View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7850_low_46 (Length: 321)

Name: NF7850_low_46
Description: NF7850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7850_low_46
NF7850_low_46
[»] chr6 (32 HSPs)
chr6 (20-320)||(27272726-27273029)
chr6 (20-262)||(27629913-27630155)
chr6 (131-320)||(26918241-26918430)
chr6 (131-320)||(26999934-27000123)
chr6 (77-315)||(20160511-20160746)
chr6 (77-315)||(22172085-22172320)
chr6 (12-320)||(24304764-24305072)
chr6 (125-320)||(13299097-13299292)
chr6 (125-320)||(15424463-15424658)
chr6 (245-320)||(24863692-24863767)
chr6 (125-320)||(22935026-22935218)
chr6 (125-320)||(23857471-23857663)
chr6 (245-320)||(16749829-16749904)
chr6 (243-320)||(26988974-26989051)
chr6 (245-320)||(29572988-29573063)
chr6 (95-213)||(28162485-28162603)
chr6 (245-308)||(30558174-30558237)
chr6 (95-213)||(13522323-13522441)
chr6 (95-213)||(33374506-33374624)
chr6 (95-213)||(8892560-8892678)
chr6 (131-320)||(4525150-4525336)
chr6 (245-308)||(16944185-16944248)
chr6 (133-308)||(22477431-22477606)
chr6 (95-213)||(8903795-8903913)
chr6 (12-308)||(29549220-29549513)
chr6 (131-320)||(4757622-4757814)
chr6 (131-184)||(4772858-4772911)
chr6 (131-184)||(27360292-27360345)
chr6 (131-184)||(27450635-27450688)
chr6 (131-171)||(16673988-16674028)
chr6 (248-308)||(27360150-27360210)
chr6 (248-308)||(27450493-27450553)
[»] chr7 (28 HSPs)
chr7 (77-320)||(16503469-16503712)
chr7 (77-320)||(16518505-16518748)
chr7 (131-320)||(5127857-5128046)
chr7 (131-320)||(11424865-11425054)
chr7 (77-308)||(16041137-16041365)
chr7 (245-320)||(2154552-2154627)
chr7 (131-320)||(4145212-4145401)
chr7 (251-320)||(10916957-10917026)
chr7 (131-320)||(16736549-16736738)
chr7 (131-320)||(16751603-16751792)
chr7 (131-320)||(17523397-17523586)
chr7 (131-320)||(17529629-17529818)
chr7 (131-320)||(45387208-45387397)
chr7 (245-320)||(9618630-9618705)
chr7 (245-320)||(26275183-26275258)
chr7 (245-320)||(26319958-26320033)
chr7 (245-320)||(26670003-26670078)
chr7 (131-320)||(5147429-5147618)
chr7 (131-308)||(26435122-26435299)
chr7 (76-205)||(16450199-16450328)
chr7 (95-213)||(31088657-31088775)
chr7 (95-213)||(45733292-45733410)
chr7 (245-308)||(24592642-24592705)
chr7 (12-201)||(5159268-5159457)
chr7 (131-320)||(26537959-26538151)
chr7 (131-184)||(31564624-31564677)
chr7 (131-171)||(3445159-3445199)
chr7 (131-171)||(26485982-26486022)
[»] chr4 (23 HSPs)
chr4 (125-320)||(14664891-14665086)
chr4 (125-320)||(17013873-17014068)
chr4 (131-320)||(14763507-14763696)
chr4 (77-308)||(1900085-1900313)
chr4 (77-297)||(15227698-15227915)
chr4 (131-308)||(6569732-6569909)
chr4 (251-320)||(24592517-24592586)
chr4 (131-320)||(27163520-27163709)
chr4 (248-320)||(5005869-5005941)
chr4 (245-308)||(14098534-14098597)
chr4 (245-308)||(40105853-40105916)
chr4 (245-308)||(21969694-21969757)
chr4 (245-308)||(31126733-31126796)
chr4 (12-201)||(24112425-24112614)
chr4 (12-201)||(34189279-34189468)
chr4 (77-297)||(15285154-15285371)
chr4 (95-213)||(24460912-24461030)
chr4 (12-184)||(18800961-18801133)
chr4 (131-171)||(33674162-33674202)
chr4 (131-218)||(5005749-5005836)
chr4 (131-201)||(36344834-36344904)
chr4 (131-184)||(19373140-19373193)
chr4 (131-171)||(39850502-39850542)
[»] chr3 (52 HSPs)
chr3 (131-320)||(18277296-18277485)
chr3 (131-320)||(18292597-18292786)
chr3 (131-320)||(18307898-18308087)
chr3 (125-320)||(18051081-18051276)
chr3 (131-320)||(4796897-4797086)
chr3 (119-320)||(8301511-8301709)
chr3 (245-320)||(29148999-29149074)
chr3 (243-320)||(4721568-4721645)
chr3 (243-320)||(6192253-6192330)
chr3 (243-320)||(15741338-15741415)
chr3 (243-320)||(18330606-18330683)
chr3 (243-320)||(35880703-35880780)
chr3 (131-320)||(7073037-7073226)
chr3 (131-320)||(7996387-7996576)
chr3 (251-320)||(8295917-8295986)
chr3 (131-320)||(10642895-10643084)
chr3 (245-320)||(5609566-5609641)
chr3 (245-320)||(5713166-5713241)
chr3 (245-320)||(5724076-5724151)
chr3 (245-320)||(5757326-5757401)
chr3 (245-320)||(5768217-5768292)
chr3 (125-320)||(15892950-15893145)
chr3 (245-320)||(28339241-28339316)
chr3 (245-320)||(31964717-31964792)
chr3 (245-320)||(47023392-47023467)
chr3 (245-320)||(50134315-50134390)
chr3 (243-308)||(10396070-10396135)
chr3 (248-320)||(4416861-4416933)
chr3 (248-320)||(28116198-28116270)
chr3 (245-308)||(17985212-17985275)
chr3 (243-308)||(21674630-21674695)
chr3 (77-315)||(16626755-16626990)
chr3 (95-213)||(17994132-17994250)
chr3 (95-212)||(4625736-4625853)
chr3 (12-201)||(32438863-32439052)
chr3 (245-308)||(18225130-18225193)
chr3 (245-308)||(24328098-24328161)
chr3 (125-201)||(4893032-4893108)
chr3 (95-213)||(5652179-5652297)
chr3 (245-306)||(5013651-5013712)
chr3 (12-201)||(8211447-8211636)
chr3 (131-218)||(28116303-28116390)
chr3 (131-218)||(29665331-29665418)
chr3 (131-201)||(5466810-5466880)
chr3 (12-218)||(22871220-22871426)
chr3 (12-218)||(22886279-22886485)
chr3 (12-201)||(22387938-22388127)
chr3 (248-320)||(6542706-6542778)
chr3 (131-171)||(21674518-21674558)
chr3 (131-171)||(48465740-48465780)
chr3 (131-171)||(51781836-51781876)
chr3 (131-171)||(51796925-51796965)
[»] chr5 (44 HSPs)
chr5 (77-315)||(22888292-22888527)
chr5 (243-320)||(22999214-22999291)
chr5 (245-320)||(15658860-15658935)
chr5 (125-320)||(24688257-24688452)
chr5 (245-320)||(33777474-33777549)
chr5 (138-320)||(41674589-41674771)
chr5 (243-320)||(11549339-11549416)
chr5 (243-320)||(23718088-23718165)
chr5 (243-320)||(23752550-23752627)
chr5 (125-320)||(23892073-23892268)
chr5 (131-320)||(9548643-9548832)
chr5 (245-320)||(2511038-2511113)
chr5 (245-320)||(5637897-5637972)
chr5 (245-320)||(8665575-8665650)
chr5 (245-320)||(9317438-9317513)
chr5 (245-320)||(12132142-12132217)
chr5 (245-320)||(15758957-15759032)
chr5 (245-320)||(26480379-26480454)
chr5 (245-320)||(30152005-30152080)
chr5 (245-320)||(30168456-30168531)
chr5 (251-320)||(30934626-30934695)
chr5 (125-320)||(24969891-24970080)
chr5 (14-308)||(25198788-25199079)
chr5 (248-320)||(6874295-6874367)
chr5 (245-308)||(18375524-18375587)
chr5 (245-308)||(33516343-33516406)
chr5 (95-213)||(11325634-11325752)
chr5 (95-213)||(13184852-13184970)
chr5 (95-213)||(13440698-13440816)
chr5 (95-213)||(33877087-33877205)
chr5 (12-201)||(33292282-33292471)
chr5 (245-308)||(29967178-29967241)
chr5 (245-308)||(30029402-30029465)
chr5 (131-218)||(3789399-3789486)
chr5 (131-184)||(13325080-13325133)
chr5 (131-184)||(24681310-24681363)
chr5 (131-184)||(24723837-24723890)
chr5 (131-184)||(28649099-28649152)
chr5 (272-320)||(34616532-34616580)
chr5 (248-320)||(37671583-37671655)
chr5 (248-320)||(37754970-37755042)
chr5 (248-320)||(37771087-37771159)
chr5 (245-320)||(40473649-40473727)
chr5 (131-171)||(40473801-40473841)
[»] scaffold0089 (3 HSPs)
scaffold0089 (125-320)||(40272-40467)
scaffold0089 (243-320)||(47188-47265)
scaffold0089 (77-320)||(29573-29816)
[»] chr2 (36 HSPs)
chr2 (125-320)||(23128758-23128953)
chr2 (125-320)||(27434636-27434831)
chr2 (77-315)||(21703361-21703596)
chr2 (245-320)||(34286328-34286403)
chr2 (245-320)||(34291388-34291463)
chr2 (243-320)||(12655514-12655591)
chr2 (243-320)||(20837890-20837967)
chr2 (243-320)||(28882186-28882263)
chr2 (131-320)||(34279309-34279498)
chr2 (131-320)||(32049658-32049847)
chr2 (248-320)||(11635378-11635450)
chr2 (12-320)||(21677374-21677682)
chr2 (245-320)||(22926220-22926295)
chr2 (245-320)||(34861654-34861729)
chr2 (245-320)||(37686101-37686176)
chr2 (245-320)||(37701366-37701441)
chr2 (131-320)||(13936736-13936925)
chr2 (131-320)||(37925353-37925542)
chr2 (248-320)||(11641567-11641639)
chr2 (95-308)||(27118515-27118725)
chr2 (95-213)||(31891624-31891742)
chr2 (245-308)||(16829542-16829605)
chr2 (245-308)||(16891876-16891939)
chr2 (245-308)||(19416703-19416766)
chr2 (95-213)||(3784481-3784599)
chr2 (95-213)||(34156838-34156956)
chr2 (245-306)||(31876255-31876316)
chr2 (95-212)||(34303600-34303717)
chr2 (95-213)||(16163426-16163544)
chr2 (77-297)||(19456636-19456853)
chr2 (131-201)||(37375021-37375091)
chr2 (131-218)||(11635483-11635570)
chr2 (131-218)||(11641672-11641759)
chr2 (131-184)||(12716933-12716986)
chr2 (131-171)||(39052169-39052209)
chr2 (131-171)||(40233359-40233399)
[»] chr8 (19 HSPs)
chr8 (243-320)||(2137421-2137498)
chr8 (243-320)||(27609067-27609144)
chr8 (125-320)||(16277412-16277607)
chr8 (125-320)||(16283307-16283502)
chr8 (245-320)||(19688076-19688151)
chr8 (137-320)||(31489912-31490095)
chr8 (245-320)||(19208522-19208597)
chr8 (245-320)||(28362117-28362192)
chr8 (131-320)||(31354388-31354577)
chr8 (248-320)||(19674422-19674494)
chr8 (251-320)||(14557608-14557677)
chr8 (95-213)||(44562932-44563050)
chr8 (95-213)||(9354453-9354571)
chr8 (95-213)||(19659305-19659423)
chr8 (245-308)||(33258701-33258764)
chr8 (131-213)||(18710450-18710532)
chr8 (131-184)||(19518441-19518494)
chr8 (248-320)||(3329669-3329741)
chr8 (272-320)||(18710591-18710639)
[»] scaffold0143 (1 HSPs)
scaffold0143 (243-320)||(27268-27345)
[»] scaffold2173 (1 HSPs)
scaffold2173 (188-262)||(1-75)
[»] chr1 (6 HSPs)
chr1 (131-320)||(41793511-41793700)
chr1 (245-320)||(10962647-10962722)
chr1 (245-320)||(28584958-28585033)
chr1 (245-308)||(51638195-51638258)
chr1 (95-297)||(20340561-20340760)
chr1 (77-213)||(20460917-20461053)
[»] scaffold0350 (1 HSPs)
scaffold0350 (245-320)||(7442-7517)
[»] scaffold0159 (2 HSPs)
scaffold0159 (245-320)||(9269-9344)
scaffold0159 (245-320)||(19993-20068)
[»] scaffold0029 (1 HSPs)
scaffold0029 (131-320)||(332-522)
[»] scaffold0237 (1 HSPs)
scaffold0237 (245-308)||(15145-15208)
[»] scaffold0124 (2 HSPs)
scaffold0124 (125-308)||(30311-30493)
scaffold0124 (77-213)||(20222-20358)
[»] scaffold0144 (1 HSPs)
scaffold0144 (245-308)||(26417-26480)
[»] scaffold0260 (1 HSPs)
scaffold0260 (95-297)||(2884-3083)
[»] scaffold0336 (1 HSPs)
scaffold0336 (131-201)||(8096-8166)
[»] scaffold0099 (1 HSPs)
scaffold0099 (269-320)||(47019-47072)


Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 20 - 320
Target Start/End: Complemental strand, 27273029 - 27272726
Alignment:
Q  20 cacaagaagaaggaaacagaggttggaatggtatcctctggaacaggtcagcctacagctactgtcgcccctgttaatgctgctcagctacctccaccat 119  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27273029 cacaagaagaaggaaacagaggttggaatggtatcctctggagcaggtcagactacagctactgtcgcccctgttaatgctgctcagctacctccaccat 27272930  T
Q  120 actcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgt 219  Q
    ||||||||| |||||| ||||||||||| |||| ||||||||||||| || | |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  27272929 actcctatgtaccgtattctcaacatccattctacccgccattttactattagtatcctttgccatcaggaccacctcaagtacctgtgaatgctattgt 27272830  T
Q  220 gcagcagaagccacagcaaccatcagttcaacaacaac---aacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttg 316  Q
    ||||||||||||||| |||||| ||||||| |||||||   |||||||||||||||  ||||||||||||||||| ||||||||||| |||| |||||||    
T  27272829 gcagcagaagccacaacaaccaccagttcagcaacaacaacaacagaatcagcaagtcagacctactttccctccgataccgatgttatatgctgagttg 27272730  T
Q  317 cttc 320  Q
    ||||    
T  27272729 cttc 27272726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 20 - 262
Target Start/End: Complemental strand, 27630155 - 27629913
Alignment:
Q  20 cacaagaagaaggaaacagaggttggaatggtatcctctggaacaggtcagcctacagctactgtcgcccctgttaatgctgctcagctacctccaccat 119  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  27630155 cacaagaagaaggaaacagaggttggaatggtatcctcgggagcaggtcagtctacggctactgtcgcccctgttaatgttgctcagctacctccaccat 27630056  T
Q  120 actcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgt 219  Q
    || ||| | |||| || ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27630055 acccctgtacaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgt 27629956  T
Q  220 gcagcagaagccacagcaaccatcagttcaacaacaacaacag 262  Q
    ||| ||||||||||| |||||| ||||||| ||||||||||||    
T  27629955 gcaacagaagccacaacaaccaccagttcagcaacaacaacag 27629913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 131 - 320
Target Start/End: Original strand, 26918241 - 26918430
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  || |||| |     
T  26918241 ccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattgctcaacagacga 26918340  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  26918341 aacaacagttgccggttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 26918430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 131 - 320
Target Start/End: Original strand, 26999934 - 27000123
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  || |||| |     
T  26999934 ccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaattgctcaacagatga 27000033  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  27000034 aacaacagttgccggttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 27000123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 315
Target Start/End: Original strand, 20160511 - 20160746
Alignment:
Q  77 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatc 176  Q
    |||||||| ||||||||||||||| ||||  ||||||||||||||   | |||||  |||||||||||||| ||||  || |||||||||||||| ||||    
T  20160511 gctactgttgcccctgttaatgctactcaattacctccaccatacctgtttgcacattactctcaacatcctttctatccaccattttaccatcagtatc 20160610  T
Q  177 ctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctag 276  Q
    || | ||| | || | ||||||||||||||| ||||| ||||  ||||| || |  || || ||| ||| ||||||||||||||||   || ||| ||||    
T  20160611 ctctaccaccgggtcaacctcaggtacccgttaatgccattgctcagcaaaaacagcaacagccaccagctcaacaacaacaacag---caacaaactag 20160707  T
Q  277 acctactttccctccaataccgatgttgtatgttgagtt 315  Q
    |||||| || ||||| ||||||||||| |||| ||||||    
T  20160708 acctacctttcctccgataccgatgttatatgctgagtt 20160746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 315
Target Start/End: Complemental strand, 22172320 - 22172085
Alignment:
Q  77 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatc 176  Q
    |||||||| ||||||||||||||| ||||  ||||||||||||||   | |||||  |||||||||||||| ||||  || |||||||||||||| ||||    
T  22172320 gctactgttgcccctgttaatgctactcaattacctccaccatacctgtttgcacattactctcaacatcctttctatccaccattttaccatcagtatc 22172221  T
Q  177 ctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctag 276  Q
    || | ||| | || | ||||||||||||||| ||||| ||||  ||||| || |  || || ||| ||| ||||||||||||||||   || ||| ||||    
T  22172220 ctctaccaccgggtcaacctcaggtacccgttaatgccattgctcagcaaaaacagcaacagccaccagctcaacaacaacaacag---caacaaactag 22172124  T
Q  277 acctactttccctccaataccgatgttgtatgttgagtt 315  Q
    |||||| || ||||| ||||||||||| |||| ||||||    
T  22172123 acctacctttcctccgataccgatgttatatgctgagtt 22172085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 320
Target Start/End: Complemental strand, 24305072 - 24304764
Alignment:
Q  12 atggacatcacaagaagaaggaaacagaggttggaatggtatcctctggaacaggtcagcctacagctactgtcgcccctgttaatgctgctcagctacc 111  Q
    ||||||| ||||||||||| ||||| || || || ||||| ||  ||||| | |||||  | |  ||||||||||| ||| | |||||||| ||  | ||    
T  24305072 atggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgtcgctcctatcaatgctgcccaaatgcc 24304973  T
Q  112 tccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaat 211  Q
    |||  ||||| | ||||  ||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| |||    
T  24304972 tccgtcatacccatatgtgccgtattctcagcatcccttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaat 24304873  T
Q  212 gctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttg 311  Q
    || || |  || |||| |  ||| ||     ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| ||    
T  24304872 gcaatcgctcaacagatgaaacaacagtttccagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctg 24304773  T
Q  312 agttgcttc 320  Q
    |||||||||    
T  24304772 agttgcttc 24304764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 125 - 320
Target Start/End: Complemental strand, 13299292 - 13299097
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||| ||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || |  || |    
T  13299292 tatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaac 13299193  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||| |  ||| ||     ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  13299192 agatgaaacaacagttgccagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 13299097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 125 - 320
Target Start/End: Complemental strand, 15424658 - 15424463
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||| ||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || |  || |    
T  15424658 tatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaac 15424559  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||| |  ||| ||     ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  15424558 agatgaaacaacagttgccagttgaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 15424463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 24863692 - 24863767
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  24863692 gttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 24863767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 125 - 320
Target Start/End: Complemental strand, 22935218 - 22935026
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||| ||||| ||||||||||| ||||| |||||||| || ||||| ||||| |||||| | || | ||||||||||||||| ||||| ||||  || |    
T  22935218 tatgcgccgtattctcaacatcccttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgtcaatgcaattgctcaac 22935119  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||| |  ||| ||     | |||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  22935118 agatgaaacaacagttgccggttcaacaacaacaa---aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 22935026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 125 - 320
Target Start/End: Complemental strand, 23857663 - 23857471
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||| ||||| ||||||||||| ||||| |||||||| || ||||| ||||| |||||| | || | ||||||||||||||| ||||| ||||  || |    
T  23857663 tatgcgccgtattctcaacatcccttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgtcaatgcaattgctcaac 23857564  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||| |  ||| ||     | |||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  23857563 agatgaaacaacagttgccggttcaacaacaacaa---aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 23857471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 16749829 - 16749904
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  16749829 gttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 16749904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 26988974 - 26989051
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  26988974 cagttcaacaacatcaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 26989051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 29572988 - 29573063
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| |||||||||| |||||||||||    
T  29572988 gttcaacaacaacaacaaaatcagcaagctagaccaacttttcctcctataccaatgttgtatgctgagttgcttc 29573063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 28162485 - 28162603
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||| | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| |||| ||    
T  28162485 aatgctgctcagctacctccatcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggacaac 28162584  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  28162585 ctcaggtacccgttaatgc 28162603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 30558237 - 30558174
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| |||||||||||||| |||||||| ||||| ||||| ||||||||||    
T  30558237 gttcaacaacaacaacaaaatcagcaagctaggcctacttttcctcctataccaatgttgtatg 30558174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 13522441 - 13522323
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  13522441 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 13522342  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  13522341 ctcaggtacccgttaatgc 13522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 33374624 - 33374506
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  33374624 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 33374525  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  33374524 ctcaggtacccgttaatgc 33374506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 8892678 - 8892560
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| ||| |||||||||| || | ||    
T  8892678 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattatatcatcagtattctttgccatcgggtcaac 8892579  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  8892578 ctcaggtacccgttaatgc 8892560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 320
Target Start/End: Original strand, 4525150 - 4525336
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| |||||||||||||| || ||||| ||||| |||||||||||| |||| | ||||||||| || || ||||| || |  || |||   |    
T  4525150 ccgtattctcagcatccgttcttcccaccgttttatcatcagtatcctttgccaccaggccaacctcaggttcctgtcaatgccatcgctcaacaggtac 4525249  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| |||||  |||||||||| || || |||   ||| |  ||||||| ||||| ||||| ||||| |||||||||| |||||||||||    
T  4525250 aacatcaaccgccagttcaacagcagcagcag---cagtatactagaccaacttttcctcctataccaatgttgtatgctgagttgcttc 4525336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 16944248 - 16944185
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    |||||||| |||||||| ||||||||||| || || || |||||||| ||||||||||||||||    
T  16944248 gttcaacagcaacaacaaaatcagcaagccaggccaaccttccctcctataccgatgttgtatg 16944185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 308
Target Start/End: Complemental strand, 22477606 - 22477431
Alignment:
Q  133 gtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagcca 232  Q
    ||||||||| ||||| ||||| || ||||| || ||| | |||||||||||||| || | ||||||||||||||| ||||| ||||  || || | || |    
T  22477606 gtactctcagcatcccttctttccaccattctatcattagtatcctttgccatcgggtcaacctcaggtacccgttaatgcaattgctcaacaaatgcaa 22477507  T
Q  233 cagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    || ||  || | ||||||||||||| |||  | || |||||||||||||| || ||||  ||||| ||| ||||||    
T  22477506 caacagtcaccggttcaacaacaacgacaacagcaacaagctagacctacctttcctctgataccaatgatgtatg 22477431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 8903913 - 8903795
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||  ||||| || ||||| || ||||| ||| |||||||||| || | ||    
T  8903913 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatctcttctttccaccattctatcatcagtattctttgccatcgggtcaac 8903814  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  8903813 ctcaggtacccgttaatgc 8903795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 308
Target Start/End: Original strand, 29549220 - 29549513
Alignment:
Q  12 atggacatcacaagaagaaggaaacagaggttggaatggtatcctctggaacaggtcagcctacagctactgtcgcccctgttaatgctgctcagctacc 111  Q
    ||||||||||||||||||| ||||| || || || ||||| ||  ||||| | |||||  |||  ||||| || || ||| | ||||| |||||  | ||    
T  29549220 atggacatcacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcctatcaatgcagctcaaatgcc 29549319  T
Q  112 tccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaat 211  Q
    |||  ||||| | ||||  ||||||||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | ||||||||| || || |||    
T  29549320 tccgtcatacccatatgtgccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcctgtcaat 29549419  T
Q  212 gctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    || || |  || |||  || ||| |||||  ||||||||||||| || |||   ||  | |||||||| ||||| ||||| ||||| ||||||||||    
T  29549420 gccatcgctcaacaggtgcaacatcaaccgccagttcaacaacagcagcag---caatacgctagaccaacttttcctcctataccaatgttgtatg 29549513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 320
Target Start/End: Original strand, 4757622 - 4757814
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| |||||||||||||||||||| || ||||| ||||| || ||||||||| | || |  ||||| || ||||| ||||| ||||  || |||| |     
T  4757622 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccagcctcaagtgcccgtcaatgcaattgcccaacagatga 4757721  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagc---aagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | |||||||||||||||||| | ||||   |  ||||||| ||||| ||||| ||||| |||||||||| |||||||||||    
T  4757722 aacaacagttgccggttcaacaacaacaacagcagcagcagtatactagaccaacttttcctcctataccaatgttgtatgctgagttgcttc 4757814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 4772858 - 4772911
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgcca 184  Q
    ||||| |||||||||||||||||||| || ||||| ||||| || |||||||||    
T  4772858 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 4772911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 27360345 - 27360292
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgcca 184  Q
    ||||| |||||||||||||||||||| || ||||| ||||| || |||||||||    
T  27360345 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 27360292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 27450688 - 27450635
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgcca 184  Q
    ||||| |||||||||||||||||||| || ||||| ||||| || |||||||||    
T  27450688 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 27450635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 16673988 - 16674028
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatca 171  Q
    ||||||||||| |||||||||||||| || |||||||||||    
T  16673988 ccgtactctcagcatccgttcttcccaccgttttaccatca 16674028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 308
Target Start/End: Complemental strand, 27360210 - 27360150
Alignment:
Q  248 caacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||| | ||| |  ||||||| ||||| ||||| ||||||||||||||||    
