301
Alignment:
Q  5 agagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||| ||| |||||||||| |||||||||||| |||||| ||| |||||||||    
T  19880248 agagataaagttgtacaaaagttgtcacaaattggttgtacaaacatcatttct 19880301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 22692142 - 22692085
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  |||| |||||| ||| | |||||| |||||||||||||    
T  22692142 tatgagagagaaaattgtttaaaagttgtcataaaatggttgtacaaatatcatttct 22692085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 28596961 - 28596908
Alignment:
Q  4 gagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttc 57  Q
    |||||||||| ||||| |||| |||||||||| | |||||| ||||||||||||    
T  28596961 gagagagaaagttgtaaaaaagttgtcacaaagtggttgtacaaatatcatttc 28596908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29763888 - 29763831
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||| ||||| |||||||||| || ||||||| | |||||| |||||||||||||    
T  29763888 tatgagaaagaaagttgtacaaaagttatcacaaaatggttgtacaaatatcatttct 29763831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30538684 - 30538627
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||  |||| | |||||| |||||||||||||    
T  30538684 tatgagagagaaagttgtacaaaagttgtaccaaaattgttgtacaaatatcatttct 30538627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 32933605 - 32933549
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  |||| |||||||||| || ||||| |||||||||||||    
T  32933605 tatgagagagaaaattgtcaaaaatttgtcacaaa-taattgtacaaatatcatttct 32933549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35212968 - 35213025
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||  |||| || ||||| |||||||||||||    
T  35212968 tatgagagagaaagttgtacaaaaattgtagcaaaataattgtacaaatatcatttct 35213025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40693541 - 40693598
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||| ||| |||||||| |||||||||||||    
T  40693541 tatgagagagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttct 40693598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43079645 - 43079702
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| ||||| || ||||||| | |||||| |||||||||||||    
T  43079645 tatgagagagaaagttgtccaaaaattatcacaaagtggttgtacaaatatcatttct 43079702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44511197 - 44511140
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||| ||||||| |||||||||| |||||||||| | ||||||  ||||||||||||    
T  44511197 tatgaaagagaaagttgtacaaaagttgtcacaaaatggttgtacgaatatcatttct 44511140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30927944 - 30928001
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||    
T  30927944 tatgagagagaaagttgtacaaaaattgtcacaaattggttgtacaaatatcatttct 30928001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41293734 - 41293791
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||    
T  41293734 tatgagagagaaagttgtacaaaagttgtcacaaattggttgtaaaaatatcatttct 41293791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1065475 - 1065418
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||||| || |||||||||||| |||||| |||||||||||||    
T  1065475 tatgagagagaaagttgtacagaagttgtcacaaattggttgtacaaatatcatttct 1065418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20288591 - 20288534
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||  ||||||||| |||||||||||| |||||| |||||||||||||    
T  20288591 tatgagagagaaagatgtacaaaagttgtcacaaattggttgtacaaatatcatttct 20288534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21075220 - 21075163
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||  ||||||||| |||||||||||| |||||| |||||||||||||    
T  21075220 tatgagagagaaagatgtacaaaagttgtcacaaattggttgtacaaatatcatttct 21075163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41273573 - 41273516
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||||||||||  ||||| |||||||||||||    
T  41273573 tatgagagagaaagttgtacaaaagttgtcacaaattgtttgtacaaatatcatttct 41273516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14228765 - 14228710
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcattt 56  Q
    ||||||||||||| |||||||||| || ||||||| |||||||| |||||||||||    
T  14228765 tatgagagagaaagttgtacaaaagttatcacaaaatagttgtacaaatatcattt 14228710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6005002 - 6004945
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| |||||||| |||||||||||||    
T  6005002 tatgagagagaaagttgtctaaaaattgtcacaaagtagttgtacaaatatcatttct 6004945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32185674 - 32185727
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcat 54  Q
    ||||||||||||| |||||||||| |||||||||||| |||||| | |||||||    
T  32185674 tatgagagagaaagttgtacaaaagttgtcacaaattggttgtacagatatcat 32185727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36064088 - 36064031
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||| ||||| |||||||||| |  ||||| |||||||||||||    
T  36064088 tatgagagagaaaattgtccaaaagttgtcacaaaatgattgtacaaatatcatttct 36064031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36497719 - 36497662
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| |||||||| |||||||||||||    
T  36497719 tatgagagagaaagttgtctaaaagttgtcacaaaatagttgtacaaatatcatttct 36497662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40380339 - 40380282
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||| ||| ||| |||| |||||||||||||    
T  40380339 tatgagagagaaagttgtacaaaagttgtcataaaatagatgtacaaatatcatttct 40380282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44712036 - 44711979
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  |||| || | |||||||| |||||||||||||||||||    
T  44712036 tatgagagagaaaattgtcaaaaaattattacaaattaattgtataaatatcatttct 44711979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21648944 - 21649000
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttc 57  Q
    ||||||||||||| ||||  |||| |||||||||||| |||||| ||||||||||||    
T  21648944 tatgagagagaaagttgttaaaaagttgtcacaaattggttgtacaaatatcatttc 21649000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 43186354 - 43186298
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttc 57  Q
    ||||||||||||| |||||||||| || ||||||| || ||||| ||||||||||||    
T  43186354 tatgagagagaaagttgtacaaaaattatcacaaaataattgtacaaatatcatttc 43186298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 2621825 - 2621786
Alignment:
Q  19 acaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||| || ||||||||||||||||||||||||||||||    
T  2621825 acaaaagttatcacaaattagttgtataaatatcatttct 2621786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 6656362 - 6656413
Alignment:
Q  5 agagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcattt 56  Q
    ||||||||| |||||||||| |||||||||||| ||| || |||||||||||    
T  6656362 agagagaaagttgtacaaaagttgtcacaaattggttctacaaatatcattt 6656413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 6736764 - 6736815
Alignment:
Q  5 agagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcattt 56  Q
    ||||||||| |||||||||| |||||||||||| ||| || |||||||||||    
