View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7850_low_39 (Length: 363)

Name: NF7850_low_39
Description: NF7850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7850_low_39
NF7850_low_39
[»] chr5 (5 HSPs)
chr5 (17-347)||(24199482-24199797)
chr5 (28-70)||(2063698-2063740)
chr5 (28-62)||(29434154-29434188)
chr5 (28-65)||(95470-95507)
chr5 (21-58)||(27560666-27560703)
[»] chr2 (7 HSPs)
chr2 (20-82)||(11064444-11064506)
chr2 (20-64)||(5137306-5137350)
chr2 (25-65)||(13982515-13982555)
chr2 (28-65)||(2029847-2029884)
chr2 (28-65)||(14466379-14466416)
chr2 (28-65)||(16419345-16419382)
chr2 (21-61)||(3185961-3186001)
[»] chr4 (6 HSPs)
chr4 (20-66)||(49190147-49190193)
chr4 (28-70)||(6218282-6218324)
chr4 (24-66)||(11265936-11265978)
chr4 (20-70)||(16197721-16197771)
chr4 (22-79)||(27634271-27634328)
chr4 (24-64)||(22445526-22445566)
[»] chr3 (5 HSPs)
chr3 (24-77)||(35018549-35018602)
chr3 (23-65)||(48500668-48500710)
chr3 (25-65)||(35700077-35700117)
chr3 (28-64)||(45828097-45828133)
chr3 (28-64)||(54567970-54568006)
[»] chr6 (3 HSPs)
chr6 (21-65)||(19385611-19385655)
chr6 (28-65)||(13353279-13353316)
chr6 (28-65)||(33796404-33796441)
[»] chr1 (4 HSPs)
chr1 (23-79)||(4112730-4112786)
chr1 (28-64)||(4112976-4113012)
chr1 (21-51)||(39007191-39007221)
chr1 (20-58)||(41590502-41590540)
[»] scaffold0048 (1 HSPs)
scaffold0048 (28-66)||(81920-81958)
[»] chr8 (6 HSPs)
chr8 (28-70)||(36917403-36917445)
chr8 (28-65)||(8084205-8084242)
chr8 (28-65)||(11232163-11232200)
chr8 (28-65)||(11232398-11232435)
chr8 (24-65)||(42584744-42584785)
chr8 (28-64)||(10615472-10615508)
[»] scaffold0519 (1 HSPs)
scaffold0519 (28-65)||(1994-2031)
[»] scaffold0129 (1 HSPs)
scaffold0129 (28-65)||(14381-14418)
[»] chr7 (4 HSPs)
chr7 (28-65)||(1596671-1596708)
chr7 (28-65)||(21861372-21861409)
chr7 (28-65)||(25620214-25620251)
chr7 (28-65)||(33834269-33834306)
[»] scaffold0692 (1 HSPs)
scaffold0692 (28-64)||(5724-5760)


Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 17 - 347
Target Start/End: Original strand, 24199482 - 24199797
Alignment:
Q  17 attaacccaaattctaagatggtatcggagcctatccaagatccattggatcactcgctatcatgtctctcgttatcatgtctctcgttatcaagttcct 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               |||||||    
T  24199482 attaacccaaattctaagatggtatcggagcctatccaagatccattggatcactcgctatcatgtctctcgttatca---------------agttcct 24199566  T
Q  117 tagttcatgctttagtctttagatgtgtcctgcttgtgannnnnnntgtttagagtcccacattggataaaataagtctttggaaataagtatatatgtg 216  Q
    |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24199567 tagttcatgctttagtctttagatgtgtcctgcttgtgagggggggtgtttagagtcccacattggataaaataagtctttggaaataagtatatatgtg 24199666  T
Q  217 gggaagtattccttactttacttctcggctttatatggttgagttaaaccaaaccaaaattgagttatgtgtgtgaatcaacaaatatataccagatatt 316  Q
    | || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24199667 gagaggtattccttactttacttgtcggctttatatggttgagttaaaccaaaccaaaattgagttatgtgtgtgaatcaacaaatatataccagatatt 24199766  T
Q  317 ttgtnnnnnnntgttcacaataagtgctata 347  Q
    ||||       ||||||||||||||||||||    
T  24199767 ttgtaaaaaaatgttcacaataagtgctata 24199797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 2063740 - 2063698
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattggatcac 70  Q
    ||||||||||||||| |||||| | ||||||||||||||||||    
T  2063740 ttctaagatggtatcagagcctcttcaagatccattggatcac 2063698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 29434154 - 29434188
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccat 62  Q
    ||||||||||||||| |||||||||||||||||||    
T  29434154 ttctaagatggtatcagagcctatccaagatccat 29434188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 95507 - 95470
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  95507 ttctaagatggtatcagagcctctccaagatccattgg 95470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 27560703 - 27560666
Alignment:
Q  21 acccaaattctaagatggtatcggagcctatccaagat 58  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  27560703 acccgaattctaagatggtatcagagcctatccaagat 27560666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 11064506 - 11064444
Alignment:
Q  20 aacccaaattctaagatggtatcggagcctatccaagatccattggatcactcgctatcatgt 82  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| | ||||||||| |||||    
T  11064506 aacccaaattctaatatggtatcggagcctatccaagagccattgtaccactcgctaccatgt 11064444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 5137306 - 5137350
Alignment:
Q  20 aacccaaattctaagatggtatcggagcctatccaagatccattg 64  Q
    ||||||||||||||||||||||  |||| ||||||||||||||||    
T  5137306 aacccaaattctaagatggtattagagcttatccaagatccattg 5137350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 13982555 - 13982515
Alignment:
Q  25 aaattctaagatggtatcggagcctatccaagatccattgg 65  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  13982555 aaattcaaagatggtatcagagcctatccaagatccattgg 13982515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 2029847 - 2029884
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  2029847 ttctaagatggtatcagagcctctccaagatccattgg 2029884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 14466416 - 14466379
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  14466416 ttctaagatggtatcagagcctctccaagatccattgg 14466379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 16419345 - 16419382
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  16419345 ttctaagatggtatcagagcctctccaagatccattgg 16419382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 3185961 - 3186001
Alignment:
Q  21 acccaaattctaagatggtatcggagcctatccaagatcca 61  Q
    ||||||||| |||||||||||| |||||||||||| |||||    
T  3185961 acccaaattttaagatggtatcagagcctatccaaaatcca 3186001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 49190193 - 49190147
Alignment:
Q  20 aacccaaattctaagatggtatcggagcctatccaagatccattgga 66  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  49190193 aacccaaattctaagatggtatcagagcctatccaagatccgttgga 49190147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 6218282 - 6218324
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattggatcac 70  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  6218282 ttctaagatggtatcagagcctctccaagatccattggatcac 6218324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 11265936 - 11265978
Alignment:
Q  24 caaattctaagatggtatcggagcctatccaagatccattgga 66  Q
    |||||| |||||||||||| ||| |||||||||||||||||||    
T  11265936 caaattttaagatggtatctgagtctatccaagatccattgga 11265978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 16197771 - 16197721
Alignment:
Q  20 aacccaaattctaagatggtatcggagcctatccaagatccattggatcac 70  Q
    |||| |||||||||||||||||  | | |||||||||||||||||||||||    
T  16197771 aacctaaattctaagatggtattagtgtctatccaagatccattggatcac 16197721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 27634328 - 27634271
Alignment:
Q  22 cccaaattctaagatggtatcggagcctatccaagatccattggatcactcgctatca 79  Q
    ||||||||  || |||||||| |||||| |||||||||||||||| |||| |||||||    
T  27634328 cccaaattacaacatggtatcagagcctctccaagatccattggaccacttgctatca 27634271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 22445526 - 22445566
Alignment:
Q  24 caaattctaagatggtatcggagcctatccaagatccattg 64  Q
    ||||||||||||||||||| |||||| | ||||||||||||    
T  22445526 caaattctaagatggtatcagagcctcttcaagatccattg 22445566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 35018549 - 35018602
Alignment:
Q  24 caaattctaagatggtatcggagcctatccaagatccattggatcactcgctat 77  Q
    |||||||||||||| |||| ||||||||||||||||| |||| ||||| |||||    
T  35018549 caaattctaagatgatatcagagcctatccaagatccgttgggtcacttgctat 35018602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 48500668 - 48500710
Alignment:
Q  23 ccaaattctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||    