T  27360210 caacaacaacaacagcagcagtatactagaccaacttttcctcctataccgatgttgtatg 27360150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 308
Target Start/End: Complemental strand, 27450553 - 27450493
Alignment:
Q  248 caacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||| | ||| |  ||||||| ||||| ||||| ||||||||||||||||    
T  27450553 caacaacaacaacagcagcagtatactagaccaacttttcctcctataccgatgttgtatg 27450493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 7e-40; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 77 - 320
Target Start/End: Complemental strand, 16503712 - 16503469
Alignment:
Q  77 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatc 176  Q
    |||||||| || ||| |||||||||| ||  | |||||  ||||| | ||||| ||||||||||| ||||| ||||| |||||||| || ||||| ||||    
T  16503712 gctactgttgctcctattaatgctgcccaaatgcctccgtcatacccatatgcgccgtactctcagcatcctttctttccgccattctatcatcagtatc 16503613  T
Q  177 ctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctag 276  Q
    | |||||| | || | ||||||||||||||| ||||| ||||  || |||| |  ||| || |   | ||||||||||||||||| ||||||||||||||    
T  16503612 ccttgccaccgggtcaacctcaggtacccgttaatgcaattgctcaacagatgaaacaacagctgccggttcaacaacaacaacaaaatcagcaagctag 16503513  T
Q  277 acctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  16503512 acctactttccctccgataccgatgttgtatgctgagttgcttc 16503469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 77 - 320
Target Start/End: Complemental strand, 16518748 - 16518505
Alignment:
Q  77 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatc 176  Q
    |||||||| || ||| |||||||||| ||  | |||||  ||||| | ||||| ||||||||||| ||||| ||||| |||||||| || ||||| ||||    
T  16518748 gctactgttgctcctattaatgctgcccaaatgcctccgtcatacccatatgcgccgtactctcagcatcctttctttccgccattctatcatcagtatc 16518649  T
Q  177 ctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctag 276  Q
    | |||||| | || | ||||||||||||||| ||||| ||||  || |||| |  ||| || |   | ||||||||||||||||| ||||||||||||||    
T  16518648 ccttgccaccgggtcaacctcaggtacccgttaatgcaattgctcaacagatgaaacaacagctgccggttcaacaacaacaacaaaatcagcaagctag 16518549  T
Q  277 acctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  16518548 acctactttccctccgataccgatgttgtatgctgagttgcttc 16518505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 131 - 320
Target Start/End: Original strand, 5127857 - 5128046
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||| ||||||||||| ||||| |||||| ||||| | || | |||||| |||||||| ||||| ||||  || |||| |     
T  5127857 ccgtattctcagcatcctttctttccgccattttatcatcagtatcctctgccaccgggtcaacctcaagtacccgttaatgcaattgctcaacagatga 5127956  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  5127957 aacaacagttgccggttcaacaacaacaacaaaatcagcaagctagacctacttttcctccgataccgatgttgtatgctgagttgcttc 5128046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 11425054 - 11424865
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||| || ||| ||||| | || | |||||| |||||||| ||||| || |  || |||| |     
T  11425054 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaacagatga 11424955  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  11424954 aacaacagttgccagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 11424865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 77 - 308
Target Start/End: Original strand, 16041137 - 16041365
Alignment:
Q  77 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatc 176  Q
    |||||||| |||||| |||||||||| ||| |||||||  | ||| | ||||| || |||||||| ||||| ||||| || ||||| || ||||| ||||    
T  16041137 gctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagtatc 16041236  T
Q  177 ctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctag 276  Q
    ||||| |||| || | ||||||||||||||| ||| |  | || ||||| | || ||| || ||| |||||   |||||||||||| |||| ||||||||    
T  16041237 ctttgtcatcgggtcaacctcaggtacccgttaattccgtcgttcagcaaatgcaacaacagccaccagtt---caacaacaacagcatcaacaagctag 16041333  T
Q  277 acctactttccctccaataccgatgttgtatg 308  Q
    |||||| |||||||| ||||| ||||||||||    
T  16041334 acctaccttccctccgataccaatgttgtatg 16041365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 2154552 - 2154627
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||    
T  2154552 gttcaacaacaacaacaaaatcagcaagctagacatactttccctccgataccgatgttgtatgctgagttgcttc 2154627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 4145401 - 4145212
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | ||||||||| || || ||||| || |  || |||   |    
T  4145401 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcctgtcaatgccatcgctcaacaggtac 4145302  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||||   | ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  4145301 aacatcaactgccggttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 4145212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 251 - 320
Target Start/End: Complemental strand, 10917026 - 10916957
Alignment:
Q  251 caacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  10917026 caacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 10916957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 16736738 - 16736549
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||| ||||||||||| |||||||| ||| ||||| | || | |||||| || ||||| ||||| ||||  || |||| |     
T  16736738 ccgtattctcagcatcctttctttccgccattttatcatcaataccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacagatga 16736639  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  16736638 aacaacagatgccggttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 16736549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 16751792 - 16751603
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||| ||||||||||| |||||||| ||| ||||| | || | |||||| || ||||| ||||| ||||  || |||| |     
T  16751792 ccgtattctcagcatcctttctttccgccattttatcatcaataccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacagatga 16751693  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  16751692 aacaacagatgccggttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 16751603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 320
Target Start/End: Original strand, 17523397 - 17523586
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||| ||||||||||| |||||||| ||| ||||| | || | |||||| || ||||| ||||| ||||  || |||| |     
T  17523397 ccgtattctcagcatcctttctttccgccattttatcatcaataccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacagatga 17523496  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  17523497 aacaacagatgccggttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 17523586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 17529818 - 17529629
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||| ||||||||||| |||||||| ||| ||||| | || | |||||| || ||||| ||||| ||||  || |||| |     
T  17529818 ccgtattctcagcatcctttctttccgccattttatcatcaataccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacagatga 17529719  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  17529718 aacaacagatgccggttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 17529629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 320
Target Start/End: Original strand, 45387208 - 45387397
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||  || |||| |     
T  45387208 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacagatga 45387307  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  45387308 aacaacagatgccggttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 45387397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 9618630 - 9618705
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  9618630 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 9618705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 26275258 - 26275183
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  26275258 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 26275183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 26320033 - 26319958
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  26320033 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 26319958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 26670078 - 26670003
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  26670078 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 26670003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 5147618 - 5147429
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||||||||| |||||||||||||| || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  || |||| |     
T  5147618 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattgcccaacagatga 5147519  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     |  |||||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||| |||| |||||||||||    
T  5147518 aacaacagatgccgattcaacaacaacaacaaaatcaacaagctagacctacttttcctccgataccgatgttatatgctgagttgcttc 5147429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 131 - 308
Target Start/End: Original strand, 26435122 - 26435299
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||||||||| |||||||||||||| || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  || |||| |     
T  26435122 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattgcccaacagatga 26435221  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
     ||| ||     ||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| ||||||||||    
T  26435222 aacaacagatgccagttcaacaacaacaacaaaatcagcaagctagaccaacttttcctcctataccaatgttgtatg 26435299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 205
Target Start/End: Complemental strand, 16450328 - 16450199
Alignment:
Q  76 agctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatat 175  Q
    ||||||||| |||||| |||||||||| ||| |||||||  | ||| | || || | ||||||||| ||||| ||||| || |||||||| ||||| |||    
T  16450328 agctactgttgcccctattaatgctgcccagttacctccgtcgtacccgtacgcgcagtactctcagcatcccttctttccaccattttatcatcagtat 16450229  T
Q  176 cctttgccatcaggaccacctcaggtaccc 205  Q
    ||||||||||| || | |||||||||||||    
T  16450228 cctttgccatcgggtcaacctcaggtaccc 16450199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 31088775 - 31088657
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  31088775 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 31088676  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  31088675 ctcaggtacccgttaatgc 31088657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 45733292 - 45733410
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  45733292 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 45733391  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  45733392 ctcaggtacccgttaatgc 45733410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 24592705 - 24592642
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| ||||||||||| || || || |||||||| ||||||||||||||||    
T  24592705 gttcaacaacaacaacaaaatcagcaagccaggccaaccttccctcctataccgatgttgtatg 24592642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 5159268 - 5159457
Alignment:
Q  12 atggacatcacaagaagaaggaaacagaggttggaatggtatcctctggaacaggtcagcctacagctactgtcgcccctgttaatgctgctcagctacc 111  Q
    ||||||||||||||||||| || || ||||| |||||| || || |||||||   ||   | |  |||||||| || ||| | |||||||||||| | ||    
T  5159268 atggacatcacaagaagaaagatacggaggtgggaatgatagccgctggaactaatccatccatggctactgttgctcctatcaatgctgctcagtttcc 5159367  T
Q  112 tccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggt 201  Q
     ||  | ||| | ||||||||||||||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | |||||||||    
T  5159368 cccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 5159457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 26538151 - 26537959
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||||||||| |||||||||||||| || ||||||||||| || ||  ||||| | || | |||||| || ||||| ||||| ||||  || |||| |     
T  26538151 ccgtactctcagcatccgttcttcccaccgttttaccatcagtaccccctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacagatga 26538052  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaa---gctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | |||||||||||||||||| | ||||||    | ||||| ||||| ||||| ||||||||||| |||| |||||||||||    
T  26538051 aacaacagttgccggttcaacaacaacaacagcagcagcaatataccagaccaacttttcctcctataccgatgttatatgctgagttgcttc 26537959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 31564677 - 31564624
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgcca 184  Q
    ||||| |||||||||||||||||||| || ||||| ||||| || |||||||||    
T  31564677 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 31564624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 3445159 - 3445199
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatca 171  Q
    ||||||||||| |||||||||||||| || |||||||||||    
T  3445159 ccgtactctcagcatccgttcttcccaccgttttaccatca 3445199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 26486022 - 26485982
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatca 171  Q
    ||||||||||| |||||||||||||| || |||||||||||    
T  26486022 ccgtactctcagcatccgttcttcccaccgttttaccatca 26485982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 125 - 320
Target Start/End: Original strand, 14664891 - 14665086
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||||||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || |  || |    
T  14664891 tatgcaccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaac 14664990  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||| |  ||| ||     ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  14664991 agatgaaacaacagttgccagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 14665086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 125 - 320
Target Start/End: Original strand, 17013873 - 17014068
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||| ||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  || |    
T  17013873 tatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaattgctcaac 17013972  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||| |  ||| ||     ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  17013973 agatgaaacaacagttgccagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 17014068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 14763696 - 14763507
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||||||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | ||||||||| || || ||||| || |  || |||  ||    
T  14763696 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcctgtcaatgccatcgctcaacaggtgc 14763597  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||||   | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  14763596 aacatcaactgccggttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 14763507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 77 - 308
Target Start/End: Original strand, 1900085 - 1900313
Alignment:
Q  77 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatc 176  Q
    |||||||| |||||| |||||||||| ||| |||||||  | ||| | ||||| || |||||||| ||||| ||||| || ||||| || ||||| ||||    
T  1900085 gctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagtatc 1900184  T
Q  177 ctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctag 276  Q
    |||||||||| || | ||||||||||||||| |||||  | || ||||| | || ||| || ||| |||||||||| |||||||   |||| ||||||||    
T  1900185 ctttgccatcgggtcaacctcaggtacccgttaatgccgtcgttcagcaaatgcaacaacagccaccagttcaacagcaacaac---atcaacaagctag 1900281  T
Q  277 acctactttccctccaataccgatgttgtatg 308  Q
    |||||| || ||||| ||||| ||| ||||||    
T  1900282 acctacctttcctccgataccaatgctgtatg 1900313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 77 - 297
Target Start/End: Original strand, 15227698 - 15227915
Alignment:
Q  77 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatc 176  Q
    |||||||| |||||| |||||||||| ||| |||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||||||||    