T  6736764 agagagaaagttgtacaaaagttgtcacaaattggttctacaaatatcattt 6736815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6746062 - 6746117
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcattt 56  Q
    ||||||||||||| |||||||||| |||||||||||| ||| || |||||| ||||    
T  6746062 tatgagagagaaagttgtacaaaagttgtcacaaattggttctacaaatattattt 6746117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 41746864 - 41746821
Alignment:
Q  15 ttgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||| |||||||| |||||||||| |||||||||||||    
T  41746864 ttgtacaaaagttgtcacagattagttgtacaaatatcatttct 41746821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7376564 - 7376507
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| ||||| |||| | ||||| |||||| |||||||||||||    
T  7376564 tatgagagagaaagttgttcaaaagttgttagaaattggttgtacaaatatcatttct 7376507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 12697728 - 12697781
Alignment:
Q  3 tgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcattt 56  Q
    ||||||||||| |||| ||||| || ||| ||| ||||||||||||||||||||    
T  12697728 tgagagagaaagttgttcaaaaattatcataaaatagttgtataaatatcattt 12697781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14531679 - 14531622
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||| ||||||| |||||||||| || ||| ||| |||||||| |||||||||||||    
T  14531679 tatgaaagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcatttct 14531622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 20995071 - 20995128
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||  |||||||||| |||||| ||| | | ||||||||||||||||||    
T  20995071 tatgagagagaaggttgtacaaaaattgtcataaaatggatgtataaatatcatttct 20995128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28156261 - 28156204
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||  |||| | |||||| |||||||||||||    
T  28156261 tatgagagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttct 28156204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28927739 - 28927682
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| ||||||||  |||| |||||||||| | |||||| |||||||||||||    
T  28927739 tatgagagaaaaaattgttaaaaagttgtcacaaagtggttgtacaaatatcatttct 28927682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33635640 - 33635583
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||| ||||||| |||||||||  || |  |||||||||||||||||||||||||||    
T  33635640 tatgaaagagaaagttgtacaaagattataccaaattagttgtataaatatcatttct 33635583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37562154 - 37562211
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||| | |||||||| |||||||||||||    
T  37562154 tatgagagagaaagttgtctaaaagttgtcacataatagttgtacaaatatcatttct 37562211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37784387 - 37784444
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||||||||| || |  |||| | |||||| |||||||||||||    
T  37784387 tatgagagagaaaattgtacaaaagttataccaaaatggttgtacaaatatcatttct 37784444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42012603 - 42012660
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| || ||| ||| ||||||||||||||||||||||    
T  42012603 tatgagagagaaagttgtcaaaaagttatcataaagtagttgtataaatatcatttct 42012660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42047393 - 42047336
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  |||  ||||| |||| |||||||| |||||||||||||    
T  42047393 tatgagagagaaaattgtcaaaagattgtcccaaagtagttgtacaaatatcatttct 42047336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 45101454 - 45101397
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| | |||||| |||||||||||||    
T  45101454 tatgagagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 45101397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 31731461 - 31731493
Alignment:
Q  26 ttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||| ||||||||||||||||||||||||||    
T  31731461 ttgtcataaattagttgtataaatatcatttct 31731493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 35937526 - 35937582
Alignment:
Q  2 atgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||| |||| ||||| |||| ||||| | |||||| |||||||||||||    
T  35937526 atgagagagaaagttgtccaaaagttgttacaaaatggttgtacaaatatcatttct 35937582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40614203 - 40614259
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttc 57  Q
    ||||||||| | |||||| ||||| || ||| ||| |||||||||||||||||||||    
T  40614203 tatgagagatataattgttcaaaaattatcataaagtagttgtataaatatcatttc 40614259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 43419912 - 43419880
Alignment:
Q  26 ttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||| |||||||||||||    
T  43419912 ttgtcacaaattagttgtacaaatatcatttct 43419880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3263521 - 3263578
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| |||||||||||||| |||||||||||| |||||| |||||||||||||    
T  3263521 tatgagagaaaaaattgtacaaaagttgtcacaaattggttgtacaaatatcatttct 3263578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9594536 - 9594479
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||    
T  9594536 tatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttct 9594479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9599741 - 9599798
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||    
T  9599741 tatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttct 9599798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30574390 - 30574447
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||    
T  30574390 tatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttct 30574447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4954524 - 4954467
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||||| || ||||||||||||| ||||| |||||||||||||    
T  4954524 tatgagagagaaagttgtacataagttgtcacaaattaattgtacaaatatcatttct 4954467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38010930 - 38010873
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||||||||| || |||||||||  ||||| |||||||||||||    
T  38010930 tatgagagagaaaattgtacaaaagttatcacaaattgattgtacaaatatcatttct 38010873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11464135 - 11464190
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcattt 56  Q
    ||||||| |||||||||||||||| || ||||||||| |||||| |||||||||||    
T  11464135 tatgagaaagaaaattgtacaaaagttatcacaaattggttgtacaaatatcattt 11464190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9939444 - 9939502
Alignment:
Q  1 tatgagagagaaaattgt-acaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||| ||||||||||| ||||| | || |||||||||||||||||    
T  9939444 tatgagagagaaaattgtcacaaaacttgttacaaaatggtagtataaatatcatttct 9939502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 27271067 - 27271121
Alignment:
Q  4 gagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||||| |||||| ||||| ||| || |||||||||||||    
T  27271067 gagagagaaaattgtacaaaaattgtcataaattggttttacaaatatcatttct 27271121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 582880 - 582937
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  |||| || ||||||| |||||||| |||||||||||||    