T  48500668 ccaaattgtaagatggtatgggagcctatccaagatacattgg 48500710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 35700117 - 35700077
Alignment:
Q  25 aaattctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||||||| || |||||| |||||||||||    
T  35700117 aaattctaagatggtatcgaagtctatccgagatccattgg 35700077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 45828097 - 45828133
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattg 64  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  45828097 ttctaagatggtatcagagcctctccaagatccattg 45828133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 54567970 - 54568006
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattg 64  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  54567970 ttctaagatggtatcagagcctctccaagatccattg 54568006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 19385611 - 19385655
Alignment:
Q  21 acccaaattctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||    
T  19385611 acccaaattctaagatggtatcaaagcctatccaagatctattgg 19385655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 13353279 - 13353316
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  13353279 ttctaagatggtatcagagcctctccaagatccattgg 13353316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 33796404 - 33796441
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  33796404 ttctaagatggtatcagagcctctccaagatccattgg 33796441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 4112786 - 4112730
Alignment:
Q  23 ccaaattctaagatggtatcggagcctatccaagatccattggatcactcgctatca 79  Q
    |||| ||||||||||||||| |||||| |||||||||||||||| |||  |||||||    
T  4112786 ccaatttctaagatggtatcagagcctctccaagatccattggaccacctgctatca 4112730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 4113012 - 4112976
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattg 64  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4113012 ttctaagatggtatcggagcctctccaagatccattg 4112976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 39007191 - 39007221
Alignment:
Q  21 acccaaattctaagatggtatcggagcctat 51  Q
    |||||||||||||||||||||||||||||||    
T  39007191 acccaaattctaagatggtatcggagcctat 39007221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 41590540 - 41590502
Alignment:
Q  20 aacccaaattctaagatggtatcggagcctatccaagat 58  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  41590540 aacccaaattctaagatggtatcagagcctatcctagat 41590502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 81920 - 81958
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattgga 66  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  81920 ttctaagatggtatcagagcctctccaagatccattgga 81958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 31; Significance: 0.00000003; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 36917445 - 36917403
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattggatcac 70  Q
    ||||||||||||||| |||||| |||||||||||||| |||||    
T  36917445 ttctaagatggtatcagagcctctccaagatccattgaatcac 36917403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 8084205 - 8084242
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  8084205 ttctaagatggtatcagagcctctccaagatccattgg 8084242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 11232200 - 11232163
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  11232200 ttctaagatggtatcagagcctctccaagatccattgg 11232163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 11232435 - 11232398
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  11232435 ttctaagatggtatcagagcctctccaagatccattgg 11232398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 42584744 - 42584785
Alignment:
Q  24 caaattctaagatggtatcggagcctatccaagatccattgg 65  Q
    |||||||||||| |||||| ||||||||||||||||| ||||    
T  42584744 caaattctaagacggtatcagagcctatccaagatccgttgg 42584785  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 10615472 - 10615508
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattg 64  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  10615472 ttctaagatggtatcagagcctctccaagatccattg 10615508  T

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Target: scaffold0519 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 1994 - 2031
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  1994 ttctaagatggtatcagagcctctccaagatccattgg 2031  T

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Target: scaffold0129 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 14381 - 14418
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  14381 ttctaagatggtatcagagcctctccaagatccattgg 14418  T

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Target: chr7 (Bit Score: 30; Significance: 0.0000001; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 1596671 - 1596708
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  1596671 ttctaagatggtatcagagcctctccaagatccattgg 1596708  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 21861372 - 21861409
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  21861372 ttctaagatggtatcagagcctctccaagatccattgg 21861409  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 25620214 - 25620251
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  25620214 ttctaagatggtatcagagcctctccaagatccattgg 25620251  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 33834269 - 33834306
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattgg 65  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  33834269 ttctaagatggtatcagagcctctccaagatccattgg 33834306  T

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Target: scaffold0692 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 5760 - 5724
Alignment:
Q  28 ttctaagatggtatcggagcctatccaagatccattg 64  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  5760 ttctaagatggtatcagagcctctccaagatccattg 5724  T

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