T  15227698 gctactgttgcccctattaatgctgcccagttacctccgtcgtacccgtatgcgcaatactctcagcatcccttctttccaccattctatcatcaatatc 15227797  T
Q  177 ctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctag 276  Q
    |||||||||| || | ||||||||||||||| |||||| | || ||||| | || ||| || ||| ||| |||||||||||| |||   || ||||||||    
T  15227798 ctttgccatcgggtcaacctcaggtacccgttaatgctgtcgttcagcaaatgcaacaacagccaccagctcaacaacaacagcag---caacaagctag 15227894  T
Q  277 acctactttccctccaatacc 297  Q
    |||||| || ||||| |||||    
T  15227895 acctacctttcctccgatacc 15227915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 308
Target Start/End: Original strand, 6569732 - 6569909
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  || |||| |     
T  6569732 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaattgcccaacagatga 6569831  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
     ||| ||     |||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  6569832 aacaacagatgccagttcaacagcaacaacaaaatcagcaagctagacctactttccctccgataccaatgttgtatg 6569909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 251 - 320
Target Start/End: Complemental strand, 24592586 - 24592517
Alignment:
Q  251 caacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  24592586 caacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 24592517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 27163709 - 27163520
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||  || |||| |     
T  27163709 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgctcaacagatga 27163610  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  27163609 aacaacagatgccggttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 27163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 5005869 - 5005941
Alignment:
Q  248 caacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  5005869 caacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 5005941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 14098534 - 14098597
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  14098534 gttcaacaacaacaacaaaatcagcaagctagacctacttttcctcctataccaatgttgtatg 14098597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 40105916 - 40105853
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||    
T  40105916 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatg 40105853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 21969694 - 21969757
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| |||||||||||||| |||||||| ||||| ||||| ||||||||||    
T  21969694 gttcaacaacaacaacaaaatcagcaagctaggcctacttttcctcctataccaatgttgtatg 21969757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 31126796 - 31126733
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| |||||||||||||| |||||||| ||||| ||||| ||||||||||    
T  31126796 gttcaacaacaacaacaaaatcagcaagctaggcctacttttcctcctataccaatgttgtatg 31126733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 24112425 - 24112614
Alignment:
Q  12 atggacatcacaagaagaaggaaacagaggttggaatggtatcctctggaacaggtcagcctacagctactgtcgcccctgttaatgctgctcagctacc 111  Q
    ||||||||||||||||||| || || ||||| |||||| || || |||||||   ||   | |  |||||||| || ||||| |||||||||||| | ||    
T  24112425 atggacatcacaagaagaaagatacggaggtgggaatgatagccgctggaactaatccatccaaggctactgttgctcctgtcaatgctgctcagtttcc 24112524  T
Q  112 tccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggt 201  Q
     ||  | ||| | ||||||||||||||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | |||||||||    
T  24112525 cccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 24112614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 201
Target Start/End: Complemental strand, 34189468 - 34189279
Alignment:
Q  12 atggacatcacaagaagaaggaaacagaggttggaatggtatcctctggaacaggtcagcctacagctactgtcgcccctgttaatgctgctcagctacc 111  Q
    ||||||||||||||||||| || || ||||| |||||| || || |||||||   ||   | |  ||||||||||| ||| | |||||||||||| | ||    
T  34189468 atggacatcacaagaagaaagatacggaggtgggaatgatagccgctggaactaatccatccaaggctactgtcgctcctatcaatgctgctcagtttcc 34189369  T
Q  112 tccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggt 201  Q
     ||  | ||| | ||||||||||||||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | |||||||||    
T  34189368 cccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 34189279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 297
Target Start/End: Complemental strand, 15285371 - 15285154
Alignment:
Q  77 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatc 176  Q
    |||||||| |||||| |||||||||| ||| ||||||||   ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| ||||    
T  15285371 gctactgttgcccctattaatgctgcccagttacctccattgtacccatatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatc 15285272  T
Q  177 ctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctag 276  Q
    || | ||||| || | ||||||||| ||||| ||||| || || ||||| | || ||| || ||| ||  |||||||||||| |||   || ||||||||    
T  15285271 ctctaccatcgggtcaacctcaggtgcccgttaatgccatcgttcagcaaatgcaacaacagccaccaactcaacaacaacagcag---caacaagctag 15285175  T
Q  277 acctactttccctccaatacc 297  Q
    |||||| || ||||| |||||    
T  15285174 acctacctttcctccgatacc 15285154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 24461030 - 24460912
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| ||| |||||||||| || | ||    
T  24461030 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtattctttgccatcgggtcaac 24460931  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  24460930 ctcaggtacccgttaatgc 24460912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 184
Target Start/End: Complemental strand, 18801133 - 18800961
Alignment:
Q  12 atggacatcacaagaagaaggaaacagaggttggaatggtatcctctggaacaggtcagcctacagctactgtcgcccctgttaatgctgctcagctacc 111  Q
    ||||||| ||||||||||| |||||||| || || ||||| ||  ||||| | |||||  |||  |||||||| || ||| | ||||| |||||  | ||    
T  18801133 atggacaccacaagaagaaagaaacagaagtggggatggtgtcagctggagccggtcaagctatggctactgttgcacctatcaatgcagctcaaatgcc 18801034  T
Q  112 tccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgcca 184  Q
    |||  ||||| | |||   ||||| ||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  18801033 tccgtcatacccatatatgccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcca 18800961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 33674202 - 33674162
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatca 171  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  33674202 ccgtactctcagcatccgttcttcccaccattttaccatca 33674162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 5005749 - 5005836
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 218  Q
    ||||| ||||| ||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  5005749 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 5005836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 36344904 - 36344834
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggt 201  Q
    ||||||||||| |||||||||||||  || ||||| ||||| |||||||||||| | || | |||||||||    
T  36344904 ccgtactctcagcatccgttcttcctaccgttttatcatcagtatcctttgccaccgggccaacctcaggt 36344834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 19373140 - 19373193
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgcca 184  Q
    ||||||||||| |||||||||||||| || ||||| ||||| || |||||||||    
T  19373140 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 19373193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 39850502 - 39850542
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatca 171  Q
    ||||||||||| |||||||||||||| || |||||||||||    
T  39850502 ccgtactctcagcatccgttcttcccaccgttttaccatca 39850542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 18277485 - 18277296
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||||||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | ||||||||| || || ||||| || |  || |||  ||    
T  18277485 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcctgtcaatgccatcgctcaacaggtgc 18277386  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||||   | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  18277385 aacatcaactgccggttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 18277296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 18292786 - 18292597
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||||||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | ||||||||| || || ||||| || |  || |||  ||    
T  18292786 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcctgtcaatgccatcgctcaacaggtgc 18292687  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||||   | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  18292686 aacatcaactgccggttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 18292597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 18308087 - 18307898
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||||||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | ||||||||| || || ||||| || |  || |||  ||    
T  18308087 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcctgtcaatgccatcgctcaacaggtgc 18307988  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||||   | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  18307987 aacatcaactgccggttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 18307898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 320
Target Start/End: Original strand, 18051081 - 18051276
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||| ||||| ||||||||||| ||||| |||||||| || ||||| || ||| ||||| | || | |||||| |||||||| ||||| || |  || |    
T  18051081 tatgcgccgtattctcaacatcctttctttccgccattctatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaac 18051180  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||| |  ||| ||     ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  18051181 agatgaaacaacagttgccagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 18051276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 4797086 - 4796897
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  || |||| |     
T  4797086 ccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaattgctcaacagatga 4796987  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  4796986 aacaacagttgccggttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 4796897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 119 - 320
Target Start/End: Complemental strand, 8301709 - 8301511
Alignment:
Q  119 tactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 218  Q
    ||||| ||||| ||||| ||||| ||||| ||||| |||||||| || ||||| || ||||||||| | || | |||||| |||||||| ||||| ||||    
T  8301709 tactcatatgcgccgtattctcagcatcctttctttccgccattctatcatcagtaccctttgccaccgggtcaacctcaagtacccgttaatgcaattg 8301610  T
Q  219 tgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgct 318  Q
      || |||| |  ||| ||     |||||||||||||||||   ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  8301609 ctcaacagatgaaacaacagttgccagttcaacaacaacaa---aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgct 8301513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 29149074 - 29148999
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  29149074 gttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 29148999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 4721568 - 4721645
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  4721568 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 4721645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 6192253 - 6192330
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  6192253 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 6192330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 15741415 - 15741338
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  15741415 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 15741338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 18330606 - 18330683
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  18330606 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 18330683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 35880703 - 35880780
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  35880703 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 35880780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 320
Target Start/End: Original strand, 7073037 - 7073226
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||  || |||| |     
T  7073037 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgctcaacagatga 7073136  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| |||| |||||||||||    
T  7073137 aacaacagttgccggttcaacaacaacaacaaaatcagcaagctagacctacttttcctccgataccgatgttatatgctgagttgcttc 7073226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 320
Target Start/End: Original strand, 7996387 - 7996576
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||  || |||| |     
T  7996387 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgctcaacagatga 7996486  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  7996487 aacaacagatgccggttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 7996576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 8295917 - 8295986
Alignment:
Q  251 caacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  8295917 caacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 8295986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 320
Target Start/End: Original strand, 10642895 - 10643084
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||  || |||| |     
T  10642895 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgctcaacagatga 10642994  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  10642995 aacaacagatgccggttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 10643084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 5609641 - 5609566
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  5609641 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 5609566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 5713166 - 5713241
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||| |||||||||||    
T  5713166 gttcaacaacaacaacaaaatcagcaagccagacctactttccctccgataccgatgttatatgctgagttgcttc 5713241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 5724076 - 5724151
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||| |||||||||||    
T  5724076 gttcaacaacaacaacaaaatcagcaagccagacctactttccctccgataccgatgttatatgctgagttgcttc 5724151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 5757401 - 5757326
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||| |||||||||||    
T  5757401 gttcaacaacaacaacaaaatcagcaagccagacctactttccctccgataccgatgttatatgctgagttgcttc 5757326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 5768292 - 5768217
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||| |||||||||||    
T  5768292 gttcaacaacaacaacaaaatcagcaagccagacctactttccctccgataccgatgttatatgctgagttgcttc 5768217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 320
Target Start/End: Complemental strand, 15893145 - 15892950
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||| ||||||||||| ||||| ||||| ||||| || || ||||| || ||||||||| | || | |||||| |||||||| ||||| ||||  || |    
T  15893145 tatgcgccgtactctcagcatcctttctttccgcccttctatcatcagtaccctttgccaccgggtcaacctcaagtacccgttaatgcaattgctcaac 15893046  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||| |  ||| ||     | |||||||||||||||||  |||| ||||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  15893045 agatgaaacaacagttgccggttcaacaacaacaacaacatcaacaagctagacctactttccctccgataccaatgttgtatgctgagttgcttc 15892950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 28339241 - 28339316