T  582880 tatgagagagaaaattgtttaaaagttatcacaaaatagttgtaaaaatatcatttct 582937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15918003 - 15918060
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| ||| || ||||||| ||||||||||||| ||||| |||||||||||||    
T  15918003 tatgagagataaagttatacaaaagttgtcacaaattaattgtacaaatatcatttct 15918060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27440537 - 27440480
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||| ||||| |||||||||| |  ||||| |||||||||||||    
T  27440537 tatgagagagaaaattgttcaaaagttgtcacaaaatgattgtacaaatatcatttct 27440480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 32634766 - 32634709
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||| |||  ||||| |||||||||||||    
T  32634766 tatgagagagaaagttgtacaaaagttgtcacagattgattgtacaaatatcatttct 32634709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3154656 - 3154710
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatt 55  Q
    ||||||||||||| |||||||||| || ||| ||| |||||||| ||||||||||    
T  3154656 tatgagagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcatt 3154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9596827 - 9596877
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatat 51  Q
    ||||||||| ||| |||||||||| |||||||||||| |||||| ||||||    
T  9596827 tatgagagacaaagttgtacaaaagttgtcacaaattggttgtacaaatat 9596877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 12512854 - 12512804
Alignment:
Q  8 gagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||| |||||||||| |||||||||||| |||| | |||||||||||||    
T  12512854 gagaaagttgtacaaaaattgtcacaaattggttgcacaaatatcatttct 12512804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1108039 - 1107982
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| ||| |||||||||| |||| ||||| |||| ||| |||||||||||||    
T  1108039 tatgagagataaagttgtacaaaagttgtaacaaaatagtcgtacaaatatcatttct 1107982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5996725 - 5996668
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  |||| |||| | ||| |||||||| |||||||||||||    
T  5996725 tatgagagagaaaattgtctaaaaattgttaaaaaatagttgtacaaatatcatttct 5996668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8959218 - 8959161
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||| | |||| ||||| |||||||| | |||||||| |||||||||||||    
T  8959218 tatgagagagacagttgtccaaaagttgtcacataatagttgtacaaatatcatttct 8959161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12401250 - 12401193
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||| |||| |||| |||||||  ||||| |||||||||||||    
T  12401250 tatgagagagaaagttgtaaaaaagttgttacaaattgattgtacaaatatcatttct 12401193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12718393 - 12718450
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| ||| ||||  |||| |||||||||||| |||||| |||||||||||||    
T  12718393 tatgagagataaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttct 12718450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12779619 - 12779676
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| ||| ||||  |||| |||||||||||| |||||| |||||||||||||    
T  12779619 tatgagagataaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttct 12779676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15622102 - 15622045
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||||| || |||||||||||| ||| || |||||| ||||||    
T  15622102 tatgagagagaaagttgtacagaagttgtcacaaattggttatacaaatattatttct 15622045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 24329995 - 24330052
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||  |||| || ||||| |||||||||||||    
T  24329995 tatgagagagaaagttgtacaaaagttgtaccaaaataattgtacaaatatcatttct 24330052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29803283 - 29803226
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||| ||| |||||||| |||||||||||||    
T  29803283 tatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcatttct 29803226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32379942 - 32379999
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| ||||| |||||| ||| |||||||| ||||| |||||||    
T  32379942 tatgagagagaaagttgttcaaaagttgtcataaactagttgtacaaataccatttct 32379999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34381070 - 34381013
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| | |||||| |||||||||||||    
T  34381070 tatgagagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 34381013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 39595330 - 39595273
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||| | |||||| |||||||||||||    
T  39595330 tatgagagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 39595273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39788719 - 39788776
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||| ||||| |||||||| | | |||||| |||||||||||||    
T  39788719 tatgagagagaaagttgtccaaaagttgtcacataatggttgtacaaatatcatttct 39788776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 1510 - 1566
Alignment:
Q  2 atgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||||||| |||||||||||| ||| || |||||||||||||    
T  1510 atgagagagaaaattgtacaaaagttgtcacaaattggttatacaaatatcatttct 1566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18653 - 18596
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| || ||||||||| |||||| |||||||||||||    
T  18653 tatgagagagaaagttgtacaaaagttatcacaaattggttgtacaaatatcatttct 18596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 147269 - 147326
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||| | |||||||||||    
T  147269 tatgagagagaaagttgtacaaaagttgtcacaaattaattgtacagatatcatttct 147326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 440776 - 440719
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||| ||| |||||||| |||||||||||||    
T  440776 tatgagagagaaagttgtctaaaagttgtcataaagtagttgtacaaatatcatttct 440719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2056841 - 2056784
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| | |||||||| |||||||||||| |||||| |||||||||||||    
T  2056841 tatgagagagaaagtagtacaaaagttgtcacaaattggttgtacaaatatcatttct 2056784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3339512 - 3339569
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| |||||||||| | |||||| |||||||||||||    
T  3339512 tatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttct 3339569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3660366 - 3660423
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| |||||||||||||| |||||||||||| |||||| |||||| ||||||    
T  3660366 tatgagagaaaaaattgtacaaaagttgtcacaaattggttgtacaaatataatttct 3660423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9954606 - 9954549
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||||||||| |||||| |||||||||||||    
T  9954606 tatgagagagaaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttct 9954549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12044390 - 12044333
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||  |||| |||||| ||| ||||||||||||||||||||||    
T  12044390 tatgagagagaaagttgtctaaaagttgtcaaaaaatagttgtataaatatcatttct 12044333  T

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Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25995500 - 25995443
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||| |||||| | |||||| |||||||||||||    
T  25995500 tatgagagagaaagttgtacaaaaattgccacaaaatggttgtacaaatatcatttct 25995443  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11017441 - 11017384
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||||| ||||  ||||| |||||| ||||||    
T  11017441 tatgagagagaaagttgtacaaaagttgtcacgaattgattgtacaaatattatttct 11017384  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 17902709 - 17902762
Alignment:
Q  5 agagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| ||||| |||| |||||| ||||||||| || |||||||||||||    
T  17902709 agagagaaagttgtataaaagttgtcataaattagttatacaaatatcatttct 17902762  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25554303 - 25554246
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||| |||| ||| |||||| | |||||| |||||||||||||    
T  25554303 tatgagagagaaagttgtaaaaaaattgccacaaaatggttgtacaaatatcatttct 25554246  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26094963 - 26094906
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||| ||| |||||||||| ||| |||||| | |||||| |||||||||||||    
T  26094963 tatgagagataaagttgtacaaaaattgccacaaaatggttgtacaaatatcatttct 26094906  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27334916 - 27334859
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||  |||| || ||||||| |||||||||| |||||||| |||||||||||||    
T  27334916 tatgagaaggaaagttatacaaaagttgtcacaaaatagttgtacaaatatcatttct 27334859  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27395656 - 27395599
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||  |||| || ||||||| |||||||||| |||||||| |||||||||||||    
T  27395656 tatgagaaggaaagttatacaaaagttgtcacaaaatagttgtacaaatatcatttct 27395599  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30796088 - 30796145
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||| ||||||| ||||| |||| |||||||||| | |||||| |||||||||||||    
T  30796088 tatgaaagagaaagttgtaaaaaaattgtcacaaagtggttgtacaaatatcatttct 30796145  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32457265 - 32457322
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||| |||||||||||||  |||| |||||||||| | |||||| |||||||||||||    
T  32457265 tatgtgagagaaaattgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 32457322  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 32729947 - 32729890
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| ||||| |||| |||||| ||| | |||||| |||||||||||||    
T  32729947 tatgagagagaaagttgtataaaagttgtcagaaaatggttgtacaaatatcatttct 32729890  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 88862 - 88809
Alignment:
Q  5 agagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||| |||| || ||||||||| |||||| |||||||||||||    
T  88862 agagagaaaattgtataaaagttatcacaaattggttgtacaaatatcatttct 88809  T