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  28339241 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 28339316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 31964792 - 31964717
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  31964792 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 31964717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 47023392 - 47023467
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  47023392 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 47023467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 50134390 - 50134315
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  50134390 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 50134315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 10396070 - 10396135
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  10396070 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgatacctatgttgtatg 10396135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 4416861 - 4416933
Alignment:
Q  248 caacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  4416861 caacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 4416933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 28116270 - 28116198
Alignment:
Q  248 caacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| ||| |||||||    
T  28116270 caacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgaattgcttc 28116198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 17985275 - 17985212
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  17985275 gttcaacaacaacaacaaaatcagcaagctagacctacttttcctcctataccaatgttgtatg 17985212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 21674630 - 21674695
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| ||||||||||    
T  21674630 cagttcaacaacaacaacaaaatcagcaagctagaccaacttttcctcctataccaatgttgtatg 21674695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 315
Target Start/End: Complemental strand, 16626990 - 16626755
Alignment:
Q  77 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatc 176  Q
    |||||||| |||||| |||||||||| ||| |||||||  | ||| | |||||||  |||||||| ||||| ||||| || || || || ||||| ||||    
T  16626990 gctactgttgcccctattaatgctgcccagttacctccgtcgtacccgtatgcacaatactctcagcatcccttctttccaccgttctatcatcagtatc 16626891  T
Q  177 ctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctag 276  Q
    || | ||||| || | ||||| ||||||||| ||||| || || ||||| | || ||| || ||| ||| |||||||||||| |||   || ||||||||    
T  16626890 ctctaccatcgggtcaacctccggtacccgttaatgccatcgttcagcaaatgcaacaacagccaccagctcaacaacaacagcag---caacaagctag 16626794  T
Q  277 acctactttccctccaataccgatgttgtatgttgagtt 315  Q
    |||||| || ||||| ||||| ||| | ||||| |||||    
T  16626793 acctacctttcctccgataccaatgatatatgtcgagtt 16626755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 17994250 - 17994132
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  17994250 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 17994151  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  17994150 ctcaggtacccgttaatgc 17994132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 4625736 - 4625853
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  4625736 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattatatcatcagtatcctttgccatcgggtcaac 4625835  T
Q  195 ctcaggtacccgtgaatg 212  Q
    ||||||||||||| ||||    
T  4625836 ctcaggtacccgttaatg 4625853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 32438863 - 32439052
Alignment:
Q  12 atggacatcacaagaagaaggaaacagaggttggaatggtatcctctggaacaggtcagcctacagctactgtcgcccctgttaatgctgctcagctacc 111  Q
    ||||||||||||||||||| || || ||||| |||||| || || |||||||   ||   | |  |||||||| || ||||| |||||||||||| | ||    
T  32438863 atggacatcacaagaagaaagatacggaggtgggaatgatagccgctggaactaatccatccaaggctactgttgctcctgtcaatgctgctcagtttcc 32438962  T
Q  112 tccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggt 201  Q
     ||  | ||| | ||||||||||||||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | |||||||||    
T  32438963 cccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 32439052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 18225130 - 18225193
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| ||||| |||||||| ||||| |||||||| ||||| ||||||||||    
T  18225130 gttcaacaacaacaacaaaatcaacaagctaggcctaccttccctcctataccaatgttgtatg 18225193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 24328098 - 24328161
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| ||||||||||| || || || |||||||| ||||||||||||||||    
T  24328098 gttcaacaacaacaacaaaatcagcaagccaggccaaccttccctcctataccgatgttgtatg 24328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 4893032 - 4893108
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggt 201  Q
    ||||||||||||||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | |||||||||    
T  4893032 tatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 4893108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 5652179 - 5652297
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||| ||||| ||| || | ||    
T  5652179 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcgtttgcaatcgggtcaac 5652278  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  5652279 ctcaggtacccgttaatgc 5652297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 5013651 - 5013712
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgta 306  Q
    ||||||||||||||||| ||||||||||| || || ||||| ||||| ||||| ||||||||    
T  5013651 gttcaacaacaacaacaaaatcagcaagccaggccaacttttcctcctataccaatgttgta 5013712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 8211447 - 8211636
Alignment:
Q  12 atggacatcacaagaagaaggaaacagaggttggaatggtatcctctggaacaggtcagcctacagctactgtcgcccctgttaatgctgctcagctacc 111  Q
    ||||||| ||||||||||| ||||| || || || ||||| ||  ||||| | |||||  | |  |||||||| || ||| | ||||| |||||  | ||    
T  8211447 atggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagctcaaatgcc 8211546  T
Q  112 tccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggt 201  Q
    |||  ||||| | ||||| ||||||||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | |||||||||    
T  8211547 tccgtcatacccatatgcgccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 8211636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 28116390 - 28116303
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 218  Q
    ||||| ||||| ||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  28116390 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 28116303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 29665418 - 29665331
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 218  Q
    ||||||||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | |||||| || ||||| ||||| ||||    
T  29665418 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgtcaatgcaattg 29665331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 201
Target Start/End: Original strand, 5466810 - 5466880
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggt 201  Q
    ||||| ||||| |||||||||||||| |||||||| ||||| || ||||||||| | || | |||||||||    
T  5466810 ccgtattctcagcatccgttcttcccaccattttatcatcagtaccctttgccacccggccaacctcaggt 5466880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 218
Target Start/End: Complemental strand, 22871426 - 22871220
Alignment:
Q  12 atggacatcacaagaagaaggaaacagaggttggaatggtatcctctggaacaggtcagcctacagctactgtcgcccctgttaatgctgctcagctacc 111  Q
    ||||||| ||||||||||| ||||| || || || ||||| ||  ||||| | |||||  |||  |||||||| || ||| | ||||| |||||| | ||    
T  22871426 atggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctactgttgcacctatcaatgcagctcagatgcc 22871327  T
Q  112 tccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaat 211  Q
    |||  ||||| | |||   ||||| ||||| |||||||||||||| || ||||| ||||| || ||||||||| |||| |  ||||| || ||||| |||    
T  22871326 tccgtcatacccatatatgccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccaggccagcctcaagtgcccgtcaat 22871227  T
Q  212 gctattg 218  Q
    || ||||    
T  22871226 gcaattg 22871220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 218
Target Start/End: Complemental strand, 22886485 - 22886279
Alignment:
Q  12 atggacatcacaagaagaaggaaacagaggttggaatggtatcctctggaacaggtcagcctacagctactgtcgcccctgttaatgctgctcagctacc 111  Q
    ||||||| ||||||||||| ||||| || || || ||||| ||  ||||| | |||||  |||  |||||||| || ||| | ||||| |||||| | ||    
T  22886485 atggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctactgttgcacctatcaatgcagctcagatgcc 22886386  T
Q  112 tccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaat 211  Q
    |||  ||||| | |||   ||||| ||||| |||||||||||||| || ||||| ||||| || ||||||||| |||| |  ||||| || ||||| |||    
T  22886385 tccgtcatacccatatatgccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccaggccagcctcaagtgcccgtcaat 22886286  T
Q  212 gctattg 218  Q
    || ||||    
T  22886285 gcaattg 22886279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 201
Target Start/End: Complemental strand, 22388127 - 22387938
Alignment:
Q  12 atggacatcacaagaagaaggaaacagaggttggaatggtatcctctggaacaggtcagcctacagctactgtcgcccctgttaatgctgctcagctacc 111  Q
    ||||||||||||||||||| || || ||||| |||||| || || |||||||   ||   | |  |||||||| || ||| | |||||||||||| | ||    
T  22388127 atggacatcacaagaagaaagatacggaggtgggaatgatagccgctggaactaatccatccatggctactgttgctcctatcaatgctgctcagtttcc 22388028  T
Q  112 tccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggt 201  Q
     ||  | ||| | |||||||| |||||||| ||||||||||||||  | ||||| ||||| || ||||||||| | || | |||||||||    
T  22388027 cccgtcctacccttatgcaccatactctcagcatccgttcttcccatcgttttatcatcagtaccctttgccaccgggccaacctcaggt 22387938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 6542778 - 6542706
Alignment:
Q  248 caacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||| ||| | ||| |  ||||||| ||||| ||||| ||||| |||||||||| |||||||||||    
T  6542778 caacaacaacagcagcagcagtatactagaccaacttttcctcctataccaatgttgtatgctgagttgcttc 6542706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 21674518 - 21674558
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatca 171  Q
    ||||| ||||| ||||||||||| |||||||||||||||||    
T  21674518 ccgtattctcagcatccgttctttccgccattttaccatca 21674558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 48465740 - 48465780
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatca 171  Q
    ||||||||||| |||||||||||||| || |||||||||||    
T  48465740 ccgtactctcagcatccgttcttcccaccgttttaccatca 48465780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 51781836 - 51781876
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatca 171  Q
    ||||||||||| |||||||||||||| || |||||||||||    
T  51781836 ccgtactctcagcatccgttcttcccaccgttttaccatca 51781876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 51796925 - 51796965
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatca 171  Q
    ||||||||||| |||||||||||||| || |||||||||||    
T  51796925 ccgtactctcagcatccgttcttcccaccgttttaccatca 51796965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 6e-31; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 77 - 315
Target Start/End: Original strand, 22888292 - 22888527
Alignment:
Q  77 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatc 176  Q
    |||||||| |||||| |||||||||| ||| |||||||  | ||| | ||||| || |||||||| ||||| ||||| || ||||| || ||||| ||||    
T  22888292 gctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagtatc 22888391  T
Q  177 ctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctag 276  Q
    |||||||||| || | |||||||||| |||| |||||  | || ||||| | || ||| || ||| |||||   |||||||||||| |||| ||||||||    
T  22888392 ctttgccatcgggtcaacctcaggtaaccgttaatgccgtcgttcagcaaatgcaacaacagccaccagtt---caacaacaacagcatcaacaagctag 22888488  T
Q  277 acctactttccctccaataccgatgttgtatgttgagtt 315  Q
    |||||| |||||||| ||||| |||||||||| ||||||    
T  22888489 acctaccttccctccgataccaatgttgtatgctgagtt 22888527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 22999291 - 22999214
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  22999291 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 22999214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 15658935 - 15658860
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  15658935 gttcaacaacaacaacaaaatcagcaagctagacctactttccctccaataccgatgttatatgctgagttgcttc 15658860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 125 - 320
Target Start/End: Complemental strand, 24688452 - 24688257
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||| ||||| ||||||||||| ||||| |||||||| || ||||| || ||| ||||| | || | |||||| |||||||| ||| | ||||  || |    
T  24688452 tatgcgccgtattctcaacatcctttctttccgccattctatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatacaattgctcaac 24688353  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||| |  ||| ||     ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||    
T  24688352 agatgaaacaacagttgccagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatattgtatgctgagttgcttc 24688257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 33777474 - 33777549
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  33777474 gttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 33777549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 320
Target Start/End: Original strand, 41674589 - 41674771
Alignment:
Q  138 ctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagccacagca 237  Q
    |||| ||||| ||||| ||||||||||||||||| || ||| ||||| | || |||||||| |||||||| ||||| ||||  || |||| |  ||| ||    
T  41674589 ctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtccacctcaagtacccgtcaatgcaattgcccaacagatgaaacaaca 41674688  T
Q  238 accatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
         | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| ||| |||||||    
T  41674689 gttgccggttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgaattgcttc 41674771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 11549339 - 11549416
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  11549339 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 11549416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 23718165 - 23718088
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  23718165 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 23718088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 23752627 - 23752550
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  23752627 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 23752550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 320
Target Start/End: Original strand, 23892073 - 23892268
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||| ||||||||||| ||||| ||||| ||  |||| || ||||| |||||||||||||| || | ||||||||||||||| ||||| || || ||||    
T  23892073 tatgcgccgtactctcagcatcctttctttccaacattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgtcaatgccatcgttcagc 23892172  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    | | || ||| || ||| | |||||||||||||||||  |||| |||||||||||||| || ||||| ||||| ||  ||||||  ||||||||||    
T  23892173 aaatgcaacaacagccaccggttcaacaacaacaacaacatcaacaagctagacctacctttcctccgataccaatcatgtatgccgagttgcttc 23892268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 9548832 - 9548643
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  || |||| |     
T  9548832 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattgctcaacagatga 9548733  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     |  |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| ||| |||||||    
T  9548732 aacaacagatgccgattcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgaattgcttc 9548643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 2511038 - 2511113
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  2511038 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 2511113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 5637897 - 5637972
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  5637897 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 5637972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 8665650 - 8665575
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  8665650 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 8665575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 9317438 - 9317513
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  9317438 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 9317513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 12132142 - 12132217
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  12132142 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 12132217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 15759032 - 15758957
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  15759032 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 15758957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 26480379 - 26480454
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  26480379 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 26480454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 30152005 - 30152080
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  30152005 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 30152080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 30168456 - 30168531
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  30168456 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 30168531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 30934626 - 30934695
Alignment:
Q  251 caacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  30934626 caacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 30934695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 320
Target Start/End: Original strand, 24969891 - 24970080
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||| ||||| ||||| ||||| ||||| |||||||| || ||||| ||||| |||||| | || | ||||||||||||||| ||||| ||||  || |    
T  24969891 tatgcgccgtattctcagcatcctttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgttaatgcaattgctcaac 24969990  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||| |  ||| || |   | ||||||||||||||      ||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  24969991 agatgaaacaacagctgccggttcaacaacaaca------tcaacaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 24970080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 308
Target Start/End: Original strand, 25198788 - 25199079
Alignment:
Q  14 ggacatcacaagaagaaggaaacagaggttggaatggtatcctctggaacaggtcagcctacagctactgtcgcccctgttaatgctgctcagctacctc 113  Q
    |||||||| ||||||||||||||||| || || ||||||||| | ||| | |||||  | |  |||||||| || ||| |||||||| | ||  | ||||    
T  25198788 ggacatcataagaagaaggaaacagaagtagggatggtatccgccggagccggtcaatccatggctactgttgctcctattaatgcttcccaattgcctc 25198887  T
Q  114 caccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 213  Q
    |  | ||| | ||||| ||||||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||||||||||| ||| || ||    
T  25198888 cgtcgtacccatatgcgccgtactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtactcgttaacgc 25198987  T
Q  214 tattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
      | || ||||| | || ||| || ||| |||||   |||||||||||| |||| |||||||||||||| ||  |||| ||||| ||||||||||    
T  25198988 cgtcgttcagcaaatgcaacaacagccaccagtt---caacaacaacagcatcaacaagctagacctaccttttctccgataccaatgttgtatg 25199079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 6874295 - 6874367
Alignment:
Q  248 caacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||| ||||||    
T  6874295 caacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagctgcttc 6874367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 18375587 - 18375524
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  18375587 gttcaacaacaacaacaaaatcagcaagctagacctacttttcctcctataccaatgttgtatg 18375524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 33516343 - 33516406
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| |||||||||||||| |||||||| ||||| ||||| ||||||||||    
T  33516343 gttcaacaacaacaacaaaatcagcaagctaggcctacttttcctcctataccaatgttgtatg 33516406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 11325634 - 11325752
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||  |||| ||    
T  11325634 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccattgggacaac 11325733  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  11325734 ctcaggtacccgttaatgc 11325752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 13184970 - 13184852
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  13184970 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 13184871  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  13184870 ctcaggtacccgttaatgc 13184852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 13440816 - 13440698
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  13440816 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 13440717  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  13440716 ctcaggtacccgttaatgc 13440698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 33877087 - 33877205
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  33877087 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 33877186  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  33877187 ctcaggtacccgttaatgc 33877205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 33292282 - 33292471
Alignment:
Q  12 atggacatcacaagaagaaggaaacagaggttggaatggtatcctctggaacaggtcagcctacagctactgtcgcccctgttaatgctgctcagctacc 111  Q
    ||||||||||||||||||| || || ||||| |||||| || || |||||||   ||   | |  |||||||| || ||| | |||||||||||| | ||    
T  33292282 atggacatcacaagaagaaagatacggaggtgggaatgatagccgctggaactaatccatccaaggctactgttgctcctatcaatgctgctcagtttcc 33292381  T
Q  112 tccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggt 201  Q
     ||  | ||| | ||||||||||||||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | |||||||||    
T  33292382 cccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 33292471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 29967241 - 29967178
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| ||||||||||| || || || |||||||| ||||| ||||||||||    
T  29967241 gttcaacaacaacaacaaaatcagcaagccaggccaaccttccctcctataccaatgttgtatg 29967178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 30029402 - 30029465
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| ||||||||||| || || || |||||||| ||||| ||||||||||    
T  30029402 gttcaacaacaacaacaaaatcagcaagccaggccaaccttccctcctataccaatgttgtatg 30029465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 3789399 - 3789486
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 218  Q
    ||||||||||| |||||||||||||| || ||||| ||||| || ||||||||| | || |  |||||||| ||||| ||||| ||||    
T  3789399 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccagcctcaggtgcccgtcaatgcaattg 3789486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 13325133 - 13325080
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgcca 184  Q
    ||||| |||||||||||||||||||| || ||||| ||||| || |||||||||    
T  13325133 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 13325080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 24681310 - 24681363
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgcca 184  Q
    ||||| ||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  24681310 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcca 24681363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 24723837 - 24723890
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgcca 184  Q
    ||||| ||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  24723837 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcca 24723890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 28649099 - 28649152
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgcca 184  Q
    ||||| ||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  28649099 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcca 28649152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 34616532 - 34616580
Alignment:
Q  272 gctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    |||||||| ||||| ||||| ||||| |||||||||| |||||||||||    
T  34616532 gctagaccaacttttcctcctataccaatgttgtatgctgagttgcttc 34616580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 37671655 - 37671583
Alignment:
Q  248 caacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||| ||| | ||| |  ||||||| ||||| ||||| ||||| |||||||||| |||||||||||    
T  37671655 caacaacaacagcagcagcagtatactagaccaacttttcctcctataccaatgttgtatgctgagttgcttc 37671583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 37754970 - 37755042
Alignment:
Q  248 caacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||| ||| | ||| |  ||||||| ||||| ||||| ||||| |||||||||| |||||||||||    
T  37754970 caacaacaacagcagcagcagtatactagaccaacttttcctcctataccaatgttgtatgctgagttgcttc 37755042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 37771159 - 37771087
Alignment:
Q  248 caacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||| ||| | ||| |  ||||||| ||||| ||||| ||||| |||||||||| |||||||||||    
T  37771159 caacaacaacagcagcagcagtatactagaccaacttttcctcctataccaatgttgtatgctgagttgcttc 37771087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 40473727 - 40473649
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaa---gctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    |||||||||||||||||| | ||||||    | ||||| ||||| ||||| ||||||||||| |||| |||||||||||    
T  40473727 gttcaacaacaacaacagcagcagcaatataccagaccaacttttcctcctataccgatgttatatgctgagttgcttc 40473649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 40473841 - 40473801
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatca 171  Q
    ||||||||||| |||||||||||||| || |||||||||||    
T  40473841 ccgtactctcagcatccgttcttcccaccgttttaccatca 40473801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 320
Target Start/End: Complemental strand, 40467 - 40272
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||| ||||| ||||| ||||| ||||| | |||||| || ||||| || ||||||||| | || | ||||||||||||||| ||||| ||||  || |    
T  40467 tatgcgccgtattctcagcatcctttctttctgccattctatcatcagtaccctttgccaccgggtcaacctcaggtacccgtaaatgcaattgctcaac 40368  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||| |  ||| ||     | ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  40367 agatgaaacaacagttgccggttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 40272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 47265 - 47188
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  47265 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 47188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 77 - 320
Target Start/End: Original strand, 29573 - 29816
Alignment:
Q  77 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatc 176  Q
    |||||||| || ||| |||||||||| ||  | |||||| | ||| | ||||| ||||| ||||| ||||| ||||| |||||||| || ||||| || |    
T  29573 gctactgttgctcctattaatgctgcccaaatgcctccatcgtacccgtatgcgccgtattctcagcatcctttctttccgccattctatcatcagtacc 29672  T
Q  177 ctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctag 276  Q
    |||||||| | || | |||||| |||||||| ||||| || |  || |||| |  ||| ||     | |||||||||||||||||  |||| ||||||||    
T  29673 ctttgccaccgggtcaacctcaagtacccgttaatgcaatagctcaacagatgaaacaacagttgccggttcaacaacaacaacaacatcaacaagctag 29772  T
Q  277 acctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  29773 acctactttccctccgataccgatgttgtatgctgagttgcttc 29816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 320
Target Start/End: Complemental strand, 23128953 - 23128758
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||| ||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || |  || |    
T  23128953 tatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaac 23128854  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||| |  ||| ||     ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  23128853 agatgaaacaacagttgccagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 23128758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 320
Target Start/End: Complemental strand, 27434831 - 27434636
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||| ||||||||||| ||||| ||||| || ||||| || ||||| || ||||||||| | || | |||||| |||||||| ||||| ||||  || |    
T  27434831 tatgcgccgtactctcagcatcctttctttccaccattctatcatcagtaccctttgccaccgggtcaacctcaagtacccgttaatgcaattgctcaac 27434732  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||| |  ||| ||     | ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  27434731 agatgaaacaacagttgccggttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 27434636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 315
Target Start/End: Complemental strand, 21703596 - 21703361
Alignment:
Q  77 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatc 176  Q
    |||||||| |||||| ||||||||||  || |||||||  | ||| | ||||| || |||||||| ||||| ||||| || ||||| || ||||| ||||    
T  21703596 gctactgttgcccctattaatgctgcctagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagtatc 21703497  T
Q  177 ctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctag 276  Q
    |||||||||| || | ||||||||||||||| |||||  | || || || | || ||| || ||| |||||   |||||||||||| |||| ||||||||    
T  21703496 ctttgccatcgggtcaacctcaggtacccgttaatgccgtcgttcaacaaatgcaacaacagccaccagtt---caacaacaacagcatcaacaagctag 21703400  T
Q  277 acctactttccctccaataccgatgttgtatgttgagtt 315  Q
    |||||| |||||||| ||||| |||||||||| ||||||    
T  21703399 acctaccttccctccgataccaatgttgtatgctgagtt 21703361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 34286328 - 34286403
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  34286328 gttcaacaacaacaacaaaatcagcaagctagacctactttccctccaataccgatgttatatgctgagttgcttc 34286403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 34291388 - 34291463
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  34291388 gttcaacaacaacaacaaaatcagcaagctagacctactttccctccaataccgatgttatatgctgagttgcttc 34291463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 12655514 - 12655591
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  12655514 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 12655591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 20837890 - 20837967
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  20837890 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 20837967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 28882186 - 28882263
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  28882186 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 28882263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 131 - 320
Target Start/End: Original strand, 34279309 - 34279498
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||  || |||| |     
T  34279309 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgctcaacagatga 34279408  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  34279409 aacaacagttgccggttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 34279498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 320
Target Start/End: Original strand, 32049658 - 32049847
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||  || |||| |     
T  32049658 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgctcaacagatga 32049757  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  32049758 aacaacagatgccggttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 32049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 11635450 - 11635378
Alignment:
Q  248 caacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  11635450 caacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 11635378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 12 - 320
Target Start/End: Complemental strand, 21677682 - 21677374
Alignment:
Q  12 atggacatcacaagaagaaggaaacagaggttggaatggtatcctctggaacaggtcagcctacagctactgtcgcccctgttaatgctgctcagctacc 111  Q
    ||||||| ||||||||||| ||||| || || || ||||||||  ||||| | |||||  | |  |||||||| || ||| | ||||| |||||  | ||    
T  21677682 atggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcc 21677583  T
Q  112 tccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaat 211  Q
    ||| |||||| | |||   ||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| |||    
T  21677582 tccgccatacccatatatgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaat 21677483  T
Q  212 gctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttg 311  Q
    || ||||  || |||| |  ||| ||     | ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| ||    
T  21677482 gcgattgcccaacagatgaaacaacagatgccggttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctg 21677383  T
Q  312 agttgcttc 320  Q
    |||||||||    
T  21677382 agttgcttc 21677374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 22926295 - 22926220
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  22926295 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 22926220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 34861654 - 34861729
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  34861654 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 34861729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 37686176 - 37686101
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  37686176 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 37686101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 37701441 - 37701366
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  37701441 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 37701366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 13936925 - 13936736
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||  || |||| |     
T  13936925 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacagatga 13936826  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| || |   | |||||||||||||| || | ||||||||| ||||||||||||||||| ||||||||||| |||| |||||||||||    
T  13936825 aacaacagctgccggttcaacaacaacagcaaagtcagcaagccagacctactttccctccgataccgatgttatatgctgagttgcttc 13936736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 131 - 320
Target Start/End: Original strand, 37925353 - 37925542
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | |||||| || ||||| ||||| ||||  || |||| |     
T  37925353 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgtcaatgcgattgcccaacagatga 37925452  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| |||||||||||||| |||||||||||||| ||||| ||||| |||| |||||||||||    
T  37925453 aacaacagatgccggttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccaatgttatatgctgagttgcttc 37925542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 11641639 - 11641567
Alignment:
Q  248 caacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||    
T  11641639 caacaacaacaacaaaatcagcaagctagacctactttccctccgatacagatgttatatgctgagttgcttc 11641567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 308
Target Start/End: Original strand, 27118515 - 27118725
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| |  |||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  27118515 aatgctgctcagctacctccgtcgtacccgcatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 27118614  T
Q  195 ctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaat 294  Q
    ||||||||||||| |||||  | || ||||  | || ||| || ||  ||| |||||||| ||| |||   || |||||||||||||| |||||||| ||    
T  27118615 ctcaggtacccgttaatgccgtcgttcagcgaatgcaacaacagcctccagctcaacaacgacagcag---caacaagctagacctaccttccctccgat 27118711  T
Q  295 accgatgttgtatg 308  Q
    ||||||||||||||    
T  27118712 accgatgttgtatg 27118725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 31891742 - 31891624
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| |||| ||    
T  31891742 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggacaac 31891643  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  31891642 ctcaggtacccgttaatgc 31891624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 16829605 - 16829542
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| |||||||||||||| |||||||| ||||| ||||| ||||||||||    
T  16829605 gttcaacaacaacaacaaaatcagcaagctaggcctacttttcctcctataccaatgttgtatg 16829542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 16891876 - 16891939
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| |||||||||||||| |||||||| ||||| ||||| ||||||||||    
T  16891876 gttcaacaacaacaacaaaatcagcaagctaggcctacttttcctcctataccaatgttgtatg 16891939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 19416766 - 19416703
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| ||||||||||| || || ||||||||||| ||||||||||||||||    
T  19416766 gttcaacaacaacaacaaaatcagcaagccaggccaactttccctcctataccgatgttgtatg 19416703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 3784481 - 3784599
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  3784481 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 3784580  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  3784581 ctcaggtacccgttaatgc 3784599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 34156838 - 34156956
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  34156838 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 34156937  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  34156938 ctcaggtacccgttaatgc 34156956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 31876255 - 31876316
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgta 306  Q
    ||||||||||||||||| |||||||||||||| |||||||| ||||| ||||| ||||||||    
T  31876255 gttcaacaacaacaacaaaatcagcaagctaggcctacttttcctcctataccaatgttgta 31876316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 34303717 - 34303600
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  34303717 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 34303618  T
Q  195 ctcaggtacccgtgaatg 212  Q
    ||||||||||||| ||||    
T  34303617 ctcaggtacccgttaatg 34303600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 16163426 - 16163544
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| ||| |||||||||| || | ||    
T  16163426 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtattctttgccatcgggtcaac 16163525  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  16163526 ctcaggtacccgttaatgc 16163544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 297
Target Start/End: Complemental strand, 19456853 - 19456636
Alignment:
Q  77 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatc 176  Q
    |||||||| |||||| |||||||||| ||| |||||||  | ||| | ||||| |  |||| ||| ||||| ||||| || ||||| || ||||| ||||    
T  19456853 gctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgcaatactttcagcatcctttctttccaccattctatcatcagtatc 19456754  T
Q  177 ctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctag 276  Q
    || | ||||| || | ||||||||| ||||| ||||| || ||  |||| | || ||| || ||| ||| |||||||||||| |||   || ||||||||    
T  19456753 ctctaccatcgggtcaacctcaggtgcccgttaatgccatcgtttagcaaatgcaacaacagccaccagctcaacaacaacagcag---caacaagctag 19456657  T
Q  277 acctactttccctccaatacc 297  Q
    |||||| || ||||| |||||    
T  19456656 acctacctttcctccgatacc 19456636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 201
Target Start/End: Original strand, 37375021 - 37375091
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggt 201  Q
    ||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| | || | |||||||||    
T  37375021 ccgtactctcagcatccgttcttcccgccgttttatcatcagtaccctttgccaccgggccaacctcaggt 37375091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 11635570 - 11635483
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 218  Q
    ||||| ||||| ||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  11635570 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 11635483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 11641759 - 11641672
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 218  Q
    ||||| ||||| ||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  11641759 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 11641672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 12716986 - 12716933
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgcca 184  Q
    ||||| ||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  12716986 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcca 12716933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 39052209 - 39052169
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatca 171  Q
    ||||||||||| |||||||||||||| || |||||||||||    
T  39052209 ccgtactctcagcatccgttcttcccaccgttttaccatca 39052169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 40233359 - 40233399
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatca 171  Q
    ||||||||||| |||||||||||||| || |||||||||||    
T  40233359 ccgtactctcagcatccgttcttcccaccgttttaccatca 40233399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 2137498 - 2137421
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  2137498 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 2137421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 27609144 - 27609067
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  27609144 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 27609067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 125 - 320
Target Start/End: Original strand, 16277412 - 16277607
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||| ||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || |  || |    
T  16277412 tatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaac 16277511  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||| |  ||| ||     ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  16277512 agatgaaacaacagttgccagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 16277607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 125 - 320
Target Start/End: Original strand, 16283307 - 16283502
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||| ||||||||||| ||||| ||||| |||||||| || ||| | |||||||||||| |||| | ||||||||||||| | ||||| ||||  || |    
T  16283307 tatgcgccgtactctcagcatcctttctttccgccattctatcattagtatcctttgccaccaggtcaacctcaggtacccattaatgcaattgctcaac 16283406  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||| |  ||| ||     | |||||||||||||||||  |||| |||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  16283407 agatgaaacaacagttgccggttcaacaacaacaacaacatcaacaagctagacctaccttccctccgataccgatgttgtatgctgagttgcttc 16283502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 19688076 - 19688151
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  19688076 gttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttc 19688151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 320
Target Start/End: Complemental strand, 31490095 - 31489912
Alignment:
Q  137 tctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagccacagc 236  Q
    ||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | |||||| || ||||| ||||| ||||  || |||| |  |||||    
T  31490095 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgtcaatgcgattgcccaacagatgaaacagc 31489996  T
Q  237 aaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    |     | ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  31489995 agatgccggttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 31489912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 19208597 - 19208522
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  19208597 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 19208522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 28362192 - 28362117
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  28362192 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 28362117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 131 - 320
Target Start/End: Original strand, 31354388 - 31354577
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | ||||||||| || || ||||| || |  || |||   |    
T  31354388 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcctgtcaatgccatcgctcaacaggtac 31354487  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||||   | ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||  ||||||||||    
T  31354488 aacatcaactgccggttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgccgagttgcttc 31354577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 19674422 - 19674494
Alignment:
Q  248 caacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  19674422 caacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 19674494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 14557608 - 14557677
Alignment:
Q  251 caacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||| |||||||||||    
T  14557608 caacaacaacaaaatcagcaagctagacctactttccctccgataccaatgttatatgctgagttgcttc 14557677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 44562932 - 44563050
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| |||| ||    
T  44562932 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggacaac 44563031  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  44563032 ctcaggtacccgttaatgc 44563050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 9354453 - 9354571
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  9354453 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 9354552  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  9354553 ctcaggtacccgttaatgc 9354571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 19659423 - 19659305
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  19659423 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 19659324  T
Q  195 ctcaggtacccgtgaatgc 213  Q
    ||||||||||||| |||||    
T  19659323 ctcaggtacccgttaatgc 19659305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 33258701 - 33258764
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| ||||||||||| || || || |||||||| ||||||||||||||||    
T  33258701 gttcaacaacaacaacaaaatcagcaagccaggccaaccttccctcctataccgatgttgtatg 33258764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 18710450 - 18710532
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 213  Q
    ||||||||||| |||||||||||||| || ||||| ||||| || ||||||||| | || | ||||||||| ||||| |||||    
T  18710450 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcccgtcaatgc 18710532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 19518494 - 19518441
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgcca 184  Q
    ||||| ||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  19518494 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcca 19518441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 3329741 - 3329669
Alignment:
Q  248 caacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||| ||| | ||| |  ||||||| ||||| ||||| ||||| |||||||||| |||||||||||    
T  3329741 caacaacaacagcagcagcagtatactagaccaacttttcctcctataccaatgttgtatgctgagttgcttc 3329669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 18710591 - 18710639
Alignment:
Q  272 gctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    |||||||| ||||| ||||| ||||| |||||||||| |||||||||||    
T  18710591 gctagaccaacttttcctcctataccaatgttgtatgctgagttgcttc 18710639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 27268 - 27345
Alignment:
Q  243 cagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  27268 cagttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttc 27345  T