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Target: scaffold0662 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 1135 - 1079
Alignment:
Q  2 atgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||| ||||  |||| |||||||||| |||||||| |||||||||||||    
T  1135 atgagagagaaagttgtttaaaagttgtcacaaaatagttgtacaaatatcatttct 1079  T

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Target: scaffold0131 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 15549 - 15604
Alignment:
Q  3 tgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||  |||| |||||||||| | |||||| |||||||||||||    
T  15549 tgagagagaaaattgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 15604  T

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Target: scaffold0618 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3418 - 3361
Alignment:
Q  1 tatgagagagaaaattgtacaaaactt-gtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||||||||| || || ||||||||||||||  ||||||||||||    
T  3418 tatgagagagaaaattgtacaaaaattagtaacaaattagttgta-caatatcatttct 3361  T

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Target: scaffold0651 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4859 - 4916
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| ||||  |||| | |||||| |||||||||||||    
T  4859 tatgagagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttct 4916  T

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Target: scaffold0592 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 968 - 911
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||| ||||||| || |  |||||| |||||| |||||||||||||    
T  968 tatgagagagaaaattatacaaaaattatatcaaattggttgtacaaatatcatttct 911  T

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Target: scaffold0508 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11549 - 11606
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||||||||  | || |||||||||| ||| |||| |||||||||||||    
T  11549 tatgagagagaaaattgtcaagaagttgtcacaaagtagatgtacaaatatcatttct 11606  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 72424 - 72367
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    |||||||||||||||||| ||||| ||||  |||| | |||||| |||||||||||||    
T  72424 tatgagagagaaaattgttcaaaagttgttgcaaaatggttgtacaaatatcatttct 72367  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 249155 - 249212
Alignment:
Q  1 tatgagagagaaaattgtacaaaacttgtcacaaattagttgtataaatatcatttct 58  Q
    ||||||||||||| |||||||||| || |||||||||  ||||  |||||||||||||    
T  249155 tatgagagagaaagttgtacaaaagttatcacaaattgattgtgcaaatatcatttct 249212  T

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Target: scaffold0174 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34806 - 34862
Alignment:
Q  1 tatgagagagaaaattgt-acaaaacttgtcacaaattagttgtataaatatcattt 56  Q
    ||||||||||||| |||| | |||| ||||||||||||| ||||| |||||||||||    
T  34806 tatgagagagaaagttgtcataaaaattgtcacaaattaattgtacaaatatcattt 34862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 31059 - 31129
Alignment:
Q  164 tgtccttttgtcactttctcatatg--agcacatgttattgccccattgtgtgctggtccctttctagttct 233  Q
    ||||||||||||||||||||| |||   ||||||||| ||||||||||||| ||| || | |||||||||||    
T  31059 tgtccttttgtcactttctcaaatgtctgcacatgttcttgccccattgtgggcttgt-catttctagttct 31129  T

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