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Target: scaffold2173 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold2173
Description:

Target: scaffold2173; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 1 - 75
Alignment:
Q  188 ggaccacctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacag 262  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||||||||    
T  1 ggaccacctcaggtacccgtgaatgctattgtgcaacagaagccacaacaaccaccagttcagcaacaacaacag 75  T

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Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 41793700 - 41793511
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||  |  |||| |     
T  41793700 ccgtattctcaacatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgctccacagatga 41793601  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  41793600 aacaacagatgccggttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 41793511  T

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Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 10962647 - 10962722
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  10962647 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 10962722  T

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Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 28584958 - 28585033
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  28584958 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 28585033  T

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Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 51638195 - 51638258
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| | ||||| ||||||||||    
T  51638195 gttcaacaacaacaacaaaatcagcaagctaggcctactttcccttcgataccaatgttgtatg 51638258  T

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Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 297
Target Start/End: Complemental strand, 20340760 - 20340561
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  20340760 aatgctgctcagctacctccgtcgtacccgtacgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 20340661  T
Q  195 ctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaat 294  Q
    ||||||||||||| |||||  | || || || | || ||| || ||  ||| |   |||||||||||| ||||||||||||||||||| || ||||| ||    
T  20340660 ctcaggtacccgtcaatgccgtcgttcaacaaatgcaacaacagcctccagct---caacaacaacagcatcagcaagctagacctacctttcctccgat 20340564  T

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Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 213
Target Start/End: Original strand, 20460917 - 20461053
Alignment:
Q  77 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatc 176  Q
    |||||| | |||||| |||||||||| ||| ||||||| || ||| | ||||| |  |||||||| ||||| ||||| || ||||| || ||||||||||    
T  20460917 gctactattgcccctattaatgctgcccagttacctccgccgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcaatatc 20461016  T
Q  177 ctttgccatcaggaccacctcaggtacccgtgaatgc 213  Q
    || | ||||| || | ||||||||||||||| |||||    
T  20461017 ctctaccatcgggtcaacctcaggtacccgttaatgc 20461053  T

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Target: scaffold0350 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 7517 - 7442
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  7517 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 7442  T

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Target: scaffold0159 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 9344 - 9269
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  9344 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 9269  T

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Target: scaffold0159; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 19993 - 20068
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  19993 gttcaacaacaacaacaaaatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttc 20068  T

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Target: scaffold0029 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 522 - 332
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagcagaagc 230  Q
    ||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  || |||| |     
T  522 ccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaattgctcaacagatga 423  T
Q  231 cacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg-ttgagttgcttc 320  Q
     ||| ||     | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  422 aacaacagttgccggttcaacaacaacaacaaaatcagcaagctagacctactttccctccgataccgatgttatatgctttagttgcttc 332  T

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Target: scaffold0237 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 15208 - 15145
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  15208 gttcaacaacaacaacaaaatcagcaagctagacctacttttcctcctataccaatgttgtatg 15145  T

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Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 308
Target Start/End: Original strand, 30311 - 30493
Alignment:
Q  125 tatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcagc 224  Q
    ||||| ||||| ||||| ||||| ||||| ||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || |  || |    
T  30311 tatgcgccgtattctcagcatcccttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaac 30410  T
Q  225 agaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||| |  ||| ||     ||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  30411 agatgaaacaacagttgccagttcaacaacaacaacaaaatcagcaagctagacctacttt-cctcctataccaatgttgtatg 30493  T

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Target: scaffold0124; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 213
Target Start/End: Original strand, 20222 - 20358
Alignment:
Q  77 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatc 176  Q
    |||||||| |||||| |||||||||| ||| |||||||  | ||| | ||||| || |||||||| ||||| ||||| ||  |||| || ||||| ||||    
T  20222 gctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccatcattctatcatcagtatc 20321  T
Q  177 ctttgccatcaggaccacctcaggtacccgtgaatgc 213  Q
    |||||||||| || | ||||||||||||||| |||||    
T  20322 ctttgccatcgggtcaacctcaggtacccgttaatgc 20358  T

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Target: scaffold0144 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 26480 - 26417
Alignment:
Q  245 gttcaacaacaacaacagaatcagcaagctagacctactttccctccaataccgatgttgtatg 308  Q
    ||||||||||||||||| |||||||||||||| |||||||| ||||| ||||| ||||||||||    
T  26480 gttcaacaacaacaacaaaatcagcaagctaggcctacttttcctcctataccaatgttgtatg 26417  T

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Target: scaffold0260 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 297
Target Start/End: Complemental strand, 3083 - 2884
Alignment:
Q  95 aatgctgctcagctacctccaccatactcctatgcaccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccac 194  Q
    ||||||||||||||||||||  | ||| | || || |  |||||||| ||||| ||||| || ||||| || ||||| |||||||||||||| || | ||    
T  3083 aatgctgctcagctacctccgtcgtacccgtacgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 2984  T
Q  195 ctcaggtacccgtgaatgctattgtgcagcagaagccacagcaaccatcagttcaacaacaacaacagaatcagcaagctagacctactttccctccaat 294  Q
    ||||||||||||| |||||  | || || || | || ||| || ||  ||| |   |||||||||||| ||||||||||||||||||| || ||||| ||    
T  2983 ctcaggtacccgtcaatgccgtcgttcaacaaatgcaacaacagcctccagct---caacaacaacagcatcagcaagctagacctacctttcctccgat 2887  T

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Target: scaffold0336 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 201
Target Start/End: Original strand, 8096 - 8166
Alignment:
Q  131 ccgtactctcaacatccgttcttcccgccattttaccatcaatatcctttgccatcaggaccacctcaggt 201  Q
    ||||| ||||| |||||||||||||| || ||||| ||||| |||||||||||| |||| | |||||||||    
T  8096 ccgtattctcagcatccgttcttcccaccgttttatcatcagtatcctttgccaccaggccaacctcaggt 8166  T

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Target: scaffold0099 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 320
Target Start/End: Complemental strand, 47072 - 47019
Alignment:
Q  269 caagctagacctacttt-ccctccaatacc-gatgttgtatgttgagttgcttc 320  Q
    ||||||||||||||||| |||||| ||||| ||||||||||| |||||||||||    
T  47072 caagctagacctacttttccctccgatacccgatgttgtatgctgagttgcttc 47019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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